# terms

id: PR:O74982
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cid2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caffeine-induced death protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.04","synonyms":[{"name":"Spom972h-cid2","type":"exact"}],"termid":"PR:O74982"}


id: GO:0048725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cibarial fish-trap bristle over time, from its formation to the mature structure. A cibarial fish-trap bristle is a sensory bristle on the anterior plate of the cibarium.","definition_xrefs":["GOC:rc","FBbt:00004136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chaeta development","termid":"GO:0022416"},{"relation_name":"part_of","term_name":"clypeo-labral disc development","termid":"GO:0035213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cibarial fish-trap bristle development","synonyms":[{"name":"fish-trap bristle development","type":"exact"}],"termid":"GO:0048725"}


id: GO:0102251
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10'-apo-beta-carotenal + O2 = 13-apo-beta-carotenone + 4-methylocta-2,4,6-trienedial.","definition_xrefs":["GOC:pz","EC:1.13.11.70"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"all-trans-beta-apo-10'-carotenal cleavage oxygenase activity","secondary_identifiers":["RHEA:26401","MetaCyc:RXN-12393"],"termid":"GO:0102251"}


id: MOD:00677
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an hydroxyl group.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon oxygenated residue","termid":"MOD:00679"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxylated residue","synonyms":[{"name":"HyRes","type":"exact"},{"name":"Hydroxylation (of delta C of Lysine, beta C of Tryptophan, C3 or C4 of Proline, beta C of Aspartate)","type":"exact"}],"termid":"MOD:00677"}


id: PBO:0085360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoprotein involved in vacuole inheritance; degraded in late M phase of the cell cycle; acts as a vacuole-specific receptor for myosin Myo2p; involved in regulation of asymmetric inheritance of aggregated/misfolded proteins and age reset","termid":"PBO:0085360"}


id: GO:0043602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nitrates, inorganic or organic salts and esters of nitric acid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"nitrate metabolic process","termid":"GO:0042126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"nitrate catabolic process","synonyms":[{"name":"nitrate disassimilation","type":"exact"},{"name":"nitrate dissimilation","type":"exact"}],"termid":"GO:0043602"}


id: _global:has_output
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"p has output c iff c is a participant in p, c is present at the end of p, and c is not present in the same state at the beginning of p.","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"has_participant","termid":"_global:has_participant"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_output","secondary_identifiers":["RO:0002234"],"termid":"_global:has_output"}


id: PBO:0052260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 2A","termid":"PBO:0052260"}


id: PBO:0040978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein like","termid":"PBO:0040978"}


id: PBO:0067552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 703, pseudogene","termid":"PBO:0067552"}


id: PBO:0046194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELN antisense RNA 1","termid":"PBO:0046194"}


id: SO:0000800
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A multi-chromosome duplication aberration generated by reassortment of other aberration components.","definition_xrefs":["FB:gm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assortment_derived_variation","termid":"SO:0001504"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assortment_derived_duplication","synonyms":[{"name":"assortment derived duplication","type":"exact"}],"termid":"SO:0000800"}


id: MONDO:0000339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A paralytic poliomyelitis in which the site of paralysis is the spinal cord.","direct_ancestors":[{"relation_name":"is_a","term_name":"paralytic poliomyelitis","termid":"MONDO:0000341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spinal polio","secondary_identifiers":["DOID:0050513"],"termid":"MONDO:0000339","xrefs":{"Monarch":{"xref_id":"0000339"}}}


id: FYPO:0003007
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to caffeine is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein level during cellular response to caffeine","synonyms":[{"name":"decreased protein accumulation during cellular response to caffeine","type":"related"},{"name":"decreased protein level during cellular response to caffeine during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to caffeine during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to caffeine","type":"exact"}],"termid":"FYPO:0003007"}


id: MONDO:1010738
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any severe combined immunodeficiency disease in dogs in which the cause of the disease is a mutation in the RAG1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"severe combined immunodeficiency disease, dog","termid":"MONDO:1011596"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"severe combined immunodeficiency disease, RAG1-related, dog","secondary_identifiers":["OMIA:001574-9615"],"synonyms":[{"name":"T-B-NK+ SCID","type":"exact"}],"termid":"MONDO:1010738","xrefs":{"Monarch":{"xref_id":"1010738"}}}


id: MONDO:1012878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cerebellar ataxia that occurs in dogs due to a mutation in the SELENOP gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar ataxia, dog","termid":"MONDO:1012957"},{"relation_name":"is_a","term_name":"hereditary cerebellar ataxia, non-human animal","termid":"MONDO:1012960"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar ataxia, SELENOP-related, dog","secondary_identifiers":["OMIA:002367-9615"],"synonyms":[{"name":"CACA","type":"exact"},{"name":"CNS atrophy with cerebellar ataxia","type":"related"},{"name":"ataxia, cerebellar, SELENOP-related, dog","type":"exact"}],"termid":"MONDO:1012878","xrefs":{"Monarch":{"xref_id":"1012878"}}}


id: PBO:0074285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT3 antisense RNA 2","termid":"PBO:0074285"}


id: MONDO:0006704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Conditions characterized by loss or dysfunction of myelin (see myelin sheath) in the brain, spinal cord, or optic nerves secondary to autoimmune mediated processes. This may take the form of a humoral or cellular immune response directed toward myelin or oligodendroglia associated autoantigens.","definition_xrefs":["MESH:D020278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"CNS demyelinating autoimmune disease","secondary_identifiers":["UMLS:C0751873","EFO:1000870","MEDGEN:199756"],"termid":"MONDO:0006704","xrefs":{"Monarch":{"xref_id":"0006704"}}}


id: PBO:0081149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP82 zinc finger protein","termid":"PBO:0081149"}


id: MONDO:0020309
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Landau-Kleffner syndrome (obsolete MONDO:0020309)","termid":"MONDO:0020309","xrefs":{"Monarch":{"xref_id":"0020309"}}}


id: MONDO:1030001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, juvenile absence, susceptibility to","secondary_identifiers":["OMIMPS:607631"],"termid":"MONDO:1030001","xrefs":{"Monarch":{"xref_id":"1030001"}}}


id: PBO:0044886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"density regulated re-initiation and release factor","termid":"PBO:0044886"}


id: MONDO:0014480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46,XY complete gonadal dysgenesis","termid":"MONDO:0010765"},{"relation_name":"is_a","term_name":"46,XY partial gonadal dysgenesis","termid":"MONDO:0016674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"46,XY sex reversal 9","secondary_identifiers":["UMLS:C4015129","GARD:18361","MEDGEN:863566","DOID:0111770","OMIM:616067"],"synonyms":[{"name":"46,XY SEX reversal 9","type":"related"},{"name":"46,XY Sex reversal type 9","type":"exact"},{"name":"46,XY Sex reversal, Zfpm2-related","type":"related"},{"name":"46,XY sex reversal 9","type":"exact"},{"name":"46XY sex reversal 9","type":"exact"},{"name":"SRXY9","type":"related"}],"termid":"MONDO:0014480","xrefs":{"Monarch":{"xref_id":"0014480"}}}


id: GO:0030936
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any collagen trimer that passes through a lipid bilayer membrane.","definition_xrefs":["ISBN:0721639976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen trimer","termid":"GO:0005581"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"transmembrane collagen trimer","synonyms":[{"name":"MACIT","type":"exact"}],"termid":"GO:0030936"}


id: PR:000050548
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A LIM domain-containing protein C4F6.12 (Schizosaccharomyces pombe) that has been phosphorylated at positions equivalent to Ser-3, Ser-24, Ser-31, Thr-55, Thr-64, Ser-67, Ser-97, Ser-136, and Thr-214 of the amino acid sequence represented by UniProtKB:O74398. Example: UniProtKB:O74398, Ser-3/Ser-24/Ser-31/Ser-67/Ser-97/Ser-136, MOD:00046|Thr-55/Thr-64/Thr-214, MOD:00047.","definition_xrefs":["PRO:DAN","PomBase:VW","PMID:34133210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LIM domain-containing protein C4F6.12 (Schizosaccharomyces pombe)","termid":"PR:000050547"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pxl1/Phos(S3,S24,S31,T55,T64,S67,S97,S136,T214)","pombase_gene_id":"SPBC4F6.12","synonyms":[{"name":"PomBase_original_PRO_term_name: LIM domain-containing protein C4F6.12 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-pxl1/Phos:1","type":"exact"},{"name":"UniProtKB:O74398, Ser-3/Ser-24/Ser-31/Ser-67/Ser-97/Ser-136, MOD:00046|Thr-55/Thr-64/Thr-214, MOD:00047","type":"narrow"},{"name":"pxl1/Phos(S3,S24,S31,T55,T64,S67,S97,S136,T214)","type":"exact"}],"termid":"PR:000050548"}


id: GO:0010137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ureide, the organic form of nitrogen in nitrogen fixing and transporting plants, from IMP, which is synthesized de novo during nitrogen fixation by roots.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ureide metabolic process","termid":"GO:0010135"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureide biosynthetic process","synonyms":[{"name":"ureide anabolism","type":"exact"},{"name":"ureide biosynthesis","type":"exact"},{"name":"ureide formation","type":"exact"},{"name":"ureide synthesis","type":"exact"}],"termid":"GO:0010137"}


id: MONDO:0009617
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive primary microcephaly in which the cause of the disease is a mutation in the MCPH1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"},{"relation_name":"is_a","term_name":"microcephaly with intellectual disability","termid":"MONDO:0100200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly 1, primary, autosomal recessive","secondary_identifiers":["UMLS:C1855081","DOID:0070285","GARD:15198","MESH:C565384","OMIM:251200","Orphanet:52183","MEDGEN:344415"],"synonyms":[{"name":"MCPH1","type":"related"},{"name":"MCPH1 autosomal recessive primary microcephaly","type":"exact"},{"name":"PCC syndrome","type":"related"},{"name":"autosomal recessive primary microcephaly caused by mutation in MCPH1","type":"exact"},{"name":"microcephaly 1, primary, autosomal recessive","type":"exact"},{"name":"premature chromosome condensation syndrome","type":"related"},{"name":"premature chromosome condensation with microcephaly and intellectual disability","type":"related"},{"name":"premature chromosome condensation with microcephaly and mental retardation","type":"related"}],"termid":"MONDO:0009617","xrefs":{"Monarch":{"xref_id":"0009617"}}}


id: PBO:0048006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing 6","termid":"PBO:0048006"}


id: GO:0033087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of immature T cell proliferation.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immature T cell proliferation","termid":"GO:0033083"},{"relation_name":"is_a","term_name":"negative regulation of T cell proliferation","termid":"GO:0042130"},{"relation_name":"negatively_regulates","term_name":"immature T cell proliferation","termid":"GO:0033079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of immature T cell proliferation","termid":"GO:0033087"}


id: GO:1902983
data:
  {"annotated_genes":["SJAG_05197","SJAG_00729","SJAG_00863","SJAG_00272","SJAG_04877","SJAG_00814","SJAG_02908","SJAG_02182","SJAG_01010","SJAG_03780","SJAG_00874","SJAG_04879","SJAG_02199","SJAG_02818","SJAG_04190","SJAG_03495","SJAG_02667","SJAG_01823"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66935,69018,72100,111789,114371,115425,117265],"is_not":false,"summary":null,"term":"GO:1902983"},{"annotations":[110950,97054,120054,104649,106765,106047],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903459"},{"annotations":[108816,91391,106048,95776,97055,109185,97087,106766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903460"}]},"cv_name":"biological_process","definition":"Any DNA strand elongation involved in mitotic cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA strand elongation involved in nuclear cell cycle DNA replication","termid":"GO:1902319"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00272":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_00874":null,"SJAG_01010":null,"SJAG_01823":null,"SJAG_02182":null,"SJAG_02199":null,"SJAG_02667":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_03495":null,"SJAG_03780":null,"SJAG_04190":null,"SJAG_04877":null,"SJAG_04879":null,"SJAG_05197":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0007049","GO:0006260"],"is_obsolete":false,"name":"DNA strand elongation involved in mitotic DNA replication","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"DNA strand elongation involved in mitotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1902983","terms_by_termid":{"GO:1902983":null,"GO:1903459":null,"GO:1903460":null}}


id: PBO:0004143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol-3-phosphate 5-kinase Fab1","termid":"PBO:0004143"}


id: PBO:0051856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster assembly 1 pseudogene 2","termid":"PBO:0051856"}


id: MONDO:0957382
data:
  {"annotated_genes":["SJAG_03641"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88134],"is_not":false,"summary":null,"term":"MONDO:0957382"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"fatal multiple mitochondrial dysfunctions syndrome","termid":"MONDO:0017338"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03641":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"multiple mitochondrial dysfunctions syndrome 7","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1841222","OMIM:620423","UMLS:C5830586"],"termid":"MONDO:0957382","terms_by_termid":{"MONDO:0957382":null},"xrefs":{"Monarch":{"xref_id":"0957382"}}}


id: PBO:0086599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression is cell-cycle regulated, Azf1p-dependent, and heat-inducible; YNR014W has a paralog, YMR206W, that arose from the whole genome duplication","termid":"PBO:0086599"}


id: PBO:0080113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitously transcribed tetratricopeptide repeat containing, Y-linked","termid":"PBO:0080113"}


id: PBO:0046688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein subunit beta lysine methyltransferase","termid":"PBO:0046688"}


id: PBO:0062044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 29","termid":"PBO:0062044"}


id: PBO:0082880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex; role in anaphase progression; Rtt101p-Mms22p ligase associates with replisome complex during S phase via Ctf4p; required for recovery after DSB repair; implicated in Mms22-dependent DNA repair; involved with Mms1p in nonfunctional rRNA decay; modified by the ubiquitin-like protein, Rub1p","termid":"PBO:0082880"}


id: GO:0008316
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of the vitelline membrane of an egg. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mah","GOC:sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of vitelline membrane","termid":"GO:0008316"}


id: GO:1904411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of secretory granule organization.","definition_xrefs":["GOC:TermGenie","PMID:15039777","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"regulation of secretory granule organization","termid":"GO:1904409"},{"relation_name":"positively_regulates","term_name":"secretory granule organization","termid":"GO:0033363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of secretory granule organization","synonyms":[{"name":"activation of secretory granule organisation","type":"narrow"},{"name":"activation of secretory granule organization","type":"narrow"},{"name":"activation of secretory granule organization and biogenesis","type":"related"},{"name":"positive regulation of secretory granule organisation","type":"exact"},{"name":"positive regulation of secretory granule organization and biogenesis","type":"related"},{"name":"up regulation of secretory granule organisation","type":"exact"},{"name":"up regulation of secretory granule organization","type":"exact"},{"name":"up regulation of secretory granule organization and biogenesis","type":"related"},{"name":"up-regulation of secretory granule organisation","type":"exact"},{"name":"up-regulation of secretory granule organization","type":"exact"},{"name":"up-regulation of secretory granule organization and biogenesis","type":"related"},{"name":"upregulation of secretory granule organisation","type":"exact"},{"name":"upregulation of secretory granule organization","type":"exact"},{"name":"upregulation of secretory granule organization and biogenesis","type":"related"}],"termid":"GO:1904411"}


id: PBO:0064510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit J2","termid":"PBO:0064510"}


id: PBO:0012855
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defective in sister chromatid disjoining","termid":"PBO:0012855"}


id: MONDO:0020139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete early-onset ataxia with dementia (obsolete MONDO:0020139)","secondary_identifiers":["Orphanet:98539"],"termid":"MONDO:0020139","xrefs":{"Monarch":{"xref_id":"0020139"}}}


id: GO:1901221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac chamber morphogenesis.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of cardiac chamber morphogenesis","termid":"GO:1901219"},{"relation_name":"positively_regulates","term_name":"cardiac chamber morphogenesis","termid":"GO:0003206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac chamber morphogenesis","synonyms":[{"name":"activation of cardiac chamber morphogenesis","type":"narrow"},{"name":"activation of heart chamber morphogenesis","type":"narrow"},{"name":"positive regulation of heart chamber morphogenesis","type":"exact"},{"name":"up regulation of cardiac chamber morphogenesis","type":"exact"},{"name":"up regulation of heart chamber morphogenesis","type":"exact"},{"name":"up-regulation of cardiac chamber morphogenesis","type":"exact"},{"name":"up-regulation of heart chamber morphogenesis","type":"exact"},{"name":"upregulation of cardiac chamber morphogenesis","type":"exact"},{"name":"upregulation of heart chamber morphogenesis","type":"exact"}],"termid":"GO:1901221"}


id: PATO:0000911
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A rate which is relatively low.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"rate","termid":"PATO:0000161"},{"relation_name":"is_a","term_name":"decreased process quality","termid":"PATO:0002302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased rate","synonyms":[{"name":"slow rate","type":"exact"}],"termid":"PATO:0000911"}


id: MONDO:0017093
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Unilateral focal polymicrogyria (BFPP) is the mildest sub-type of polymicrogyria (PMG), a cerebral cortical malformation characterized by excessive cortical folding and abnormal cortical layering, that affects only one small region of the brain and that may show no neurologic involvement.","definition_xrefs":["Orphanet:268947"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unilateral polymicrogyria","termid":"MONDO:0017092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"unilateral focal polymicrogyria","secondary_identifiers":["icd11.foundation:1006662041","UMLS:C5680773","DOID:0080919","MEDGEN:1842371","GARD:20981"],"termid":"MONDO:0017093","xrefs":{"Monarch":{"xref_id":"0017093"}}}


id: PBO:0083141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps 3' end of ORF HOT1/YMR172W","termid":"PBO:0083141"}


id: PBO:0088819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-methyltransferase","termid":"PBO:0088819"}


id: GO:0018454
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH + H+.","definition_xrefs":["EC:1.1.1.36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"acetoacetyl-CoA reductase activity","secondary_identifiers":["RHEA:22256","UM-BBD_reactionID:r0202"],"synonyms":[{"name":"(R)-3-hydroxyacyl-CoA dehydrogenase activity","type":"related"},{"name":"(R)-3-hydroxyacyl-CoA:NADP+ oxidoreductase activity","type":"related"},{"name":"D(-)-beta-hydroxybutyryl CoA-NADP oxidoreductase activity","type":"related"},{"name":"D-3-hydroxyacyl-CoA reductase activity","type":"related"},{"name":"NADP-linked acetoacetyl CoA reductase activity","type":"related"},{"name":"NADPH:acetoacetyl-CoA reductase activity","type":"related"},{"name":"acetoacetyl coenzyme A reductase activity","type":"related"},{"name":"beta-ketoacyl-CoA reductase","type":"broad"},{"name":"hydroxyacyl coenzyme-A dehydrogenase activity","type":"related"},{"name":"short chain beta-ketoacetyl(acetoacetyl)-CoA reductase activity","type":"related"}],"termid":"GO:0018454"}


id: PBO:0068494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 78, pseudogene","termid":"PBO:0068494"}


id: PBO:0034480
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_telomerase_template_activity","termid":"PBO:0034480"}


id: PBO:0064477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase gamma 2, accessory subunit","termid":"PBO:0064477"}


id: PBO:0035749
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_dimethylation_at_telomere_during_vegetative_growth","termid":"PBO:0035749"}


id: PBO:0000612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMN family","termid":"PBO:0000612"}


id: PBO:0117155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF497 antisense RNA 2","termid":"PBO:0117155"}


id: GO:0047732
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP-3,6-dideoxy-D-glucose = CDP-3,6-dideoxy-D-mannose.","definition_xrefs":["RHEA:21656","EC:5.1.3.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"CDP-abequose epimerase activity","secondary_identifiers":["KEGG_REACTION:R04266","MetaCyc:RXN-9160"],"synonyms":[{"name":"CDP-3,6-dideoxy-D-glucose 2-epimerase activity","type":"related"},{"name":"CDP-D-abequose 2-epimerase activity","type":"related"},{"name":"CDP-paratose 2-epimerase activity","type":"related"},{"name":"CDP-paratose epimerase activity","type":"related"},{"name":"CDP-tyvelose 2-epimerase activity","type":"related"},{"name":"cytidine diphosphate paratose-2-epimerase activity","type":"related"},{"name":"cytidine diphosphoabequose epimerase activity","type":"related"},{"name":"cytidine diphosphodideoxyglucose epimerase activity","type":"related"},{"name":"cytidine diphosphoparatose epimerase activity","type":"related"}],"termid":"GO:0047732"}


id: FYPO:0000101
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to chlorpropham. Cells stop growing (and may die) at a concentration of chlorpropham that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to chlorpropham","synonyms":[{"name":"hypersensitive to chlorpropham","type":"exact"},{"name":"sensitive to chlorpropham during mitotic cell cycle","type":"related"},{"name":"sensitive to chlorpropham during vegetative growth","type":"exact"},{"name":"sensitive to isopropyl N-3-chlorophenyl carbamate","type":"exact"},{"name":"sensitive to spindle poison","type":"broad"}],"termid":"FYPO:0000101"}


id: GO:0008944
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of oligopeptides, with broad specificity. Gly or Ala commonly occur as P1 or P1' residues, but more distant residues are also important, as is shown by the fact that Z-Gly-Pro-Gly-Gly-Pro-Ala is cleaved at the Gly-Gly bond, but not Z-(Gly)5.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete oligopeptidase A activity (obsolete GO:0008944)","synonyms":[{"name":"68000-M signalpeptide hydrolase activity","type":"related"},{"name":"oligopeptidase A activity","type":"exact"}],"termid":"GO:0008944"}


id: PBO:0080893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YTH domain family member 2 pseudogene 1","termid":"PBO:0080893"}


id: PBO:0050881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isopentenyl-diphosphate delta isomerase 2","termid":"PBO:0050881"}


id: GO:0031681
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a G-protein beta subunit.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"G-protein beta-subunit binding","synonyms":[{"name":"G-beta protein subunit binding","type":"exact"}],"termid":"GO:0031681"}


id: FYPO:0009092
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing lysine and serine as nitrogen sources.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002060","FYPO:0001985","FYPO:0000003","FYPO:0002058","FYPO:0005447","FYPO:0002057"],"is_obsolete":false,"name":"decreased cell population growth on lysine and serine nitrogen source","synonyms":[{"name":"decreased vegetative cell growth on lysine and serine nitrogen source","type":"exact"}],"termid":"FYPO:0009092"}


id: MONDO:0024472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious disease of the Mediterranean area, the Crimea, Africa, and India, caused by infection with rickettsia conorii subsp. coronorii.","definition_xrefs":["PMID:18760001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rickettsia conorii infectious disease","termid":"MONDO:0005677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"boutonneuse fever","secondary_identifiers":["icd11.foundation:1771381430","DOID:14095","MESH:D001907","Orphanet:83313","UMLS:C0006060","MedDRA:10006045","ICD9:082.1","MEDGEN:14205","SCTID:186774005","GARD:19031","Orphanet:101334"],"synonyms":[{"name":"African tick typhus","type":"exact"},{"name":"Conor and Bruch's disease","type":"exact"},{"name":"Kenya fever","type":"exact"},{"name":"Kenya tick typhus","type":"exact"},{"name":"Kenyan tick typhus","type":"exact"},{"name":"Mediterranean spotted fever","type":"exact"},{"name":"Mediterranean tick fever","type":"exact"},{"name":"Rickettsia conorii spotted fever","type":"broad"},{"name":"South African tick-bite fever","type":"exact"},{"name":"boutonneuse disease","type":"exact"},{"name":"boutonneuse fever","type":"exact"},{"name":"fievre boutonneuse","type":"exact"},{"name":"marseilles fever","type":"exact"},{"name":"tick typhus due to rickettsia conorii","type":"exact"}],"termid":"MONDO:0024472","xrefs":{"Monarch":{"xref_id":"0024472"}}}


id: MONDO:0700159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tumor arising from odontogenic epithelium and occurs in a dog.","definition_xrefs":["NCIT:C134956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine neoplasm","termid":"MONDO:0700139"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine acanthomatous epulis","termid":"MONDO:0700159","xrefs":{"Monarch":{"xref_id":"0700159"}}}


id: RO:0002264
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"c acts upstream of or within p if c is enables 'p' and p' causally upstream of or within p","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_agent_in","termid":"RO:0002500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acts_upstream_of_or_within","synonyms":[{"name":"affects","type":"related"}],"termid":"RO:0002264"}


id: MONDO:0009623
data:
  {"annotated_genes":["SJAG_00640"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89063],"is_not":false,"summary":null,"term":"MONDO:0009623"}]},"cv_name":"mondo","definition":"Nijmegen breakage syndrome is a rare genetic disease presenting at birth with microcephaly, dysmorphic facial features, becoming more noticeable with age, growth delay, and later-onset complications such as malignancies and infections.","definition_xrefs":["Orphanet:647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"DNA repair disease","termid":"MONDO:0021190"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00640":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021190"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066","MONDO:0021190"],"is_obsolete":false,"name":"Nijmegen breakage syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:3904","MedDRA:10067857","UMLS:C0398791","SCTID:234638009","DOID:7400","NANDO:1200332","NANDO:2200706","NCIT:C4692","MESH:D049932","icd11.foundation:1925662580","OMIM:251260","MEDGEN:140771"],"synonyms":[{"name":"AT V1","type":"exact"},{"name":"Berlin breakage syndrome","type":"exact"},{"name":"NBS","type":"exact"},{"name":"NBs","type":"exact"},{"name":"Nijmegen breakage syndrome","type":"exact"},{"name":"Nonsyndromal microcephaly autosomal recessive with normal intelligence","type":"related"},{"name":"Nonsyndromal microcephaly, autosomal recessive, with normal intelligence","type":"related"},{"name":"Seemanova syndrome","type":"exact"},{"name":"Seemanova syndrome 2","type":"related"},{"name":"Seemanova syndrome type 2","type":"exact"},{"name":"ataxia-telangiectasia variant V1","type":"related"},{"name":"ataxia-telangiectasia variant V2","type":"related"},{"name":"ataxia-telangiectasia, variant 1","type":"exact"},{"name":"immunodeficiency, microcephaly, and chromosomal instability","type":"related"},{"name":"immunodeficiency-microcephaly-chromosomal instability syndrome","type":"exact"},{"name":"microcephaly immunodeficiency lymphoreticuloma","type":"related"},{"name":"microcephaly with normal intelligence immunodeficiency and lymphoreticular malignancies","type":"related"},{"name":"microcephaly with normal intelligence, immunodeficiency, and lymphoreticular malignancies","type":"related"},{"name":"microcephaly, normal intelligence and immunodeficiency","type":"exact"},{"name":"microcephaly-immunodeficiency-lymphoreticuloma syndrome","type":"exact"}],"termid":"MONDO:0009623","terms_by_termid":{"MONDO:0009623":null},"xrefs":{"Monarch":{"xref_id":"0009623"}}}


id: MONDO:0013069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An optic atrophy that is caused by a mutation in the TMEM126A gene.","definition_xrefs":["OMIM:612989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"hereditary optic atrophy","termid":"MONDO:0043878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005559","MONDO:0005066"],"is_obsolete":false,"name":"autosomal recessive optic atrophy, OPA7 type","secondary_identifiers":["MESH:C567833","GARD:17143","DOID:0111437","MEDGEN:414112","Orphanet:227976","UMLS:C2751812"],"synonyms":[{"name":"OPA7","type":"related"},{"name":"TMEM126A-related optic atrophy with or without extraocular features","type":"exact"},{"name":"optic atrophy 7","type":"exact"},{"name":"optic atrophy 7 with or without auditory neuropathy","type":"related"}],"termid":"MONDO:0013069","xrefs":{"Monarch":{"xref_id":"0013069"}}}


id: PBO:0001578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set1C complex subunit Swd1","termid":"PBO:0001578"}


