# terms

id: MONDO:1010632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Factor VII deficiency that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"factor VII deficiency, non-human animal","termid":"MONDO:1010071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"factor VII deficiency, dog","secondary_identifiers":["OMIA:000361-9615"],"termid":"MONDO:1010632","xrefs":{"Monarch":{"xref_id":"1010632"}}}


id: FYPO:0004095
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein in a cell is normal (i.e. indistinguishable from wild type) during the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization","termid":"FYPO:0003627"},{"relation_name":"is_a","term_name":"normal cellular process during meiotic cell cycle","termid":"FYPO:0007277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization during meiotic cell cycle","synonyms":[{"name":"normal protein localisation during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0004095"}


id: GO:0180019
data:
  {"annotated_genes":["SJAG_04259","SJAG_03327"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[103152,115638],"is_not":false,"summary":null,"term":"GO:0180019"}]},"cv_name":"cellular_component","definition":"A kinetochore subcomplex that binds to centromeric chromatin and forms part of the outer kinetochore. It helps to recruit outer kinetochore subunits that will bind to microtubules. In humans and yeast respectively, it consists of KNL1/Spc105p and ZWINT/Kre28p.","definition_xrefs":["PMID:27881301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"outer kinetochore","termid":"GO:0000940"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03327":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0000776"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0000776","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"Knl1/Spc105 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180019","terms_by_termid":{"GO:0180019":null}}


id: GO:0018014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The methylation of the N-terminal methionine of proteins to form the derivative N-methyl-L-methionine.","definition_xrefs":["RESID:AA0064"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-methionine methylation (obsolete GO:0018014)","termid":"GO:0018014"}


id: PBO:0065708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridylate synthase 7 pseudogene 1","termid":"PBO:0065708"}


id: GO:0015616
data:
  {"annotated_genes":["SJAG_00980","SJAG_00871","SJAG_02460","SJAG_03832"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72782,79519,105002,115246],"is_not":false,"summary":null,"term":"GO:0015616"}]},"cv_name":"molecular_function","definition":"Generation of movement along a single- or double-stranded DNA molecule, driven by ATP hydrolysis.","definition_xrefs":["PMID:16428451","PMID:17631491","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity, acting on DNA","termid":"GO:0008094"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00871":null,"SJAG_00980":null,"SJAG_02460":null,"SJAG_03832":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140097","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"DNA translocase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0015616","terms_by_termid":{"GO:0015616":null}}


id: PBO:0086887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transmembrane polyol transporter; supports growth on and uptake of mannitol and sorbitol with moderate affinity when overexpressed in a strain deleted for hexose family members; minor hexose transport activity when overexpressed in a similar strain; induced by non-fermentable carbon sources; induced in low glucose, repressed in high glucose; HXT13 has a paralog, HXT17, that arose from a segmental duplication","termid":"PBO:0086887"}


id: PBO:0028335
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K16_acetylation_at_centromere_central_core","termid":"PBO:0028335"}


id: GO:0046869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron into a 2Fe-2S iron-sulfur cluster via tris-L-cysteinyl-L-aspartato diiron disulfide.","definition_xrefs":["RESID:AA0331"],"gene_count":0,"genotype_count":0,"name":"obsolete iron incorporation into iron-sulfur cluster via tris-L-cysteinyl-L-aspartato diiron disulfide (obsolete GO:0046869)","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via tris-L-cysteinyl-L-aspartato diiron disulphide","type":"exact"}],"termid":"GO:0046869"}


id: PATO:0000708
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A threshold which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"threshold","termid":"PATO:0000152"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased threshold","secondary_identifiers":["PATO:0000707"],"synonyms":[{"name":"low threshold","type":"exact"}],"termid":"PATO:0000708"}


id: PBO:0088927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEMO1 family, human MEMO1 ortholog, ancient conserved protein, in some organisms this domain is present with ammecr1 which interacts with mediator complex and is implicated in transcription, implicated in signalling and localization to the plasma membrane","termid":"PBO:0088927"}


id: GO:0031527
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a filopodium.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"part_of","term_name":"filopodium","termid":"GO:0030175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"filopodium membrane","termid":"GO:0031527"}


id: MONDO:1011472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Amyloidosis that occurs in golden hamster.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amyloidosis, non-human animal","termid":"MONDO:1011415"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloidosis, golden hamster","secondary_identifiers":["OMIA:000037-10036"],"termid":"MONDO:1011472","xrefs":{"Monarch":{"xref_id":"1011472"}}}


id: GO:0001865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a NK T cell.","definition_xrefs":["PMID:10704459","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta T cell differentiation","termid":"GO:0046632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"NK T cell differentiation","synonyms":[{"name":"NK T cell development","type":"related"},{"name":"NK T lymphocyte differentiation","type":"exact"},{"name":"NK T-cell differentiation","type":"exact"},{"name":"NK T-lymphocyte differentiation","type":"exact"},{"name":"NKT cell differentiation","type":"exact"},{"name":"NT cell differentiation","type":"exact"},{"name":"natural T cell differentiation","type":"exact"},{"name":"natural killer T cell differentiation","type":"exact"}],"termid":"GO:0001865"}


id: MONDO:0015114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare parenchymal liver disease (obsolete MONDO:0015114)","secondary_identifiers":["Orphanet:101939"],"termid":"MONDO:0015114","xrefs":{"Monarch":{"xref_id":"0015114"}}}


id: GO:0006018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of deoxyribose 1-phosphate, the phosphorylated sugar 1-phospho-2-deoxyribose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-deoxyribose 1-phosphate metabolic process","termid":"GO:0046384"},{"relation_name":"is_a","term_name":"deoxyribose phosphate catabolic process","termid":"GO:0046386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2-deoxyribose 1-phosphate catabolic process","synonyms":[{"name":"2-deoxyribose 1-phosphate breakdown","type":"exact"},{"name":"2-deoxyribose 1-phosphate catabolism","type":"exact"},{"name":"2-deoxyribose 1-phosphate degradation","type":"exact"},{"name":"deoxyribose 1-phosphate catabolic process","type":"exact"}],"termid":"GO:0006018"}


id: GO:0009825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell irreversibly increases in size in two or three [spatial] dimensions or along two or three axes.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell growth","termid":"GO:0016049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multidimensional cell growth","synonyms":[{"name":"cell growth in three dimensions","type":"exact"},{"name":"cell growth in two dimensions","type":"narrow"}],"termid":"GO:0009825"}


id: GO:0046847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a filopodium, a thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone.","definition_xrefs":["GOC:tb","PMID:16337369","GOC:dph","GOC:mah","PMID:18464790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"filopodium assembly","synonyms":[{"name":"filopodia biosynthesis","type":"related"},{"name":"filopodia formation","type":"related"},{"name":"filopodium formation","type":"related"}],"termid":"GO:0046847"}


id: GO:0003259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cardioblast toward the head and laterally to form the heart field. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardioblast migration","termid":"GO:0003260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardioblast anterior-lateral migration","termid":"GO:0003259"}


id: GO:0033713
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: choline + O2 = betaine aldehyde + hydrogen peroxide.","definition_xrefs":["RHEA:13505","EC:1.1.3.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"choline:oxygen 1-oxidoreductase activity","secondary_identifiers":["MetaCyc:CHOLINE-OXIDASE-RXN"],"synonyms":[{"name":"choline oxidase activity","type":"broad"}],"termid":"GO:0033713"}


id: PBO:0002419
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rapidly internalised","termid":"PBO:0002419"}


id: PBO:0039872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP29 antisense RNA 1","termid":"PBO:0039872"}


id: PBO:0038812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 19","termid":"PBO:0038812"}


id: PBO:0066597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHOQ antisense RNA 1","termid":"PBO:0066597"}


id: GO:1904068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any G protein-coupled receptor signaling pathway that is involved in social behavior.","definition_xrefs":["GOC:kmv","PMID:22665789","GOC:TermGenie","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"},{"relation_name":"part_of","term_name":"social behavior","termid":"GO:0035176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"G protein-coupled receptor signaling pathway involved in social behavior","synonyms":[{"name":"G protein coupled receptor protein signaling pathway involved in cooperative behavior","type":"related"},{"name":"G protein coupled receptor protein signaling pathway involved in social behavior","type":"exact"},{"name":"G protein coupled receptor protein signaling pathway involved in social behaviour","type":"exact"},{"name":"G protein coupled receptor protein signalling pathway involved in cooperative behavior","type":"related"},{"name":"G protein coupled receptor protein signalling pathway involved in social behavior","type":"exact"},{"name":"G protein coupled receptor protein signalling pathway involved in social behaviour","type":"exact"},{"name":"G-protein coupled receptor protein signal transduction involved in cooperative behavior","type":"related"},{"name":"G-protein coupled receptor protein signal transduction involved in social behavior","type":"exact"},{"name":"G-protein coupled receptor protein signal transduction involved in social behaviour","type":"exact"},{"name":"G-protein coupled receptor protein signaling pathway involved in cooperative behavior","type":"related"},{"name":"G-protein coupled receptor protein signaling pathway involved in social behavior","type":"exact"},{"name":"G-protein coupled receptor protein signaling pathway involved in social behaviour","type":"exact"},{"name":"G-protein coupled receptor signaling pathway involved in cooperative behavior","type":"related"},{"name":"G-protein coupled receptor signaling pathway involved in social behavior","type":"exact"},{"name":"G-protein coupled receptor signaling pathway involved in social behaviour","type":"exact"},{"name":"G-protein coupled receptor signalling pathway involved in cooperative behavior","type":"related"},{"name":"G-protein coupled receptor signalling pathway involved in social behavior","type":"exact"},{"name":"G-protein coupled receptor signalling pathway involved in social behaviour","type":"exact"},{"name":"G-protein-coupled receptor protein signaling pathway involved in cooperative behavior","type":"related"},{"name":"G-protein-coupled receptor protein signaling pathway involved in social behavior","type":"exact"},{"name":"G-protein-coupled receptor protein signaling pathway involved in social behaviour","type":"exact"},{"name":"G-protein-coupled receptor protein signalling pathway involved in cooperative behavior","type":"related"},{"name":"G-protein-coupled receptor protein signalling pathway involved in social behavior","type":"exact"},{"name":"G-protein-coupled receptor protein signalling pathway involved in social behaviour","type":"exact"},{"name":"GPCR signaling pathway involved in cooperative behavior","type":"related"},{"name":"GPCR signaling pathway involved in social behavior","type":"exact"},{"name":"GPCR signaling pathway involved in social behaviour","type":"exact"},{"name":"GPCR signalling pathway involved in cooperative behavior","type":"related"},{"name":"GPCR signalling pathway involved in social behavior","type":"exact"},{"name":"GPCR signalling pathway involved in social behaviour","type":"exact"}],"termid":"GO:1904068"}


id: MOD:01181
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to L-aspartate 4-methyl ester.","definition_xrefs":["PubMed:16888766","RESID:AA0435","OMSSA:69","PubMed:1556110","PubMed:9629898","Unimod:34#D"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methylated residue","termid":"MOD:00393"},{"relation_name":"is_a","term_name":"monomethylated L-aspartic acid","termid":"MOD:01681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"L-aspartic acid 4-methyl ester","synonyms":[{"name":"(2S)-2-amino-4-methoxy-4-oxobutanoic acid","type":"exact"},{"name":"2-aminobutanedioic acid 4-methyl ester","type":"exact"},{"name":"4-methyl L-2-aminosuccinic acid","type":"exact"},{"name":"4-methyl L-aspartate","type":"exact"},{"name":"4-methyl L-hydrogen aspartate","type":"exact"},{"name":"L-aspartic acid 4-methyl ester","type":"exact"},{"name":"Methyl","type":"related"},{"name":"O4MeAsp","type":"exact"},{"name":"aspartic acid 4-methyl ester","type":"exact"},{"name":"aspartic acid beta-methyl ester","type":"exact"},{"name":"meesterd","type":"exact"}],"termid":"MOD:01181"}


id: PBO:0031068
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_spore_with_abnormal_morphology","termid":"PBO:0031068"}


id: PBO:0041827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteinyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0041827"}


id: GO:0050422
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3alpha(S)-strictosidine + H2O = D-glucose + strictosidine aglycone.","definition_xrefs":["EC:3.2.1.105","RHEA:12917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"strictosidine beta-glucosidase activity","secondary_identifiers":["KEGG_REACTION:R03820","MetaCyc:STRICTOSIDINE-BETA-GLUCOSIDASE-RXN"],"synonyms":[{"name":"strictosidine b-glucosidase activity","type":"exact"},{"name":"strictosidine beta-D-glucohydrolase activity","type":"related"}],"termid":"GO:0050422"}


id: PBO:0072525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 54","termid":"PBO:0072525"}


id: PBO:0086345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs; acts on large and small rRNAs, on snRNA U2, and on some mRNAs; mutations in human ortholog dyskerin cause the disorder dyskeratosis congenita; small nucleolar ribonucleoprotein particles are also known as snoRNPs","termid":"PBO:0086345"}


id: FYPO:0002410
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, cell shape is altered, and cell size remains normal, and in which vacuoles are more visible (usually by microscopy) than normal.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"has_part","term_name":"vacuolated","termid":"FYPO:0001581"},{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"inviable vegetative cell, abnormal cell shape, normal cell size","termid":"FYPO:0001511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000004","FYPO:0001985","FYPO:0000005","FYPO:0000257"],"is_obsolete":false,"name":"inviable vacuolated vegetative cell, abnormal cell shape, normal cell size","synonyms":[{"name":"inviable vacuolated vegetative cell with abnormal cell shape and normal cell size","type":"related"},{"name":"inviable vacuolated vegetative cell, abnormal cell shape, normal cell length","type":"narrow"},{"name":"inviable vacuolated vegetative cell, abnormal cell shape, normal cell size during mitotic cell cycle","type":"related"},{"name":"inviable vegetative misshapen vacuolated cell","type":"related"},{"name":"inviable, vacuolated, abnormal cell shape, normal cell size during vegetative growth","type":"exact"},{"name":"lethal; vacuolated vegetative cell, abnormal cell shape, normal cell size","type":"exact"}],"termid":"FYPO:0002410"}


id: GO:1905826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of selenocysteine metabolic process.","definition_xrefs":["GOC:TermGenie","PMID:19716792","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amino acid metabolic process","termid":"GO:0045763"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of selenocysteine metabolic process","termid":"GO:1905825"},{"relation_name":"negatively_regulates","term_name":"selenocysteine metabolic process","termid":"GO:0016259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"negative regulation of selenocysteine metabolic process","synonyms":[{"name":"down regulation of selenocysteine metabolic process","type":"exact"},{"name":"down regulation of selenocysteine metabolism","type":"exact"},{"name":"down-regulation of selenocysteine metabolic process","type":"exact"},{"name":"down-regulation of selenocysteine metabolism","type":"exact"},{"name":"downregulation of selenocysteine metabolic process","type":"exact"},{"name":"downregulation of selenocysteine metabolism","type":"exact"},{"name":"inhibition of selenocysteine metabolic process","type":"narrow"},{"name":"inhibition of selenocysteine metabolism","type":"narrow"},{"name":"negative regulation of selenocysteine metabolism","type":"exact"}],"termid":"GO:1905826"}


id: MOD:01931
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-phospho-L-lysine.","definition_xrefs":["RESID:AA0585","PubMed:20144148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"N-phosphorylated residue","termid":"MOD:01456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"}],"interesting_parent_ids":["MOD:00696"],"is_obsolete":false,"name":"N6-phospho-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-(phosphonoamino)hexanoic acid","type":"exact"},{"name":"(2S)-2-azanyl-6-(phosphonoamino)hexanoic acid","type":"exact"},{"name":"6-phospholysine","type":"exact"},{"name":"N(6)-phosphonolysine","type":"exact"},{"name":"N(epsilon)-phospholysine","type":"exact"},{"name":"N(epsilon)-phosphonolysine","type":"exact"},{"name":"N(epsilon)-phosphonyllysine","type":"exact"},{"name":"N(epsilon)-phosphoryllysine","type":"exact"},{"name":"N6-phospho-L-lysine","type":"exact"}],"termid":"MOD:01931"}


id: MONDO:0012083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the GRHL2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 28","secondary_identifiers":["OMIM:608641","GARD:18124","DOID:0110557","MEDGEN:324846","MESH:C563890","UMLS:C1837640"],"synonyms":[{"name":"DFNA28","type":"narrow"},{"name":"GRHL2 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 28","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 28","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in GRHL2","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 28","type":"narrow"},{"name":"deafness, autosomal dominant 28","type":"narrow"},{"name":"deafness, autosomal dominant type 28","type":"narrow"}],"termid":"MONDO:0012083","xrefs":{"Monarch":{"xref_id":"0012083"}}}


id: PBO:0059734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 8","termid":"PBO:0059734"}


id: PATO:0000554
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000554 cold sensitive (obsolete PATO:0000554)","termid":"PATO:0000554"}


id: GO:0046171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of octanol, the 8-carbon alcohol with the formula C8H17OH.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"octanol metabolic process","termid":"GO:0006070"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"fatty alcohol biosynthetic process","termid":"GO:1903175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"octanol biosynthetic process","synonyms":[{"name":"octanol anabolism","type":"exact"},{"name":"octanol biosynthesis","type":"exact"},{"name":"octanol formation","type":"exact"},{"name":"octanol synthesis","type":"exact"}],"termid":"GO:0046171"}


id: GO:2000160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of planar cell polarity pathway involved in heart morphogenesis.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of planar cell polarity pathway involved in heart morphogenesis (obsolete GO:2000160)","termid":"GO:2000160"}


id: MONDO:0030473
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"genetic developmental and epileptic encephalopathy","termid":"MONDO:0100062"},{"relation_name":"is_a","term_name":"ATP1A3-associated neurological disorder","termid":"MONDO:0700002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy 99","secondary_identifiers":["OMIM:619606","UMLS:C5562018","DOID:0070385","MEDGEN:1794228"],"synonyms":[{"name":"DEE99","type":"exact"}],"termid":"MONDO:0030473","xrefs":{"Monarch":{"xref_id":"0030473"}}}


id: PATO:0001332
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphology quality inhering in a bearer by virtue of the bearer's lack of distinct morphology.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphology","termid":"PATO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amorphous","termid":"PATO:0001332"}


id: PBO:0063230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin related 15","termid":"PBO:0063230"}


id: PBO:0065084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase AMP-activated catalytic subunit alpha 1","termid":"PBO:0065084"}


id: MONDO:0014670
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any lethal congenital contracture syndrome in which the cause of the disease is a mutation in the ADGRG6 gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lethal congenital contracture syndrome","termid":"MONDO:0017436"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal congenital contracture syndrome 9","secondary_identifiers":["UMLS:C4225303","MEDGEN:903881","OMIM:616503"],"synonyms":[{"name":"ADGRG6 lethal congenital contracture syndrome","type":"exact"},{"name":"LCCS9","type":"related"},{"name":"lethal congenital contracture syndrome 9","type":"exact"},{"name":"lethal congenital contracture syndrome caused by mutation in ADGRG6","type":"exact"},{"name":"lethal congenital contracture syndrome type 9","type":"exact"}],"termid":"MONDO:0014670","xrefs":{"Monarch":{"xref_id":"0014670"}}}


id: PBO:0027309
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_5'_deoxyribonuclease_(pyrimidine_dimer)_activity","termid":"PBO:0027309"}


id: PBO:0001221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Ypt71","termid":"PBO:0001221"}


id: PBO:0059493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrophage stimulating 1 pseudogene 2","termid":"PBO:0059493"}


id: PBO:0068456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 32, pseudogene","termid":"PBO:0068456"}


id: GO:0050954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a sensory mechanical stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of mechanical stimulus","synonyms":[{"name":"chemi-mechanical coupling","type":"related"},{"name":"mechanosensory perception","type":"exact"},{"name":"perception of mechanical stimulus","type":"exact"}],"termid":"GO:0050954"}