id: GO:1905869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of 3'-UTR-mediated mRNA stabilization.","definition_xrefs":["GO_REF:0000058","PMID:19737525","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"positive regulation of mRNA catabolic process","termid":"GO:0061014"},{"relation_name":"is_a","term_name":"regulation of 3'-UTR-mediated mRNA stabilization","termid":"GO:1905868"},{"relation_name":"negatively_regulates","term_name":"3'-UTR-mediated mRNA stabilization","termid":"GO:0070935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of 3'-UTR-mediated mRNA stabilization","synonyms":[{"name":"down regulation of 3'-UTR-mediated mRNA stabilization","type":"exact"},{"name":"down regulation of 3'-untranslated region-mediated mRNA stabilization","type":"exact"},{"name":"down-regulation of 3'-UTR-mediated mRNA stabilization","type":"exact"},{"name":"down-regulation of 3'-untranslated region-mediated mRNA stabilization","type":"exact"},{"name":"downregulation of 3'-UTR-mediated mRNA stabilization","type":"exact"},{"name":"downregulation of 3'-untranslated region-mediated mRNA stabilization","type":"exact"},{"name":"inhibition of 3'-UTR-mediated mRNA stabilization","type":"narrow"},{"name":"inhibition of 3'-untranslated region-mediated mRNA stabilization","type":"narrow"},{"name":"negative regulation of 3'-untranslated region-mediated mRNA stabilization","type":"exact"}],"termid":"GO:1905869"}


id: MONDO:0008763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A multisystemic disorder characterized by cone-rod dystrophy, hearing loss, obesity, insulin resistance and hyperinsulinemia, type 2 diabetes mellitus, dilated cardiomyopathy (DCM), and progressive hepatic and renal dysfunction.","definition_xrefs":["Orphanet:64"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"excluded_subClassOf","term_name":"kidney disorder","termid":"MONDO:0005240"},{"relation_name":"excluded_subClassOf","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome associated with dilated cardiomyopathy (obsolete MONDO:0016337)","termid":"MONDO:0016337"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic retinitis pigmentosa (obsolete MONDO:0020240)","termid":"MONDO:0020240"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"ciliopathy","termid":"MONDO:0005308"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Alstrom syndrome","secondary_identifiers":["MEDGEN:78675","NCIT:C84549","DOID:0050473","SCTID:63702009","ICD9:759.89","GARD:5787","NORD:757","MESH:D056769","MedDRA:10068783","OMIM:203800","UMLS:C0268425"],"synonyms":[{"name":"ALMS","type":"exact"},{"name":"ALSS","type":"exact"},{"name":"Alstrom syndrome","type":"exact"},{"name":"Alstrom's syndrome","type":"exact"},{"name":"Alström Syndrome","type":"exact"},{"name":"Alström syndrome","type":"exact"}],"termid":"MONDO:0008763","xrefs":{"Monarch":{"xref_id":"0008763"}}}


id: GO:0060888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pattern specification process that results in the subdivision of the epidermis of the limb in space to define a volume in which specific patterns of basal cell, spinous cell and granular cells will differentiate giving rise to the layers of the limb epidermis.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"is_a","term_name":"limb epidermis development","termid":"GO:0060887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"limb epidermis stratification","termid":"GO:0060888"}


id: FYPO:0003936
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the Golgi apparatus is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to Golgi apparatus","synonyms":[{"name":"abnormal protein localisation to Golgi apparatus","type":"exact"},{"name":"abnormal protein localization to Golgi apparatus during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to Golgi apparatus during vegetative growth","type":"exact"}],"termid":"FYPO:0003936"}


id: PBO:0058427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4797","termid":"PBO:0058427"}


id: GO:0086019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another and contributes to the heart process that regulates cardiac muscle contraction; beginning with the generation of an action potential in the sinoatrial node and ending with regulation of contraction of the myocardium.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"},{"relation_name":"is_a","term_name":"cell communication involved in cardiac conduction","termid":"GO:0086065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cell-cell signaling involved in cardiac conduction","synonyms":[{"name":"cell-cell signalling involved in cardiac conduction","type":"exact"}],"termid":"GO:0086019"}


id: MONDO:0019045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare form of sleep disorder.","gene_count":0,"genotype_count":0,"name":"obsolete rare sleep disorder (obsolete MONDO:0019045)","secondary_identifiers":["MedDRA:10040984","MESH:D012893","Orphanet:68354"],"synonyms":[{"name":"rare sleep disorder","type":"exact"},{"name":"rare sleep wake disorder","type":"exact"},{"name":"rare sleep-wake disorder","type":"exact"}],"termid":"MONDO:0019045","xrefs":{"Monarch":{"xref_id":"0019045"}}}


id: PBO:0067851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 153","termid":"PBO:0067851"}


id: PBO:0090698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT-type ubiquitin-protein ligase E3","termid":"PBO:0090698"}


id: GO:0035775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the pronephric glomerulus are generated and organized. The pronephric glomerulus is part of the pronephric nephron and is restricted to one body segment.","definition_xrefs":["GOC:mtg_kidney_jan10","PMID:18787069","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulus morphogenesis","termid":"GO:0072102"},{"relation_name":"part_of","term_name":"pronephric glomerulus development","termid":"GO:0039021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric glomerulus morphogenesis","termid":"GO:0035775"}


id: MONDO:0023203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fuchs atrophia gyrata chorioideae et retinae","secondary_identifiers":["MESH:C538071","MEDGEN:444126","UMLS:C2931721"],"termid":"MONDO:0023203","xrefs":{"Monarch":{"xref_id":"0023203"}}}


id: GO:0042984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of amyloid precursor protein (APP), the precursor of amyloid-beta.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glycoprotein biosynthetic process","termid":"GO:0010559"},{"relation_name":"regulates","term_name":"amyloid precursor protein biosynthetic process","termid":"GO:0042983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amyloid precursor protein biosynthetic process","synonyms":[{"name":"regulation of APP biosynthesis","type":"exact"},{"name":"regulation of APP biosynthetic process","type":"exact"},{"name":"regulation of amyloid precursor protein anabolism","type":"exact"},{"name":"regulation of amyloid precursor protein biosynthesis","type":"exact"},{"name":"regulation of amyloid precursor protein formation","type":"exact"},{"name":"regulation of amyloid precursor protein synthesis","type":"exact"}],"termid":"GO:0042984"}


id: GO:0030488
data:
  {"annotated_genes":["SJAG_04890","SJAG_02302","SJAG_04735","SJAG_00886","SJAG_04736","SJAG_01269","SJAG_02099","SJAG_02637","SJAG_01261","SJAG_04367","SJAG_04453","SJAG_05334","SJAG_04649","SJAG_05249","SJAG_03367","SJAG_04680","SJAG_04181","SJAG_01375","SJAG_02386","SJAG_04848","SJAG_00325","SJAG_02352","SJAG_00255","SJAG_01314","SJAG_02042","SJAG_04993","SJAG_00499"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63959,74141,74203,74534,75428,75890,77113,77653,77964,96514,98040,99886],"is_not":false,"summary":null,"term":"GO:0030488"},{"annotations":[79841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070901"},{"annotations":[59463,69054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106004"},{"annotations":[108602,112003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106217"},{"annotations":[107608,92268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002946"},{"annotations":[79837,72880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002939"},{"annotations":[105956,75013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002940"},{"annotations":[116680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002128"},{"annotations":[90077,95739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002127"},{"annotations":[99661,104712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002130"}]},"cv_name":"biological_process","definition":"The posttranscriptional addition of methyl groups to specific residues in a tRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA methylation","termid":"GO:0001510"},{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00255":null,"SJAG_00325":null,"SJAG_00499":null,"SJAG_00886":null,"SJAG_01261":null,"SJAG_01269":null,"SJAG_01314":null,"SJAG_01375":null,"SJAG_02042":null,"SJAG_02099":null,"SJAG_02302":null,"SJAG_02352":null,"SJAG_02386":null,"SJAG_02637":null,"SJAG_03367":null,"SJAG_04181":null,"SJAG_04367":null,"SJAG_04453":null,"SJAG_04649":null,"SJAG_04680":null,"SJAG_04735":null,"SJAG_04736":null,"SJAG_04848":null,"SJAG_04890":null,"SJAG_04993":null,"SJAG_05249":null,"SJAG_05334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0008150"],"is_obsolete":false,"name":"tRNA methylation","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0030488","terms_by_termid":{"GO:0002127":null,"GO:0002128":null,"GO:0002130":null,"GO:0002939":null,"GO:0002940":null,"GO:0002946":null,"GO:0030488":null,"GO:0070901":null,"GO:0106004":null,"GO:0106217":null}}


id: GO:0050242
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + phosphate + pyruvate = AMP + diphosphate + 2 H+ + phosphoenolpyruvate.","definition_xrefs":["RHEA:10756"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, paired acceptors","termid":"GO:0016781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"pyruvate, phosphate dikinase activity","secondary_identifiers":["EC:2.7.9.1","KEGG_REACTION:R00206","MetaCyc:PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN"],"synonyms":[{"name":"ATP:pyruvate, phosphate phosphotransferase activity","type":"related"},{"name":"PPDK","type":"related"},{"name":"orthophosphate dikinase pyruvate","type":"related"},{"name":"pyruvate, Pi dikinase activity","type":"related"},{"name":"pyruvate,orthophosphate dikinase activity","type":"related"},{"name":"pyruvate,phosphate dikinase activity","type":"related"},{"name":"pyruvate-inorganic phosphate dikinase activity","type":"related"},{"name":"pyruvate-phosphate dikinase (phosphorylating)","type":"related"},{"name":"pyruvate-phosphate dikinase activity","type":"related"},{"name":"pyruvate-phosphate ligase activity","type":"related"},{"name":"pyruvic-phosphate dikinase activity","type":"related"},{"name":"pyruvic-phosphate ligase activity","type":"related"}],"termid":"GO:0050242"}


id: PBO:0057825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3144","termid":"PBO:0057825"}


id: PATO:0002135
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A duration quality of a process inhering in a bearer by virtue of the bearer's delay to complete the closure of the opening of an anatomical entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed","termid":"PATO:0000502"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delayed closure","termid":"PATO:0002135"}


id: _global:acts_upstream_of,_positive_effect
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c 'acts upstream of, positive effect' p if c is enables f, and f is causally upstream of p, and the direction of f is positive","direct_ancestors":[{"relation_name":"is_a","term_name":"acts_upstream_of","termid":"_global:acts_upstream_of"},{"relation_name":"is_a","term_name":"acts_upstream_of_or_within,_positive_effect","termid":"_global:acts_upstream_of_or_within,_positive_effect"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acts_upstream_of,_positive_effect","secondary_identifiers":["RO:0004034"],"termid":"_global:acts_upstream_of,_positive_effect"}


id: MONDO:1011147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Achondroplasia that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"achondroplasia, non-human animal","termid":"MONDO:1010291"},{"relation_name":"is_a","term_name":"osteochondrodysplasia, dog","termid":"MONDO:1011194"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"achondroplasia, dog","secondary_identifiers":["OMIA:000004-9615"],"termid":"MONDO:1011147","xrefs":{"Monarch":{"xref_id":"1011147"}}}


id: MONDO:0016801
data:
  {"annotated_genes":["SJAG_00404","SJAG_00547","SJAG_01589","SJAG_01417","SJAG_01890"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012557"},{"annotations":[87720,87719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014775"},{"annotations":[87470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008922"},{"annotations":[87584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014804"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial membrane transport disorder","termid":"MONDO:0016800"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00404":null,"SJAG_00547":null,"SJAG_01417":null,"SJAG_01589":null,"SJAG_01890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial substrate carrier disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5680716","GARD:20762","icd11.foundation:1118834100","Orphanet:254830","MEDGEN:1842923"],"termid":"MONDO:0016801","terms_by_termid":{"MONDO:0008922":null,"MONDO:0012557":null,"MONDO:0014775":null,"MONDO:0014804":null},"xrefs":{"Monarch":{"xref_id":"0016801"}}}


id: PBO:0072833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP18 pseudogene 3","termid":"PBO:0072833"}


id: GO:0001969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the activation of the membrane attack complex components of the complement cascade.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of complement activation","termid":"GO:0030449"},{"relation_name":"regulates","term_name":"activation of membrane attack complex","termid":"GO:0001905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of activation of membrane attack complex","synonyms":[{"name":"regulation of MAC assembly","type":"exact"},{"name":"regulation of MAC formation","type":"exact"},{"name":"regulation of activation of MAC","type":"exact"},{"name":"regulation of activation of TCC","type":"narrow"},{"name":"regulation of activation of terminal complement complex","type":"narrow"},{"name":"regulation of activation of the terminal complement cascade","type":"narrow"},{"name":"regulation of membrane attack complex assembly","type":"exact"},{"name":"regulation of membrane attack complex formation","type":"exact"}],"termid":"GO:0001969"}


id: PBO:0040626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BANF1 pseudogene 5","termid":"PBO:0040626"}


id: PBO:0044108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis associated 62","termid":"PBO:0044108"}


id: GO:0044130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont stops, prevents or reduces its increase in size or mass within the cells or tissues of the host organism. The host is defined as the larger of the organisms involved in the symbiotic interaction.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of growth of symbiont in host (obsolete GO:0044130)","termid":"GO:0044130"}


id: MONDO:0015930
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete respiratory malformation (obsolete MONDO:0015930)","secondary_identifiers":["Orphanet:182111"],"termid":"MONDO:0015930","xrefs":{"Monarch":{"xref_id":"0015930"}}}


id: GO:0009589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which an ultraviolet radiation (UV light) stimulus is received and converted into a molecular signal. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers.","definition_xrefs":["GOC:go_curators","GOC:hb","ISBN:0198506732","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to UV","termid":"GO:0009411"},{"relation_name":"is_a","term_name":"detection of light stimulus","termid":"GO:0009583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of UV","synonyms":[{"name":"detection of UV light stimulus","type":"exact"},{"name":"detection of UV radiation stimulus","type":"exact"},{"name":"detection of ultraviolet light stimulus","type":"exact"},{"name":"detection of ultraviolet radiation stimulus","type":"exact"},{"name":"perception of UV","type":"related"}],"termid":"GO:0009589"}


id: MONDO:0008107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nystagmus","termid":"MONDO:0005712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"nystagmus, hereditary vertical","secondary_identifiers":["MESH:C537857","OMIM:164150","MEDGEN:322336","UMLS:C1834078"],"synonyms":[{"name":"congenital hereditary vertical nystagmus","type":"related"},{"name":"hereditary vertical nystagmus","type":"related"},{"name":"nystagmus, hereditary vertical","type":"exact"}],"termid":"MONDO:0008107","xrefs":{"Monarch":{"xref_id":"0008107"}}}


id: PBO:0072531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 61","termid":"PBO:0072531"}


id: MONDO:0009328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemangiomatosis, cutaneous, with associated features","secondary_identifiers":["MEDGEN:67397","OMIM:234800","MESH:C562438","UMLS:C0220738"],"synonyms":[{"name":"hemangiomatosis, cutaneous, with associated features","type":"exact"}],"termid":"MONDO:0009328","xrefs":{"Monarch":{"xref_id":"0009328"}}}


id: MONDO:0022986
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare condition characterized by generalized proliferation of pulmonary neuroendocrine cells. It manifests as progressive cough and dyspnea. It is considered a precursor for pulmonary carcinoid tumor.","definition_xrefs":["NCIT:C7437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diffuse idiopathic pulmonary neuroendocrine cell hyperplasia","secondary_identifiers":["MEDGEN:232427","Orphanet:617916","GARD:10780","UMLS:C1333291","icd11.foundation:1480946725"],"synonyms":[{"name":"DIP-NECH","type":"exact"},{"name":"DIPNECH","type":"exact"},{"name":"diffuse idiopathic pulmonary neuroendocrine cell hyperplasia","type":"exact"}],"termid":"MONDO:0022986","xrefs":{"Monarch":{"xref_id":"0022986"}}}


id: GO:0097685
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell surface furrow (or groove) found on a dinoflagellate apex. It typically loops around the apex.","definition_xrefs":["Wikipedia:Dinoflagellate#Morphology","GOC:at","PMID:20561119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface furrow","termid":"GO:0097610"},{"relation_name":"part_of","term_name":"dinoflagellate epicone","termid":"GO:0097613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0009986"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0009986","GO:0005575"],"is_obsolete":false,"name":"dinoflagellate apical groove","synonyms":[{"name":"apical groove","type":"broad"}],"termid":"GO:0097685"}


id: MONDO:1012413
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neonatal pancytopenia, non-human animal","termid":"MONDO:1011702"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal pancytopenia, cattle","secondary_identifiers":["OMIA:001539-9913"],"termid":"MONDO:1012413","xrefs":{"Monarch":{"xref_id":"1012413"}}}


id: PBO:0068271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease A family member 8","termid":"PBO:0068271"}


id: PBO:0029578
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_reactive_oxygen_species_level_in_stationary_phase","termid":"PBO:0029578"}


id: PBO:0001335
data:
  {"annotation_feature_type":"gene","cv_name":"m_f_g","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plus end tracking protein","termid":"PBO:0001335"}


id: PBO:0036320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAN complex protein phosphotransferase subunit Pan3 (predicted)","termid":"PBO:0036320"}


id: PBO:0074987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-29","termid":"PBO:0074987"}


id: PBO:0088055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-like protein with similarity to mammalian NEDD8; conjugation (neddylation) substrates include the cullins Cdc53p, Rtt101p, and Cul3p; activated by Ula1p and Uba3p (E1 enzyme pair); conjugation mediated by Ubc12p (E2 enzyme)","termid":"PBO:0088055"}


id: PBO:0113273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIK-related protein kinase and rapamycin target; subunit of TORC1, a complex that regulates growth in response to nutrients and TORC2, a complex that regulates plasma membrane (PM) homeostasis and cell-cycle dependent polarization of the actin cytoskeleton; involved in meiosis; PM retention is dependent on Avo3p; malonyl-CoA is a direct ATP-competitive inhibitor of TORC1; TOR2 has a paralog, TOR1, that arose from the whole genome duplication","termid":"PBO:0113273"}


id: MONDO:1012921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any osteogenesis imperfecta that occurs in domestic cats due to a mutation in the CREB3L1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta, domestic cat","termid":"MONDO:1011582"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteogenesis imperfecta, CREB3L1-related, domestic cat","secondary_identifiers":["OMIA:002533-9685"],"termid":"MONDO:1012921","xrefs":{"Monarch":{"xref_id":"1012921"}}}


id: MONDO:0016017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Methimazole embryopathy is a teratogenic embryofetopathy that results from maternal exposition to methimazole (MMI; or the parent compound carbimazole) in the first trimester of pregnancy. MMI is an antithyroid thionamide drug used for the treatment of Graves' disease. In the infant, MMI may result in choanal atresia, esophageal atresia, omphalocele, omphalomesenteric duct anomalies, congenital heart disease (such as ventricular septal defect), renal system malformations and aplasia cutis. Additional features that may be observed include facial dysmorphism (short upslanting palpebral fissures, a broad nasal bridge with a small nose and a broad forehead) and athelia/hypothelia.","definition_xrefs":["Orphanet:1923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"toxic or drug-related embryofetopathy","termid":"MONDO:0016677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methimazole embryofetopathy","secondary_identifiers":["UMLS:C4510379","MEDGEN:1388574","SCTID:724144006","icd11.foundation:1204409156"],"synonyms":[{"name":"MMI/CMZ embryofetopathy","type":"exact"},{"name":"MMI/CMZ embryopathy","type":"exact"},{"name":"Methimazole antenatal exposure","type":"related"},{"name":"Methimazole/carbimazole embryofetopathy","type":"exact"},{"name":"Methimazole/carbimazole embryopathy","type":"exact"},{"name":"fetal methimazole syndrome","type":"related"},{"name":"foetal methimazole syndrome","type":"related"},{"name":"methimazole embryofetopathy","type":"exact"}],"termid":"MONDO:0016017","xrefs":{"Monarch":{"xref_id":"0016017"}}}


id: PBO:0043494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin 3","termid":"PBO:0043494"}


id: MONDO:0850103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"non-specific autoimmune supratentorial encephalitis without characteristic antibodies","secondary_identifiers":["GARD:22498","UMLS:C5680409","MEDGEN:1843156","Orphanet:624178"],"termid":"MONDO:0850103","xrefs":{"Monarch":{"xref_id":"0850103"}}}


id: GO:0102152
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + 1-palmitoyl-2-linoleoyl-phosphatidylcholine + NADPH + O2 = 1-palmitoyl-2-vernoloyl-phosphatidylcholine + NADP + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete Delta12-linoleate epoxygenase activity (obsolete GO:0102152)","termid":"GO:0102152"}


id: PBO:0003280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Rrp46 (predicted)","termid":"PBO:0003280"}


id: PATO:0002233
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located far (not close to) in space in relation to another entity.","definition_xrefs":["PATOC:PM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"far from","synonyms":[{"name":"distant from","type":"exact"},{"name":"remote from","type":"exact"}],"termid":"PATO:0002233"}


id: GO:0061252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a mesonephric glomerular epithelial cell. Mesonephric glomerular epithelial cells are specialized epithelial cells that form part of the mesonephric glomerulus; there are two types, mesonephric glomerular parietal epithelial cells and mesonephric glomerular visceral epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular epithelial cell fate commitment","termid":"GO:0072314"},{"relation_name":"part_of","term_name":"mesonephric glomerular epithelial cell differentiation","termid":"GO:0061250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerular epithelial cell fate commitment","termid":"GO:0061252"}


id: MONDO:0012384
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial panic disorder","termid":"MONDO:0031240"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"panic disorder 3","secondary_identifiers":["MEDGEN:400645","OMIM:609985","UMLS:C1864946"],"synonyms":[{"name":"Pand3","type":"related"},{"name":"panic disorder 3","type":"exact"},{"name":"panic disorder susceptibility locus, chromosome 4Q-related","type":"related"},{"name":"panic disorder type 3","type":"exact"}],"termid":"MONDO:0012384","xrefs":{"Monarch":{"xref_id":"0012384"}}}


id: GO:0070549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An siRNA-mediated post-transcriptional gene silencing pathway that blocks the translation of target mRNAs into proteins. Once incorporated into a RNA-induced silencing complex (RISC), an siRNA will typically mediate repression of translation if the siRNA perfectly complements elements located in the 3' untranslated region of target mRNAs.","definition_xrefs":["GOC:mah","PMID:18771919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation","termid":"GO:0017148"},{"relation_name":"is_a","term_name":"siRNA-mediated post-transcriptional gene silencing","termid":"GO:0140766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"siRNA-mediated gene silencing by inhibition of translation","synonyms":[{"name":"RNA interference, negative regulation of translation","type":"exact"},{"name":"down regulation of translation involved in RNA interference","type":"broad"},{"name":"down-regulation of translation involved in RNA interference","type":"broad"},{"name":"downregulation of translation involved in RNA interference","type":"broad"},{"name":"inhibition of translation involved in RNA interference","type":"broad"},{"name":"negative regulation of translation involved in RNA interference","type":"broad"}],"termid":"GO:0070549"}


id: GO:0075190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of symbiont hyphopodium formation on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of hyphopodium formation","termid":"GO:0075188"},{"relation_name":"negatively_regulates","term_name":"hyphopodium formation","termid":"GO:0075187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hyphopodium formation","synonyms":[{"name":"negative regulation of hyphopodium formation on or near host","type":"exact"}],"termid":"GO:0075190"}


id: MONDO:0017423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic terminal limb defects (obsolete MONDO:0017421)","termid":"MONDO:0017421"}],"gene_count":0,"genotype_count":0,"name":"obsolete split hand or/and split foot malformation (obsolete MONDO:0017423)","secondary_identifiers":["Orphanet:294935"],"termid":"MONDO:0017423","xrefs":{"Monarch":{"xref_id":"0017423"}}}


id: PBO:0027374
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glutathione_transferase_activity","termid":"PBO:0027374"}


id: GO:0044856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which plasma membrane rafts are transported to, or maintained in, a specific location.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane organization","termid":"GO:0007009"},{"relation_name":"is_a","term_name":"membrane raft localization","termid":"GO:0051665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"plasma membrane raft localization","termid":"GO:0044856"}


id: GO:0045300
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H+ + O2 + octadecanoyl-[ACP] + 2 reduced [2Fe-2S]-[ferredoxin] = (9Z)-octadecenoyl-[ACP] + 2 H2O + 2 oxidized [2Fe-2S]-[ferredoxin].","definition_xrefs":["RHEA:11776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"stearoyl-[ACP] desaturase activity","secondary_identifiers":["MetaCyc:RXN-7903","KEGG_REACTION:R03370","EC:1.14.19.2"],"synonyms":[{"name":"acyl-[acyl-carrier-protein] desaturase activity","type":"related"},{"name":"acyl-acyl-carrier-protein desaturase activity","type":"related"},{"name":"acyl-acyl-carrier-protein, hydrogen-donor:oxygen oxidoreductase activity","type":"related"},{"name":"stearyl acyl carrier protein desaturase activity","type":"related"},{"name":"stearyl-ACP desaturase activity","type":"related"}],"termid":"GO:0045300"}


id: GO:0047362
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dithioerythritol + thiosulfate = hydrogen sulfide + dithioerythritol disulfide + sulfite.","definition_xrefs":["EC:2.8.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase activity","termid":"GO:0016783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016782","GO:0016740"],"is_obsolete":false,"name":"thiosulfate-dithiol sulfurtransferase activity","secondary_identifiers":["MetaCyc:2.8.1.5-RXN","RHEA:15121"],"synonyms":[{"name":"TSR","type":"related"},{"name":"thiosulfate reductase activity","type":"related"},{"name":"thiosulfate:dithioerythritol sulfurtransferase activity","type":"related"},{"name":"thiosulphate-dithiol sulphurtransferase activity","type":"exact"}],"termid":"GO:0047362"}


id: PBO:0041324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2orf74 divergent transcript","termid":"PBO:0041324"}


id: PBO:0004755
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"equivalent function in S. cerevisiae is performed by STE12, but this is STE-like not HMG","termid":"PBO:0004755"}


id: PBO:0044975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAH-box helicase 15","termid":"PBO:0044975"}


id: GO:1905654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of artery smooth muscle contraction.","definition_xrefs":["PMID:27389411","GOC:BHF","GOC:BHF_miRNA","GOC:TermGenie","GOC:rph","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle contraction","termid":"GO:0003056"},{"relation_name":"regulates","term_name":"artery smooth muscle contraction","termid":"GO:0014824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of artery smooth muscle contraction","termid":"GO:1905654"}


id: PBO:0075683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroid receptor RNA activator 1","termid":"PBO:0075683"}


id: PR:Q9UUK1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A beta-catenin-like protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02071","PANTHER:PTHR14978:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-catenin-like protein 1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.06c","secondary_identifiers":["UniProtKB:Q9UUK1"],"synonyms":[{"name":"Spom972h-CTNNBL1","type":"exact"}],"termid":"PR:Q9UUK1"}


id: GO:0005908
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete HA2 clathrin adaptor (obsolete GO:0005908)","synonyms":[{"name":"AP2","type":"related"},{"name":"HA2 clathrin adaptor","type":"exact"}],"termid":"GO:0005908"}


id: GO:1905542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of L-arginine import across plasma membrane.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:14718525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"is_a","term_name":"regulation of L-arginine import across plasma membrane","termid":"GO:1905541"},{"relation_name":"negatively_regulates","term_name":"L-arginine import across plasma membrane","termid":"GO:0097638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"negative regulation of L-arginine import across plasma membrane","secondary_identifiers":["GO:1902827"],"synonyms":[{"name":"down regulation of L-arginine import into cell","type":"exact"},{"name":"downregulation of L-arginine import into cell","type":"exact"},{"name":"inhibition of L-arginine import into cell","type":"narrow"},{"name":"negative regulation of L-arginine import into cell","type":"exact"}],"termid":"GO:1905542"}