id: GO:0062116
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chloroplast-derived plastid in which the solid form of phenol is stored.","definition_xrefs":["PMID:24683183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"phenyloplast","termid":"GO:0062116"}


id: PBO:0027014
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_positive_regulation_of_protein_kinase_activity","termid":"PBO:0027014"}


id: FYPO:0008389
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which activation of growth at the old end of a cell happens during cell division, before digestion of the septum.","definition_xrefs":["PMID:34523683"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal activation of monopolar cell growth","termid":"FYPO:0001393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"activation of monopolar cell growth at old end during septation","termid":"FYPO:0008389"}


id: GO:0048870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the controlled self-propelled movement of a cell that results in translocation of the cell from one place to another.","definition_xrefs":["GOC:dph","GOC:dgh","GOC:isa_complete","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell motility","synonyms":[{"name":"cell locomotion","type":"exact"},{"name":"cell movement","type":"related"},{"name":"movement of a cell","type":"exact"}],"termid":"GO:0048870"}


id: PBO:0085842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and to the nucleus; protein abundance increases in response to DNA replication stress","termid":"PBO:0085842"}


id: PBO:0075233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 6","termid":"PBO:0075233"}


id: PomGeneEx:0000012
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExRNA","definition":"A gene expression qualifier that indicates that an RNA is present at a lower level under one set of conditions or at one indicated time than otherwise.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased","termid":"PomGeneEx:0000003"},{"relation_name":"is_a","term_name":"RNA expression level","termid":"PomGeneEx:0000009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA level decreased","synonyms":[{"name":"RNA expression decreased","type":"exact"},{"name":"decreased RNA level","type":"exact"}],"termid":"PomGeneEx:0000012"}


id: PBO:0046917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 32 member A","termid":"PBO:0046917"}


id: MONDO:0009344
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hirschsprung disease - nail hypoplasia - dysmorphism is a fatal malformative disorder that is characterized by Hirschsprung disease, hypoplastic nails, distal limb hypoplasia and minor craniofacial dysmorphic features (flat facies, upward slanting palpebral fissures, narrow philtrum, narrow, high arched palate, micrognathia, low set ears with abnormal helices). Hydronephrosis has also been reported. There have been no further descriptions of Hirschsprung disease - nail hypoplasia - dysmorphism syndrome in the literature since 1988.","definition_xrefs":["Orphanet:2153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"intestinal motility disease","termid":"MONDO:0021189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Hirschsprung disease-nail hypoplasia-dysmorphism syndrome","secondary_identifiers":["MESH:C535615","GARD:584","UMLS:C1856110","OMIM:235760","MEDGEN:344653","SCTID:721223002"],"synonyms":[{"name":"Al Gazali-Donnai-Muller syndrome","type":"exact"},{"name":"Al-Gazali-Donnai-Mueller syndrome","type":"related"},{"name":"Hirschsprung disease with hypoplastic nails and dysmorphic facial features","type":"related"},{"name":"Hirschsprung's disease, hypoplastic nails, and minor dysmorphic features","type":"related"}],"termid":"MONDO:0009344","xrefs":{"Monarch":{"xref_id":"0009344"}}}


id: GO:0008511
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + K+(out) + Cl-(out) = Na+(in) + K+(in) + Cl-(in).","definition_xrefs":["TC:2.A.30.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium:sodium symporter activity","termid":"GO:0009674"},{"relation_name":"is_a","term_name":"sodium:chloride symporter activity","termid":"GO:0015378"},{"relation_name":"is_a","term_name":"potassium:chloride symporter activity","termid":"GO:0015379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"sodium:potassium:chloride symporter activity","secondary_identifiers":["Reactome:R-HSA-426086","Reactome:R-HSA-5623588","RHEA:72395"],"synonyms":[{"name":"sodium/potassium/chloride symporter activity","type":"exact"}],"termid":"GO:0008511"}


id: PBO:0056870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICALL2 divergent transcript","termid":"PBO:0056870"}


id: MONDO:0011421
data:
  {"annotated_genes":["SJAG_01503"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87278],"is_not":false,"summary":null,"term":"MONDO:0011421"}]},"cv_name":"mondo","definition":"Any mitochondrial proton-transporting ATP synthase complex deficiency in which the cause of the disease is a mutation in the ATPAF2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex deficiency","termid":"MONDO:0000066"},{"relation_name":"is_a","term_name":"mitochondrial proton-transporting ATP synthase complex deficiency","termid":"MONDO:0014471"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01503":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex V (ATP synthase) deficiency, nuclear type 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:604273","MEDGEN:477906","UMLS:C3276276","DOID:0050768","GARD:18660"],"synonyms":[{"name":"ATPAF2 mitochondrial proton-transporting ATP synthase complex deficiency","type":"exact"},{"name":"Complex 5 mitochondrial respiratory chain deficiency","type":"related"},{"name":"MC5DN1","type":"exact"},{"name":"mitochondrial Complex 5 (ATP synthase) deficiency, Atpaf2 type","type":"related"},{"name":"mitochondrial Complex 5 (ATP synthase) deficiency, nuclear type 1","type":"related"},{"name":"mitochondrial complex V (ATP synthase) deficiency, nuclear type 1","type":"exact"},{"name":"mitochondrial complex V deficiency","type":"broad"},{"name":"mitochondrial proton-transporting ATP synthase complex deficiency caused by mutation in ATPAF2","type":"exact"}],"termid":"MONDO:0011421","terms_by_termid":{"MONDO:0011421":null},"xrefs":{"Monarch":{"xref_id":"0011421"}}}


id: PBO:0059208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myoregulin","termid":"PBO:0059208"}


id: GO:0002762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of myeloid leukocyte differentiation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte differentiation","termid":"GO:0002761"},{"relation_name":"is_a","term_name":"negative regulation of myeloid cell differentiation","termid":"GO:0045638"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte differentiation","termid":"GO:1902106"},{"relation_name":"negatively_regulates","term_name":"myeloid leukocyte differentiation","termid":"GO:0002573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of myeloid leukocyte differentiation","synonyms":[{"name":"down regulation of myeloid leukocyte differentiation","type":"exact"},{"name":"down-regulation of myeloid leukocyte differentiation","type":"exact"},{"name":"downregulation of myeloid leukocyte differentiation","type":"exact"},{"name":"inhibition of myeloid leukocyte differentiation","type":"narrow"}],"termid":"GO:0002762"}


id: PBO:0058878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10394","termid":"PBO:0058878"}


id: MONDO:0100245
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acquired paroxysmal nocturnal hemoglobinuria (obsolete MONDO:0100245)","termid":"MONDO:0100245","xrefs":{"Monarch":{"xref_id":"0100245"}}}


id: GO:0009075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving amino acids of the histidine family.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete histidine family amino acid metabolic process (obsolete GO:0009075)","synonyms":[{"name":"histidine family amino acid metabolic process","type":"exact"},{"name":"histidine family amino acid metabolism","type":"exact"}],"termid":"GO:0009075"}


id: GO:0120162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cold-induced thermogenesis.","definition_xrefs":["PMID:27876809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of cold-induced thermogenesis","termid":"GO:0120161"},{"relation_name":"positively_regulates","term_name":"cold-induced thermogenesis","termid":"GO:0106106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cold-induced thermogenesis","synonyms":[{"name":"positive regulation of CIT","type":"related"}],"termid":"GO:0120162"}


id: PBO:0041002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BORA aurora kinase A activator","termid":"PBO:0041002"}


id: PBO:0089754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin 13","termid":"PBO:0089754"}


id: GO:0018721
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: trans-9R,10R-dihydrodiolphenanthrene + 2 X-SO3(-) = 2 HX + phenanthrene-9,10-dihydrodiolsulfate conjugate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-9R,10R-dihydrodiolphenanthrene sulfotransferase activity (obsolete GO:0018721)","synonyms":[{"name":"trans-9R,10R-dihydrodiolphenanthrene sulphotransferase activity","type":"exact"}],"termid":"GO:0018721"}


id: PBO:0068244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 28S ribosomal 1","termid":"PBO:0068244"}


id: GO:0000338
data:
  {"annotated_genes":["SJAG_03733","SJAG_05977","SJAG_03325","SJAG_00795","SJAG_04011","SJAG_02764","SJAG_00720","SJAG_02341","SJAG_00776","SJAG_04948"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72760,80539,82192,91454,93266,94700,94821,97114,108325,112180],"is_not":false,"summary":null,"term":"GO:0000338"}]},"cv_name":"biological_process","definition":"The removal of a ubiquitin-like protein of the NEDD8 type from a protein.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification by small protein removal","termid":"GO:0070646"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00720":null,"SJAG_00776":null,"SJAG_00795":null,"SJAG_02341":null,"SJAG_02764":null,"SJAG_03325":null,"SJAG_03733":null,"SJAG_04011":null,"SJAG_04948":null,"SJAG_05977":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein deneddylation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0010388"],"synonyms":[{"name":"cullin deneddylation","type":"narrow"}],"termid":"GO:0000338","terms_by_termid":{"GO:0000338":null}}


id: GO:0062140
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A septin collar in pathogenic fungi involved in the constriction of hyphae at the plant plasmodesma enabling penetration of an adjacent cell.","definition_xrefs":["PMID:29567712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin collar","termid":"GO:0032173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"hyphae septin collar","synonyms":[{"name":"septin collar of invasive hyphae","type":"related"}],"termid":"GO:0062140"}


id: GO:0140297
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a DNA-binding transcription factor, a protein that interacts with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription.","definition_xrefs":["GOC:txnOH-2018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor binding","termid":"GO:0008134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"DNA-binding transcription factor binding","secondary_identifiers":["GO:0001107","GO:0033613","GO:0070491"],"synonyms":[{"name":"activating transcription factor binding","type":"related"},{"name":"repressing transcription factor binding","type":"related"},{"name":"transcription activator binding","type":"related"}],"termid":"GO:0140297"}