id: MONDO:0013246
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"metabolic dysfunction-associated steatotic liver disease","termid":"MONDO:0013209"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty liver disease, nonalcoholic, susceptibility to, 2","secondary_identifiers":["MEDGEN:462001","OMIM:613387","UMLS:C3150651"],"synonyms":[{"name":"NAFLD2","type":"exact"},{"name":"fatty liver disease, nonalcoholic, susceptibility to, 2","type":"exact"}],"termid":"MONDO:0013246","xrefs":{"Monarch":{"xref_id":"0013246"}}}


id: PBO:0077598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 11A","termid":"PBO:0077598"}


id: MONDO:0021164
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory disease involving a pathogenic inflammatory response in the prepuce of penis.","definition_xrefs":["MONDO:patterns/inflammatory_disease_by_site"],"direct_ancestors":[{"relation_name":"is_a","term_name":"penile disorder","termid":"MONDO:0002036"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posthitis","secondary_identifiers":["UMLS:C0235640","MEDGEN:536423","SCTID:44318002","icd11.foundation:1119547622"],"synonyms":[{"name":"inflammation of prepuce of penis","type":"exact"},{"name":"prepuce of penis inflammation","type":"exact"}],"termid":"MONDO:0021164","xrefs":{"Monarch":{"xref_id":"0021164"}}}


id: GO:0047384
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + [hydroxymethylglutaryl-CoA reductase (NADPH)] phosphate = phosphate + [hydroxymethylglutaryl-CoA reductase (NADPH)].","definition_xrefs":["MetaCyc:3.1.3.47-RXN","EC:3.1.3.47"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein phosphatase activity","termid":"GO:0004721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0004721","GO:0140096","GO:0016787"],"is_obsolete":false,"name":"[hydroxymethylglutaryl-CoA reductase (NADPH)]-phosphatase activity","synonyms":[{"name":"hydroxymethylglutaryl-CoA reductase (NADPH)-phosphatase activity","type":"related"},{"name":"hydroxymethylglutaryl-CoA reductase (NADPH)-phosphate phosphohydrolase activity","type":"related"},{"name":"reductase phosphatase activity","type":"broad"}],"termid":"GO:0047384"}


id: FYPO:0002662
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of trehalose measured in a cell is lower than normal when the cell is subject to heat shock.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular trehalose level","termid":"FYPO:0001447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular trehalose level during heat shock","synonyms":[{"name":"decreased cellular trehalose level during heat shock during mitotic cell cycle","type":"related"},{"name":"decreased cellular trehalose level during vegetative growth and during heat shock","type":"exact"},{"name":"decreased trehalose accumulation during heat shock","type":"related"},{"name":"reduced cellular trehalose level during heat shock","type":"exact"}],"termid":"FYPO:0002662"}


id: PBO:0059940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 26","termid":"PBO:0059940"}


id: PBO:0027966
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_dimethylation_at_subtelomeric_heterochromatin","termid":"PBO:0027966"}


id: GO:0071190
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the cell adhesion molecules protocadherin-alpha-v7 and protocadherin-gamma-b2, and is involved in the regulation of protein localization to the plasma membrane.","definition_xrefs":["PMID:15347688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protocadherin-alpha-protocadherin-gamma complex","termid":"GO:0071183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"protocadherin-alpha-v7-protocadherin-gamma-b2 complex","synonyms":[{"name":"Pcdha7-Pcdhgb4 complex","type":"narrow"}],"termid":"GO:0071190"}


id: FYPO:0000035
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize arginine, and therefore requires arginine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for arginine","synonyms":[{"name":"arginine auxotrophy","type":"exact"},{"name":"growth auxotrophic for arginine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for arginine during vegetative growth","type":"exact"}],"termid":"FYPO:0000035"}


id: PR:P32372
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rad4 gene.","definition_xrefs":["UniProtKB:P32372","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-M checkpoint control protein rad4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.18c","synonyms":[{"name":"P74 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rad4","type":"exact"},{"name":"protein cut5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P32372"}


id: PBO:0050888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-L-iduronidase","termid":"PBO:0050888"}


id: SO:0001682
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory region that is involved in the control of the process of nucleotide replication.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_region","termid":"SO:0005836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication_regulatory_region","synonyms":[{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:replication_regulatory_region","type":"exact"},{"name":"replication regulatory region","type":"exact"}],"termid":"SO:0001682"}


id: FYPO:0003945
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of an RNA catabolic process is increased during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA catabolic process during vegetative growth","termid":"FYPO:0002138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000294","FYPO:0001320"],"is_obsolete":false,"name":"increased RNA catabolic process during cellular response to hydrogen peroxide","synonyms":[{"name":"increased RNA breakdown during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"increased RNA catabolic process during cellular response to H2O2","type":"related"},{"name":"increased RNA catabolic process during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"increased RNA catabolism during cellular response to hydrogen peroxide","type":"exact"},{"name":"increased RNA degradation during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0003945"}


id: FYPO:0000935
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cortical microtubule cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex during vegetative growth","termid":"FYPO:0000928"},{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000931"},{"relation_name":"is_a","term_name":"abnormal protein localization to cortical microtubule cytoskeleton","termid":"FYPO:0004265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to cortical microtubule cytoskeleton during vegetative growth","synonyms":[{"name":"abnormal protein localisation to cortical microtubule cytoskeleton during vegetative growth","type":"exact"},{"name":"abnormal protein localization to cortical microtubule cytoskeleton during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000935"}


id: GO:0052016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of glucan molecules within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by symbiont of host glucan (obsolete GO:0052016)","synonyms":[{"name":"catabolism by organism of host glucan","type":"exact"}],"termid":"GO:0052016"}


id: PBO:0089631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthine synthase Dph5","termid":"PBO:0089631"}


id: PBO:0054325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1718","termid":"PBO:0054325"}


id: FYPO:0007914
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid separation occurs during mitotic metaphase.","definition_xrefs":["PMID:10398680","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"premature mitotic sister chromatid separation","termid":"FYPO:0000416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0000641","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"mitotic sister chromatid separation during metaphase","termid":"FYPO:0007914"}


id: MONDO:0015612
data:
  {"annotated_genes":["SJAG_03375"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010359"}]},"cv_name":"mondo","definition":"Dent disease is a rare genetic renal tubular disease characterized by manifestations of proximal tubule dysfunction.","definition_xrefs":["Orphanet:1652"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"rickets","termid":"MONDO:0005520"},{"relation_name":"is_a","term_name":"renal tubular transport disease","termid":"MONDO:0006510"},{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03375":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Dent disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0050699","GARD:13105","icd11.foundation:1762998355","NORD:1040","MedDRA:10069199","MESH:D057973","SCTID:444645005","UMLS:C0878681","NCIT:C123260","MEDGEN:168056","OMIMPS:300009"],"synonyms":[{"name":"Dent disease 1","type":"narrow"},{"name":"Dent disease 2","type":"narrow"},{"name":"Dent syndrome","type":"exact"},{"name":"Dent's disease","type":"exact"},{"name":"Dents disease","type":"related"},{"name":"X-linked recessive hypercalciuric hypophosphatemic rickets","type":"exact"},{"name":"X-linked recessive hypophosphatemic rickets","type":"exact"},{"name":"X-linked recessive nephrolithiasis","type":"exact"},{"name":"low-molecular-weight proteinuria with hypercalciuria and nephrocalcinosis","type":"exact"},{"name":"renal Fanconi syndrome with nephrocalcinosis and renal stones","type":"exact"}],"termid":"MONDO:0015612","terms_by_termid":{"MONDO:0010359":null},"xrefs":{"Monarch":{"xref_id":"0015612"}}}


id: PR:O13717
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC14C4.10c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C14C4.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.10c","synonyms":[{"name":"Spom972h-SPAC14C4.10c","type":"exact"}],"termid":"PR:O13717"}


id: PBO:0041847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CASK interacting protein 1","termid":"PBO:0041847"}


id: FYPO:0001145
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of Man9GlcNAc2 measured in a cell is higher than normal. Man9GlcNAc2 is any N-glycan that consists of a branched undecasaccharide consisting of nine D-mannosyl residues and two N-acetylglucosamine residues.","definition_xrefs":["CHEBI:59579","PMID:12686557","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased polysaccharide level during vegetative growth","termid":"FYPO:0001083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased Man9GlcNAc level","synonyms":[{"name":"increased Man9GlcNAc accumulation","type":"related"},{"name":"increased Man9GlcNAc level during mitotic cell cycle","type":"related"},{"name":"increased Man9GlcNAc level during vegetative growth","type":"exact"},{"name":"increased Man9GlcNAc2 level","type":"exact"},{"name":"increased cellular Man9GlcNAc level","type":"exact"}],"termid":"FYPO:0001145"}


id: PBO:0044732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 18","termid":"PBO:0044732"}


id: PBO:0052984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L antigen family member 3","termid":"PBO:0052984"}


id: PBO:0048667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastrokine 2","termid":"PBO:0048667"}


id: GO:1902987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lysine biosynthetic process via aminoadipic acid.","definition_xrefs":["PMID:8590464","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of lysine biosynthetic process via aminoadipic acid","termid":"GO:1902986"},{"relation_name":"is_a","term_name":"negative regulation of amino acid biosynthetic process","termid":"GO:2000283"},{"relation_name":"negatively_regulates","term_name":"lysine biosynthetic process via aminoadipic acid","termid":"GO:0019878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"negative regulation of lysine biosynthetic process via aminoadipic acid","synonyms":[{"name":"down regulation of lysine anabolism via aminoadipic acid","type":"exact"},{"name":"down regulation of lysine biosynthesis, aminoadipic acid pathway","type":"exact"},{"name":"down regulation of lysine biosynthesis, aminoadipic pathway","type":"exact"},{"name":"down regulation of lysine biosynthetic process via aminoadipic acid","type":"exact"},{"name":"down regulation of lysine biosynthetic process, aminoadipic acid pathway","type":"exact"},{"name":"down regulation of lysine biosynthetic process, aminoadipic pathway","type":"exact"},{"name":"down regulation of lysine formation via aminoadipic acid","type":"exact"},{"name":"down regulation of lysine synthesis via aminoadipic acid","type":"exact"},{"name":"down-regulation of lysine anabolism via aminoadipic acid","type":"exact"},{"name":"down-regulation of lysine biosynthesis, aminoadipic acid pathway","type":"exact"},{"name":"down-regulation of lysine biosynthesis, aminoadipic pathway","type":"exact"},{"name":"down-regulation of lysine biosynthetic process via aminoadipic acid","type":"exact"},{"name":"down-regulation of lysine biosynthetic process, aminoadipic acid pathway","type":"exact"},{"name":"down-regulation of lysine biosynthetic process, aminoadipic pathway","type":"exact"},{"name":"down-regulation of lysine formation via aminoadipic acid","type":"exact"},{"name":"down-regulation of lysine synthesis via aminoadipic acid","type":"exact"},{"name":"downregulation of lysine anabolism via aminoadipic acid","type":"exact"},{"name":"downregulation of lysine biosynthesis, aminoadipic acid pathway","type":"exact"},{"name":"downregulation of lysine biosynthesis, aminoadipic pathway","type":"exact"},{"name":"downregulation of lysine biosynthetic process via aminoadipic acid","type":"exact"},{"name":"downregulation of lysine biosynthetic process, aminoadipic acid pathway","type":"exact"},{"name":"downregulation of lysine biosynthetic process, aminoadipic pathway","type":"exact"},{"name":"downregulation of lysine formation via aminoadipic acid","type":"exact"},{"name":"downregulation of lysine synthesis via aminoadipic acid","type":"exact"},{"name":"inhibition of lysine anabolism via aminoadipic acid","type":"narrow"},{"name":"inhibition of lysine biosynthesis, aminoadipic acid pathway","type":"narrow"},{"name":"inhibition of lysine biosynthesis, aminoadipic pathway","type":"narrow"},{"name":"inhibition of lysine biosynthetic process via aminoadipic acid","type":"narrow"},{"name":"inhibition of lysine biosynthetic process, aminoadipic acid pathway","type":"narrow"},{"name":"inhibition of lysine biosynthetic process, aminoadipic pathway","type":"narrow"},{"name":"inhibition of lysine formation via aminoadipic acid","type":"narrow"},{"name":"inhibition of lysine synthesis via aminoadipic acid","type":"narrow"},{"name":"negative regulation of lysine anabolism via aminoadipic acid","type":"exact"},{"name":"negative regulation of lysine biosynthesis, aminoadipic acid pathway","type":"exact"},{"name":"negative regulation of lysine biosynthesis, aminoadipic pathway","type":"exact"},{"name":"negative regulation of lysine biosynthetic process, aminoadipic acid pathway","type":"exact"},{"name":"negative regulation of lysine biosynthetic process, aminoadipic pathway","type":"exact"},{"name":"negative regulation of lysine formation via aminoadipic acid","type":"exact"},{"name":"negative regulation of lysine synthesis via aminoadipic acid","type":"exact"}],"termid":"GO:1902987"}


id: PBO:0087120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RING finger ubiquitin ligase (E3); involved in ubiquitination and degradation of excess histones; interacts with Ubc4p and Rad53p; null mutant sensitive to hydroxyurea (HU)","termid":"PBO:0087120"}


id: MONDO:0008733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial glucocorticoid deficiency (FGD) is a group of primary adrenal insufficiencies characterized clinically by neonatal hyperpigmentation, hypoglycemia, failure to thrive, and recurrent infections, and biochemically by glucocorticoid deficiency without mineralocorticoid deficiency.","definition_xrefs":["Orphanet:361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"chronic primary adrenal insufficiency","termid":"MONDO:0015129"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial glucocorticoid deficiency","secondary_identifiers":["DOID:0080620","MESH:C565974","UMLS:C4054695","icd11.foundation:861297039","NCIT:C120446","SCTID:765326001","GARD:2498","MEDGEN:885955","OMIMPS:202200"],"synonyms":[{"name":"GCCD","type":"related"},{"name":"glucocorticoid deficiency","type":"broad"}],"termid":"MONDO:0008733","xrefs":{"Monarch":{"xref_id":"0008733"}}}


id: PBO:0055012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2427","termid":"PBO:0055012"}


id: GO:0043104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the activity of the enzyme GTP cyclohydrolase I.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of GTP cyclohydrolase I activity (obsolete GO:0043104)","synonyms":[{"name":"activation of GTP cyclohydrolase I activity","type":"narrow"},{"name":"stimulation of GTP cyclohydrolase I activity","type":"narrow"},{"name":"up regulation of GTP cyclohydrolase I activity","type":"exact"},{"name":"up-regulation of GTP cyclohydrolase I activity","type":"exact"},{"name":"upregulation of GTP cyclohydrolase I activity","type":"exact"}],"termid":"GO:0043104"}


id: GO:0071420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a histamine stimulus. Histamine, the biogenic amine 2-(1H-imidazol-4-yl)ethanamine, is involved in local immune responses as well as regulating physiological function in the gut and acting as a neurotransmitter.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to histamine","termid":"GO:0034776"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to histamine","synonyms":[{"name":"cellular response to histamine stimulus","type":"exact"}],"termid":"GO:0071420"}


id: PBO:0087362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sporulation-specific activator of Chs3p (chitin synthase III); required for the synthesis of the chitosan layer of ascospores; transcriptionally induced at alkaline pH; SHC1 has a paralog, SKT5, that arose from the whole genome duplication","termid":"PBO:0087362"}


id: PR:Q9P6N3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC823.13c gene.","definition_xrefs":["UniProtKB:Q9P6N3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensitive to high expression protein 9 homolog, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.13c","synonyms":[{"name":"Spom972h-SPAC823.13c","type":"exact"}],"termid":"PR:Q9P6N3"}


id: PBO:0044708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 6 pseudogene 2","termid":"PBO:0044708"}


id: PBO:0088548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA snoRNP complex protein","termid":"PBO:0088548"}


id: PBO:0070825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 3","termid":"PBO:0070825"}


id: FYPO:0001081
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of alpha-D-glucan measured in the cell wall is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell wall polysaccharide level","termid":"FYPO:0002266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased cell wall alpha-glucan level","synonyms":[{"name":"decreased cell wall alpha-D-glucan level","type":"exact"},{"name":"decreased cell wall alpha-glucan accumulation","type":"related"},{"name":"decreased cell wall alpha-glucan level during mitotic cell cycle","type":"related"},{"name":"decreased cell wall alpha-glucan level during vegetative growth","type":"exact"},{"name":"reduced cell wall alpha-glucan level","type":"exact"}],"termid":"FYPO:0001081"}


id: PBO:0087954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation termination factor eRF3; has a role in mRNA deadenylation and decay; altered protein conformation creates the [PSI(+)] prion that modifies cellular fitness, alters translational fidelity by affecting reading frame selection, and results in a nonsense suppressor phenotype; many stress-response genes are repressed in the presence of [PSI(+)]","termid":"PBO:0087954"}


id: PBO:0110189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prospore membrane formation Mug56","termid":"PBO:0110189"}


id: PBO:0044050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSRP2 pseudogene 1","termid":"PBO:0044050"}


id: GO:0062169
data:
  {"annotated_genes":["SJAG_03073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062168"}]},"cv_name":"biological_process","definition":"Any process that mediates the frequency, rate, or extent of plus-end directed microtubule sliding.","definition_xrefs":["PMID:21892183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule-based movement","termid":"GO:0060632"},{"relation_name":"regulates","term_name":"plus-end directed microtubule sliding","termid":"GO:0031535"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of plus-end directed microtubule sliding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0062169","terms_by_termid":{"GO:0062168":null}}


id: PBO:0078332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon CTC) 1-4","termid":"PBO:0078332"}


id: PBO:0089026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase epsilon subunit Ost2","termid":"PBO:0089026"}


id: MONDO:0002841
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete eosinophilic gastroenteritis (obsolete MONDO:0002841)","termid":"MONDO:0002841","xrefs":{"Monarch":{"xref_id":"0002841"}}}


id: GO:0045842
data:
  {"annotated_genes":["SJAG_02498","SJAG_00883","SJAG_01679","SJAG_03681","SJAG_02336","SJAG_02380","SJAG_00666","SJAG_01805","SJAG_04968","SJAG_04573","SJAG_03048","SJAG_03353","SJAG_04259","SJAG_03126","SJAG_02169","SJAG_01297","SJAG_02451"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95617,99510,101960,103925,104201,113228,116626],"is_not":false,"summary":null,"term":"GO:0045842"},{"annotations":[101403,109064,115641,117760,105711,116129,110092,113813,92534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[96009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the cell cycle process in which a cell progresses from metaphase to anaphase during mitosis, triggered by the activation of the anaphase promoting complex by Cdc20/Sleepy homolog which results in the degradation of Securin.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic metaphase/anaphase transition","termid":"GO:0030071"},{"relation_name":"is_a","term_name":"positive regulation of mitotic nuclear division","termid":"GO:0045840"},{"relation_name":"is_a","term_name":"positive regulation of mitotic sister chromatid separation","termid":"GO:1901970"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cell cycle phase transition","termid":"GO:1901992"},{"relation_name":"is_a","term_name":"positive regulation of metaphase/anaphase transition of cell cycle","termid":"GO:1902101"},{"relation_name":"positively_regulates","term_name":"metaphase/anaphase transition of mitotic cell cycle","termid":"GO:0007091"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00666":null,"SJAG_00883":null,"SJAG_01297":null,"SJAG_01679":null,"SJAG_01805":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02380":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04259":null,"SJAG_04573":null,"SJAG_04968":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0044772"],"is_obsolete":false,"name":"positive regulation of mitotic metaphase/anaphase transition","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of mitotic metaphase/anaphase transition","type":"narrow"},{"name":"stimulation of mitotic metaphase/anaphase transition","type":"narrow"},{"name":"up regulation of mitotic metaphase/anaphase transition","type":"exact"},{"name":"up-regulation of mitotic metaphase/anaphase transition","type":"exact"},{"name":"upregulation of mitotic metaphase/anaphase transition","type":"exact"}],"termid":"GO:0045842","terms_by_termid":{"GO:0045842":null,"GO:0140499":null,"GO:1902426":null}}


id: MONDO:0030522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 64","secondary_identifiers":["MEDGEN:1794272","DOID:0112353","OMIM:619696","UMLS:C5562062"],"synonyms":[{"name":"SPGF64","type":"exact"}],"termid":"MONDO:0030522","xrefs":{"Monarch":{"xref_id":"0030522"}}}


id: GO:0006296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The endonucleolytic cleavage of the damaged strand of DNA 5' to the site of damage. The incision occurs at the junction of single-stranded DNA and double-stranded DNA that is formed when the DNA duplex is unwound. The incision follows the incision formed 3' to the site of damage.","definition_xrefs":["GOC:elh","PMID:10197977"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleotide-excision repair, DNA incision, 5'-to lesion (obsolete GO:0006296)","synonyms":[{"name":"nucleotide-excision repair, DNA incision, 5' to lesion","type":"exact"}],"termid":"GO:0006296"}


id: PBO:0075952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal transducing adaptor molecule","termid":"PBO:0075952"}


id: GO:0048304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of isotype switching to IgG isotypes.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of isotype switching","termid":"GO:0045830"},{"relation_name":"is_a","term_name":"regulation of isotype switching to IgG isotypes","termid":"GO:0048302"},{"relation_name":"positively_regulates","term_name":"isotype switching to IgG isotypes","termid":"GO:0048291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of isotype switching to IgG isotypes","synonyms":[{"name":"activation of isotype switching to IgG isotypes","type":"narrow"},{"name":"positive regulation of class switch recombination to IgG isotypes","type":"exact"},{"name":"positive regulation of class switching to IgG isotypes","type":"exact"},{"name":"positive regulation of isotype switch recombination to IgG isotypes","type":"exact"},{"name":"stimulation of isotype switching to IgG isotypes","type":"narrow"},{"name":"up regulation of isotype switching to IgG isotypes","type":"exact"},{"name":"up-regulation of isotype switching to IgG isotypes","type":"exact"},{"name":"upregulation of isotype switching to IgG isotypes","type":"exact"}],"termid":"GO:0048304"}


id: PBO:0039084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agouti related neuropeptide","termid":"PBO:0039084"}


id: GO:0031115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of microtubule polymerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of microtubule polymerization or depolymerization","termid":"GO:0031111"},{"relation_name":"is_a","term_name":"regulation of microtubule polymerization","termid":"GO:0031113"},{"relation_name":"is_a","term_name":"negative regulation of protein polymerization","termid":"GO:0032272"},{"relation_name":"is_a","term_name":"negative regulation of supramolecular fiber organization","termid":"GO:1902904"},{"relation_name":"negatively_regulates","term_name":"microtubule polymerization","termid":"GO:0046785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0000226","GO:0044085","GO:0007010"],"is_obsolete":false,"name":"negative regulation of microtubule polymerization","synonyms":[{"name":"down regulation of microtubule polymerization","type":"exact"},{"name":"down-regulation of microtubule polymerization","type":"exact"},{"name":"downregulation of microtubule polymerization","type":"exact"},{"name":"inhibition of microtubule polymerization","type":"narrow"}],"termid":"GO:0031115"}


id: PBO:0054249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1632","termid":"PBO:0054249"}


id: PBO:0042034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 88C","termid":"PBO:0042034"}


id: MOD:00483
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction with N-ethylmaleimide.","definition_xrefs":["OMSSA:83","PubMed:12777388","Unimod:108#C","PubMed:11813307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"N-ethylmaleimide derivatized cysteine","synonyms":[{"name":"N-ethylmaleimide on cysteines","type":"related"},{"name":"Nethylmaleimide","type":"related"},{"name":"nemc","type":"exact"}],"termid":"MOD:00483"}


id: GO:0030803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cyclic nucleotides.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cyclic nucleotide biosynthetic process (obsolete GO:0030803)","synonyms":[{"name":"down regulation of cyclic nucleotide biosynthetic process","type":"exact"},{"name":"down-regulation of cyclic nucleotide biosynthetic process","type":"exact"},{"name":"downregulation of cyclic nucleotide biosynthetic process","type":"exact"},{"name":"inhibition of cyclic nucleotide biosynthetic process","type":"narrow"},{"name":"negative regulation of cyclic nucleotide anabolism","type":"exact"},{"name":"negative regulation of cyclic nucleotide biosynthesis","type":"exact"},{"name":"negative regulation of cyclic nucleotide formation","type":"exact"},{"name":"negative regulation of cyclic nucleotide synthesis","type":"exact"}],"termid":"GO:0030803"}


id: PBO:0116430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial F1-FO ATP synthase chaperone, Atp10","termid":"PBO:0116430"}


id: GO:0034034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a purine nucleoside bisphosphate, a compound consisting of a purine base linked to a deoxyribose or ribose sugar esterified with one phosphate group attached to each of two different hydroxyl groups on the sugar.","definition_xrefs":["GOC:pde","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside bisphosphate catabolic process","termid":"GO:0033869"},{"relation_name":"is_a","term_name":"purine nucleoside bisphosphate metabolic process","termid":"GO:0034032"},{"relation_name":"is_a","term_name":"purine-containing compound catabolic process","termid":"GO:0072523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"purine nucleoside bisphosphate catabolic process","synonyms":[{"name":"purine nucleoside bisphosphate breakdown","type":"exact"},{"name":"purine nucleoside bisphosphate catabolism","type":"exact"},{"name":"purine nucleoside bisphosphate degradation","type":"exact"}],"termid":"GO:0034034"}


id: FYPO:0000862
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in centromeric regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation at centromere during vegetative growth","termid":"FYPO:0008070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal histone H3-K9 dimethylation at centromere during vegetative growth","synonyms":[{"name":"normal centromeric histone H3-K9 dimethylation","type":"exact"},{"name":"normal histone H3-K9 dimethylation at centromere during mitotic cell cycle","type":"related"},{"name":"normal histone H3K9me2 at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0000862"}


id: SO:0001576
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that changes the structure of the transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_variant","termid":"SO:0001564"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"Jannovar:transcript_variant","type":"exact"},{"name":"VAAST:transcript_variant","type":"exact"},{"name":"snpEff:TRANSCRIPT","type":"exact"},{"name":"transcript variant","type":"exact"}],"termid":"SO:0001576"}


id: GO:0070281
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to pyridoxamine, 4-(aminomethyl)-5-(hydroxymethyl)-2-methylpyridin-3-ol, a form of vitamin B6.","definition_xrefs":["CHEBI:16410","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"vitamin B6 binding","termid":"GO:0070279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"pyridoxamine binding","termid":"GO:0070281"}


id: GO:0052109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the deposition of callose by the host in its cell walls, occurring as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of defense-related host cell wall callose deposition (obsolete GO:0052109)","synonyms":[{"name":"activation by symbiont of defense-related host cell wall callose deposition","type":"exact"},{"name":"positive regulation by organism of defense-related callose deposition in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by organism of defense-related cell wall callose deposition in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by symbiont of defense-related host callose deposition","type":"related"},{"name":"positive regulation by symbiont of defense-related host cell wall callose deposition","type":"related"},{"name":"stimulation by symbiont of defense-related host cell wall callose deposition","type":"related"},{"name":"up regulation by symbiont of defense-related host cell wall callose deposition","type":"related"},{"name":"up-regulation by symbiont of defense-related host cell wall callose deposition","type":"related"},{"name":"upregulation by symbiont of defense-related host cell wall callose deposition","type":"related"}],"termid":"GO:0052109"}


id: GO:0030600
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: feruloyl-polysaccharide + H2O = ferulate + polysaccharide.","definition_xrefs":["EC:3.1.1.73"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"feruloyl esterase activity","secondary_identifiers":["MetaCyc:3.1.1.73-RXN"],"synonyms":[{"name":"4-hydroxy-3-methoxycinnamoyl-sugar hydrolase activity","type":"related"},{"name":"FAE-I","type":"related"},{"name":"FAE-II","type":"related"},{"name":"FAE-III","type":"related"},{"name":"FAEA","type":"related"},{"name":"cinnAE","type":"related"},{"name":"cinnamoyl ester hydrolase activity","type":"exact"},{"name":"ferulic acid esterase activity","type":"related"},{"name":"hemicellulase accessory","type":"related"},{"name":"hydroxycinnamoyl esterase activity","type":"related"}],"termid":"GO:0030600"}


id: GO:0043800
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabino-hex-3-ulose 6-phosphate = beta-D-fructose 6-phosphate.","definition_xrefs":["RHEA:25900","PMID:11839305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"6-phospho-3-hexuloisomerase activity","secondary_identifiers":["EC:5.3.1.27","MetaCyc:R12-RXN"],"synonyms":[{"name":"HUMPI","type":"exact"},{"name":"hexulose-6-phosphate isomerase activity","type":"exact"}],"termid":"GO:0043800"}


id: PBO:0002612
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae YJR070C","termid":"PBO:0002612"}


id: PATO:0002177
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A deviation quality inhering in a bearer by virtue of the bearer's changed direction of position towards the middle.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deviation","termid":"PATO:0002175"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deviation towards the medial side","termid":"PATO:0002177"}


id: PBO:0060334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin VA","termid":"PBO:0060334"}


id: MONDO:0009170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocardial fibroelastosis and coarctation of abdominal aorta","secondary_identifiers":["MESH:C565592","OMIM:226100","MEDGEN:341665","UMLS:C1856971"],"synonyms":[{"name":"endocardial fibroelastosis and coarctation of abdominal aorta","type":"exact"}],"termid":"MONDO:0009170","xrefs":{"Monarch":{"xref_id":"0009170"}}}


id: PBO:0081406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 253","termid":"PBO:0081406"}


id: GO:0106411
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5'XMP + H20 = phosphate + xanthosine.","definition_xrefs":["PMID:34824243"],"gene_count":0,"genotype_count":0,"name":"obsolete XMP 5'-nucleosidase activity (obsolete GO:0106411)","secondary_identifiers":["MetaCyc:XMPXAN-RXN"],"termid":"GO:0106411"}


id: MONDO:0010802
data:
  {"annotated_genes":["SJAG_02730"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88031],"is_not":false,"summary":null,"term":"MONDO:0010802"}]},"cv_name":"mondo","definition":"A rare, syndromic diabetes mellitus characterized by partial pancreatic agenesis, diabetes mellitus, and heart anomalies (including transposition of the great vessels, ventricular or atrial septal defects, pulmonary stenosis, or patent ductus arteriosis).","definition_xrefs":["Orphanet:2255"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02730":null},"genotype_count":0,"is_obsolete":false,"name":"pancreatic hypoplasia-diabetes-congenital heart disease syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:722206009","UMLS:C2931296","MEDGEN:444022","MESH:C564011","GARD:347","DOID:0111733","OMIM:600001"],"synonyms":[{"name":"HDCA","type":"related"},{"name":"Yorifuji Okuno syndrome","type":"related"},{"name":"Yorifuji-Okuno syndrome","type":"exact"},{"name":"congenital pancreatic hypoplasia with diabetes mellitus and congenital heart disease","type":"related"},{"name":"heart defects, congenital, and other congenital anomalies","type":"related"},{"name":"hereditary pancreatic hypoplasia, diabetes mellitus and congenital heart disease","type":"related"},{"name":"pancreatic agenesis and congenital heart defects","type":"related"},{"name":"pancreatic hypoplasia, congenital, with diabetes mellitus and congenital heart disease","type":"related"},{"name":"pancreatic hypoplasia-diabetes-congenital heart disease syndrome","type":"exact"}],"termid":"MONDO:0010802","terms_by_termid":{"MONDO:0010802":null},"xrefs":{"Monarch":{"xref_id":"0010802"}}}


id: PBO:0005798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-X (predicted)","termid":"PBO:0005798"}


id: PBO:0040120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 7","termid":"PBO:0040120"}


id: PBO:0050857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interactor of little elongation complex ELL subunit 2 pseudogene 2","termid":"PBO:0050857"}


id: PBO:0069527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 796, pseudogene","termid":"PBO:0069527"}


id: FYPO:0007721
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of proteins via vesicles from late endosomes to the Golgi is abnormal. This process is normally mediated by the retromer complex.","definition_xrefs":["PomBase:mah","PMID:33788833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vesicle-mediated transport during vegetative growth","termid":"FYPO:0000213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein recycling from late endosome to Golgi","synonyms":[{"name":"abnormal protein recycling from endosome to Golgi by retromer","type":"exact"},{"name":"abnormal protein recycling from late endosome to Golgi during mitotic cell cycle","type":"related"},{"name":"abnormal protein recycling from late endosome to Golgi during vegetative growth","type":"exact"},{"name":"abnormal retromer-mediated protein recycling from endosome to Golgi","type":"exact"}],"termid":"FYPO:0007721"}


id: GO:0072023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the thick ascending limb over time, from its formation to the mature structure. The thick ascending limb is the last part of the loop of Henle. Its thick, mitochondria-rich epithelium characterizes the outer medulla, and is responsible for very avid active salt transport. At the macula densa, the thick ascending limb connects to the distal convoluted tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"},{"relation_name":"part_of","term_name":"distal tubule development","termid":"GO:0072017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thick ascending limb development","secondary_identifiers":["GO:0072026"],"synonyms":[{"name":"TAL development","type":"exact"}],"termid":"GO:0072023"}


id: PBO:0055515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2949","termid":"PBO:0055515"}


id: MONDO:0006401
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, aggressive carcinoma that arises from the salivary glands. It is characterized by the presence of a squamous and a glandular epithelial component.","definition_xrefs":["NCIT:C35737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosquamous carcinoma","termid":"MONDO:0006074"},{"relation_name":"is_a","term_name":"salivary gland squamous cell carcinoma","termid":"MONDO:0044740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"salivary gland adenosquamous carcinoma","secondary_identifiers":["MEDGEN:277627","UMLS:C1335894"],"synonyms":[{"name":"saliva-secreting gland adenosquamous carcinoma","type":"exact"},{"name":"salivary gland adenosquamous carcinoma","type":"exact"}],"termid":"MONDO:0006401","xrefs":{"Monarch":{"xref_id":"0006401"}}}


id: PBO:0063195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer associated transcript 14","termid":"PBO:0063195"}


id: GO:0021898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial commitment of cells whereby the developmental fate of a cell becomes restricted such that it will develop into some type of neuron in the forebrain.","definition_xrefs":["GO_REF:0000021","PMID:12626695","GOC:jid","GOC:dph","GOC:dgh","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"forebrain neuron fate commitment","termid":"GO:0021877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"commitment of multipotent stem cells to neuronal lineage in forebrain","termid":"GO:0021898"}


id: GO:0046271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of aromatic derivatives of trans-cinnamic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"phenylpropanoid metabolic process","termid":"GO:0009698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"phenylpropanoid catabolic process","synonyms":[{"name":"phenylpropanoid breakdown","type":"exact"},{"name":"phenylpropanoid catabolism","type":"exact"},{"name":"phenylpropanoid degradation","type":"exact"}],"termid":"GO:0046271"}


id: GO:0043054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Exit from the facultative diapause of the dauer (enduring) larval stage of nematode development.","definition_xrefs":["GOC:cab1","PMID:12620986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exit from diapause","termid":"GO:0071981"},{"relation_name":"part_of","term_name":"dauer larval development","termid":"GO:0040024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dauer exit","synonyms":[{"name":"exit from nematode dormancy","type":"exact"}],"termid":"GO:0043054"}


id: PBO:0090347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA mimic/ribosome assembly chaperone for Rps14","termid":"PBO:0090347"}


id: FYPO:0004783
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a histone methyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization","termid":"FYPO:0000642"},{"relation_name":"is_a","term_name":"abnormal protein methyltransferase activity","termid":"FYPO:0005723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000652","FYPO:0000002","FYPO:0000654","FYPO:0000641","FYPO:0001985","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"abnormal histone methyltransferase activity","termid":"FYPO:0004783"}


id: PBO:0043745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 7B","termid":"PBO:0043745"}


id: PBO:0077434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 168","termid":"PBO:0077434"}


id: GO:0061962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency or rate of heme oxygenase activity.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","GOC:rph","PMID:24844779"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of heme oxygenase activity (obsolete GO:0061962)","termid":"GO:0061962"}


id: MONDO:0009793
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oral-facial-digital syndrome, type 3 is characterized by anomalies of the mouth, eyes and digits, associated with severe intellectual deficit.","definition_xrefs":["Orphanet:2752"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"orofaciodigital syndrome","termid":"MONDO:0015375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"orofaciodigital syndrome III","secondary_identifiers":["SCTID:239030004","MESH:C557817","DOID:0060373","UMLS:C0406726","OMIM:258850","GARD:10518","MEDGEN:96069"],"synonyms":[{"name":"OFD syndrome 3","type":"related"},{"name":"OFD3","type":"exact"},{"name":"Ofds 3","type":"related"},{"name":"Sugarman syndrome","type":"exact"},{"name":"oral facial digital syndrome 3","type":"related"},{"name":"oral facial digital syndrome type 3","type":"related"},{"name":"oral-Facial-digital syndrome, type 3","type":"related"},{"name":"oral-facial-digital syndrome type 3","type":"exact"},{"name":"orofaciodigital syndrome 3","type":"related"},{"name":"orofaciodigital syndrome III","type":"exact"},{"name":"orofaciodigital syndrome type 3","type":"related"},{"name":"orofaciodigital syndrome type III","type":"exact"}],"termid":"MONDO:0009793","xrefs":{"Monarch":{"xref_id":"0009793"}}}


id: FYPO:0007820
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of polyphosphate measured in a cell is too low to detect.","definition_xrefs":["PMID:34147496","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"polyphosphate absent from cell","synonyms":[{"name":"polyphosphate absent from cell during mitotic cell cycle","type":"related"},{"name":"polyphosphate absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0007820"}


id: PBO:0087186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase subunit ABC10-alpha, found in RNA pol I, II, and III; relocalizes from nucleolus to cytoplasm upon DNA replication stress","termid":"PBO:0087186"}


id: MONDO:0005712
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nystagmus present at birth or caused by lesions sustained in utero or at the time of birth. It is usually pendular, and is associated with albinism and conditions characterized by early loss of central vision. Inheritance patterns may be X-linked, autosomal dominant, or recessive. (Adams et al., Principles of Neurology, 6th ed, p275)","definition_xrefs":["MESH:D020417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"pathologic nystagmus","termid":"MONDO:0004843"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital nystagmus","secondary_identifiers":["ICD10CM:H55.01","ICD9:379.51","HP:0000639","MEDGEN:195995","OMIMPS:310700","icd11.foundation:1626567380","SCTID:64635004","UMLS:C0700501","DOID:9649","EFO:0007217","Orphanet:651"],"synonyms":[{"name":"congenital idiopathic nystagmus","type":"exact"},{"name":"congenital pathologic nystagmus","type":"exact"},{"name":"motor congenital nystagmus","type":"exact"},{"name":"nystagmus","type":"broad"},{"name":"nystagmus, congenital","type":"exact"}],"termid":"MONDO:0005712","xrefs":{"Monarch":{"xref_id":"0005712"}}}


id: GO:0021842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation and reception of signals that result in the movement of interneurons away from the signal during migration from the subpallium to the cortex.","definition_xrefs":["GOC:jid","GOC:cls","GOC:dph","GO_REF:0000021","GOC:dgh","PMID:12626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative chemotaxis","termid":"GO:0050919"},{"relation_name":"part_of","term_name":"directional guidance of interneurons involved in migration from the subpallium to the cortex","termid":"GO:0021840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemorepulsion involved in interneuron migration from the subpallium to the cortex","synonyms":[{"name":"negative chemotaxis involved in interneuron migration from the subpallium to the cortex","type":"exact"}],"termid":"GO:0021842"}


id: MONDO:0000688
data:
  {"annotated_genes":["SJAG_00737","SJAG_02641","SJAG_03069","SJAG_01199","SJAG_03290","SJAG_01597","SJAG_02433","SJAG_00944","SJAG_03258","SJAG_03560","SJAG_00947","SJAG_00413"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009603"},{"annotations":[88726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009787"},{"annotations":[87132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012435"},{"annotations":[88812,88811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044723"},{"annotations":[87071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044724"},{"annotations":[88830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008760"},{"annotations":[87440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013661"},{"annotations":[88067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009666"},{"annotations":[86905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014057"},{"annotations":[88473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010184"},{"annotations":[86994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009529"}]},"cv_name":"mondo","definition":"An inherited disorder that affects the metabolism of any acidic compound containing carbon in a covalent linkage.","definition_xrefs":["NCIT:C101334"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00413":null,"SJAG_00737":null,"SJAG_00944":null,"SJAG_00947":null,"SJAG_01199":null,"SJAG_01597":null,"SJAG_02433":null,"SJAG_02641":null,"SJAG_03069":null,"SJAG_03258":null,"SJAG_03290":null,"SJAG_03560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"inborn organic aciduria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:277.89","Orphanet:289899","UMLS:C0241775","GARD:9433","DOID:0060159","MEDGEN:66037","icd11.foundation:1921636230"],"synonyms":[{"name":"disorder of organic acid metabolism","type":"broad"},{"name":"inborn error of organic acid metabolic process","type":"exact"},{"name":"inborn organic acid metabolic process disorder","type":"exact"},{"name":"inherited organic acidemia","type":"related"},{"name":"organic acid metabolism disorder","type":"broad"},{"name":"organic acidemia","type":"exact"},{"name":"organic aciduria","type":"exact"},{"name":"rare inborn error of organic acid metabolic process","type":"exact"}],"termid":"MONDO:0000688","terms_by_termid":{"MONDO:0008760":null,"MONDO:0009529":null,"MONDO:0009603":null,"MONDO:0009666":null,"MONDO:0009787":null,"MONDO:0010184":null,"MONDO:0012435":null,"MONDO:0013661":null,"MONDO:0014057":null,"MONDO:0044723":null,"MONDO:0044724":null},"xrefs":{"Monarch":{"xref_id":"0000688"}}}


id: PBO:0055227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2653","termid":"PBO:0055227"}


id: GO:0016817
data:
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id: GO:0044022
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3-serine (position 28) + ATP = histone H3-phosphoserine (position 28) + ADP. This reaction is the addition of a phosphate group to the serine residue at position 28 of histone H3.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"histone H3 kinase activity","termid":"GO:0140996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0004672","GO:0140096","GO:0003824","GO:0003674","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"histone H3S28 kinase activity","synonyms":[{"name":"histone kinase activity (H3-S28 specific)","type":"exact"},{"name":"histone serine kinase activity (H3-S28 specific)","type":"exact"},{"name":"histone-serine kinase activity (H3-S28 specific)","type":"exact"}],"termid":"GO:0044022"}


id: PBO:0049587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 clustered histone 5, pseudogene","termid":"PBO:0049587"}


id: PBO:0053718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 928","termid":"PBO:0053718"}


id: MONDO:0043468
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic eruption of fibrous papules that develop and fuse to form a thick sclerotic, hypertrophic band at a site of deep folliculitis, usually along the posterior hairline of the scalp. It is most commonly seen in men of African descent.","definition_xrefs":["NCIT:C34346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keloid","termid":"MONDO:0005348"},{"relation_name":"is_a","term_name":"folliculitis","termid":"MONDO:0006552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acne keloid","secondary_identifiers":["MEDGEN:1720","UMLS:C0001145","SCTID:238746008","MESH:D000153","ICD10CM:L73.0"],"synonyms":[{"name":"Acnes, nuchal keloid","type":"related"},{"name":"Capillitii, dermatitis papillaris","type":"related"},{"name":"Capillitius, dermatitis papillaris","type":"related"},{"name":"Keloidalis nuchae, folliculitis","type":"related"},{"name":"Keloidalis nuchae, lichen","type":"related"},{"name":"acne Keloidalis","type":"related"},{"name":"acne keloid","type":"exact"},{"name":"acne keloids","type":"related"},{"name":"acne, keloidal","type":"related"},{"name":"acne, nuchal keloid","type":"related"},{"name":"dermatitis papillaris Capillitii","type":"related"},{"name":"dermatitis papillaris Capillitius","type":"related"},{"name":"folliculitis Keloidalis","type":"related"},{"name":"folliculitis Keloidalis nuchae","type":"related"},{"name":"keloid Acnes, nuchal","type":"related"},{"name":"keloid acne, nuchal","type":"related"},{"name":"keloid, acne","type":"related"},{"name":"keloidal Acnes","type":"related"},{"name":"keloidal acne","type":"related"},{"name":"keloidal folliculitis","type":"exact"},{"name":"keloids, acne","type":"related"},{"name":"lichen Keloidalis nuchae","type":"related"},{"name":"nuchae, folliculitis Keloidalis","type":"related"},{"name":"nuchae, lichen Keloidalis","type":"related"},{"name":"nuchal keloid Acnes","type":"related"},{"name":"nuchal keloid acne","type":"related"},{"name":"papillaris Capillitii, dermatitis","type":"related"},{"name":"papillaris Capillitius, dermatitis","type":"related"}],"termid":"MONDO:0043468","xrefs":{"Monarch":{"xref_id":"0043468"}}}


id: PBO:0091026
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeleton adaptor for Rga7 GTPase activator Rng10","termid":"PBO:0091026"}


id: PBO:0083340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the uncharacterized ORF YDL010W","termid":"PBO:0083340"}


id: GO:0052582
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-pulegone + reduced [NADPH--hemoprotein reductase] + O2 = (R)-menthofuran + 2 H2O + +H+ + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:25658"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"(+)-menthofuran synthase activity","secondary_identifiers":["MetaCyc:1.14.13.104-RXN","EC:1.14.14.143","KEGG_REACTION:R08923"],"synonyms":[{"name":"(+)-MFS activity","type":"broad"},{"name":"(+)-pulegone 9-hydroxylase activity","type":"related"},{"name":"(+)-pulegone,NADPH:oxygen oxidoreductase (9-hydroxylating) activity","type":"related"},{"name":"cytochrome P450 menthofuran synthase activity","type":"related"},{"name":"menthofuran synthase activity","type":"related"}],"termid":"GO:0052582"}


id: GO:0030656
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  {"annotated_genes":["SJAG_03538","SJAG_02406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90852,115541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090180"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a vitamin, one of a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"vitamin metabolic process","termid":"GO:0006766"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02406":null,"SJAG_03538":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"regulation of vitamin metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of vitamin metabolism","type":"exact"}],"termid":"GO:0030656","terms_by_termid":{"GO:0090180":null}}


id: MONDO:0800042
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  {"annotated_genes":["SJAG_03396"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89069],"is_not":false,"summary":null,"term":"MONDO:0800042"}]},"cv_name":"mondo","definition":"A restrictive dermopathy that has material basis in homozygous or compound heterozygous mutation in the ZMPSTE24 gene on chromosome 1p34.","definition_xrefs":["DOID:0070369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"laminopathy","termid":"MONDO:0021106"},{"relation_name":"is_a","term_name":"restrictive dermopathy","termid":"MONDO:0031213"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03396":null},"genotype_count":0,"is_obsolete":false,"name":"restrictive dermopathy 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1812447","SCTID:400128006","UMLS:C5676878","MESH:C536920","OMIM:275210"],"synonyms":[{"name":"fetal hypokinesia sequence due to restrictive dermopathy","type":"exact"},{"name":"foetal hypokinesia sequence due to restrictive dermopathy","type":"exact"},{"name":"hyperkeratosis-contracture syndrome","type":"exact"},{"name":"restrictive dermopathy","type":"broad"},{"name":"restrictive dermopathy 1, lethal","type":"exact"},{"name":"restrictive dermopathy, lethal","type":"related"},{"name":"tight skin contracture syndrome, lethal","type":"exact"}],"termid":"MONDO:0800042","terms_by_termid":{"MONDO:0800042":null},"xrefs":{"Monarch":{"xref_id":"0800042"}}}


id: GO:0003706
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Functions to enable the transcription of specific, or specific sets, of genes by RNA polymerase II in response to a ligand.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete ligand-regulated transcription factor activity (obsolete GO:0003706)","synonyms":[{"name":"ligand-regulated transcription factor activity","type":"exact"}],"termid":"GO:0003706"}


id: PBO:0051767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IPO9 antisense RNA 1","termid":"PBO:0051767"}


id: GO:0170011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A molecule that recognizes stalled ribosomes and initiates a signaling response.","definition_xrefs":["PMID:32289254","PMID:36638793","PMID:32610081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular sensor activity","termid":"GO:0140299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140299"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0140299"],"is_obsolete":false,"name":"stalled ribosome sensor activity","termid":"GO:0170011"}


id: MONDO:0012131
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaphyseal undermodeling, spondylar dysplasia, and overgrowth","secondary_identifiers":["MEDGEN:373306","OMIM:608811","GARD:10066","MESH:C537355","Orphanet:498485","UMLS:C1837316"],"synonyms":[{"name":"metaphyseal undermodeling, spondylar dysplasia, and overgrowth","type":"exact"},{"name":"overgrowth-metaphyseal undermodeling-spondylar dysplasia syndrome","type":"exact"}],"termid":"MONDO:0012131","xrefs":{"Monarch":{"xref_id":"0012131"}}}


id: MONDO:0020266
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genodermatosis with ocular features (obsolete MONDO:0020266)","secondary_identifiers":["Orphanet:98696"],"termid":"MONDO:0020266","xrefs":{"Monarch":{"xref_id":"0020266"}}}


id: GO:0015371
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: galactose(out) + Na+(out) = glucose(in) + Na+(in).","definition_xrefs":["TC:2.A.21.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose transmembrane transporter activity","termid":"GO:0005354"},{"relation_name":"is_a","term_name":"carbohydrate:monoatomic cation symporter activity","termid":"GO:0005402"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"galactose:sodium symporter activity","termid":"GO:0015371"}


id: PBO:0062060
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily X member 1 pseudogene","termid":"PBO:0062060"}


id: PBO:0085200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Outer kinetochore protein, needed for accurate chromosome segregation; component of kinetochore sub-complex COMA (Ctf19p, Okp1p, Mcm21p, Ame1p) that functions as platform for kinetochore assembly; required for spindle assembly checkpoint; minimizes potentially deleterious centromere-proximal crossovers by preventing meiotic DNA break formation proximal to centromere; homolog of human centromere constitutive-associated network (CCAN) subunit CENP-P and fission yeast fta2","termid":"PBO:0085200"}


id: GO:1900463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of cellular response to alkalinity by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf","PMID:12509465","GOC:TermGenie","PMID:17023428"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular response to alkaline pH by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900463)","synonyms":[{"name":"negative regulation of cellular response to alkalinity by negative regulation of transcription from RNA polymerase II promoter","type":"broad"},{"name":"negative regulation of cellular response to basic pH by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900463"}


id: PBO:0077012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THBS1 intronic transcript 1","termid":"PBO:0077012"}


id: PBO:0111923
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin Kip3 subfamily","termid":"PBO:0111923"}


id: PBO:0064277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology, MyTH4 and FERM domain containing H3","termid":"PBO:0064277"}


id: GO:2000162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of planar cell polarity pathway involved in cardiac right atrium morphogenesis.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of planar cell polarity pathway involved in cardiac right atrium morphogenesis (obsolete GO:2000162)","termid":"GO:2000162"}


id: PBO:0030401
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_SAGA_complex_assembly","termid":"PBO:0030401"}


id: PBO:0091521
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mcs4-Associated Kinase","termid":"PBO:0091521"}


id: MONDO:0005196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Presence of structurally anomalous spermatozoa in the semen; malformations include the physical bending of the sperm to produce kinks or bends","definition_xrefs":["EFO:0002625"],"gene_count":0,"genotype_count":0,"name":"obsolete teratozoospermia (obsolete MONDO:0005196)","secondary_identifiers":["SCTID:236817003"],"termid":"MONDO:0005196","xrefs":{"Monarch":{"xref_id":"0005196"}}}


id: MONDO:0032663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"genetic developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 70","secondary_identifiers":["MEDGEN:1648407","DOID:0112206","OMIM:618298","GARD:16336","UMLS:C4749023"],"synonyms":[{"name":"DEE70","type":"exact"},{"name":"EIEE70","type":"exact"},{"name":"EPILEPTIC ENCEPHALOPATHY, EARLY INFANTILE, 70","type":"exact"},{"name":"developmental and epileptic encephalopathy 70","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 70","type":"exact"}],"termid":"MONDO:0032663","xrefs":{"Monarch":{"xref_id":"0032663"}}}


id: GO:0006128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidized glutathione reduction (obsolete GO:0006128)","synonyms":[{"name":"oxidized glutathione reduction","type":"exact"}],"termid":"GO:0006128"}


id: GO:0008777
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N2-acetyl-L-ornithine + H2O = acetate + L-ornithine.","definition_xrefs":["EC:3.5.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0003824","GO:0016787","GO:0019213"],"is_obsolete":false,"name":"acetylornithine deacetylase activity","secondary_identifiers":["MetaCyc:ACETYLORNDEACET-RXN","RHEA:15941"],"synonyms":[{"name":"2-N-acetyl-L-ornithine amidohydrolase activity","type":"related"},{"name":"N-acetylornithinase activity","type":"broad"},{"name":"N2-acetyl-L-ornithine amidohydrolase activity","type":"related"},{"name":"acetylornithinase activity","type":"broad"}],"termid":"GO:0008777"}


id: MONDO:0010483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked Mental retardation Cantagrel type is characterized by marked neonatal hypotonia, progressive quadriparesia, severely delayed developmental milestones (walking at 3 years of age), gastroesophageal reflux, stereotypic movements of the hands, esotropia and infantile autism.","definition_xrefs":["Orphanet:85277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked intellectual disability, Cantagrel type","secondary_identifiers":["GARD:16743","MEDGEN:813060","OMIM:300912","SCTID:719016007","UMLS:C3806730","DOID:0112044"],"synonyms":[{"name":"MRX98","type":"related"},{"name":"intellectual developmental disorder, X-linked 98, X-linked dominant","type":"exact"},{"name":"intellectual disability, X-linked 98","type":"related"},{"name":"intellectual disability, X-linked type 98","type":"exact"},{"name":"mental retardation, X-linked 98","type":"related"},{"name":"mental retardation, X-linked type 98","type":"exact"}],"termid":"MONDO:0010483","xrefs":{"Monarch":{"xref_id":"0010483"}}}


id: PBO:0062770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily X member 1 pseudogene","termid":"PBO:0062770"}


id: GO:0035207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of hemocyte proliferation. Hemocytes are blood cells associated with a hemocoel (the cavity containing most of the major organs of the arthropod body) which are involved in defense and clotting of hemolymph, but not involved in transport of oxygen. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of hemocyte proliferation","termid":"GO:0035206"},{"relation_name":"negatively_regulates","term_name":"hemocyte proliferation","termid":"GO:0035172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hemocyte proliferation","synonyms":[{"name":"down regulation of hemocyte proliferation","type":"exact"},{"name":"down-regulation of hemocyte proliferation","type":"exact"},{"name":"downregulation of hemocyte proliferation","type":"exact"},{"name":"inhibition of hemocyte proliferation","type":"narrow"},{"name":"negative regulation of arthropod blood cell proliferation","type":"exact"}],"termid":"GO:0035207"}