id: PATO:0000685
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000685 relative incidence value (obsolete PATO:0000685)","termid":"PATO:0000685"}


id: MONDO:0015608
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute myeloid leukemia and myelodysplastic syndromes related to radiation represent a subgroup of therapy-related myeloid neoplasms (t-MN), associated with treatment of an unrelated neoplastic disease with radiation. The neoplastic cells typically harbor unbalanced aberrations of chromosomes 5 and 7 (monosomy 5/del(5q) and monosomy 7/del(7q)) or a complex karyotype. Patients frequently present with multilineage dysplasia and cytopenias 5-10 years after exposure.","definition_xrefs":["Orphanet:164726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"therapy related acute myeloid leukemia and myelodysplastic syndrome","termid":"MONDO:0019457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"acute myeloid leukemia and myelodysplastic syndromes related to radiation","secondary_identifiers":["MEDGEN:1637827","UMLS:C4707660","GARD:20057"],"synonyms":[{"name":"AML and myelodysplastic syndromes related to radiation","type":"exact"}],"termid":"MONDO:0015608","xrefs":{"Monarch":{"xref_id":"0015608"}}}


id: PBO:0033778
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_guanyl-nucleotide_exchange_factor_activity","termid":"PBO:0033778"}


id: MONDO:0013849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive primary microcephaly in which the cause of the disease is a mutation in the CEP135 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly 8, primary, autosomal recessive","secondary_identifiers":["UMLS:C3553414","DOID:0070282","GARD:15833","MEDGEN:766328","OMIM:614673"],"synonyms":[{"name":"CEP135 autosomal recessive primary microcephaly","type":"exact"},{"name":"MCPH8","type":"related"},{"name":"autosomal recessive primary microcephaly caused by mutation in CEP135","type":"exact"},{"name":"microcephaly 8, primary, autosomal recessive","type":"exact"}],"termid":"MONDO:0013849","xrefs":{"Monarch":{"xref_id":"0013849"}}}


id: PBO:0027018
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_telomeric_repeat_sequence","termid":"PBO:0027018"}


id: PBO:0116776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSNAX divergent transcript","termid":"PBO:0116776"}


id: MONDO:0017608
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dystrophic epidermolysis bullosa (obsolete MONDO:0017608)","secondary_identifiers":["NANDO:2201343"],"termid":"MONDO:0017608","xrefs":{"Monarch":{"xref_id":"0017608"}}}


id: SO:0000910
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene whose predicted amino acid sequence is unsupported by any experimental evidence or by any match with any other known sequence.","direct_ancestors":[{"relation_name":"is_a","term_name":"predicted","termid":"SO:0000732"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orphan","termid":"SO:0000910"}


id: FYPO:0004273
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of ascospore release from an ascus is decreased.","definition_xrefs":["PomBase:mah","GO:0071998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ascospore release from ascus","termid":"FYPO:0004272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased ascospore release from ascus","synonyms":[{"name":"reduced ascospore release from ascus","type":"exact"}],"termid":"FYPO:0004273"}


id: GO:1904732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of electron transfer activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:25416781"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of electron transfer activity (obsolete GO:1904732)","synonyms":[{"name":"regulation of 2Fe-2S electron transfer carrier","type":"narrow"},{"name":"regulation of 3Fe-4S/4Fe-4S electron transfer carrier","type":"narrow"},{"name":"regulation of adrenodoxin-type ferredoxin","type":"narrow"},{"name":"regulation of amicyanin","type":"narrow"},{"name":"regulation of azurin","type":"narrow"},{"name":"regulation of bacterial-type ferredoxin","type":"narrow"},{"name":"regulation of chloroplast-type ferredoxin","type":"narrow"},{"name":"regulation of copper electron carrier","type":"narrow"},{"name":"regulation of dicluster bacterial-type ferredoxin","type":"narrow"},{"name":"regulation of electron acceptor activity","type":"narrow"},{"name":"regulation of electron carrier, chlorophyll electron transport system","type":"related"},{"name":"regulation of electron donor activity","type":"narrow"},{"name":"regulation of electron transfer flavoprotein","type":"narrow"},{"name":"regulation of electron transfer flavoprotein, group I","type":"narrow"},{"name":"regulation of electron transfer flavoprotein, group II","type":"narrow"},{"name":"regulation of electron transporter activity","type":"exact"},{"name":"regulation of high-potential iron-sulfur carrier","type":"narrow"},{"name":"regulation of iron-sulfur electron transfer carrier","type":"narrow"},{"name":"regulation of monocluster bacterial-type ferredoxin","type":"narrow"},{"name":"regulation of mononuclear iron electron carrier","type":"narrow"},{"name":"regulation of polyferredoxin","type":"narrow"},{"name":"regulation of redox-active disulfide bond electron carrier","type":"narrow"},{"name":"regulation of rubredoxin","type":"narrow"},{"name":"regulation of small blue copper electron carrier","type":"narrow"},{"name":"regulation of thioredoxin-like 2Fe-2S ferredoxin","type":"narrow"}],"termid":"GO:1904732"}


id: PBO:0030361
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_cellular_response_to_hypoxia","termid":"PBO:0030361"}


id: PBO:0109075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 16 like (pseudogene)","termid":"PBO:0109075"}


id: FYPO:0004453
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is decreased during a cellular response to calcium ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleus during vegetative growth","termid":"FYPO:0001514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to nucleus during cellular response to calcium ion","synonyms":[{"name":"decreased protein localisation to nucleus during cellular response to calcium ion","type":"exact"},{"name":"decreased protein localization to nucleus during cellular response to calcium ion during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to nucleus during cellular response to calcium ion during vegetative growth","type":"exact"},{"name":"reduced protein localization to nucleus during cellular response to calcium ion","type":"exact"}],"termid":"FYPO:0004453"}


id: PBO:0080936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YY1 transcription factor pseudogene 2","termid":"PBO:0080936"}


id: PBO:0003987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase Ppa2","termid":"PBO:0003987"}


id: MONDO:0015172
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. This syndrome is characterized by the association of severe congenital colitis with sensorineural deafness.","definition_xrefs":["Orphanet:103912"],"gene_count":0,"genotype_count":0,"name":"obsolete epithelio-exfoliative colitis-deafness syndrome (obsolete MONDO:0015172)","termid":"MONDO:0015172","xrefs":{"Monarch":{"xref_id":"0015172"}}}


id: GO:0035516
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a methylated nucleobase within DNA + 2-oxoglutarate + O2 = a nucleobase within DNA + formaldehyde + succinate + CO2. Catalyzes oxidative demethylation of the DNA base lesions N1- methyladenine, N3-methylcytosine, N1-methylguanine, and N3- methylthymine. Can also act of RNA.","definition_xrefs":["PMID:18775698","PMID:16482161","RHEA:30299","PMID:19786499","PMID:12594517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"DNA demethylase activity","termid":"GO:0035514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0140097","GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"broad specificity oxidative DNA demethylase activity","secondary_identifiers":["EC:1.14.11.33","Reactome:R-HSA-112118","MetaCyc:RXN-12353","Reactome:R-HSA-112123","GO:0103051","GO:0103053","GO:0103052"],"synonyms":[{"name":"1-ethyladenine demethylase activity","type":"narrow"},{"name":"2-oxoglutarate-dependent DNA demethylase","type":"exact"},{"name":"5-formylcytosine dioxygenase activity","type":"narrow"},{"name":"5-hydroxymethylcytosine dioxygenase activity","type":"narrow"},{"name":"5fC dioxygenase","type":"narrow"},{"name":"5hmC dioxygenase","type":"narrow"},{"name":"N1-methyladenine demethylase activity","type":"narrow"},{"name":"N3-methylcytosine demethylase activity","type":"narrow"},{"name":"oxidative DNA demethylase activity","type":"broad"}],"termid":"GO:0035516"}


id: GO:0002816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of biosynthesis of antibacterial peptides active against Gram-positive bacteria.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antibacterial peptide biosynthetic process","termid":"GO:0002808"},{"relation_name":"regulates","term_name":"biosynthetic process of antibacterial peptides active against Gram-positive bacteria","termid":"GO:0002815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria","termid":"GO:0002816"}


id: PBO:0109656
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae MDI1","termid":"PBO:0109656"}


id: PBO:0090052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex linker Mto2","termid":"PBO:0090052"}


id: PBO:0080792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XPC complex subunit, DNA damage recognition and repair factor","termid":"PBO:0080792"}


id: PBO:0077914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPT1 pseudogene 5","termid":"PBO:0077914"}


id: GO:1902215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of interleukin-4-mediated signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:17210636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"regulation of interleukin-4-mediated signaling pathway","termid":"GO:1902214"},{"relation_name":"negatively_regulates","term_name":"interleukin-4-mediated signaling pathway","termid":"GO:0035771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of interleukin-4-mediated signaling pathway","synonyms":[{"name":"down regulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"down regulation of interleukin-4-mediated signaling pathway","type":"exact"},{"name":"down regulation of interleukin-4-mediated signalling pathway","type":"exact"},{"name":"down-regulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"down-regulation of interleukin-4-mediated signaling pathway","type":"exact"},{"name":"down-regulation of interleukin-4-mediated signalling pathway","type":"exact"},{"name":"downregulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"downregulation of interleukin-4-mediated signaling pathway","type":"exact"},{"name":"downregulation of interleukin-4-mediated signalling pathway","type":"exact"},{"name":"inhibition of IL-4-mediated signaling pathway","type":"narrow"},{"name":"inhibition of interleukin-4-mediated signaling pathway","type":"narrow"},{"name":"inhibition of interleukin-4-mediated signalling pathway","type":"narrow"},{"name":"negative regulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"negative regulation of interleukin-4-mediated signalling pathway","type":"exact"}],"termid":"GO:1902215"}


id: PBO:0080692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WNK lysine deficient protein kinase 4","termid":"PBO:0080692"}