id: GO:1903250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of citrulline biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:rl","GO_REF:0000058","PMID:19278978","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of citrulline biosynthetic process","termid":"GO:1903248"},{"relation_name":"is_a","term_name":"positive regulation of amino acid biosynthetic process","termid":"GO:2000284"},{"relation_name":"positively_regulates","term_name":"citrulline biosynthetic process","termid":"GO:0019240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of citrulline biosynthetic process","synonyms":[{"name":"activation of citrulline anabolism","type":"narrow"},{"name":"activation of citrulline biosynthesis","type":"narrow"},{"name":"activation of citrulline biosynthetic process","type":"narrow"},{"name":"activation of citrulline formation","type":"narrow"},{"name":"activation of citrulline synthesis","type":"narrow"},{"name":"positive regulation of citrulline anabolism","type":"exact"},{"name":"positive regulation of citrulline biosynthesis","type":"exact"},{"name":"positive regulation of citrulline formation","type":"exact"},{"name":"positive regulation of citrulline synthesis","type":"exact"},{"name":"up regulation of citrulline anabolism","type":"exact"},{"name":"up regulation of citrulline biosynthesis","type":"exact"},{"name":"up regulation of citrulline biosynthetic process","type":"exact"},{"name":"up regulation of citrulline formation","type":"exact"},{"name":"up regulation of citrulline synthesis","type":"exact"},{"name":"up-regulation of citrulline anabolism","type":"exact"},{"name":"up-regulation of citrulline biosynthesis","type":"exact"},{"name":"up-regulation of citrulline biosynthetic process","type":"exact"},{"name":"up-regulation of citrulline formation","type":"exact"},{"name":"up-regulation of citrulline synthesis","type":"exact"},{"name":"upregulation of citrulline anabolism","type":"exact"},{"name":"upregulation of citrulline biosynthesis","type":"exact"},{"name":"upregulation of citrulline biosynthetic process","type":"exact"},{"name":"upregulation of citrulline formation","type":"exact"},{"name":"upregulation of citrulline synthesis","type":"exact"}],"termid":"GO:1903250"}


id: PBO:0080200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VENTX pseudogene 8","termid":"PBO:0080200"}


id: GO:0070147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling cysteine to cysteinyl-tRNA in a mitochondrion, catalyzed by cysteinyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteinyl-tRNA aminoacylation","termid":"GO:0006423"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0140053","GO:0006520","GO:0010467"],"is_obsolete":false,"name":"mitochondrial cysteinyl-tRNA aminoacylation","termid":"GO:0070147"}


id: PR:Q7LKV3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sen15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q7LKV3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease subunit sen15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC959.10","synonyms":[{"name":"Spom972h-sen15","type":"exact"},{"name":"tRNA-intron endonuclease sen15 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q7LKV3"}


id: GO:0002666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of T cell tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tolerance induction","termid":"GO:0002645"},{"relation_name":"is_a","term_name":"regulation of T cell tolerance induction","termid":"GO:0002664"},{"relation_name":"positively_regulates","term_name":"T cell tolerance induction","termid":"GO:0002517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell tolerance induction","synonyms":[{"name":"activation of T cell tolerance induction","type":"narrow"},{"name":"positive regulation of T lymphocyte tolerance induction","type":"exact"},{"name":"positive regulation of T-cell tolerance induction","type":"exact"},{"name":"positive regulation of T-lymphocyte tolerance induction","type":"exact"},{"name":"stimulation of T cell tolerance induction","type":"narrow"},{"name":"up regulation of T cell tolerance induction","type":"exact"},{"name":"up-regulation of T cell tolerance induction","type":"exact"},{"name":"upregulation of T cell tolerance induction","type":"exact"}],"termid":"GO:0002666"}


id: GO:0102083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydromonapterin = glycolaldehyde + 2-amino-6-(hydroxymethyl)-7,8-dihydropteridin-4-ol.","definition_xrefs":["PMID:15107504","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"7,8-dihydromonapterin aldolase activity","secondary_identifiers":["MetaCyc:RXN-10857"],"termid":"GO:0102083"}


id: GO:0034453
data:
  {"annotated_genes":["SJAG_01546","SJAG_03835","SJAG_01613","SJAG_03116","SJAG_03062"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990734"},{"annotations":[98582,75825,104871,101037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990810"}]},"cv_name":"biological_process","definition":"Any process in which a microtubule is maintained in a specific location in a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01546":null,"SJAG_01613":null,"SJAG_03062":null,"SJAG_03116":null,"SJAG_03835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"microtubule anchoring","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0034453","terms_by_termid":{"GO:1990734":null,"GO:1990810":null}}


id: PBO:0041285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1QTNF9 antisense RNA 1","termid":"PBO:0041285"}


id: PBO:0000009
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-dependent_on","termid":"PBO:0000009"}


id: GO:0006414
data:
  {"annotated_genes":["SJAG_04351","SJAG_00579","SJAG_04157","SJAG_04168","SJAG_03189","SJAG_04174","SJAG_04204","SJAG_04756","SJAG_03106","SJAG_02020","SJAG_02353","SJAG_04452","SJAG_03677","SJAG_05000","SJAG_00188","SJAG_02812","SJAG_00898","SJAG_03863","SJAG_02738","SJAG_01128","SJAG_00541","SJAG_01536","SJAG_04029","SJAG_02017","SJAG_00468","SJAG_01851","SJAG_02180","SJAG_02189","SJAG_03094","SJAG_02871","SJAG_05271","SJAG_01497","SJAG_01438","SJAG_05332","SJAG_03428","SJAG_02096","SJAG_02243","SJAG_01074","SJAG_04847","SJAG_02493","SJAG_01411","SJAG_03922","SJAG_02585","SJAG_03461","SJAG_02746","SJAG_04020"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62389,65709],"is_not":false,"summary":null,"term":"GO:0006414"},{"annotations":[116271],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0140708"},{"annotations":[109731,58450,69185,107386,111001,111002,97160,118156,116584,120787,67464,120835,120836,100143,98518,117580,120353,115728,106925,118816,107231,118155,120786,100144,107232,70648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002182"},{"annotations":[75387,81711,81860,93803],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070125"},{"annotations":[77097],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2001125"},{"annotations":[67841,70301],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0045901"},{"annotations":[111999,97280,111334,115828],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0140018"},{"annotations":[104953,79942,105431,71582,77098,78365,65402,107463,117947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072344"},{"annotations":[67845,70305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006452"}]},"cv_name":"biological_process","definition":"The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"part_of","term_name":"translation","termid":"GO:0006412"}],"gene_count":46,"genes_by_uniquename":{"SJAG_00188":null,"SJAG_00468":null,"SJAG_00541":null,"SJAG_00579":null,"SJAG_00898":null,"SJAG_01074":null,"SJAG_01128":null,"SJAG_01411":null,"SJAG_01438":null,"SJAG_01497":null,"SJAG_01536":null,"SJAG_01851":null,"SJAG_02017":null,"SJAG_02020":null,"SJAG_02096":null,"SJAG_02180":null,"SJAG_02189":null,"SJAG_02243":null,"SJAG_02353":null,"SJAG_02493":null,"SJAG_02585":null,"SJAG_02738":null,"SJAG_02746":null,"SJAG_02812":null,"SJAG_02871":null,"SJAG_03094":null,"SJAG_03106":null,"SJAG_03189":null,"SJAG_03428":null,"SJAG_03461":null,"SJAG_03677":null,"SJAG_03863":null,"SJAG_03922":null,"SJAG_04020":null,"SJAG_04029":null,"SJAG_04157":null,"SJAG_04168":null,"SJAG_04174":null,"SJAG_04204":null,"SJAG_04351":null,"SJAG_04452":null,"SJAG_04756":null,"SJAG_04847":null,"SJAG_05000":null,"SJAG_05271":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"translational elongation","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0006442","GO:0006455","Reactome:R-HSA-156842"],"synonyms":[{"name":"protein synthesis elongation","type":"broad"},{"name":"translation elongation","type":"exact"}],"termid":"GO:0006414","terms_by_termid":{"GO:0002182":null,"GO:0006414":null,"GO:0006452":null,"GO:0045901":null,"GO:0070125":null,"GO:0072344":null,"GO:0140018":null,"GO:0140708":null,"GO:2001125":null}}


id: MONDO:0016771
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Annular atrophic lichen planus (LP) is a rare variant of cutaneous lichen planus characterized by both annular and atrophic LP features in the same lesion.","definition_xrefs":["Orphanet:254411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lichen planus","termid":"MONDO:0006572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"annular atrophic lichen planus","secondary_identifiers":["UMLS:C4304037","GARD:12676","MEDGEN:929706","SCTID:720493003"],"synonyms":[{"name":"annular atrophic LP","type":"exact"}],"termid":"MONDO:0016771","xrefs":{"Monarch":{"xref_id":"0016771"}}}


id: MONDO:0016471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pachyonychia congenita (PC) is a rare genodermatosis predominantly featuring painful palmoplantar keratoderma, thickened nails, cysts and whitish oral mucosa.","definition_xrefs":["Orphanet:2309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal palmoplantar keratoderma","termid":"MONDO:0017672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pachyonychia congenita","secondary_identifiers":["UMLS:C0265334","icd11.foundation:1446983705","DOID:0050449","NORD:1542","MEDGEN:78556","GARD:10753","OMIMPS:167200","NCIT:C84986","MESH:D053549"],"synonyms":[{"name":"Jackson-Lawler type pachyonychia congenita","type":"exact"},{"name":"Jadassohn-Lewandowsky syndrome","type":"exact"},{"name":"PC","type":"exact"},{"name":"congenital pachyonychia","type":"related"},{"name":"pachyonychia congenita syndrome","type":"related"},{"name":"pachyonychia congenita type 1","type":"narrow"},{"name":"pachyonychia congenita, Jadassohn-Lewandowsky type","type":"exact"}],"termid":"MONDO:0016471","xrefs":{"Monarch":{"xref_id":"0016471"}}}


id: GO:0008607
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Modulation of the activity of the enzyme phosphorylase kinase.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase regulator activity","termid":"GO:0019887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"phosphorylase kinase regulator activity","synonyms":[{"name":"phosphorylase kinase, intrinsic regulator activity","type":"narrow"}],"termid":"GO:0008607"}


id: GO:0004775
data:
  {"annotated_genes":["SJAG_01524","SJAG_03813"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73497,77073],"is_not":false,"summary":null,"term":"GO:0004775"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + succinate + CoA = ADP + succinyl-CoA + phosphate.","definition_xrefs":["PMID:9874242","RHEA:17661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinate-CoA ligase activity","termid":"GO:0004774"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01524":null,"SJAG_03813":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"succinate-CoA ligase (ADP-forming) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:6.2.1.5","KEGG_REACTION:R00405","Reactome:R-HSA-70997","MetaCyc:SUCCCOASYN-RXN"],"synonyms":[{"name":"succinate thiokinase activity","type":"related"},{"name":"succinic thiokinase","type":"broad"},{"name":"succinyl coenzyme A synthetase","type":"broad"},{"name":"succinyl coenzyme A synthetase (adenosine diphosphate-forming) activity","type":"related"},{"name":"succinyl-CoA synthetase (ADP-forming) activity","type":"related"},{"name":"succinyl-CoA synthetase activity","type":"related"}],"termid":"GO:0004775","terms_by_termid":{"GO:0004775":null}}


id: PATO:0000107
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000107 alkali sensitivity (obsolete PATO:0000107)","termid":"PATO:0000107"}


id: GO:0048102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A form of programmed cell death that is accompanied by the formation of autophagosomes. Autophagic cell death is characterized by lack of chromatin condensation and massive vacuolization of the cytoplasm, with little or no uptake by phagocytic cells.","definition_xrefs":["PMID:18846107","GOC:autophagy","GOC:mah","GOC:mtg_apoptosis","PMID:23347517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"autophagic cell death","synonyms":[{"name":"autophagic death","type":"broad"},{"name":"autosis","type":"related"},{"name":"programmed cell death by autophagy","type":"broad"},{"name":"programmed cell death by macroautophagy","type":"exact"},{"name":"type II programmed cell death","type":"related"}],"termid":"GO:0048102"}


id: GO:1990241
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that interacts selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. An example of this is STING in E. coli (Q86WV6).","definition_xrefs":["GOC:bhm","PMID:23910378"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleotide binding complex (obsolete GO:1990241)","synonyms":[{"name":"nucleotide binding complex","type":"exact"}],"termid":"GO:1990241"}


id: GO:2001015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of skeletal muscle cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle cell differentiation","termid":"GO:2001014"},{"relation_name":"negatively_regulates","term_name":"skeletal muscle cell differentiation","termid":"GO:0035914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of skeletal muscle cell differentiation","termid":"GO:2001015"}


id: PBO:0040838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BLACAT1 overlapping LEMD1 locus","termid":"PBO:0040838"}


id: MONDO:0019571
data:
  {"annotated_genes":["SJAG_03457","SJAG_00660"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87779,87780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014706"}]},"cv_name":"mondo","definition":"Autosomal dominant cutis laxa (ADCL) is a connective tissue disorder characterized by wrinkled, redundant and sagging inelastic skin associated in some cases with internal organ involvement.","definition_xrefs":["Orphanet:90348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"inherited cutis laxa","termid":"MONDO:0100237"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00660":null,"SJAG_03457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant cutis laxa","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C562627","GARD:1639","UMLS:C0268350","icd11.foundation:720393698","DOID:0070142","MEDGEN:120630","SCTID:111388003"],"synonyms":[{"name":"ADCL","type":"exact"},{"name":"cutis laxa, autosomal dominant","type":"exact"}],"termid":"MONDO:0019571","terms_by_termid":{"MONDO:0014706":null},"xrefs":{"Monarch":{"xref_id":"0019571"}}}


id: SO:0001859
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence CCCCTC, bound by the PKA-responsive zinc finger transcription factor Rst2.","definition_xrefs":["PMID:11739717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STREP_motif","synonyms":[{"name":"STREP motif","type":"related"},{"name":"stress-starvation response element of Schizosaccharomyces pombe","type":"exact"}],"termid":"SO:0001859"}


id: PBO:0001009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetate transmembrane transporter (predicted)","termid":"PBO:0001009"}


id: FYPO:0001672
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a GTPase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"normal GTPase activity","termid":"FYPO:0001672"}


id: MONDO:0015577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of parasitic infection that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare parasitic disease (obsolete MONDO:0015577)","secondary_identifiers":["Orphanet:163588"],"synonyms":[{"name":"rare parasitic infection","type":"exact"},{"name":"rare parasitic infectious disease","type":"exact"}],"termid":"MONDO:0015577","xrefs":{"Monarch":{"xref_id":"0015577"}}}


id: PBO:0083327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF SRC1/YML034W","termid":"PBO:0083327"}


id: PBO:0088604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1 repeat protein","termid":"PBO:0088604"}


id: GO:0097009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the balance between food intake (energy input) and energy expenditure.","definition_xrefs":["GOC:yaf","PMID:15919751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal-level homeostasis","termid":"GO:0048871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"energy homeostasis","secondary_identifiers":["GO:2000506","GO:2000507","GO:2000505"],"synonyms":[{"name":"negative regulation of energy homeostasis","type":"related"},{"name":"positive regulation of energy homeostasis","type":"related"},{"name":"regulation of energy homeostasis","type":"related"}],"termid":"GO:0097009"}


id: PBO:0060995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nescient helix-loop-helix 2","termid":"PBO:0060995"}


id: GO:0001678
data:
  {"annotated_genes":["SJAG_04495","SJAG_00574","SJAG_01699","SJAG_04334","SJAG_04312","SJAG_04026","SJAG_00472","SJAG_01254","SJAG_02444","SJAG_01754","SJAG_03081"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71951,77833],"is_not":false,"summary":null,"term":"GO:0001678"},{"annotations":[111365,108328,96037,117393,118423,103666,110854,108678,107732],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of glucose within a cell.","definition_xrefs":["GOC:dph","GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose homeostasis","termid":"GO:0042593"},{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00472":null,"SJAG_00574":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02444":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null,"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular glucose homeostasis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cell glucose homeostasis","type":"exact"},{"name":"cellular glucose homeostasis","type":"exact"}],"termid":"GO:0001678","terms_by_termid":{"GO:0001678":null,"GO:0010619":null}}


id: PBO:0075757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRR1 domain containing","termid":"PBO:0075757"}


id: GO:0099505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the potential difference across a presynaptic membrane.","definition_xrefs":["GOC:dph","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of presynaptic membrane potential","synonyms":[{"name":"regulation of pre-synaptic membrane potential","type":"exact"}],"termid":"GO:0099505"}


id: PBO:0061407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPSR1 antisense RNA 1","termid":"PBO:0061407"}


id: GO:1902586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An intercellular transport which involves another organism.","definition_xrefs":["GOC:TermGenie","GO_REF:0000089","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism intercellular transport (obsolete GO:1902586)","synonyms":[{"name":"multi organism intercellular transport","type":"exact"}],"termid":"GO:1902586"}


id: PBO:0074302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLX1 homolog B, structure-specific endonuclease subunit","termid":"PBO:0074302"}


id: MONDO:0859588
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A keratosis pilaris atrophicans that is characterized by scar-like follicular depressions and loss of hair primarily in the eyebrow area.","definition_xrefs":["DOID:0080752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keratosis pilaris atrophicans","termid":"MONDO:0018855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"keratosis pilaris atrophicans faciei","termid":"MONDO:0859588","xrefs":{"Monarch":{"xref_id":"0859588"}}}


id: FYPO:0009082
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a combination of potassium chloride and methyl methanesulfonate. Cells stop growing (and may die) at concentrations of potassium chloride and methyl methanesulfonate that allow wild type cells to grow.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0002683","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to potassium chloride and methyl methanesulfonate","synonyms":[{"name":"hypersensitive to potassium chloride and MMS","type":"exact"},{"name":"hypersensitive to potassium chloride and methyl methanesulfonate","type":"exact"},{"name":"sensitive to potassium chloride and MMS","type":"exact"},{"name":"sensitive to potassium chloride and MMS during vegetative growth","type":"exact"},{"name":"sensitive to potassium chloride and MMS in combination","type":"exact"},{"name":"sensitive to potassium chloride and methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"sensitive to potassium chloride and methyl methanesulfonate in combination","type":"exact"}],"termid":"FYPO:0009082"}


id: MONDO:0019672
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fibular hemimelia is a congenital longitudinal limb deficiency characterized by complete or partial absence of the fibula bone.","definition_xrefs":["Orphanet:93323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemimelia","termid":"MONDO:0016240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"fibular hemimelia","secondary_identifiers":["MEDGEN:539380","icd11.foundation:915482054","UMLS:C0265634","GARD:8659"],"synonyms":[{"name":"congenital longitudinal deficiency of the fibula","type":"exact"},{"name":"fibular longitudinal meromelia","type":"exact"}],"termid":"MONDO:0019672","xrefs":{"Monarch":{"xref_id":"0019672"}}}


id: PBO:0079111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA splicing endonuclease subunit 2 pseudogene 1","termid":"PBO:0079111"}


id: GO:0099148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synaptic vesicle docking.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle docking","termid":"GO:0106020"},{"relation_name":"regulates","term_name":"synaptic vesicle docking","termid":"GO:0016081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0140056"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0140056","GO:0008150"],"is_obsolete":false,"name":"regulation of synaptic vesicle docking","termid":"GO:0099148"}


id: PBO:0043349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colipase like 2","termid":"PBO:0043349"}


id: PBO:0026979
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-excess_prospore_membrane_present","termid":"PBO:0026979"}


id: PBO:0050447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein U like 1","termid":"PBO:0050447"}


id: GO:0180016
data:
  {"annotated_genes":["SJAG_00177"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107567],"is_not":false,"summary":null,"term":"GO:0180016"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of a SUMO ligase.","definition_xrefs":["PMID:19363481","PMID:33446573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase regulator activity","termid":"GO:0055103"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00177":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0030234","GO:0098772"],"is_obsolete":false,"name":"SUMO ligase regulator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180016","terms_by_termid":{"GO:0180016":null}}


id: PBO:0001907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tryptophan-tRNA ligase Msw1 (predicted)","termid":"PBO:0001907"}


id: PBO:0053888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1168","termid":"PBO:0053888"}


id: GO:1904782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of NMDA glutamate receptor activity.","definition_xrefs":["GOC:mr","GO_REF:0000059","PMID:12857","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ion transmembrane transporter activity","termid":"GO:0032413"},{"relation_name":"is_a","term_name":"negative regulation of signaling receptor activity","termid":"GO:2000272"},{"relation_name":"is_a","term_name":"regulation of NMDA receptor activity","termid":"GO:2000310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"negative regulation of NMDA glutamate receptor activity","synonyms":[{"name":"down regulation of N-methyl-D-aspartate selective glutamate receptor activity","type":"exact"},{"name":"down regulation of NMDA glutamate receptor activity","type":"exact"},{"name":"down regulation of NMDA receptor","type":"exact"},{"name":"down-regulation of N-methyl-D-aspartate selective glutamate receptor activity","type":"exact"},{"name":"down-regulation of NMDA glutamate receptor activity","type":"exact"},{"name":"down-regulation of NMDA receptor","type":"exact"},{"name":"downregulation of N-methyl-D-aspartate selective glutamate receptor activity","type":"exact"},{"name":"downregulation of NMDA glutamate receptor activity","type":"exact"},{"name":"downregulation of NMDA receptor","type":"exact"},{"name":"inhibition of N-methyl-D-aspartate selective glutamate receptor activity","type":"narrow"},{"name":"inhibition of NMDA glutamate receptor activity","type":"narrow"},{"name":"inhibition of NMDA receptor","type":"narrow"},{"name":"negative regulation of N-methyl-D-aspartate selective glutamate receptor activity","type":"exact"},{"name":"negative regulation of NMDA receptor","type":"exact"}],"termid":"GO:1904782"}


id: PBO:0070068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 25, pseudogene","termid":"PBO:0070068"}


id: GO:0010451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of a floral meristem, a population of undifferentiated cells in a plant that gives rise to a flower.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"meristem growth","termid":"GO:0035266"},{"relation_name":"part_of","term_name":"flower development","termid":"GO:0009908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"floral meristem growth","termid":"GO:0010451"}


id: GO:1904650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fat cell apoptotic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:17024416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"is_a","term_name":"regulation of fat cell apoptotic process","termid":"GO:1904649"},{"relation_name":"negatively_regulates","term_name":"fat cell apoptotic process","termid":"GO:1904606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of fat cell apoptotic process","synonyms":[{"name":"down regulation of adipocyte apoptosis","type":"narrow"},{"name":"down regulation of adipocyte apoptotic process","type":"exact"},{"name":"down regulation of adipose cell apoptosis","type":"narrow"},{"name":"down regulation of adipose cell apoptotic process","type":"exact"},{"name":"down regulation of fat cell apoptosis","type":"narrow"},{"name":"down regulation of fat cell apoptotic process","type":"exact"},{"name":"down-regulation of adipocyte apoptosis","type":"narrow"},{"name":"down-regulation of adipocyte apoptotic process","type":"exact"},{"name":"down-regulation of adipose cell apoptosis","type":"narrow"},{"name":"down-regulation of adipose cell apoptotic process","type":"exact"},{"name":"down-regulation of fat cell apoptosis","type":"narrow"},{"name":"down-regulation of fat cell apoptotic process","type":"exact"},{"name":"downregulation of adipocyte apoptosis","type":"narrow"},{"name":"downregulation of adipocyte apoptotic process","type":"exact"},{"name":"downregulation of adipose cell apoptosis","type":"narrow"},{"name":"downregulation of adipose cell apoptotic process","type":"exact"},{"name":"downregulation of fat cell apoptosis","type":"narrow"},{"name":"downregulation of fat cell apoptotic process","type":"exact"},{"name":"inhibition of adipocyte apoptosis","type":"narrow"},{"name":"inhibition of adipocyte apoptotic process","type":"narrow"},{"name":"inhibition of adipose cell apoptosis","type":"narrow"},{"name":"inhibition of adipose cell apoptotic process","type":"narrow"},{"name":"inhibition of fat cell apoptosis","type":"narrow"},{"name":"inhibition of fat cell apoptotic process","type":"narrow"},{"name":"negative regulation of adipocyte apoptosis","type":"narrow"},{"name":"negative regulation of adipocyte apoptotic process","type":"exact"},{"name":"negative regulation of adipose cell apoptosis","type":"narrow"},{"name":"negative regulation of adipose cell apoptotic process","type":"exact"},{"name":"negative regulation of fat cell apoptosis","type":"narrow"}],"termid":"GO:1904650"}


id: PBO:0004642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Slh1 (predicted)","termid":"PBO:0004642"}


id: PR:O13743
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pos1 gene.","definition_xrefs":["UniProtKB:O13743","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16E8.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.08","synonyms":[{"name":"Spom972h-pos1","type":"exact"}],"termid":"PR:O13743"}


id: GO:0009845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The physiological and developmental changes that occur in a seed commencing with water uptake (imbibition) and terminating with the elongation of the embryonic axis.","definition_xrefs":["PMID:8281041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"seedling development","termid":"GO:0090351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seed germination","secondary_identifiers":["Wikipedia:Germination#Seed_germination"],"termid":"GO:0009845"}


id: PBO:0044217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTTNBP2 N-terminal like","termid":"PBO:0044217"}


id: PBO:0079473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twist family bHLH transcription factor 1","termid":"PBO:0079473"}


id: PBO:0087744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SWI/SNF chromatin remodeling complex; regulates transcription by remodeling chromatin; required for transcription of many genes, including ADH1, ADH2, GAL1, HO, INO1 and SUC2; self-assembles to form [SWI+] prion and to alter expression pattern; human homolog ARID1A is a candidate tumor suppressor gene in breast cancer","termid":"PBO:0087744"}


id: PBO:0084456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannosyltransferase; involved in asparagine-linked glycosylation in the endoplasmic reticulum (ER); essential for viability; human homolog ALG1 complements yeast null mutant","termid":"PBO:0084456"}


id: PBO:0041202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BUD31 homolog pseudogene 2","termid":"PBO:0041202"}


id: GO:0003009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. In the skeletal muscle, the muscle contraction takes advantage of an ordered sarcomeric structure and in most cases it is under voluntary control.","definition_xrefs":["GOC:mtg_cardio","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle contraction","termid":"GO:0006941"},{"relation_name":"part_of","term_name":"musculoskeletal movement","termid":"GO:0050881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle contraction","termid":"GO:0003009"}


id: GO:1902318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any synthesis of RNA primer that is involved in nuclear cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete synthesis of RNA primer involved in nuclear cell cycle DNA replication (obsolete GO:1902318)","synonyms":[{"name":"DNA replication, synthesis of RNA primer involved in DNA replication during S phase","type":"related"},{"name":"DNA replication, synthesis of RNA primer involved in DNA replication involved in S phase","type":"exact"},{"name":"DNA replication, synthesis of RNA primer involved in DNA replication involved in S-phase","type":"exact"},{"name":"replication priming involved in DNA replication during S phase","type":"related"},{"name":"replication priming involved in DNA replication involved in S phase","type":"related"},{"name":"replication priming involved in DNA replication involved in S-phase","type":"related"},{"name":"replication priming involved in nuclear cell cycle DNA replication","type":"related"}],"termid":"GO:1902318"}


id: PBO:0084170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Highly conserved zinc metalloprotease; component of the ER quality control mechanism that removes faulty proteins clogging translocation channels; inhibits SRP-independent translocation into the ER; has two roles in a-factor maturation, C-terminal CAAX proteolysis and the first step of N-terminal proteolytic processing; cleaves isoprenylated and non-prenylated oligopeptides; human homolog ZMPSTE24 implicated in mandibuloacral dysplasia (MAD), and complements the null mutant","termid":"PBO:0084170"}


id: FYPO:0000764
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of cycloheximide than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002682","FYPO:0000139","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"resistance to cycloheximide","synonyms":[{"name":"resistance to cycloheximide during mitotic cell cycle","type":"related"},{"name":"resistance to cycloheximide during vegetative growth","type":"exact"},{"name":"resistant to cycloheximide","type":"exact"}],"termid":"FYPO:0000764"}