id: GO:0008242
data:
  {"annotated_genes":["SJAG_01612","SJAG_03316"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75500,80313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036374"}]},"cv_name":"molecular_function","definition":"Catalysis of the cleavage of non-standard peptide bonds releasing substituted amino acids such as pyroglutamate or cleave isopeptide bonds, such as many deubiquitinating enzymes.","definition_xrefs":["EC:3.4.19.-","PMID:9920379","PMID:20157488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activity","termid":"GO:0008233"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01612":null,"SJAG_03316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0003674","GO:0008233","GO:0016787","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"omega peptidase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-5696365"],"synonyms":[{"name":"peptidase activity, acting on peptides containing modified amino acids","type":"related"}],"termid":"GO:0008242","terms_by_termid":{"GO:0036374":null}}


id: PBO:0028872
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_poly(A)_tail_length","termid":"PBO:0028872"}


id: PBO:0049580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3.4 histone, cluster member","termid":"PBO:0049580"}


id: GO:0015406
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete ABC-type uptake permease activity (obsolete GO:0015406)","synonyms":[{"name":"ABC-type uptake permease activity","type":"exact"}],"termid":"GO:0015406"}


id: PBO:0050768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family H (Hsp110) member 1","termid":"PBO:0050768"}


id: PBO:0113749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDHC pseudogene 5","termid":"PBO:0113749"}


id: GO:0016758
data:
  {"annotated_genes":["SJAG_01972","SJAG_03953","SJAG_04770","SJAG_00747","SJAG_00816","SJAG_05327","SJAG_02996","SJAG_03790","SJAG_04095","SJAG_04401","SJAG_01264","SJAG_04878","SJAG_03066","SJAG_03587","SJAG_02903","SJAG_04053","SJAG_04868","SJAG_02168","SJAG_03656","SJAG_02804","SJAG_04119","SJAG_00437","SJAG_03764","SJAG_00442","SJAG_03149","SJAG_03555","SJAG_01021","SJAG_03150","SJAG_00598","SJAG_01288","SJAG_01276","SJAG_02913","SJAG_04571","SJAG_00876","SJAG_06383","SJAG_04952","SJAG_00183","SJAG_03311","SJAG_04236","SJAG_03082","SJAG_05285","SJAG_01950","SJAG_03057","SJAG_04127","SJAG_02102","SJAG_03333","SJAG_04821","SJAG_00394","SJAG_00506","SJAG_03115","SJAG_03871","SJAG_04316","SJAG_00129","SJAG_02222","SJAG_02916","SJAG_04184","SJAG_00334","SJAG_01491","SJAG_04906","SJAG_02519","SJAG_00295","SJAG_03878","SJAG_03056","SJAG_04881","SJAG_01427","SJAG_01028","SJAG_01531"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115021,77582,76524,81752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003843"},{"annotations":[102877,80591,95158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003825"},{"annotations":[100598,100738,119920,100596,100595,100597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031278"},{"annotations":[78717,76424,76553,81081,79266,79755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000026"},{"annotations":[112557,112563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001962"},{"annotations":[72373,73158,75096,75268,80517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047657"},{"annotations":[119653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033840"},{"annotations":[82177,73749,71797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000009"},{"annotations":[117682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140752"},{"annotations":[75978,76186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004100"},{"annotations":[69630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004578"},{"annotations":[104864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180041"},{"annotations":[93038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120563"},{"annotations":[117071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120564"},{"annotations":[99914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120565"},{"annotations":[78343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052925"},{"annotations":[63464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052926"},{"annotations":[61764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052917"},{"annotations":[63463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052918"},{"annotations":[81761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042283"},{"annotations":[70726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106073"},{"annotations":[78964],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042281"},{"annotations":[80996,78153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004579"},{"annotations":[59073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004582"},{"annotations":[68173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004581"},{"annotations":[71598,76682,78950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004169"},{"annotations":[107592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047220"},{"annotations":[61421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004378"},{"annotations":[61422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102704"},{"annotations":[78592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004377"},{"annotations":[104121,89317],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033164"},{"annotations":[99316],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045140"},{"annotations":[97546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0103064"},{"annotations":[77208,97070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000030"},{"annotations":[64380,100493],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004577"},{"annotations":[94810,110423,113453,94900,79209,119102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017176"},{"annotations":[81285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003980"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor).","definition_xrefs":["EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosyltransferase 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id: PR:000037297
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase cds1 (Schizosaccharomyces pombe) that has been phosphorylated on the Thr residue in the second TQ motif by rad3, and further phosphorylated a second Thr within the activation loop by autocatalysis. Example: UniProtKB:Q09170, Thr-11/Thr-328, MOD:00047.","definition_xrefs":["PomBase:AL","PMID:19357077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine/threonine-protein kinase cds1 (Schizosaccharomyces pombe)","termid":"PR:000030002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cds1/Phos(T11,T328)","pombase_gene_id":"SPCC18B5.11c","synonyms":[{"name":"PomBase_original_PRO_term_name: serine/threonine-protein kinase cds1 phosphorylated 2 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-CHEK2/Phos:2","type":"exact"},{"name":"cds1 T328-P","type":"related"},{"name":"cds1/Phos(T11,T328)","type":"exact"}],"termid":"PR:000037297"}


id: PBO:0087659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the HOPS endocytic tethering complex; vacuole membrane protein that functions as a Rab GTPase effector, interacting specifically with the GTP-bound conformation of Ypt7p, facilitating tethering, docking and promoting membrane fusion events at the late endosome and vacuole; required for both membrane and protein trafficking; Yck3p-mediated phosphorylation regulates the organization of vacuolar fusion sites","termid":"PBO:0087659"}


id: GO:0009841
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A Clp endopeptidase complex located in the mitochondrion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase Clp complex","termid":"GO:0009368"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005737","GO:0005739","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"mitochondrial endopeptidase Clp complex","termid":"GO:0009841"}


id: MONDO:0000892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, invasive colon adenocarcinoma characterized by the presence of sheets of malignant epithelial cells with vesicular nuclei, prominent nucleoli, and abundant eosinophilic cytoplasm. It usually has a favorable prognosis.","definition_xrefs":["NCIT:C60641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colon adenocarcinoma","termid":"MONDO:0002271"},{"relation_name":"is_a","term_name":"colorectal medullary carcinoma","termid":"MONDO:0020794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"colon medullary carcinoma","secondary_identifiers":["MEDGEN:363630","ONCOTREE:CMC","DOID:0080183","UMLS:C1880119"],"synonyms":[{"name":"colon medullary carcinoma","type":"exact"},{"name":"medullary carcinoma of the colon","type":"related"},{"name":"medullary colon carcinoma","type":"related"}],"termid":"MONDO:0000892","xrefs":{"Monarch":{"xref_id":"0000892"}}}


id: GO:0031589
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell to the underlying substrate via adhesion molecules.","definition_xrefs":["GOC:pf","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion","termid":"GO:0007155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell-substrate adhesion","termid":"GO:0031589"}


id: MONDO:0005254
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A heart failure which results in symptoms such as shortness of breath, fatigue, inability to exerciseb& etc","definition_xrefs":["EFO:0003146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart failure","termid":"MONDO:0005252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"symptomatic heart failure","termid":"MONDO:0005254","xrefs":{"Monarch":{"xref_id":"0005254"}}}


id: PBO:0055140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2559","termid":"PBO:0055140"}


id: FYPO:0004441
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of calcium ion measured in the cytosol is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular calcium level","termid":"FYPO:0001197"},{"relation_name":"is_a","term_name":"decreased level of substance in cytosol","termid":"FYPO:0001605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cytosolic calcium level","synonyms":[{"name":"decreased cytosolic calcium ion level","type":"exact"},{"name":"decreased cytosolic calcium ion level during vegetative growth","type":"exact"},{"name":"decreased cytosolic calcium level during mitotic cell cycle","type":"related"},{"name":"decreased level of calcium ions in cytosol","type":"exact"},{"name":"decreased levels of free cytosolic calcium","type":"exact"},{"name":"reduced cytosolic calcium level","type":"exact"}],"termid":"FYPO:0004441"}


id: PBO:0080169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 4","termid":"PBO:0080169"}


id: MONDO:1012476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"attention deficit hyperactivity disorder, non-human animal","termid":"MONDO:1011638"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attention deficit hyperactivity disorder, dog","secondary_identifiers":["OMIA:001882-9615"],"termid":"MONDO:1012476","xrefs":{"Monarch":{"xref_id":"1012476"}}}


id: GO:0047350
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-phospho-alpha-D-glucuronate + UTP = diphosphate + UDP-alpha-D-glucuronate.","definition_xrefs":["RHEA:16325","EC:2.7.7.44"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uridylyltransferase activity","termid":"GO:0070569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016779","GO:0003824"],"is_obsolete":false,"name":"glucuronate-1-phosphate uridylyltransferase activity","secondary_identifiers":["MetaCyc:2.7.7.44-RXN","KEGG_REACTION:R01381"],"synonyms":[{"name":"UDP-D-glucuronic acid pyrophosphorylase activity","type":"related"},{"name":"UDP-glucuronate pyrophosphorylase activity","type":"related"},{"name":"UDP-glucuronic acid pyrophosphorylase activity","type":"related"},{"name":"UTP:1-phospho-alpha-D-glucuronate uridylyltransferase activity","type":"related"},{"name":"UTP:glucuronate-1-phosphate uridylyltransferase activity","type":"exact"},{"name":"uridine diphosphoglucuronic pyrophosphorylase activity","type":"related"}],"termid":"GO:0047350"}


id: FYPO:0000036
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize asparagine, and therefore requires asparagine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for asparagine","synonyms":[{"name":"asparagine auxotrophy","type":"exact"},{"name":"growth auxotrophic for asparagine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for asparagine during vegetative growth","type":"exact"}],"termid":"FYPO:0000036"}


id: PBO:0044132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTBP1 antisense RNA","termid":"PBO:0044132"}


id: GO:0097333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an olanzapine stimulus.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to olanzapine","termid":"GO:0097333"}


id: PR:P0CT69
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl2002 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT69"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L20-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26A3.04","synonyms":[{"name":"Spom972h-rpl2002","type":"exact"},{"name":"YL17 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT69"}


id: PBO:0084898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial translation release factor; involved in stop codon recognition and hydrolysis of the peptidyl-tRNA bond during mitochondrial translation; lack of MRF1 causes mitochondrial genome instability","termid":"PBO:0084898"}


id: PBO:0042206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin I","termid":"PBO:0042206"}


id: MONDO:0009539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute lymphoblastic leukemia","termid":"MONDO:0004967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"lymphoblastic leukemia, acute, with lymphomatous features","secondary_identifiers":["MEDGEN:340879","MESH:C565429","UMLS:C1855472","OMIM:247640"],"synonyms":[{"name":"lall","type":"related"},{"name":"leukemia, acute lymphoblastic","type":"exact"},{"name":"lymphoblastic leukemia, acute, with lymphomatous features","type":"exact"},{"name":"lymphomatous All","type":"related"}],"termid":"MONDO:0009539","xrefs":{"Monarch":{"xref_id":"0009539"}}}


id: PBO:0084396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm (Like Sm) protein; part of heteroheptameric complexes (Lsm2p-7p and either Lsm1p or 8p): cytoplasmic Lsm1p complex involved in mRNA decay; nuclear Lsm8p complex part of U6 snRNP and possibly involved in processing tRNA, snoRNA, and rRNA; protein abundance increases and forms cytoplasmic foci in response to DNA replication stress","termid":"PBO:0084396"}


id: GO:0045902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the ability of the translational apparatus to interpret the genetic code.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational fidelity","termid":"GO:0006450"},{"relation_name":"is_a","term_name":"negative regulation of translation","termid":"GO:0017148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of translational fidelity","synonyms":[{"name":"down regulation of translational fidelity","type":"exact"},{"name":"down-regulation of translational fidelity","type":"exact"},{"name":"downregulation of translational fidelity","type":"exact"},{"name":"inhibition of translational fidelity","type":"narrow"}],"termid":"GO:0045902"}


id: GO:0005146
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an leukemia inhibitory factor receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"leukemia inhibitory factor receptor binding","synonyms":[{"name":"leukemia inhibitory factor","type":"narrow"},{"name":"leukemia inhibitory factor receptor ligand","type":"narrow"}],"termid":"GO:0005146"}


id: PBO:0018073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c heme lyase Cyc3 (predicted)","termid":"PBO:0018073"}


id: PBO:0113738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCA1 associated deubiquitinase 1","termid":"PBO:0113738"}


id: PATO:0000564
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000564 thickness value (obsolete PATO:0000564)","termid":"PATO:0000564"}


id: PBO:0004679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain protein Ubx4 (predicted)","termid":"PBO:0004679"}


id: PBO:0077732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tensin 1","termid":"PBO:0077732"}


id: PBO:0027873
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_cellular_response_to_UV","termid":"PBO:0027873"}


id: PATO:0001375
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A ploidy quality inhering in a bearer by virtue of the bearer's containing a single set of homologous chromosomes.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Haploid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"euploid","termid":"PATO:0001393"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haploid","termid":"PATO:0001375"}


id: GO:0005821
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Structure between the central and outer plaques of the spindle pole body.","definition_xrefs":["PMID:9215630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"spindle pole body","termid":"GO:0005816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005816"}],"interesting_parent_ids":["GO:0005816","GO:0015630","GO:0005575"],"is_obsolete":false,"name":"intermediate layer of spindle pole body","termid":"GO:0005821"}


id: MONDO:0020813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing sex cord-stromal tumor that arises from the testis. Morphologically, it is characterized by the presence of Sertoli cells forming tubules. Leydig cells are rare or absent.","definition_xrefs":["NCIT:C6522"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular sertoli cell tumor","termid":"MONDO:0020808"},{"relation_name":"is_a","term_name":"benign sertoli cell tumor","termid":"MONDO:0020809"},{"relation_name":"is_a","term_name":"benign neoplasm of testis","termid":"MONDO:0021447"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign testicular sertoli cell tumor","secondary_identifiers":["MEDGEN:231945","UMLS:C1332540"],"synonyms":[{"name":"benign sertoli cell neoplasm of testis","type":"exact"},{"name":"benign sertoli cell neoplasm of the testis","type":"exact"},{"name":"benign sertoli cell tumor of testis","type":"exact"},{"name":"benign sertoli cell tumor of the testis","type":"exact"},{"name":"benign sertoli cell tumour of testis","type":"exact"},{"name":"benign sertoli cell tumour of the testis","type":"exact"},{"name":"benign testicular sertoli cell neoplasm","type":"exact"},{"name":"benign testicular sertoli cell tumor","type":"exact"}],"termid":"MONDO:0020813","xrefs":{"Monarch":{"xref_id":"0020813"}}}


id: PBO:0086558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YLR365W is not an essential gene","termid":"PBO:0086558"}


id: GO:0060637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that increases the rate, frequency, or extent of lactation as a result of the secretion of a signal from the mammary fat and its reception by a mammary epithelial cell.","definition_xrefs":["PMID:12558599","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal-epithelial cell signaling","termid":"GO:0060638"},{"relation_name":"is_a","term_name":"positive regulation of lactation","termid":"GO:1903489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of lactation by mesenchymal-epithelial cell signaling","synonyms":[{"name":"positive regulation of lactation by mesenchymal-epithelial cell signalling","type":"exact"}],"termid":"GO:0060637"}


id: MOD:00862
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to D-alanine.","definition_xrefs":["PubMed:7287302","PubMed:7961627","ChEBI:29949","RESID:AA0191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-alanine","synonyms":[{"name":"(R)-2-aminopropanoic acid","type":"exact"},{"name":"D-alanine","type":"exact"},{"name":"MOD_RES D-alanine (Ala)","type":"exact"},{"name":"MOD_RES D-alanine (Ser)","type":"exact"}],"termid":"MOD:00862"}


id: GO:1903884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chemokine (C-C motif) ligand 20 production.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:krc","PMID:20054338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"regulates","term_name":"chemokine (C-C motif) ligand 20 production","termid":"GO:0036392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of chemokine (C-C motif) ligand 20 production","synonyms":[{"name":"regulation of C-C motif chemokine 20 production","type":"exact"},{"name":"regulation of CCL-20 production","type":"exact"},{"name":"regulation of CCL20 production","type":"exact"}],"termid":"GO:1903884"}


id: GO:0042329
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a collagen and cuticulin-based cuticle. An example of this process is found in Caenorhabditis elegans.","definition_xrefs":["GOC:mtg_sensu","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of cuticle","termid":"GO:0042302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of collagen and cuticulin-based cuticle","synonyms":[{"name":"structural constituent of cuticle","type":"broad"}],"termid":"GO:0042329"}


id: PBO:0063647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 1 pseudogene 4","termid":"PBO:0063647"}


id: GO:0005757
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that connects the inner and outer membranes of animal mitochondria and acts as a pore that can open transiently to allow free diffusion of solutes between the mitochondrial matrix and the cytosol. The pore complex is formed of the voltage-dependent anion channel (VDAC), the adenine nucleotide translocase (ANT) and cyclophilin-D (CyP-D).","definition_xrefs":["PMID:10393078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pore complex","termid":"GO:0046930"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial envelope","termid":"GO:0005740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737","GO:0005739"],"is_obsolete":false,"name":"mitochondrial permeability transition pore complex","synonyms":[{"name":"MPTP complex","type":"exact"},{"name":"PTPC","type":"broad"},{"name":"mitochondrial PT pore complex","type":"exact"}],"termid":"GO:0005757"}


id: PATO:0001218
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001218 substance_unit (obsolete PATO:0001218)","termid":"PATO:0001218"}


id: GO:0046603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of centrosome separation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of mitotic centrosome separation","termid":"GO:0046602"},{"relation_name":"negatively_regulates","term_name":"mitotic centrosome separation","termid":"GO:0007100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitotic centrosome separation","synonyms":[{"name":"down regulation of mitotic centrosome separation","type":"exact"},{"name":"down-regulation of mitotic centrosome separation","type":"exact"},{"name":"downregulation of mitotic centrosome separation","type":"exact"},{"name":"inhibition of mitotic centrosome separation","type":"narrow"}],"termid":"GO:0046603"}


id: GO:0048248
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CXCR3 chemokine receptor.","definition_xrefs":["PMID:10556837","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CXCR chemokine receptor binding","termid":"GO:0045236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"CXCR3 chemokine receptor binding","termid":"GO:0048248"}


id: MONDO:0005186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A psychologically and socially impaired state, with or without physiological changes, that develops as a result of using cocaine and which leads to compulsive behaviors to acquire the substance.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"drug dependence","termid":"MONDO:0005303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cocaine dependence","secondary_identifiers":["SCTID:31956009","ICD10CM:F14.2","DOID:9975","ICD9:304.2","icd11.foundation:1691013484","MEDGEN:154705","EFO:0002610","ICD9:304.20","NCIT:C34492","UMLS:C0600427"],"synonyms":[{"name":"cocaine addiction","type":"exact"}],"termid":"MONDO:0005186","xrefs":{"Monarch":{"xref_id":"0005186"}}}


id: _global:capable_of_positively_regulating
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"Holds between c and p if and only if c is capable of some activity a, and a positively regulates p.","direct_ancestors":[{"relation_name":"is_a","term_name":"capable_of_regulating","termid":"_global:capable_of_regulating"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capable_of_positively_regulating","secondary_identifiers":["RO:0002598"],"termid":"_global:capable_of_positively_regulating"}