id: MONDO:0002434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer involving a oculomotor nerve.","definition_xrefs":["MONDO:patterns/cancer"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant cranial nerve neoplasm","termid":"MONDO:0002433"},{"relation_name":"is_a","term_name":"oculomotor nerve neoplasm","termid":"MONDO:0002435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"oculomotor nerve cancer","secondary_identifiers":["NCIT:C6995","UMLS:C0686417","DOID:2816","MEDGEN:195786","SCTID:93929003"],"synonyms":[{"name":"IIIrd cranial nerve neoplasm, malignant","type":"exact"},{"name":"cancer of oculomotor nerve","type":"exact"},{"name":"malignant neoplasm of oculomotor nerve","type":"exact"},{"name":"malignant oculomotor nerve neoplasm","type":"exact"},{"name":"malignant oculomotor nerve tumor","type":"related"},{"name":"malignant oculomotor nerve tumour","type":"related"},{"name":"oculomotor nerve cancer","type":"exact"},{"name":"oculomotor nerve neoplasm, malignant","type":"exact"},{"name":"primary malignant neoplasm of oculomotor nerve","type":"exact"}],"termid":"MONDO:0002434","xrefs":{"Monarch":{"xref_id":"0002434"}}}


id: MONDO:0013595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperbiliverdinemia is a rare, genetic hepatic disease characterized by the presence of green coloration of the skin, urine, plasma and other body fluids (ascites, breastmilk) or parts (sclerae) due to increased serum levels of biliverdin in association with biliary obstruction and/or liver failure. Association with malnutrition, medication, and congenital biliary atresia has also been reported.","definition_xrefs":["Orphanet:276405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"hyperbiliverdinemia","secondary_identifiers":["UMLS:C3279964","GARD:17279","MEDGEN:481594","OMIM:614156"],"synonyms":[{"name":"HBLVD","type":"related"},{"name":"green jaundice","type":"exact"},{"name":"hyperbiliverdinemia","type":"exact"}],"termid":"MONDO:0013595","xrefs":{"Monarch":{"xref_id":"0013595"}}}


id: PBO:0062046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 33","termid":"PBO:0062046"}


id: PBO:0075291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNX30 divergent transcript","termid":"PBO:0075291"}


id: PBO:0080724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WT1 associated protein","termid":"PBO:0080724"}


id: GO:0061103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized structural and/or functional features of a glomus cell of the carotid body. The carotid body is a specialized chemosensory organ that helps respond to hypoxia.","definition_xrefs":["PMID:6243386","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroendocrine cell differentiation","termid":"GO:0061101"},{"relation_name":"part_of","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carotid body glomus cell differentiation","termid":"GO:0061103"}


id: GO:0033544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A fatty acid beta-oxidation pathway by which fatty acids having cis-double bonds on even-numbered carbons are degraded. In this pathway, the intermediate 2,4-dienoyl-CoA is converted to cis-2-enoyl-CoA through one more cycle of the core beta-oxidation pathway. Cis-2-enoyl-CoA cannot be completely degraded via the core beta-oxidation pathway because hydratation of cis-2-enoyl-CoA yields D-3-hydroxyacyl-CoA, which is not a substrate for 3-hydroxylacyl-CoA dehydrogenase. Cis-2-enoyl-CoA must enter the so-called epimerase pathway, which involves converting D-3-hydroxyacyl-CoA to L-3-hydroxyacyl-CoA by 3-hydroxylacyl-CoA epimerase or by two stereo-specific enoyl-CoA hydratases. L-3-hydroxyacyl-CoA then returns to the core beta-oxidation pathway. Fatty acid beta-oxidation begins with the addition of coenzyme A to a fatty acid, and ends when only two or three carbons remain (as acetyl-CoA or propionyl-CoA respectively).","definition_xrefs":["GOC:mah","MetaCyc:PWY-5138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid beta-oxidation, unsaturated, even number","termid":"GO:0033542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"fatty acid beta-oxidation, unsaturated, even number, epimerase pathway","termid":"GO:0033544"}


id: GO:0035559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is passed from the epidermal growth factor receptor (EGFR) to components of the MAPKKK cascade, which become activated themselves to further propagate the signal and finally trigger a change in the function or state of the cell.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPKKK cascade involved in epidermal growth factor receptor signaling (obsolete GO:0035559)","synonyms":[{"name":"MAPKKK cascade involved in epidermal growth factor receptor signaling","type":"exact"},{"name":"MAPKKK cascade involved in epidermal growth factor receptor signalling","type":"exact"},{"name":"MAPKKK cascade involved in signaling from the EGFR","type":"exact"}],"termid":"GO:0035559"}


id: PBO:0088033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-binding endonuclease involved in mRNA decay; recruited to stalled ribosomes to promote breakdown of transcript body of nuclear-transcribed mRNA with stalls in translation elongation; cleaves mRNA within A site of colliding ribosome; has two CUE domains that bind ubiquitin, which may facilitate intramolecular monoubiquitination","termid":"PBO:0088033"}


id: FYPO:0007521
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-3":{"allele_type":"other","description":"Pmk1 from S. pombe","gene_uniquename":"SJAG_04551","name":"Pmk1Sp","uniquename":"SJAG_04551:allele-3"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121105,121120,121126,121131,121134],"is_not":false,"summary":null,"term":"FYPO:0007521"}]},"cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of tacrolimus and magnesium chloride than normal.","definition_xrefs":["PomBase:mah","PMID:19625445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_04551":null},"genotype_count":5,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(Pmk1 from S. pombe)","display_uniquename":"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-3","expression":"Not assayed or wild type"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"pmk1delta":{"display_name":"pmk1delta","display_uniquename":"pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0002682","FYPO:0000003"],"is_obsolete":false,"name":"resistance to tacrolimus and magnesium chloride","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_00610","SJAG_04551"],"single_locus_genotype_uniquenames":["Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","pck2delta","pmk1delta"],"synonyms":[{"name":"hypersensitive to tacrolimus and magnesium chloride","type":"exact"},{"name":"resistance to FK506 and magnesium chloride","type":"exact"},{"name":"resistance to magnesium chloride and FK506","type":"exact"},{"name":"resistance to magnesium chloride and tacrolimus","type":"exact"},{"name":"resistance to tacrolimus and MgCl2","type":"exact"},{"name":"resistance to tacrolimus and magnesium chloride during mitotic cell cycle","type":"related"},{"name":"resistance to tacrolimus and magnesium chloride during vegetative growth","type":"exact"},{"name":"resistant to tacrolimus and magnesium chloride","type":"exact"},{"name":"viable in the presence of FK506 and chloride","type":"exact"},{"name":"vic","type":"related"}],"termid":"FYPO:0007521","terms_by_termid":{"FYPO:0007521":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0009261
data:
  {"annotated_genes":["SJAG_04495","SJAG_04870","SJAG_00027","SJAG_00839","SJAG_04334","SJAG_06622","SJAG_03828","SJAG_02796","SJAG_02481","SJAG_03660","SJAG_03373","SJAG_02945","SJAG_05314","SJAG_00461","SJAG_06621","SJAG_04192","SJAG_02107","SJAG_00605","SJAG_04048","SJAG_02009","SJAG_01310","SJAG_02135","SJAG_03903","SJAG_03676","SJAG_02369","SJAG_02785","SJAG_00685"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901911"},{"annotations":[118237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006198"},{"annotations":[99806,105202,107651,100077,96338,111239,107650,111237,79584,111235,107282,105459,111236,111238,111240,111241,118208,107280,74174,107281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[90422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[74826,77883],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[71755],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"},{"annotations":[78196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a ribonucleotide, a compound consisting of ribonucleoside (a base linked to a ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide catabolic process","termid":"GO:0009166"},{"relation_name":"is_a","term_name":"ribonucleotide metabolic process","termid":"GO:0009259"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02481":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03676":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04870":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ribonucleotide catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ribonucleotide breakdown","type":"exact"},{"name":"ribonucleotide catabolism","type":"exact"},{"name":"ribonucleotide degradation","type":"exact"}],"termid":"GO:0009261","terms_by_termid":{"GO:0006110":null,"GO:0006198":null,"GO:0006256":null,"GO:0045820":null,"GO:0061613":null,"GO:0061621":null,"GO:1901911":null}}


id: PBO:0085478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Probable membrane protein with three predicted transmembrane domains; similar to C. elegans F55A11.5 and maize 1-acyl-glycerol-3-phosphate acyltransferase; YDR018C has a paralog, CST26, that arose from the whole genome duplication","termid":"PBO:0085478"}


id: MONDO:0017830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe Canavan disease (CD) is a rapidly progressing neurodegenerative disorder characterized by leukodystrophy with macrocephaly, severe developmental delay and hypotonia.","definition_xrefs":["Orphanet:314911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Canavan disease","termid":"MONDO:0010079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005559"],"is_obsolete":false,"name":"severe Canavan disease","secondary_identifiers":["UMLS:C5575558","MEDGEN:1826002","GARD:17437"],"synonyms":[{"name":"infantile Canavan disease","type":"exact"},{"name":"neonatal Canavan disease","type":"exact"}],"termid":"MONDO:0017830","xrefs":{"Monarch":{"xref_id":"0017830"}}}


id: MONDO:0003303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing encapsulated neoplasm arising from nerves in the gallbladder. Morphologically, it is characterized by the presence of fibroblasts and Schwann cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gallbladder cancer","termid":"MONDO:0005411"},{"relation_name":"is_a","term_name":"neurofibroma","termid":"MONDO:0016755"},{"relation_name":"is_a","term_name":"peripheral nervous system cancer","termid":"MONDO:0021089"},{"relation_name":"is_a","term_name":"malignant glioma","termid":"MONDO:0100342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"neurofibroma of gallbladder","secondary_identifiers":["NCIT:C5746","UMLS:C1333751","MEDGEN:232540","DOID:5150"],"synonyms":[{"name":"gall bladder neurofibroma","type":"exact"},{"name":"gallbladder neurofibroma","type":"exact"},{"name":"neurofibroma of gall bladder","type":"exact"},{"name":"neurofibroma of gallbladder","type":"exact"},{"name":"neurofibroma of the gallbladder","type":"exact"}],"termid":"MONDO:0003303","xrefs":{"Monarch":{"xref_id":"0003303"}}}


id: PBO:0088911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane anchored protein, claudin family, predicted membrane sensor, Tea1-interacting protein implicated in exocytosis","termid":"PBO:0088911"}


id: GO:0044706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A multicellular organism process which involves another multicellular organism of the same or different species.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multi-multicellular organism process","termid":"GO:0044706"}


id: GO:0001172
data:
  {"annotated_genes":["SJAG_01313","SJAG_01436","SJAG_02070","SJAG_00119","SJAG_02101","SJAG_04894","SJAG_00458","SJAG_03356","SJAG_04030"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58200,58780,59879,60900,63331,64314,64580,64801,69483],"is_not":false,"summary":null,"term":"GO:0001172"}]},"cv_name":"biological_process","definition":"The synthesis of an RNA transcript from an RNA template.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA biosynthetic process","termid":"GO:0032774"},{"relation_name":"part_of","term_name":"gene expression","termid":"GO:0010467"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00119":null,"SJAG_00458":null,"SJAG_01313":null,"SJAG_01436":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_03356":null,"SJAG_04030":null,"SJAG_04894":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"RNA-templated transcription","references_by_uniquename":{"GO_REF:0000108":null},"synonyms":[{"name":"transcription, RNA-dependent","type":"exact"},{"name":"transcription, RNA-templated","type":"exact"}],"termid":"GO:0001172","terms_by_termid":{"GO:0001172":null}}


id: GO:0141190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway that starts with an opsin molecule being activated by a photon. Opsins include rhodopsin and others visual receptors bind heterotrimeric transducin G proteins upon activation. Activated transducin alpha-subunit activates cGMP phosphodiesterase, which breaks down cGMP. The decrease in cGMP concentration leads to closure of cGMP-gated (CNG) channels, blockage of Na+ influx, and hyperpolarization of photoreceptor plasma membrane, leading to transmission of signal through synapses. The signal is terminated by phosphorylation of the C-terminal tail of rhodopsin by rhodopsin kinase to allow arrestin to bind and block G protein binding. Typical examples are rhabdomeric photoreceptors in the eyes of deuterostomes.","definition_xrefs":["PMID:19720651","PMID:36499010","PMID:36272560","PMID:37159291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled opsin signaling pathway","termid":"GO:0016056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"transducin-mediated opsin signaling pathway","synonyms":[{"name":"Gt-mediated opsin signaling pathway","type":"exact"},{"name":"cGMP-mediated opsin signaling pathway","type":"exact"},{"name":"cGMP-mediated rhodopsin signaling pathway","type":"narrow"},{"name":"ciliary opsin-mediated signaling pathway","type":"exact"},{"name":"cyclic-GMP-mediated opsin signaling pathway","type":"exact"},{"name":"cyclic-nucleotide-mediated opsin signaling pathway","type":"exact"}],"termid":"GO:0141190"}


id: PBO:0056195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member A6","termid":"PBO:0056195"}


id: PBO:0041323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2orf74 antisense RNA 1","termid":"PBO:0041323"}


id: FYPO:0005306
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to centromeric chromatin is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during vegetative growth","termid":"FYPO:0000449"},{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to centromeric chromatin during vegetative growth","synonyms":[{"name":"abnormal protein localisation to centromeric chromatin during vegetative growth","type":"exact"},{"name":"abnormal protein localization to centromeric chromatin during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to chromatin at centromere","type":"exact"}],"termid":"FYPO:0005306"}


id: PBO:0057244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 449a","termid":"PBO:0057244"}


id: SOFP:cyto_range
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"The cytological range covered by a feature. May be auto-generated from sequence coordinates, or determined by experimental methods","definition_xrefs":["so:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyto_range","termid":"SOFP:cyto_range"}


id: PBO:0051559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 11","termid":"PBO:0051559"}


id: PBO:0073830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 7 member 6 opposite strand","termid":"PBO:0073830"}


id: MONDO:0006322
data:
  {"annotated_genes":["SJAG_03363"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010939"}]},"cv_name":"mondo","definition":"A non-neoplastic disorder that affects the intrahepatic or extrahepatic bile ducts. Representative examples include cholangitis and biliary atresia.","definition_xrefs":["NCIT:C35774"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile duct disorder","termid":"MONDO:0002887"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03363":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"non-neoplastic bile duct disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3275160","MEDGEN:476793","EFO:1000400"],"synonyms":[{"name":"non-neoplastic bile duct disorder","type":"exact"}],"termid":"MONDO:0006322","terms_by_termid":{"MONDO:0010939":null},"xrefs":{"Monarch":{"xref_id":"0006322"}}}


id: PBO:0085204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Outer membrane component of the mitochondrial fusion machinery; binds to Fzo1p and Mgm1p to link these two GTPases during mitochondrial fusion; involved in fusion of both the outer and inner membranes; facilitates dimerization of Fzo1p during fusion; import into the outer membrane is mediated by Tom70p and Mim1p; has similarity to carrier proteins but likely not a transporter; similar to human SLC25A46 implicated in optic atroprophy spectrum disorder and Leigh syndrome","termid":"PBO:0085204"}


id: GO:0061863
data:
  {"annotated_genes":["SJAG_03540","SJAG_02624"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78655,81187],"is_not":false,"summary":null,"term":"GO:0061863"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of tubulin dimers to the plus end of a microtubule. The reaction is reversible depending on the availability of dimers.","definition_xrefs":["PMID:27872152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity","termid":"GO:0016740"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02624":null,"SJAG_03540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"microtubule plus end polymerase","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0061863","terms_by_termid":{"GO:0061863":null}}


id: PBO:0041726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin dependent protein kinase II beta","termid":"PBO:0041726"}


id: PBO:0006202
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-gene_product_or_complex","termid":"PBO:0006202"}


id: PBO:0001411
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein NES","termid":"PBO:0001411"}


id: SO:0000719
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An ordered and oriented set of scaffolds based on somewhat weaker sets of inferential evidence such as one set of mate pair reads together with supporting evidence from ESTs or location of markers from SNP or microsatellite maps, or cytogenetic localization of contained markers.","definition_xrefs":["FB:WG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial_genomic_sequence_assembly","termid":"SO:0001876"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ultracontig","synonyms":[{"name":"pseudochromosome","type":"exact"},{"name":"superscaffold","type":"related"}],"termid":"SO:0000719"}


id: PBO:0082662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the cleavage and polyadenylation factor I (CF I); CF 1, composed of the CF 1A complex (Rna14p, Rna15p, Clp1p, Pcf11p) and Hrp1, is involved in cleavage and polyadenylation of mRNA 3' ends; interacts with the A-rich polyadenylation signal in complex with Rna14p and Hrp1p; mutant displays reduced transcription elongation in the G-less-based run-on (GLRO) assay; required for gene looping and maintenance of genome stability","termid":"PBO:0082662"}


id: PBO:0064942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protease associated domain containing 1","termid":"PBO:0064942"}


id: GO:0015328
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of cystine from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete cystine secondary active transmembrane transporter activity (obsolete GO:0015328)","synonyms":[{"name":"cystine porter activity","type":"related"},{"name":"cystinosin","type":"narrow"},{"name":"lysosomal cystine transporter","type":"narrow"}],"termid":"GO:0015328"}


id: GO:0017081
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of a chloride channel.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ion channel regulator activity","termid":"GO:0099106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0098772"],"is_obsolete":false,"name":"chloride channel regulator activity","secondary_identifiers":["Reactome:R-HSA-383190"],"termid":"GO:0017081"}


id: SO:0001719
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification, whereby the 23rd residue (a lysine), from the start of the H3 histone protein is acetylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_3_acetylation_site","termid":"SO:0001973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K23_acetylation_site","synonyms":[{"name":"H3K23 acetylation site","type":"exact"},{"name":"H3K23ac","type":"exact"}],"termid":"SO:0001719"}


id: PBO:0081910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 877, pseudogene","termid":"PBO:0081910"}


id: GO:1903663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-altrarate.","definition_xrefs":["GOC:TermGenie","PMID:17649980","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate catabolic process","termid":"GO:0016052"},{"relation_name":"is_a","term_name":"aldaric acid catabolic process","termid":"GO:0019579"},{"relation_name":"is_a","term_name":"L-altrarate metabolic process","termid":"GO:1903662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"L-altrarate catabolic process","synonyms":[{"name":"L-altrarate(1-) breakdown","type":"exact"},{"name":"L-altrarate(1-) catabolism","type":"exact"},{"name":"L-altrarate(1-) degradation","type":"exact"}],"termid":"GO:1903663"}


id: PBO:0039091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine--glyoxylate aminotransferase 2","termid":"PBO:0039091"}


id: PBO:0081784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF710 antisense RNA 1","termid":"PBO:0081784"}


id: MONDO:0016648
data:
  {"annotated_genes":["SJAG_02463","SJAG_01941"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87534,87535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009189"}]},"cv_name":"mondo","definition":"Multiple epiphyseal dysplasias (MED/EDMs) are characterized by epiphyseal anomalies causing joint pain early in life, recurrent osteochondritis and early arthrosis. The EDMs are a heterogeneous group of diseases with variable expression classed as MED/EDMs 1-6.","definition_xrefs":["Orphanet:251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01941":null,"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"multiple epiphyseal dysplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:10756","ICD9:756.56","MEDGEN:6461","ICD10CM:Q77.3","DOID:12721","SCTID:59708000","HP:0002654","icd11.foundation:2009123831","MedDRA:10028197","NORD:1468","OMIMPS:132400","UMLS:C0026760"],"synonyms":[{"name":"Dominant Multiple Epiphyseal Dysplasia","type":"exact"},{"name":"EDM","type":"exact"},{"name":"MED","type":"exact"},{"name":"Polyepiphyseal dysplasia","type":"exact"},{"name":"epiphyseal dysplasia, multiple","type":"related"},{"name":"multiple epiphyseal dysplasia","type":"exact"},{"name":"multiple epiphyseal dysplasia (disease)","type":"exact"},{"name":"polyepiphyseal dysplasia","type":"exact"}],"termid":"MONDO:0016648","terms_by_termid":{"MONDO:0009189":null},"xrefs":{"Monarch":{"xref_id":"0016648"}}}


id: CHEBI:16526
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbon dioxide","termid":"CHEBI:16526"}


id: MONDO:0008704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Short-limb skeletal dysplasia with severe combined immunodeficiency is an extremely rare type of SCID characterized by the classical signs of T-B- SCID (severe and recurrent infections, diarrhea, failure to thrive, absence of T and B lymphocytes), associated with skeletal anomalies like short stature, bowing of the long bones and metaphyseal abnormalities of variable degree of severity.","definition_xrefs":["Orphanet:935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-B- severe combined immunodeficiency","termid":"MONDO:0017855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"short-limb skeletal dysplasia with severe combined immunodeficiency","secondary_identifiers":["icd11.foundation:469016488","UMLS:C1860168","MESH:C565984","MEDGEN:348040","OMIM:200900","GARD:2988"],"synonyms":[{"name":"SLSD with SCID","type":"related"},{"name":"Slsd with SCID","type":"related"},{"name":"achondroplasia and Swiss type agammaglobulinemia","type":"related"},{"name":"achondroplasia and Swiss-type agammaglobulinemia","type":"related"},{"name":"achondroplasia and severe combined immunodeficiency","type":"related"},{"name":"achondroplasia so-called and severe combined immunodeficiency","type":"related"},{"name":"achondroplasia, so-called, and severe combined immunodeficiency","type":"related"},{"name":"achondroplasia-SCID syndrome","type":"exact"},{"name":"achondroplasia-Swiss type agammaglobulinemia syndrome","type":"exact"},{"name":"achondroplasia-severe combined immunodeficiency syndrome","type":"exact"},{"name":"agammaglobulinemia and achondroplasia","type":"related"},{"name":"immunodeficiency-short limb dwarfism syndrome","type":"exact"},{"name":"short limb skeletal dysplasia with SCID","type":"exact"},{"name":"short-limb skeletal dysplasia with severe combined immunodeficiency","type":"exact"}],"termid":"MONDO:0008704","xrefs":{"Monarch":{"xref_id":"0008704"}}}


id: PBO:0109279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3114","termid":"PBO:0109279"}


id: PBO:0049714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 1 pseudogene 2","termid":"PBO:0049714"}


id: PBO:0113491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor; regulates multidrug resistance and the oxidative stress response; forms a heterodimer with Pdr1p; contains a Zn(II)2Cys6 zinc finger domain that interacts with a pleiotropic drug resistance element in vitro; negative regulator of autophagy, modulating the transcription of genes involved in NADPH production and the pentose phosphate pathway; Stb5p expression is reduced during nitrogen starvation and autophagy induction, while STB5 mRNA levels are significantly increased","termid":"PBO:0113491"}


id: GO:0002134
data:
  {"annotated_genes":["SJAG_03453","SJAG_02370"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92670,93495],"is_not":false,"summary":null,"term":"GO:0002134"}]},"cv_name":"molecular_function","definition":"Binding to UTP, uridine 5'-triphosphate.","definition_xrefs":["GOC:hjd","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide binding","termid":"GO:0032557"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02370":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"UTP binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0002134","terms_by_termid":{"GO:0002134":null}}


id: GO:0180012
data:
  {"annotated_genes":["SJAG_04022","SJAG_02037","SJAG_00527","SJAG_03500","SJAG_02720","SJAG_03853","SJAG_02865","SJAG_03226","SJAG_00435","SJAG_01175","SJAG_03594","SJAG_03624","SJAG_01791","SJAG_01412","SJAG_02551","SJAG_01713","SJAG_02668","SJAG_01599","SJAG_03126","SJAG_04942","SJAG_00961","SJAG_03233","SJAG_04587"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180034"},{"annotations":[111664,115430,113152,92434,69220,94636,102120,113812,100903,95254,98994,95275,99949,94747,106527,106566,117154,90203,120089,106820,89452,113425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180010"}]},"cv_name":"biological_process","definition":"Any process involved in transcription termination-coupled 3' processing of RNA polymerase II RNA transcripts by 3' end cleavage and addition of a poly(A) tail.","definition_xrefs":["PMID:31499460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA 3'-end processing","termid":"GO:0031123"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00435":null,"SJAG_00527":null,"SJAG_00961":null,"SJAG_01175":null,"SJAG_01412":null,"SJAG_01599":null,"SJAG_01713":null,"SJAG_01791":null,"SJAG_02037":null,"SJAG_02551":null,"SJAG_02668":null,"SJAG_02720":null,"SJAG_02865":null,"SJAG_03126":null,"SJAG_03226":null,"SJAG_03233":null,"SJAG_03500":null,"SJAG_03594":null,"SJAG_03624":null,"SJAG_03853":null,"SJAG_04022":null,"SJAG_04587":null,"SJAG_04942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"co-transcriptional RNA 3'-end processing, cleavage and polyadenylation pathway","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"cotranscriptional 3'-end processing of RNA polymerase II transcripts","type":"exact"}],"termid":"GO:0180012","terms_by_termid":{"GO:0180010":null,"GO:0180034":null}}


id: PBO:0056355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 9","termid":"PBO:0056355"}


id: GO:0070207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a protein homotrimer, a macromolecular structure consisting of three noncovalently associated identical subunits.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein homooligomerization","termid":"GO:0051260"},{"relation_name":"is_a","term_name":"protein trimerization","termid":"GO:0070206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"protein homotrimerization","synonyms":[{"name":"protein homotrimer assembly","type":"exact"},{"name":"protein homotrimer biosynthesis","type":"exact"},{"name":"protein homotrimer biosynthetic process","type":"exact"},{"name":"protein homotrimer formation","type":"exact"}],"termid":"GO:0070207"}


id: MONDO:0002727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the olfactory nerve.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"glossopharyngeal nerve disorder","termid":"MONDO:0002639"},{"relation_name":"is_a","term_name":"cranial nerve neuropathy","termid":"MONDO:0003569"},{"relation_name":"is_a","term_name":"peripheral nervous system disorder","termid":"MONDO:0003620"},{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory nerve disorder","secondary_identifiers":["ICD9:352.0","MEDGEN:155962","SCTID:68982002","MESH:D020431","NCIT:C27210","DOID:367","UMLS:C0751937"],"synonyms":[{"name":"disease of olfactory nerve","type":"exact"},{"name":"disease or disorder of olfactory nerve","type":"exact"},{"name":"disorder of 1st nerve","type":"exact"},{"name":"disorder of olfactory [1st] nerve","type":"exact"},{"name":"disorder of olfactory nerve","type":"exact"},{"name":"disorder of the 1st nerve","type":"exact"},{"name":"olfactory nerve disease","type":"exact"},{"name":"olfactory nerve disease or disorder","type":"exact"},{"name":"olfactory nerve disorder","type":"exact"}],"termid":"MONDO:0002727","xrefs":{"Monarch":{"xref_id":"0002727"}}}


id: GO:0002326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a lymphoid progenitor cell becomes committed to become any type of B cell.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"B cell differentiation","termid":"GO:0030183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell lineage commitment","synonyms":[{"name":"B lymphocyte lineage commitment","type":"exact"},{"name":"B-cell lineage commitment","type":"exact"},{"name":"B-lymphocyte lineage commitment","type":"exact"}],"termid":"GO:0002326"}


id: GO:0033238
data:
  {"annotated_genes":["SJAG_04546"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0170066"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways by which individual cells transform amines.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"amine metabolic process","termid":"GO:0009308"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of amine metabolism","type":"exact"},{"name":"regulation of cellular amine metabolic process","type":"exact"}],"termid":"GO:0033238","terms_by_termid":{"GO:0170066":null}}


id: PR:P50521
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hxk2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P50521"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexokinase-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F8.07c","synonyms":[{"name":"Spom972h-hxk2","type":"exact"}],"termid":"PR:P50521"}


id: GO:0005957
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete debranching enzyme (obsolete GO:0005957)","synonyms":[{"name":"debranching enzyme","type":"exact"}],"termid":"GO:0005957"}


id: GO:0042929
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of a ferrichrome from one side of a membrane to the other. Ferrichromes are any of a group of growth-promoting Fe(III) chelates formed by various genera of microfungi. They are homodetic cyclic hexapeptides made up of a tripeptide of glycine (or other small neutral amino acids) and a tripeptide of an N'acyl-N4-hydroxy-L-ornithine.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore-iron transmembrane transporter activity","termid":"GO:0015343"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ferrichrome transmembrane transporter activity","synonyms":[{"name":"ferrichrome transporter activity","type":"related"}],"termid":"GO:0042929"}


id: PBO:0045055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in lymphocytic leukemia 2 like","termid":"PBO:0045055"}


id: PBO:0027965
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_dimethylation_at_telomere","termid":"PBO:0027965"}


id: GO:0007229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to an integrin on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"integrin-mediated signaling pathway","synonyms":[{"name":"integrin-mediated signalling pathway","type":"exact"}],"termid":"GO:0007229"}


id: PBO:0072632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine and serine rich coiled-coil 2","termid":"PBO:0072632"}


id: PBO:0083665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic reticulum membrane protein; required for mannosylation of inositolphosphorylceramide and for growth at high calcium concentrations; protein abundance increases in response to DNA replication stress","termid":"PBO:0083665"}


id: PBO:0076732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-complex 1 pseudogene 1","termid":"PBO:0076732"}


id: PATO:0001900
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A directional quality inhering in a bearer by virtue of the bearer's direction that is similar to the direction of an object to the south when it faces north.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"direction","termid":"PATO:0000039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"front","termid":"PATO:0001900"}


id: PR:O74346
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- map4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P cell-type agglutination protein map4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21D10.06c","synonyms":[{"name":"Spom972h-map4","type":"exact"}],"termid":"PR:O74346"}


id: MONDO:0002842
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gastritis resulting from bacteria.","definition_xrefs":["NCIT:C27340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastritis","termid":"MONDO:0004966"},{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"},{"relation_name":"is_a","term_name":"digestive system infectious disorder","termid":"MONDO:0043424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"bacterial gastritis","secondary_identifiers":["MEDGEN:182680","SCTID:723096000","UMLS:C0948039","DOID:4033"],"synonyms":[{"name":"Bacteria caused gastritis (disease)","type":"exact"},{"name":"Bacteria gastritis (disease)","type":"exact"},{"name":"bacterial gastritis","type":"exact"}],"termid":"MONDO:0002842","xrefs":{"Monarch":{"xref_id":"0002842"}}}


id: FYPO:0000742
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to actin cortical patches is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex during vegetative growth","termid":"FYPO:0000928"},{"relation_name":"is_a","term_name":"abnormal protein localization to actin cytoskeleton during vegetative growth","termid":"FYPO:0007578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to actin cortical patch","synonyms":[{"name":"abnormal protein localisation to actin cortical patch","type":"exact"},{"name":"abnormal protein localization to F-actin patch","type":"exact"},{"name":"abnormal protein localization to actin cortical patch during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to actin cortical patch during vegetative growth","type":"exact"},{"name":"abnormal protein localization to actin patch","type":"exact"}],"termid":"FYPO:0000742"}


id: MONDO:0014356
data:
  {"annotated_genes":["SJAG_04560"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88207],"is_not":false,"summary":null,"term":"MONDO:0014356"}]},"cv_name":"mondo","definition":"Any mitochondrial complex III deficiency in which the cause of the disease is a mutation in the UQCC2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex III deficiency, nuclear type","termid":"MONDO:0020811"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex III deficiency nuclear type 7","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080116","OMIM:615824","GARD:16015","MEDGEN:862845","UMLS:C4014408"],"synonyms":[{"name":"MC3DN7","type":"related"},{"name":"UQCC2 mitochondrial complex III deficiency","type":"exact"},{"name":"mitochondrial Complex 3 deficiency, nuclear type 7","type":"related"},{"name":"mitochondrial complex III deficiency caused by mutation in UQCC2","type":"exact"},{"name":"mitochondrial complex III deficiency, nuclear type 7","type":"related"}],"termid":"MONDO:0014356","terms_by_termid":{"MONDO:0014356":null},"xrefs":{"Monarch":{"xref_id":"0014356"}}}


id: PBO:0070224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 157 pseudogene","termid":"PBO:0070224"}


id: PBO:0059526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded 12S rRNA","termid":"PBO:0059526"}


id: GO:0072414
data:
  {"annotated_genes":["SJAG_04140","SJAG_01805","SJAG_04332","SJAG_00082","SJAG_01837","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91815,104202,113054,118539,95618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[104212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990820"},{"annotations":[104213,96359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072435"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of mitotic cell cycle checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cell cycle checkpoint signaling","termid":"GO:0072396"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mitotic cell cycle checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072455","GO:0072473"],"synonyms":[{"name":"mitotic G2/M transition checkpoint effector process","type":"related"},{"name":"mitotic cell cycle G1/S checkpoint effector process","type":"related"},{"name":"mitotic cell cycle checkpoint effector process","type":"exact"},{"name":"response to mitotic G2/M transition checkpoint signal","type":"related"},{"name":"response to mitotic cell cycle G1/S checkpoint signaling","type":"related"},{"name":"response to signal involved in mitotic G2/M transition checkpoint","type":"related"},{"name":"response to signal involved in mitotic cell cycle G1/S checkpoint","type":"related"},{"name":"response to signal involved in mitotic cell cycle checkpoint","type":"related"}],"termid":"GO:0072414","terms_by_termid":{"GO:0072435":null,"GO:0140429":null,"GO:1990820":null}}


id: GO:0003108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process which decreases the force of heart muscle contraction mediated by chemical signaling, hormonal, autocrine or paracrine.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of the force of heart contraction by chemical signal","termid":"GO:0003057"},{"relation_name":"is_a","term_name":"negative regulation of heart contraction","termid":"GO:0045822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of the force of heart contraction by chemical signal","synonyms":[{"name":"negative regulation of the force of heart muscle contraction by chemical signal","type":"related"}],"termid":"GO:0003108"}


id: GO:0031567
data:
  {"annotated_genes":["SJAG_03681","SJAG_03048","SJAG_01210","SJAG_03602","SJAG_04280","SJAG_01401","SJAG_00071","SJAG_04332","SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117762,104179,110731,103438,90756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031568"},{"annotations":[96353,117865,100240,97665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031569"}]},"cv_name":"biological_process","definition":"A signal transduction process that contributes to a cell size control checkpoint during mitosis.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle checkpoint signaling","termid":"GO:0007093"},{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle phase transition","termid":"GO:1901991"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_01210":null,"SJAG_01401":null,"SJAG_02392":null,"SJAG_03048":null,"SJAG_03602":null,"SJAG_03681":null,"SJAG_04280":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0044772"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0044772","GO:0023052"],"is_obsolete":false,"name":"mitotic cell size control checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072471"],"synonyms":[{"name":"mitotic cell cycle cell size control checkpoint","type":"related"},{"name":"mitotic cell size control checkpoint","type":"related"},{"name":"signal transduction involved in cell size control checkpoint","type":"related"}],"termid":"GO:0031567","terms_by_termid":{"GO:0031568":null,"GO:0031569":null}}


id: MONDO:0006006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated squamous cell carcinoma characterized by a papillary growth pattern, acanthosis, mild cytologic atypia, and pushing tumor margins. The most commonly affected anatomic sites are the oral cavity, nasal cavity, larynx, esophagus, anus, vagina, vulva, and the plantar region of the foot.","definition_xrefs":["NCIT:C3781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papillary squamous carcinoma","termid":"MONDO:0002979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"verrucous carcinoma","secondary_identifiers":["MEDGEN:60213","ICDO:8051/3","ICD9:199.1","EFO:0007535","DOID:3737","SCTID:403904009","MESH:D018289","UMLS:C0206706"],"synonyms":[{"name":"verrucous carcinoma","type":"exact"},{"name":"verrucous carcinoma NOS (morphologic abnormality)","type":"exact"},{"name":"verrucous epidermoid carcinoma","type":"exact"},{"name":"verrucous epidermoid cell carcinoma","type":"exact"},{"name":"verrucous squamous carcinoma","type":"exact"},{"name":"verrucous squamous cell carcinoma","type":"exact"},{"name":"warty carcinoma","type":"related"}],"termid":"MONDO:0006006","xrefs":{"Monarch":{"xref_id":"0006006"}}}


id: PR:Q10183
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- faf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3F10.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3F10.08c","synonyms":[{"name":"Spom972h-faf1","type":"exact"}],"termid":"PR:Q10183"}


id: PBO:0085220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Palmitoyltransferase with autoacylation activity; likely functions in pathway(s) outside Ras; member of a family of putative palmitoyltransferases containing an Asp-His-His-Cys-cysteine rich (DHHC-CRD) domain","termid":"PBO:0085220"}


id: PBO:0085846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; phosphorylated in response to alpha factor; protein abundance increases in response to DNA replication stress","termid":"PBO:0085846"}


id: PBO:0058091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR4307 host gene","termid":"PBO:0058091"}


id: GO:0030811
data:
  {"annotated_genes":["SJAG_05314","SJAG_02785","SJAG_00685"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74826,77883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"},{"annotations":[71755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006110"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of nucleotides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleotide metabolic process","termid":"GO:0006140"},{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"regulates","term_name":"nucleotide catabolic process","termid":"GO:0009166"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_02785":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of nucleotide catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"regulation of nucleotide breakdown","type":"exact"},{"name":"regulation of nucleotide catabolism","type":"exact"},{"name":"regulation of nucleotide degradation","type":"exact"}],"termid":"GO:0030811","terms_by_termid":{"GO:0006110":null,"GO:0045820":null}}


id: PBO:0066291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member S, pseudogene","termid":"PBO:0066291"}


id: GO:0009132
data:
  {"annotated_genes":["SJAG_02247","SJAG_04192","SJAG_03828","SJAG_06621","SJAG_02107","SJAG_01310","SJAG_02135","SJAG_05314","SJAG_00605","SJAG_00779","SJAG_03903","SJAG_03977","SJAG_00839","SJAG_00027","SJAG_02874","SJAG_02945","SJAG_04849","SJAG_03660","SJAG_02038","SJAG_01595","SJAG_00685","SJAG_04495","SJAG_04665","SJAG_04657","SJAG_04334","SJAG_06622","SJAG_00461","SJAG_02785","SJAG_03676","SJAG_02796","SJAG_02369","SJAG_03373","SJAG_02009","SJAG_00885","SJAG_04048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101663],"is_not":false,"summary":null,"term":"GO:0009132"},{"annotations":[73640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006172"},{"annotations":[96338,79584,111240,107282,111238,118208,111241,107651,111239,107281,74174,111235,100077,105202,111237,99806,111236,107650,107280,105459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[82169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[109088,94249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046704"},{"annotations":[109089,97304,94250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[72779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[72778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[65368],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046710"},{"annotations":[90422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[74826,77883],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[72254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009134"},{"annotations":[71755],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"},{"annotations":[115169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009191"},{"annotations":[82168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"},{"annotations":[78196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a nucleoside diphosphate, a compound consisting of a nucleobase linked to a deoxyribose or ribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside phosphate metabolic process","termid":"GO:0006753"}],"gene_count":35,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00685":null,"SJAG_00779":null,"SJAG_00839":null,"SJAG_00885":null,"SJAG_01310":null,"SJAG_01595":null,"SJAG_02009":null,"SJAG_02038":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02247":null,"SJAG_02369":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02874":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03676":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_03977":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04657":null,"SJAG_04665":null,"SJAG_04849":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"nucleoside diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"nucleoside diphosphate metabolism","type":"exact"}],"termid":"GO:0009132","terms_by_termid":{"GO:0006110":null,"GO:0006172":null,"GO:0006225":null,"GO:0006227":null,"GO:0006233":null,"GO:0006240":null,"GO:0006256":null,"GO:0009132":null,"GO:0009134":null,"GO:0009191":null,"GO:0045820":null,"GO:0046704":null,"GO:0046705":null,"GO:0046710":null,"GO:0061613":null,"GO:0061621":null}}


id: GO:0004779
data:
  {"annotated_genes":["SJAG_03475"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004781"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an adenylyl group from an adenosine nucleotide (ATP or ADP) to sulfate, forming adenylylsulfate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03475":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016779","GO:0003674"],"is_obsolete":false,"name":"sulfate adenylyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null},"synonyms":[{"name":"sulphate adenylyltransferase activity","type":"exact"}],"termid":"GO:0004779","terms_by_termid":{"GO:0004781":null}}


id: MONDO:0009287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glycogenosis due to glucose-6-phosphatase deficiency (G6P) type a, or glycogen storage disease (GSD) type 1a, is a type of glycogenosis due to G6P deficiency.","definition_xrefs":["Orphanet:79258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease I","termid":"MONDO:0002413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"glycogen storage disease due to glucose-6-phosphatase deficiency type IA","secondary_identifiers":["NANDO:2201153","OMIM:232200","MESH:C538655","MEDGEN:415885","UMLS:C2919796","DOID:2749","GARD:7864","SCTID:444707001"],"synonyms":[{"name":"G6P deficiency type 1a","type":"exact"},{"name":"G6PC glycogen storage disease","type":"exact"},{"name":"GSD Ia","type":"related"},{"name":"GSD due to G6P deficiency type 1a","type":"exact"},{"name":"GSD due to G6P deficiency type Ia","type":"exact"},{"name":"GSD type 1a","type":"exact"},{"name":"GSD1","type":"related"},{"name":"GSD1A","type":"related"},{"name":"GSDIa","type":"exact"},{"name":"Von Gierke disease","type":"related"},{"name":"glucose-6-phosphatase deficiency","type":"related"},{"name":"glucose-6-phosphatase deficiency glycogen storage disease","type":"related"},{"name":"glycogen storage disease 1","type":"related"},{"name":"glycogen storage disease 1A","type":"related"},{"name":"glycogen storage disease Ia","type":"related"},{"name":"glycogen storage disease caused by mutation in G6PC","type":"exact"},{"name":"glycogen storage disease due to G6P deficiency type Ia","type":"exact"},{"name":"glycogen storage disease type 1a","type":"exact"},{"name":"glycogen storage disease type Ia","type":"exact"},{"name":"glycogenosis due to glucose-6-phosphatase deficiency type 1a","type":"exact"},{"name":"glycogenosis due to glucose-6-phosphatase deficiency type Ia","type":"exact"},{"name":"glycogenosis type Ia","type":"exact"},{"name":"hepatorenal form of glycogen storage disease","type":"related"},{"name":"hepatorenal glycogenosis","type":"related"}],"termid":"MONDO:0009287","xrefs":{"Monarch":{"xref_id":"0009287"}}}


id: PBO:0058315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4688","termid":"PBO:0058315"}


id: PBO:0085602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in cellular response to oxidative stress; required for oxidation of specific cysteine residues of transcription factor Yap1p, resulting in nuclear localization of Yap1p in response to stress; YBP1 has a paralog, YBP2, that arose from the whole genome duplication","termid":"PBO:0085602"}


id: PBO:0036248
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana COQ4","termid":"PBO:0036248"}


id: MONDO:0007090
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amastia, bilateral, with ureteral triplication and dysmorphism","secondary_identifiers":["MEDGEN:354882","UMLS:C1863015","MESH:C566295","OMIM:104350"],"synonyms":[{"name":"amastia, bilateral, with ureteral triplication and dysmorphism","type":"exact"}],"termid":"MONDO:0007090","xrefs":{"Monarch":{"xref_id":"0007090"}}}


id: GO:0062043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that starts or increases the rate, frequency or extent of cardiac epithelial to mesenchymal transition, a transition where a cardiac epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.","definition_xrefs":["GOC:BHF","GOC:rph","PMID:20951801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial to mesenchymal transition","termid":"GO:0010718"},{"relation_name":"is_a","term_name":"regulation of cardiac epithelial to mesenchymal transition","termid":"GO:0062042"},{"relation_name":"positively_regulates","term_name":"cardiac epithelial to mesenchymal transition","termid":"GO:0060317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac epithelial to mesenchymal transition","termid":"GO:0062043"}


id: PBO:0012216
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-imports","termid":"PBO:0012216"}


id: PBO:0042420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 27 pseudogene 4","termid":"PBO:0042420"}


id: SO:0001616
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that causes a fusion of two polypeptide sequences.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_sequence_variant","termid":"SO:0001603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide_fusion","synonyms":[{"name":"polypeptide fusion","type":"exact"}],"termid":"SO:0001616"}


id: PBO:0040104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arsenite methyltransferase","termid":"PBO:0040104"}


id: MONDO:0017477
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lower limb hypertrophy is a rare, genetic, non-syndromic developmental defect during embryogenesis characterized by uni- or bilateral overgrowth of lower limbs involving bones and/or soft tissues and resulting in an abnormal increase in leg length and/or width. Hypertrophy presents either as a proportionate overgrowth of entire limb or involves only the proximal or distal parts of it. Phenotype ranges from mild hypertrophy without functional disability to massively hypertrophied limb with knee flexion and ankle equinus contractures and macrodystrophia lipomatosa. Patients may also present vascular abnormalities (e.g. cutaneous angiomas, varicose veins) and myalgia.","definition_xrefs":["Orphanet:295051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lower limb hypertrophy","secondary_identifiers":["icd11.foundation:601080430","GARD:21213"],"termid":"MONDO:0017477","xrefs":{"Monarch":{"xref_id":"0017477"}}}


id: GO:0004164
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-[(3S)-amino-3-carboxypropyl]-L-histidyl-[translation elongation factor 2] + 3 S-adenosyl-L-methionine = diphthine-[translation elongation factor 2] + 3 H+ + 3 S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:3042777","PMID:15485916","PMID:20873788","RHEA:36415"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methyltransferase activity","termid":"GO:0008276"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0008276","GO:0140096","GO:0016741","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"diphthine synthase activity","secondary_identifiers":["MetaCyc:RXN-14326","EC:2.1.1.98"],"synonyms":[{"name":"S-adenosyl-L-methionine:2-(3-carboxy-3-aminopropyl)-L-histidine methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:elongation factor 2 methyltransferase activity","type":"related"},{"name":"diphthine methyltransferase activity","type":"related"}],"termid":"GO:0004164"}


id: MONDO:0002758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A highly differentiated squamous cell carcinoma that arises from the vulva. It is characterized by the presence of a warty and hyperkeratinized surface, malignant cells with abundant eosinophilic cytoplasm, minimal cytologic atypia, and absence or rarity of mitotic figures. The tumor infiltrates the underlying stroma with a pushing border.","definition_xrefs":["NCIT:C6383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"verrucous carcinoma","termid":"MONDO:0006006"},{"relation_name":"is_a","term_name":"vulvar squamous cell carcinoma","termid":"MONDO:0024609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vulva verrucous carcinoma","secondary_identifiers":["DOID:3740","UMLS:C1336983","MEDGEN:234482"],"synonyms":[{"name":"mammalian vulva verrucous carcinoma","type":"exact"},{"name":"verrucous carcinoma of the vulva","type":"exact"},{"name":"verrucous carcinoma of vulva","type":"exact"},{"name":"vulvar verrucous carcinoma","type":"exact"}],"termid":"MONDO:0002758","xrefs":{"Monarch":{"xref_id":"0002758"}}}


id: MONDO:0400003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition that results from excessive fluoride ingestion leading to fluoride accumulation in the bone progressively over many years. The early symptoms of skeletal fluorosis, include stiffness and pain in the joints. In severe cases, the bone structure may change and ligaments may calcify, with resulting impairment of muscles and pain.","definition_xrefs":["PMID:3295994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"skeletal fluorosis","secondary_identifiers":["ICD10CM:M85.1","icd11.foundation:1269698463"],"synonyms":[{"name":"fluorosis of the skeleton","type":"exact"}],"termid":"MONDO:0400003","xrefs":{"Monarch":{"xref_id":"0400003"}}}


id: PBO:0052483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch domain containing 8B","termid":"PBO:0052483"}


id: GO:1902830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of spinal cord association neuron differentiation.","definition_xrefs":["GOC:TermGenie","PMID:21730158","GO_REF:0000058","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron differentiation","termid":"GO:0045665"},{"relation_name":"is_a","term_name":"regulation of spinal cord association neuron differentiation","termid":"GO:1902829"},{"relation_name":"negatively_regulates","term_name":"spinal cord association neuron differentiation","termid":"GO:0021527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of spinal cord association neuron differentiation","synonyms":[{"name":"down regulation of spinal cord association neuron differentiation","type":"exact"},{"name":"down regulation of spinal cord dorsal interneuron differentiation","type":"exact"},{"name":"down-regulation of spinal cord association neuron differentiation","type":"exact"},{"name":"down-regulation of spinal cord dorsal interneuron differentiation","type":"exact"},{"name":"downregulation of spinal cord association neuron differentiation","type":"exact"},{"name":"downregulation of spinal cord dorsal interneuron differentiation","type":"exact"},{"name":"inhibition of spinal cord association neuron differentiation","type":"narrow"},{"name":"inhibition of spinal cord dorsal interneuron differentiation","type":"narrow"},{"name":"negative regulation of spinal cord dorsal interneuron differentiation","type":"exact"}],"termid":"GO:1902830"}


id: PBO:0049691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacid oxidase 1","termid":"PBO:0049691"}


id: GO:0090508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phenylethylamine that contribute to synaptic transmission.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylethylamine biosynthetic process","termid":"GO:0042444"},{"relation_name":"is_a","term_name":"phenylethylamine metabolic process involved in synaptic transmission","termid":"GO:0090507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"phenylethylamine biosynthetic process involved in synaptic transmission","termid":"GO:0090508"}


id: GO:0070232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of T cell death by apoptotic process.","definition_xrefs":["GOC:add","ISBN:0781765196","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte apoptotic process","termid":"GO:0070228"},{"relation_name":"regulates","term_name":"T cell apoptotic process","termid":"GO:0070231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell apoptotic process","synonyms":[{"name":"regulation of T cell apoptosis","type":"narrow"},{"name":"regulation of T lymphocyte apoptosis","type":"exact"},{"name":"regulation of T-cell apoptosis","type":"exact"},{"name":"regulation of T-lymphocyte apoptosis","type":"exact"},{"name":"regulation of programmed cell death of T cells by apoptosis","type":"exact"}],"termid":"GO:0070232"}


id: PATO:0025001
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer not being suitable for use as a safe means of hydration.","definition_xrefs":["Wikipedia:https://en.wikipedia.org/wiki/Drinking_water"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potability","termid":"PATO:0025000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-potable","synonyms":[{"name":"undrinkable","type":"exact"}],"termid":"PATO:0025001"}


id: PBO:0081850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 783","termid":"PBO:0081850"}


id: PR:O60184
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssn6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcriptional corepressor ssn6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23E6.09","synonyms":[{"name":"Spom972h-ssn6","type":"exact"}],"termid":"PR:O60184"}


id: GO:0005923
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An occluding cell-cell junction that is composed of a branching network of sealing strands that completely encircles the apical end of each cell in an epithelial sheet; the outer leaflets of the two interacting plasma membranes are seen to be tightly apposed where sealing strands are present. Each sealing strand is composed of a long row of transmembrane adhesion proteins embedded in each of the two interacting plasma membranes.","definition_xrefs":["ISBN:0815332181","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tight junction","termid":"GO:0070160"},{"relation_name":"part_of","term_name":"apical junction complex","termid":"GO:0043296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bicellular tight junction","secondary_identifiers":["NIF_Subcellular:sao1939999134","Wikipedia:Tight_junction"],"synonyms":[{"name":"zonula occludens","type":"exact"}],"termid":"GO:0005923"}


id: PBO:0062549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily N member 1 pseudogene","termid":"PBO:0062549"}


id: GO:0000114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that regulates transcription such that the target genes are transcribed as part of the G1 phase of the mitotic cell cycle.","definition_xrefs":["GOC:dph","GOC:mah","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription involved in G1 phase of mitotic cell cycle (obsolete GO:0000114)","synonyms":[{"name":"G1-specific transcription in mitotic cell cycle","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter during G1 phase of cell cycle","type":"exact"},{"name":"regulation of transcription involved in G1 phase of mitotic cell cycle","type":"exact"}],"termid":"GO:0000114"}


id: PBO:0088380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxylate reductase","termid":"PBO:0088380"}


id: PBO:0017786
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aminoacyl tRNA Synthetase Cofactor","termid":"PBO:0017786"}


id: PBO:0114664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMP-dependent synthetase/ligase domain/Fatty acyl-coenzyme A reductase-like, NAD-binding domain, implicated in fatty acid metabolism, or amino acid metabolism","termid":"PBO:0114664"}


id: GO:1900168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glial cell-derived neurotrophic factor production.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of glial cell-derived neurotrophic factor production","termid":"GO:1900166"},{"relation_name":"positively_regulates","term_name":"glial cell-derived neurotrophic factor production","termid":"GO:0044467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of glial cell-derived neurotrophic factor production","synonyms":[{"name":"activation of glial cell line-derived neurotrophic factor secretion","type":"narrow"},{"name":"positive regulation of GDNF production","type":"exact"},{"name":"positive regulation of glial cell line-derived neurotrophic factor secretion","type":"related"},{"name":"positive regulation of glial cell-derived neurotrophic factor secretion","type":"narrow"}],"termid":"GO:1900168"}


id: GO:0008839
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate + NAD(P)+ + H2O = (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate + NAD(P)H + H+.","definition_xrefs":["EC:1.17.1.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-hydroxy-tetrahydrodipicolinate reductase","secondary_identifiers":["MetaCyc:RXN-14014"],"synonyms":[{"name":"2,3,4,5-tetrahydrodipicolinate:NAD(P)+ oxidoreductase activity","type":"related"},{"name":"dihydrodipicolinate reductase activity","type":"exact"},{"name":"dihydrodipicolinic acid reductase activity","type":"related"}],"termid":"GO:0008839"}


id: PBO:0064615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 5 homeobox 1 pseudogene 5","termid":"PBO:0064615"}


id: PBO:0050207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 24","termid":"PBO:0050207"}


id: MONDO:0008389
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant Robinow syndrome (DRS) is the more common type of Robinow syndrome (RS) characterized by mild to moderate limb shortening and abnormalities of the head, face and external genitalia.","definition_xrefs":["Orphanet:3107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"Robinow syndrome","termid":"MONDO:0019978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant Robinow syndrome","secondary_identifiers":["UMLS:C5200540","MEDGEN:1675001","icd11.foundation:807338758","ICD9:759.89","SCTID:76520005","GARD:16620"],"synonyms":[{"name":"Robinow syndrome, autosomal dominant","type":"exact"},{"name":"Robinow syndrome, autosomal dominant type","type":"exact"},{"name":"autosomal dominant Robinow syndrome","type":"exact"}],"termid":"MONDO:0008389","xrefs":{"Monarch":{"xref_id":"0008389"}}}


id: PATO:0000734
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000734 abdominal tone value (obsolete PATO:0000734)","termid":"PATO:0000734"}