id: MONDO:0008980
data:
  {"annotated_genes":["SJAG_04110"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88667],"is_not":false,"summary":null,"term":"MONDO:0008980"}]},"cv_name":"mondo","definition":"Ataxia-hypogonadism-choroidal dystrophy syndrome is a very rare autosomal recessive, slowly progressive neurodegenerative disorder characterized by the triad of cerebellar ataxia (that generally manifests at adolescence or early adulthood), chorioretinal dystrophy, which may have a later onset (up to the fifth-sixth decade) leading to variable degrees of visual impairment, and hypogonadotropic hypogonadism (delayed puberty and lack of secondary sex characteristics). Ataxia-hypogonadism-choroidal dystrophy syndrome belongs to a clinical continuum of neurodegenerative disorders along with the clinically overlapping cerebellar ataxia-hypogonadism syndrome.","definition_xrefs":["Orphanet:1180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypogonadotropic hypogonadism","termid":"MONDO:0015770"},{"relation_name":"is_a","term_name":"hereditary ataxia","termid":"MONDO:0100309"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04110":null},"genotype_count":0,"is_obsolete":false,"name":"ataxia-hypogonadism-choroidal dystrophy syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1859093","DOID:0111265","MEDGEN:347798","GARD:944","OMIM:215470","SCTID:715984007","MESH:C565850"],"synonyms":[{"name":"BNHS","type":"exact"},{"name":"Boucher-Neuhauser syndrome","type":"exact"},{"name":"Boucher-Neuhchäuser syndrome","type":"exact"},{"name":"Boucher-Neuhäuser syndrome","type":"exact"},{"name":"ataxia - hypogonadism - choroidal dystrophy","type":"related"},{"name":"chorioretinal dystrophy, spinocerebellar ataxia and hypogonadotropic hypogonadism","type":"exact"},{"name":"spinocerebellar ataxia, hypogonadotropic hypogonadism, and chorioretinal dystrophy","type":"exact"}],"termid":"MONDO:0008980","terms_by_termid":{"MONDO:0008980":null},"xrefs":{"Monarch":{"xref_id":"0008980"}}}


id: PBO:0017590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial F1-ATPase chaperone Atp11 (predicted)","termid":"PBO:0017590"}


id: PBO:0077138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tight junction associated protein 1","termid":"PBO:0077138"}


id: GO:0098928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signal transduction in which the initial step occurs in a presynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"presynaptic signal transduction","synonyms":[{"name":"presynaptic signaling pathway","type":"exact"}],"termid":"GO:0098928"}


id: PBO:0056206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member B1","termid":"PBO:0056206"}


id: GO:0007056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the spindle during a meiotic cell cycle in females. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic spindle assembly","termid":"GO:0090306"},{"relation_name":"part_of","term_name":"female meiotic nuclear division","termid":"GO:0007143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0044085","GO:0007049","GO:0000226","GO:0007010","GO:0008150","GO:0140013"],"is_obsolete":false,"name":"spindle assembly involved in female meiosis","synonyms":[{"name":"female meiotic spindle assembly","type":"related"}],"termid":"GO:0007056"}


id: GO:0015918
data:
  {"annotated_genes":["SJAG_02375","SJAG_00355","SJAG_02323","SJAG_01329","SJAG_01722","SJAG_01590","SJAG_03718","SJAG_03247","SJAG_01407","SJAG_00261"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108159,113182,118079,104432,111209,96055,110043,93295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120011"},{"annotations":[63023,73684,78741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032366"}]},"cv_name":"biological_process","definition":"The directed movement of sterols into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Sterols are steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00261":null,"SJAG_00355":null,"SJAG_01329":null,"SJAG_01407":null,"SJAG_01590":null,"SJAG_01722":null,"SJAG_02323":null,"SJAG_02375":null,"SJAG_03247":null,"SJAG_03718":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"sterol transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0015918","terms_by_termid":{"GO:0032366":null,"GO:0120011":null}}


id: GO:0000410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription regulation process in which the presence of galactose that leads to a decrease in the frequency, rate, or extent of transcription of specific genes involved in the metabolism of other carbon sources. Carbon catabolite repression is a mechanism of genetic regulation which the accumulation of catabolites of one substance in the cell represses the formation of enzymes that contribute to the catabolism of other substances.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by galactose","termid":"GO:0000409"},{"relation_name":"is_a","term_name":"carbon catabolite repression of transcription","termid":"GO:0045013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0010467","GO:0006355"],"is_obsolete":false,"name":"carbon catabolite repression of transcription by galactose","synonyms":[{"name":"down regulation of transcription by galactose","type":"exact"},{"name":"down-regulation of transcription by galactose","type":"exact"},{"name":"downregulation of transcription by galactose","type":"exact"},{"name":"inhibition of transcription by galactose","type":"narrow"}],"termid":"GO:0000410"}


id: PBO:0090438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm2-8 complex subunit Lsm6","termid":"PBO:0090438"}


id: PBO:0045714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 2","termid":"PBO:0045714"}


id: GO:0022856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + sorbitol(out) = protein histidine + sorbitol phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"},{"relation_name":"is_a","term_name":"sorbitol transmembrane transporter activity","termid":"GO:0015576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-sorbitol phosphotransferase system transporter activity","synonyms":[{"name":"sorbitol PTS transporter activity","type":"exact"}],"termid":"GO:0022856"}


id: GO:0150004
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of the dendritic spine neck where the spine arises from the dendritic shaft.","definition_xrefs":["PMID:9030614","GOC:bc","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"dendritic spine neck","termid":"GO:0044326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic spine origin","termid":"GO:0150004"}


id: PBO:0030354
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_cellular_hyperosmotic_response","termid":"PBO:0030354"}


id: PBO:0030836
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_guanine_import","termid":"PBO:0030836"}


id: PBO:0003566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER associated protein disulfide isomerase Pdi2 (predicted)","termid":"PBO:0003566"}


id: FYPO:0000196
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A sporulation phenotype in which prospore formation is abnormal. In prospore formation, each haploid nucleus becomes encapsulated by a double membrane.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation","termid":"FYPO:0000121"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly","termid":"FYPO:0000336"},{"relation_name":"part_of","term_name":"abnormal sporulation","termid":"FYPO:0000121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000121"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000121"],"is_obsolete":false,"name":"abnormal prospore formation","synonyms":[{"name":"abnormal ascospore-type prospore assembly","type":"exact"},{"name":"abnormal ascospore-type prospore formation","type":"exact"},{"name":"abnormal forespore formation","type":"exact"}],"termid":"FYPO:0000196"}


id: MONDO:0023054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Klumpke paralysis is a type of brachial palsy in newborns. Signs and symptoms include weakness and loss of movement of the arm and hand. Some babies experience drooping of the eyelid on the opposite side of the face as well. This symptom may also be referred to as Horner syndrome. Klumpke paralysis is caused by an injury to the nerves of the brachial plexus which may result from a difficult delivery. This injury can cause a stretching (neuropraxia), tearing (called avulsion when the tear is at the spine, and rupture when it is not), or scarring (neuroma) of the brachial plexus nerves. Most infants with Klumpke paralysis have the more mild form of injury (neuropraxia) and often recover within 6 months.","definition_xrefs":["GARD:0003123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"palsy","termid":"MONDO:0006496"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"klumpke's paralysis","secondary_identifiers":["GARD:3123","SCTID:83886009","NCIT:C116724","MEDGEN:124376","UMLS:C0270898"],"synonyms":[{"name":"Dejerine Klumpke Palsy","type":"related"},{"name":"Dejerine-Klumpke Palsy","type":"related"},{"name":"Dejerine-Klumpke palsy","type":"related"},{"name":"Klumpke Palsy","type":"related"},{"name":"Klumpke Paralysis","type":"related"},{"name":"Klumpke paralysis","type":"related"},{"name":"Klumpke's Palsy","type":"related"},{"name":"Klumpke's palsy","type":"related"},{"name":"Klumpke's paralysis","type":"related"},{"name":"Klumpke-DC)jerine brachial plexus injury","type":"related"},{"name":"Klumpke-DC)jerine paralysis","type":"related"},{"name":"Klumpke-Dejerine paralysis","type":"related"},{"name":"Klumpkes Palsy","type":"related"},{"name":"Lower Brachial Plexus Palsy","type":"related"},{"name":"Lower brachial plexus palsy","type":"related"},{"name":"Palsy, Dejerine-Klumpke","type":"related"},{"name":"Palsy, Klumpke's","type":"related"},{"name":"Paralysis of the Lower Brachial Plexus","type":"related"},{"name":"Paralysis, Klumpke","type":"related"},{"name":"klumpke paralysis","type":"related"},{"name":"klumpke's palsy","type":"related"},{"name":"klumpke's paralysis","type":"exact"},{"name":"klumpke-dC)jerine brachial plexus injury","type":"related"},{"name":"klumpke-dC)jerine paralysis","type":"exact"},{"name":"klumpke-dejerine paralysis","type":"related"}],"termid":"MONDO:0023054","xrefs":{"Monarch":{"xref_id":"0023054"}}}


id: MONDO:0007369
data:
  {"annotated_genes":["SJAG_04944"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87652],"is_not":false,"summary":null,"term":"MONDO:0007369"}]},"cv_name":"mondo","definition":"A form of acute hepatic porphyria characterized by the occurrence of neuro-visceral attacks and, more rarely, by the presence of cutaneous lesions.","definition_xrefs":["Orphanet:79273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatic porphyria","termid":"MONDO:0002520"},{"relation_name":"is_a","term_name":"CPOX-related hereditary coproporphyria","termid":"MONDO:0800180"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04944":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0019142"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0005066","MONDO:0004335","MONDO:0005093","MONDO:0019142"],"is_obsolete":false,"name":"hereditary coproporphyria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:7425008","UMLS:C0162531","NANDO:2201264","DOID:13269","NCIT:C84759","OMIM:121300","MedDRA:10019866","MESH:D046349","NORD:1228","GARD:6619","NANDO:1200813","MEDGEN:57931","icd11.foundation:1365918274"],"synonyms":[{"name":"CPRO deficiency","type":"related"},{"name":"Cpo deficiency","type":"related"},{"name":"Cpox deficiency","type":"related"},{"name":"Cpx deficiency","type":"related"},{"name":"HCP","type":"related"},{"name":"Harderoporphyria","type":"related"},{"name":"coproporphyria","type":"related"},{"name":"coproporphyria hereditary","type":"related"},{"name":"coproporphyria, hereditary","type":"related"},{"name":"coproporphyrinogen oxidase deficiency","type":"exact"},{"name":"hereditary coproporphyria","type":"exact"},{"name":"hereditary coproporphyria porphyria","type":"exact"},{"name":"porphyria hepatica II","type":"related"},{"name":"porphyria hepatica coproporphyria","type":"related"}],"termid":"MONDO:0007369","terms_by_termid":{"MONDO:0007369":null},"xrefs":{"Monarch":{"xref_id":"0007369"}}}