id: MONDO:0007738
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"CHST3-related skeletal dysplasia is a very rare bone disorder characterized clinically by short stature of prenatal onset; dislocation of the knees, hips or elbows; club feet; limitation of range of motion of large joints; progressive kyphosis; and occasional scoliosis. In a few patients, minor heart valve dysplasia has also been described. Intellect, vision and hearing are normal.","definition_xrefs":["Orphanet:263463"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with multiple joint dislocations (obsolete MONDO:0019700)","termid":"MONDO:0019700"},{"relation_name":"is_a","term_name":"mineral metabolism disease","termid":"MONDO:0000226"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0005066"],"is_obsolete":false,"name":"spondyloepiphyseal dysplasia with congenital joint dislocations","secondary_identifiers":["UMLS:C1837657","ICD9:756.9","MESH:C537283","DOID:0050813","GARD:13169","MEDGEN:373381","SCTID:702400006","OMIM:143095"],"synonyms":[{"name":"CHST3-related skeletal dysplasia","type":"exact"},{"name":"Gollop Coates syndrome","type":"related"},{"name":"Humerospinal dysostosis","type":"exact"},{"name":"Kozlowski Celermajer tink syndrome","type":"exact"},{"name":"Omani type","type":"exact"},{"name":"SDCD, CHST3 type","type":"exact"},{"name":"SEDCJD","type":"related"},{"name":"bifurcation of distal humerus with oligoectro-syndactyly","type":"related"},{"name":"chondrodysplasia with congenital joint dislocations, CHST3 type","type":"exact"},{"name":"chondrodysplasia with multiple dislocations","type":"exact"},{"name":"humero-spinal dysostosis with congenital heart disease","type":"exact"},{"name":"spondyloepiphyseal dysplasia","type":"broad"},{"name":"spondyloepiphyseal dysplasia with congenital JOINT dislocations","type":"related"},{"name":"spondyloepiphyseal dysplasia with congenital joint dislocations","type":"exact"},{"name":"spondyloepiphyseal dysplasia with congenital joint dyslocations, CHST3 type","type":"exact"},{"name":"spondyloepiphyseal dysplasia, Omani type","type":"related"}],"termid":"MONDO:0007738","xrefs":{"Monarch":{"xref_id":"0007738"}}}


id: PBO:0002957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mpv17/PMP22 family protein 1 (predicted)","termid":"PBO:0002957"}


id: PBO:0015237
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae RAM1","termid":"PBO:0015237"}


id: GO:0009835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An developmental maturation process that has as participant a fruit. Ripening causes changes in one or more characteristics of a fruit (color, aroma, flavor, texture, hardness, cell wall structure) and may make it more attractive to animals and aid in seed dispersal.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"fruit development","termid":"GO:0010154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fruit ripening","secondary_identifiers":["Wikipedia:Ripening"],"synonyms":[{"name":"fruit maturation","type":"related"},{"name":"fruit senescence","type":"related"}],"termid":"GO:0009835"}


id: PBO:0041064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRF2 RNA polymerase III transcription initiation factor subunit","termid":"PBO:0041064"}


id: PBO:0048534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gem nuclear organelle associated protein 8","termid":"PBO:0048534"}


id: PBO:0087534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of phosphatidylinositol (PtdIns) 3-kinase complexes I and II; Complex I is essential in autophagy, Complex II is required for vacuolar protein sorting; required for overflow degradation of misfolded proteins when ERAD is saturated; C-terminus has novel globular fold essential for autophagy through the targeting of the PI3-kinase complex I to the pre-autophagosomal structure; ortholog of higher eukaryote gene Beclin 1; human BECN1 can complement yeast null mutant","termid":"PBO:0087534"}


id: PBO:0046044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit C","termid":"PBO:0046044"}


id: PBO:0078597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 10, Y-linked","termid":"PBO:0078597"}


id: GO:0018652
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: toluene-4-sulfonate + NADH + O2 = NAD+ + OH- + 4-sulfobenzyl alcohol.","definition_xrefs":["RHEA:51024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"toluene-sulfonate methyl-monooxygenase activity","secondary_identifiers":["MetaCyc:TSMOS-RXN","UM-BBD_reactionID:r0290"],"synonyms":[{"name":"toluene-sulphonate methyl-monooxygenase activity","type":"exact"}],"termid":"GO:0018652"}


id: MONDO:0001078
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare disorder of the digestive tract characterized by malabsorption and anemia. It is likely caused by infection leading to small intestinal mucosal injury, bacterial overgrowth and inflammatory changes. It is most prevalent in residents and visitors to tropical and subtropical climates. Clinical signs include anorexia, abdominal bloating, diarrhea and weight loss. Clinical course may progress to deficiencies of folate, vitamin B12 and iron. Prognosis is favorable with nutrient replacement and antibiotic therapy, however relapses are common.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malabsorption syndrome","termid":"MONDO:0020598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"tropical sprue","secondary_identifiers":["ICD9:579.1","MEDGEN:21300","MESH:D013182","NCIT:C45428","SCTID:47384003","icd11.foundation:316377284","UMLS:C0038054","DOID:10607","ICD10CM:K90.1"],"synonyms":[{"name":"idiopathic tropical malabsorption syndrome","type":"related"},{"name":"post-infective tropical malabsorption","type":"exact"},{"name":"sprue - tropical","type":"exact"},{"name":"tropical enteropathy","type":"related"},{"name":"tropical steatorrhea","type":"exact"}],"termid":"MONDO:0001078","xrefs":{"Monarch":{"xref_id":"0001078"}}}


id: FYPO:0002448
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which Dsc E3 ubiquitin ligase complex assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal Dsc complex assembly","synonyms":[{"name":"normal Dsc E3 ubiquitin ligase assembly","type":"exact"},{"name":"normal Dsc complex assembly during mitotic cell cycle","type":"related"},{"name":"normal Dsc complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0002448"}


id: MOD:00952
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks an aspartic acid and the following glycine residue with the formation of (2-aminosuccinimidyl)acetic acid and the loss of a water molecule.","definition_xrefs":["RESID:AA0441#ASP","PubMed:10801322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"(2-aminosuccinimidyl)acetic acid","termid":"MOD:01628"},{"relation_name":"is_a","term_name":"crosslinked L-aspartic acid residue","termid":"MOD:02043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2-aminosuccinimidyl)acetic acid (Asp)","synonyms":[{"name":"(2-aminosuccinimidyl)acetic acid","type":"exact"},{"name":"(3-amino-2,5-dioxo-1-pyrrolidinyl)acetic acid","type":"exact"},{"name":"CROSSLNK (2-aminosuccinimidyl)acetic acid (Asp-Gly)","type":"exact"},{"name":"N-(2-aminosuccinyl)glycine","type":"exact"},{"name":"[(3S)-3-amino-2,5-dioxopyrrolidin-1-yl]acetic acid","type":"exact"},{"name":"anhydroaspartyl glycine","type":"exact"},{"name":"aspartimide glycine","type":"exact"}],"termid":"MOD:00952"}


id: MONDO:0032853
data:
  {"annotated_genes":["SJAG_04621"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88657],"is_not":false,"summary":null,"term":"MONDO:0032853"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04621":null},"genotype_count":0,"is_obsolete":false,"name":"myopathy, distal, 6, adult-onset, autosomal dominant","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1684760","OMIM:618655","UMLS:C5203349"],"synonyms":[{"name":"MPD6","type":"related"},{"name":"MYOPATHY, DISTAL, 6, ADULT-ONSET, AUTOSOMAL DOMINANT","type":"related"},{"name":"myopathy, distal, 6, adult onset","type":"exact"}],"termid":"MONDO:0032853","terms_by_termid":{"MONDO:0032853":null},"xrefs":{"Monarch":{"xref_id":"0032853"}}}


id: PBO:0069141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 392, pseudogene","termid":"PBO:0069141"}


id: MONDO:0014397
data:
  {"annotated_genes":["SJAG_02428"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88062],"is_not":false,"summary":null,"term":"MONDO:0014397"}]},"cv_name":"mondo","definition":"Any combined oxidative phosphorylation deficiency in which the cause of the disease is a mutation in the VARS2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02428":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"combined oxidative phosphorylation defect type 20","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17699","OMIM:615917","DOID:0111478","MEDGEN:863097","Orphanet:420728","UMLS:C4014660"],"synonyms":[{"name":"COXPD20","type":"exact"},{"name":"VARS2 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 20","type":"related"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in VARS2","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 20","type":"exact"}],"termid":"MONDO:0014397","terms_by_termid":{"MONDO:0014397":null},"xrefs":{"Monarch":{"xref_id":"0014397"}}}


id: PR:P0CT56
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1401 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT56"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S14-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H5.05c","synonyms":[{"name":"Spom972h-rps1401","type":"exact"}],"termid":"PR:P0CT56"}


id: MOD:00074
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to N-methyl-L-phenylalanine.","definition_xrefs":["RESID:AA0065","PubMed:2577730","PubMed:413571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated phenylalanine","termid":"MOD:01063"},{"relation_name":"is_a","term_name":"alpha-amino monomethylated residue","termid":"MOD:01680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methyl-L-phenylalanine","synonyms":[{"name":"(2S)-2-methylamino-3-phenylpropanoic acid","type":"exact"},{"name":"MOD_RES N-methylphenylalanine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"N-methyl-L-phenylalanine","type":"exact"},{"name":"N-methylated L-phenylalanine","type":"exact"},{"name":"N-methylphenylalanine","type":"exact"},{"name":"NMe1Phe","type":"exact"}],"termid":"MOD:00074"}


id: PBO:0039017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylformamidase","termid":"PBO:0039017"}


id: GO:2000426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of apoptotic cell clearance.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phagocytosis","termid":"GO:0050765"},{"relation_name":"is_a","term_name":"regulation of apoptotic cell clearance","termid":"GO:2000425"},{"relation_name":"negatively_regulates","term_name":"apoptotic cell clearance","termid":"GO:0043277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of apoptotic cell clearance","synonyms":[{"name":"negative regulation of apoptotic cell removal","type":"exact"},{"name":"negative regulation of efferocytosis","type":"exact"},{"name":"negative regulation of programmed cell clearance","type":"exact"}],"termid":"GO:2000426"}


id: GO:0140328
data:
  {"annotated_genes":["SJAG_02897","SJAG_00669","SJAG_01945","SJAG_03774","SJAG_01731","SJAG_05209"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114414],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034202"},{"annotations":[96243,102017,99745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090554"},{"annotations":[114356,101294,96245,99747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090556"}]},"cv_name":"molecular_function","definition":"Catalysis of the movement of a lipid from the cytosolic to the exoplasmic leaflet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["PMID:20043909","PMID:25284293","Wikipedia:Flippase"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled intramembrane lipid transporter activity","termid":"GO:0140326"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00669":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_02897":null,"SJAG_03774":null,"SJAG_05209":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140303"}],"interesting_parent_ids":["GO:0140303","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"floppase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"floppase activity (cytosolic to exoplasmic leaflet)","type":"exact"}],"termid":"GO:0140328","terms_by_termid":{"GO:0034202":null,"GO:0090554":null,"GO:0090556":null}}


id: PBO:0067987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 289","termid":"PBO:0067987"}


id: MONDO:0859478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure, X-linked, 6","secondary_identifiers":["OMIM:301101","UMLS:C5829562","DOID:0070597","MEDGEN:1840198"],"termid":"MONDO:0859478","xrefs":{"Monarch":{"xref_id":"0859478"}}}


id: FYPO:0008102
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of tRNA measured in a cell  is increased from normal when the cell is in the vegetative growth phase of the life cycle  during phosphate starvation.","definition_xrefs":["PMID:36794724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered tRNA or precursor level during vegetative growth","termid":"FYPO:0008101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased tRNA level during cellular response to phosphate starvation","synonyms":[{"name":"increased tRNA production during cellular response to phosphate starvation","type":"related"}],"termid":"FYPO:0008102"}


id: MONDO:0007766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Morgagni-Stewart-Morel syndrome is characterized by thickening of the inner table of the frontal bone, sometimes associated with obesity and hypertrichosis. It mainly affects women over 35 years of age. The prevalence and clinical significance of hyperostosis frontalis interna is unknown. Transmission is either X-linked or autosomal dominant.","definition_xrefs":["Orphanet:77296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Morgagni-Stewart-Morel syndrome","secondary_identifiers":["UMLS:C0020494","NORD:1268","OMIM:144800","NCIT:C84772","MEDGEN:9367","SCTID:82054006","GARD:8593","MESH:D006957"],"synonyms":[{"name":"Hyperostosis Frontalis Interna","type":"exact"},{"name":"MSM syndrome","type":"related"},{"name":"Morgagni-Stewart-Morel syndrome","type":"exact"},{"name":"hyperostosis frontalis interna","type":"exact"},{"name":"hyperostosis frontalis interna, obesity, shortness and cognitive impairment","type":"related"}],"termid":"MONDO:0007766","xrefs":{"Monarch":{"xref_id":"0007766"}}}


id: GO:0016354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclodiene susceptibility/resistance (obsolete GO:0016354)","synonyms":[{"name":"cyclodiene susceptibility/resistance","type":"exact"}],"termid":"GO:0016354"}


id: PBO:0072962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretogranin III","termid":"PBO:0072962"}


id: GO:0019950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by covalent attachment of the ubiquitin-like protein SMT3 to the target protein.","definition_xrefs":["PMID:9435231","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete SMT3-dependent protein catabolic process (obsolete GO:0019950)","synonyms":[{"name":"SMT3-dependent protein breakdown","type":"exact"},{"name":"SMT3-dependent protein catabolism","type":"exact"},{"name":"SMT3-dependent protein degradation","type":"exact"}],"termid":"GO:0019950"}


id: GO:0032055
data:
  {"annotated_genes":["SJAG_00169","SJAG_00786","SJAG_03869","SJAG_01942","SJAG_02592","SJAG_00690"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71679,96178,76982,101147,111518,117478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990625"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate of translation as a result of a stimulus indicating the organism is under stress.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation","termid":"GO:0017148"},{"relation_name":"is_a","term_name":"regulation of translation in response to stress","termid":"GO:0043555"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_01942":null,"SJAG_02592":null,"SJAG_03869":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of translation in response to stress","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of translation in response to stress","type":"exact"},{"name":"down-regulation of translation in response to stress","type":"exact"},{"name":"downregulation of translation in response to stress","type":"exact"},{"name":"inhibition of translation in response to stress","type":"narrow"}],"termid":"GO:0032055","terms_by_termid":{"GO:1990625":null}}


id: PBO:0077756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of outer mitochondrial membrane 20","termid":"PBO:0077756"}


id: GO:2001105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a maltoheptaoseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heptasaccharide transport","termid":"GO:2001104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"maltoheptaose transport","termid":"GO:2001105"}


id: PBO:0113030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of the DNA polymerase I alpha-primase complex; required for the initiation of DNA replication during mitotic DNA synthesis and premeiotic DNA synthesis; H3-H4 histone chaperone, downstream of Pol32p, involved in the transfer of parental histones to the lagging strand during DNA replication","termid":"PBO:0113030"}


id: PBO:0051547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 7","termid":"PBO:0051547"}


id: MOD:01056
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3',5'-dibromo-L-tyrosine","termid":"MOD:01023"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(79)Br labeled 3',5'-dibromotyrosine","termid":"MOD:01056"}


id: GO:0045060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of elimination of immature T cells in the thymus which react strongly with self-antigens.","definition_xrefs":["PMID:12414722","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative T cell selection","termid":"GO:0043383"},{"relation_name":"is_a","term_name":"thymic T cell selection","termid":"GO:0045061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative thymic T cell selection","synonyms":[{"name":"negative thymic T lymphocyte selection","type":"exact"},{"name":"negative thymic T-cell selection","type":"exact"},{"name":"negative thymic T-lymphocyte selection","type":"exact"}],"termid":"GO:0045060"}


id: PBO:0080584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 7","termid":"PBO:0080584"}


id: GO:0102451
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: kaempferide + S-adenosyl-L-methionine = 3,4'-O-dimethylkaempferol + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:74755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"kaempferide 3-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13937"],"termid":"GO:0102451"}


id: MONDO:0001945
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease believed to be caused by a viral illness that triggers degeneration of the nerve cells in the substantia nigra. Overall, this degeneration leads to clinical parkinsonism.","definition_xrefs":["Wikipedia:Postencephalitic_parkinsonism"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary Parkinson disease","termid":"MONDO:0006966"},{"relation_name":"is_a","term_name":"parkinsonian disorder","termid":"MONDO:0021095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"postencephalitic Parkinson disease","secondary_identifiers":["ICD10CM:G21.3","EFO:1001402","GARD:19370","MEDGEN:10591","NCIT:C34898","Orphanet:97349","SCTID:19972008","UMLS:C0030568","MESH:D010301","DOID:14332"],"synonyms":[{"name":"postencephalitic Parkinsonism","type":"exact"},{"name":"postencephalitic parkinsonism","type":"exact"}],"termid":"MONDO:0001945","xrefs":{"Monarch":{"xref_id":"0001945"}}}


id: GO:0033789
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 1,4-benzoquinone + H2O + phenylacetyl-CoA = 2 hydroquinone + phenylglyoxylyl-CoA.","definition_xrefs":["RHEA:15705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, quinone or similar compound as acceptor","termid":"GO:0033695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"phenylacetyl-CoA dehydrogenase activity","secondary_identifiers":["MetaCyc:1.17.5.1-RXN","EC:1.17.5.1","KEGG_REACTION:R07222"],"synonyms":[{"name":"phenylacetyl-CoA:acceptor oxidoreductase activity","type":"related"},{"name":"phenylacetyl-CoA:quinone oxidoreductase activity","type":"related"}],"termid":"GO:0033789"}


id: MONDO:0003869
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An abnormal growth of the cells that comprise the tissues of the brainstem. While the tumor may be histologically benign, it can produce great morbidity due to its location. It presents most commonly in the first two decades of life.","definition_xrefs":["NCIT:C9042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain stem glioma","termid":"MONDO:0002911"},{"relation_name":"is_a","term_name":"childhood brain stem neoplasm","termid":"MONDO:0002914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood brain stem glioma","secondary_identifiers":["MEDGEN:124481","UMLS:C0278600","DOID:6383","GARD:9306"],"synonyms":[{"name":"brain stem glioma","type":"broad"},{"name":"brain stem glioma of childhood","type":"exact"},{"name":"childhood brain stem glioma","type":"exact"},{"name":"childhood brainstem glioma","type":"exact"},{"name":"childhood glioma of brain stem","type":"exact"},{"name":"childhood glioma of brainstem","type":"exact"},{"name":"childhood glioma of the brain stem","type":"exact"},{"name":"childhood glioma of the brainstem","type":"exact"},{"name":"paediatric brain stem glioma","type":"exact"},{"name":"paediatric brainstem glioma","type":"exact"},{"name":"paediatric glioma of brain stem","type":"exact"},{"name":"paediatric glioma of brainstem","type":"exact"},{"name":"paediatric glioma of the brain stem","type":"exact"},{"name":"paediatric glioma of the brainstem","type":"exact"},{"name":"pediatric brain stem glioma","type":"exact"},{"name":"pediatric brainstem glioma","type":"exact"},{"name":"pediatric glioma of brain stem","type":"exact"},{"name":"pediatric glioma of brainstem","type":"exact"},{"name":"pediatric glioma of the brain stem","type":"exact"},{"name":"pediatric glioma of the brainstem","type":"exact"}],"termid":"MONDO:0003869","xrefs":{"Monarch":{"xref_id":"0003869"}}}


id: FYPO:0002445
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in actin cortical patches is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"protein mislocalized to actin cortical patch","synonyms":[{"name":"ectopic protein localization to actin cortical patch","type":"exact"},{"name":"protein mislocalised to actin cortical patch","type":"exact"},{"name":"protein mislocalised to actin cortical patch during vegetative growth","type":"exact"},{"name":"protein mislocalized to F-actin patch","type":"exact"},{"name":"protein mislocalized to actin cortical patch during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to actin cortical patch during vegetative growth","type":"exact"},{"name":"protein mislocalized to actin patch","type":"exact"}],"termid":"FYPO:0002445"}


id: GO:0097453
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Portion of the ensheathing process (either myelin or non-myelin) where the enveloping lips of the ensheathing cell come together so that their apposed plasma membranes run parallel to each other, separated by a cleft 12 nm wide.","definition_xrefs":["ISBN:0195065719","NIF_Subcellular:sao2127666702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ensheathing process","termid":"GO:1990015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"mesaxon","synonyms":[{"name":"mesaxon of Schwann cell","type":"narrow"}],"termid":"GO:0097453"}


id: GO:0050299
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + streptomycin = ADP + 2 H+ + streptomycin 3''-phosphate.","definition_xrefs":["EC:2.7.1.87","RHEA:18377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside phosphotransferase activity","termid":"GO:0034071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"streptomycin 3''-kinase activity","secondary_identifiers":["KEGG_REACTION:R02227","MetaCyc:STREPTOMYCIN-3-KINASE-RXN"],"synonyms":[{"name":"ATP:streptomycin 3''-phosphotransferase activity","type":"related"},{"name":"streptomycin 3''-kinase (phosphorylating)","type":"related"},{"name":"streptomycin 3''-phosphotransferase activity","type":"related"}],"termid":"GO:0050299"}


id: GO:0019533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cellobiose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Cellobiose, or 4-O-beta-D-glucopyranosyl-D-glucose, is a disaccharide that represents the basic repeating unit of cellulose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide transport","termid":"GO:0015766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"cellobiose transport","termid":"GO:0019533"}


id: MONDO:0044749
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked congenital stationary night blindness (XLCSNB) is a disorder of the retina. People with this condition typically experience night blindness and other vision problems, including loss of sharpness (reduced visual acuity), severe nearsightedness (myopia), nystagmus,and strabismus. Color vision is typically not affected. These vision problems are usually evident at birth, but tend to be stable (stationary) over time. There aretwo major types of XLCSNB: the complete form and the incomplete form. Bothtypes have very similar signs and symptoms. However, everyone with the complete form has night blindness, while not all people with the incomplete form have night blindness. The types are distinguished by their genetic cause.","definition_xrefs":["GARD:0003995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital stationary night blindness","termid":"MONDO:0016293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0002320"],"is_obsolete":false,"name":"X-linked congenital stationary night blindness","secondary_identifiers":["GARD:3995"],"synonyms":[{"name":"X-linked CSNB","type":"exact"},{"name":"XLCSNB","type":"exact"},{"name":"congenital stationary night blindness, X-linked","type":"exact"}],"termid":"MONDO:0044749","xrefs":{"Monarch":{"xref_id":"0044749"}}}


id: PBO:0070724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 29","termid":"PBO:0070724"}


id: PBO:0056033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphotoxin beta","termid":"PBO:0056033"}


id: PBO:0086064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that influences nuclear pore distribution; co-purifies with ribosomes; contains a GYF domain, which bind proline-rich sequences; deletion extends chronological lifespan; SYH1 has a paralog, SMY2, that arose from the whole genome duplication","termid":"PBO:0086064"}


id: GO:0072631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-29 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["PMID:15546383","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type III interferon production","termid":"GO:0034343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-29 production","secondary_identifiers":["GO:0072632"],"synonyms":[{"name":"IL-29 production","type":"exact"},{"name":"IL29 production","type":"exact"},{"name":"interferon lambda 1 production","type":"exact"},{"name":"interleukin-29 secretion","type":"narrow"}],"termid":"GO:0072631"}


id: PATO:0000442
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sleep pattern quality inhering in a bearer by virtue of the bearer's inability to sleep.","definition_xrefs":["WordNet:WordNet"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000442 insomnia (obsolete PATO:0000442)","termid":"PATO:0000442"}


id: PBO:0054560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1962","termid":"PBO:0054560"}


id: PBO:0078136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 15 (pseudogene)","termid":"PBO:0078136"}


id: PBO:0041731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin dependent protein kinase II inhibitor 2","termid":"PBO:0041731"}


id: PBO:0004467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body protein Ndc80","termid":"PBO:0004467"}


id: MONDO:0024639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated neuroendocrine tumor that arises from the stomach. It produces serotonin and it may occasionally be found in association with a carcinoid syndrome.","definition_xrefs":["NCIT:C27443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric neuroendocrine tumor, well differentiated, low or intermediate grade","termid":"MONDO:0015062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastric enterochromaffin cell serotonin-producing neuroendocrine tumor","secondary_identifiers":["UMLS:C3274137","MEDGEN:475770"],"synonyms":[{"name":"gastric EC cell serotonin-producing NET","type":"exact"},{"name":"gastric EC-cell serotonin-producing neuroendocrine tumor","type":"exact"},{"name":"gastric EC-cell serotonin-producing neuroendocrine tumour","type":"exact"},{"name":"gastric enterochromaffin cell serotonin-producing neuroendocrine tumor","type":"exact"}],"termid":"MONDO:0024639","xrefs":{"Monarch":{"xref_id":"0024639"}}}


id: GO:0097244
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a flavonol, a flavonoid that contains a 3-hydroxy-2-phenylchromen-4-one backbone.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"flavonoid binding","termid":"GO:0097243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"flavonol binding","termid":"GO:0097244"}


id: GO:0003144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the embryonic heart tube. This process pertains to the initial formation of a structure from unspecified parts. The embryonic heart tube is an epithelial tube that will give rise to the mature heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic epithelial tube formation","termid":"GO:0001838"},{"relation_name":"part_of","term_name":"embryonic heart tube morphogenesis","termid":"GO:0003143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic heart tube formation","termid":"GO:0003144"}


id: PBO:0013444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMARCAD1 family ATP-dependent DNA helicase Fft3","termid":"PBO:0013444"}


id: GO:0003348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a cardiac endothelial cell.","definition_xrefs":["GOC:dph","PMID:18722343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiocyte differentiation","termid":"GO:0035051"},{"relation_name":"is_a","term_name":"endothelial cell differentiation","termid":"GO:0045446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac endothelial cell differentiation","termid":"GO:0003348"}


id: MONDO:0008793
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiomatosis, diffuse Corticomeningeal, of Divry and van Bogaert","secondary_identifiers":["UMLS:C1859783","MESH:C536367","OMIM:206570","MEDGEN:347234"],"synonyms":[{"name":"Corticomeningeal angiomatosis, myelination of the white substance of the centrum ovale, hemianopsia and marbled skin","type":"related"},{"name":"Divry-Van Bogaert syndrome","type":"related"},{"name":"angiomatosis, diffuse Corticomeningeal, of Divry and van Bogaert","type":"exact"}],"termid":"MONDO:0008793","xrefs":{"Monarch":{"xref_id":"0008793"}}}


id: GO:0021988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the olfactory lobe over time from its initial formation until its mature state. The olfactory lobe is the area of the brain that process the neural inputs for the sense of smell.","definition_xrefs":["GOC:dph","GOC:jid","GOC:cls","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"telencephalon development","termid":"GO:0021537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory lobe development","termid":"GO:0021988"}


id: GO:0102293
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pheophytin b + H2O = H+ + pheophorbide b + phytol.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete pheophytinase b activity (obsolete GO:0102293)","termid":"GO:0102293"}


id: PBO:0078627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 77","termid":"PBO:0078627"}


id: GO:2000468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of peroxidase activity.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of peroxidase activity (obsolete GO:2000468)","synonyms":[{"name":"regulation of donor:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"regulation of oxyperoxidase activity","type":"exact"},{"name":"regulation of peroxidase reaction","type":"exact"}],"termid":"GO:2000468"}


id: MONDO:0010332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An X-linked syndromic intellectual disability characterized by moderate intellectual deficit, marked cubitus valgus, mild microcephaly, a short philtrum, deep-set eyes, downslanting palpebral fissures and multiple nevi. Less than ten individuals have been described so far. Transmission is thought to be X-linked recessive.","definition_xrefs":["Orphanet:85280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"X-linked intellectual disability-cubitus valgus-dysmorphism syndrome","secondary_identifiers":["MESH:C564510","OMIM:300471","MEDGEN:1801270","UMLS:C5677056","GARD:16745"],"synonyms":[{"name":"Cubitus valgus with mental retardation and unusual facies, X-linked recessive","type":"exact"},{"name":"cubitus valgus with intellectual disability and unusual facies","type":"related"},{"name":"cubitus valgus with mental retardation and unusual facies","type":"related"}],"termid":"MONDO:0010332","xrefs":{"Monarch":{"xref_id":"0010332"}}}