id: MONDO:0025457
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A contagious, neoplastic, pulmonary disease of sheep characterized by hyperplasia and hypertrophy of pneumocytes and epithelial cells of the lung. It is caused by jaagsiekte sheep retrovirus.","definition_xrefs":["MESH:D011648"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sheep disease","termid":"MONDO:0024985"},{"relation_name":"is_a","term_name":"adenocarcinoma, non-human animal","termid":"MONDO:0700099"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary adenomatosis, ovine","synonyms":[{"name":"Adenomatoses, Ovine pulmonary","type":"related"},{"name":"Adenomatoses, pulmonary Ovine","type":"related"},{"name":"Jaagsiekte","type":"related"},{"name":"Ovine Adenomatoses, pulmonary","type":"related"},{"name":"Ovine adenomatosis, pulmonary","type":"related"},{"name":"Ovine pulmonary Adenomatoses","type":"related"},{"name":"Ovine pulmonary adenomatosis","type":"related"},{"name":"Ovine pulmonary carcinoma","type":"related"},{"name":"Ovine pulmonary carcinomas","type":"related"},{"name":"adenomatosis, Ovine pulmonary","type":"related"},{"name":"adenomatosis, pulmonary Ovine","type":"related"},{"name":"adenomatosis, pulmonary, Ovine","type":"related"},{"name":"carcinoma, Ovine pulmonary","type":"related"},{"name":"carcinomas, Ovine pulmonary","type":"related"},{"name":"pulmonary Adenomatoses, Ovine","type":"related"},{"name":"pulmonary Ovine Adenomatoses","type":"related"},{"name":"pulmonary Ovine adenomatosis","type":"related"},{"name":"pulmonary carcinoma, Ovine","type":"related"},{"name":"pulmonary carcinomas, Ovine","type":"related"}],"termid":"MONDO:0025457","xrefs":{"Monarch":{"xref_id":"0025457"}}}


id: PBO:0066260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMX like 3","termid":"PBO:0066260"}


id: PBO:0042672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule pseudogene 6","termid":"PBO:0042672"}


id: MONDO:0012037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the CC2D1A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 3","secondary_identifiers":["UMLS:C1838023","MESH:C563929","MEDGEN:373870","GARD:22539","OMIM:608443","DOID:0081179"],"synonyms":[{"name":"CC2D1A autosomal recessive non-syndromic intellectual disability","type":"exact"},{"name":"MRT3","type":"exact"},{"name":"autosomal recessive non-syndromic intellectual disability caused by mutation in CC2D1A","type":"exact"},{"name":"intellectual disability, autosomal recessive 3","type":"exact"},{"name":"intellectual disability, autosomal recessive type 3","type":"exact"},{"name":"mental retardation, autosomal recessive 3","type":"exact"},{"name":"mental retardation, autosomal recessive type 3","type":"exact"}],"termid":"MONDO:0012037","xrefs":{"Monarch":{"xref_id":"0012037"}}}


id: PBO:0030199
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_cytochalasin_B","termid":"PBO:0030199"}


id: GO:0160171
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=28 symmetry.","definition_xrefs":["VZ:6057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=28 icosahedral capsid","termid":"GO:0160171"}


id: PBO:0084381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low-affinity cyclic AMP phosphodiesterase; controls glucose and intracellular acidification-induced cAMP signaling, target of the cAMP-protein kinase A (PKA) pathway; glucose induces transcription and inhibits translation","termid":"PBO:0084381"}


id: PBO:0030399
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_nuclear_export_during_cellular_response_to_nitrogen_starvation","termid":"PBO:0030399"}


id: PBO:0012266
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferric reductase in pombe","termid":"PBO:0012266"}


id: PR:O59672
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-binding cassette sub-family F member 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03109","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ABC transporter ATP-binding protein C29A3.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.09c","secondary_identifiers":["UniProtKB:O59672"],"synonyms":[{"name":"Spom972h-ABCF3","type":"exact"}],"termid":"PR:O59672"}


id: GO:0046533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of photoreceptor cell differentiation. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron differentiation","termid":"GO:0045665"},{"relation_name":"is_a","term_name":"regulation of photoreceptor cell differentiation","termid":"GO:0046532"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"photoreceptor cell differentiation","termid":"GO:0046530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of photoreceptor cell differentiation","secondary_identifiers":["GO:0045674"],"synonyms":[{"name":"down regulation of photoreceptor cell differentiation","type":"exact"},{"name":"down regulation of photoreceptor differentiation","type":"exact"},{"name":"down-regulation of photoreceptor cell differentiation","type":"exact"},{"name":"down-regulation of photoreceptor differentiation","type":"exact"},{"name":"downregulation of photoreceptor cell differentiation","type":"exact"},{"name":"downregulation of photoreceptor differentiation","type":"exact"},{"name":"inhibition of photoreceptor cell differentiation","type":"narrow"},{"name":"inhibition of photoreceptor differentiation","type":"narrow"},{"name":"negative regulation of photoreceptor differentiation","type":"exact"}],"termid":"GO:0046533"}


id: GO:0070003
data:
  {"annotated_genes":["SJAG_03316","SJAG_04969","SJAG_05351","SJAG_03151","SJAG_01014","SJAG_01612"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75500,80313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036374"},{"annotations":[61893,57350,76057,62385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004298"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activity","termid":"GO:0008233"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01014":null,"SJAG_01612":null,"SJAG_03151":null,"SJAG_03316":null,"SJAG_04969":null,"SJAG_05351":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016787","GO:0003674","GO:0008233"],"is_obsolete":false,"name":"threonine-type peptidase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null},"termid":"GO:0070003","terms_by_termid":{"GO:0004298":null,"GO:0036374":null}}


id: GO:1905576
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ganglioside GT1b.","definition_xrefs":["PMID:1454804","GO_REF:0000067","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"ganglioside binding","termid":"GO:0035594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0008289","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ganglioside GT1b binding","termid":"GO:1905576"}


id: MONDO:0020675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disease of the large or small intestine that is caused by inadequate blood supply.","definition_xrefs":["NCIT:C35212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"},{"relation_name":"is_a","term_name":"ischemic disease","termid":"MONDO:0005053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"ischemic bowel disorder","secondary_identifiers":["MEDGEN:412148","UMLS:C2004435"],"synonyms":[{"name":"ischaemic bowel disease","type":"exact"},{"name":"ischemic bowel disease","type":"exact"}],"termid":"MONDO:0020675","xrefs":{"Monarch":{"xref_id":"0020675"}}}


id: PBO:0117059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NELL1 antisense RNA 1","termid":"PBO:0117059"}


id: PBO:0085338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoglucomutase, minor isoform; catalyzes the conversion from glucose-1-phosphate to glucose-6-phosphate, which is a key step in hexose metabolism; PGM1 has a paralog, PGM2, that arose from the whole genome duplication","termid":"PBO:0085338"}


id: PBO:0090255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L27","termid":"PBO:0090255"}


id: SO:0000856
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that is similar or identical across more than one species.","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved","termid":"SO:0000856"}


id: PATO:0000752
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000752 mating value (obsolete PATO:0000752)","termid":"PATO:0000752"}


id: MONDO:0030912
data:
  {"annotated_genes":["SJAG_03698","SJAG_03418"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87164,87165],"is_not":false,"summary":null,"term":"MONDO:0030912"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03418":null,"SJAG_03698":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0002320"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 47","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1622196","Orphanet:502434","UMLS:C4539951","DOID:0080238","OMIM:617635","GARD:17935"],"synonyms":[{"name":"MRD47","type":"related"},{"name":"STAG1-related intellectual disability-facial dysmorphism-gastroesophageal reflux syndrome","type":"exact"},{"name":"autosomal dominant intellectual disability 47","type":"related"},{"name":"autosomal dominant mental retardation 47","type":"related"},{"name":"intellectual disability, autosomal dominant 47","type":"exact"},{"name":"mental retardation, autosomal dominant 47","type":"related"}],"termid":"MONDO:0030912","terms_by_termid":{"MONDO:0030912":null},"xrefs":{"Monarch":{"xref_id":"0030912"}}}


id: GO:0070592
data:
  {"annotated_genes":["SJAG_04483","SJAG_01835","SJAG_04659","SJAG_02278","SJAG_04462","SJAG_05285","SJAG_04236","SJAG_02222","SJAG_04668","SJAG_03057","SJAG_04184","SJAG_02916","SJAG_01290","SJAG_03123","SJAG_03587","SJAG_00218","SJAG_01028","SJAG_04771","SJAG_01288","SJAG_01453","SJAG_01787","SJAG_03705","SJAG_00424","SJAG_00610","SJAG_04666","SJAG_00876","SJAG_01255"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[74739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[75095,75267,73157,72372,80516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[72800,74742,117679,115020,76257,77603,93413,107933],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[79965,104462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[94233,89326],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[94217,119902,92582,107172,119769,69409,107743],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"},{"annotations":[104669,91254,94239,96755],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a polysaccharide destined to form part of a cell wall.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"is_a","term_name":"cell wall polysaccharide metabolic process","termid":"GO:0010383"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00424":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_01028":null,"SJAG_01255":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01453":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_02278":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0005975"],"is_obsolete":false,"name":"cell wall polysaccharide biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"cell wall polysaccharide anabolism","type":"exact"},{"name":"cell wall polysaccharide biosynthesis","type":"exact"},{"name":"cell wall polysaccharide synthesis","type":"exact"}],"termid":"GO:0070592","terms_by_termid":{"GO:0034412":null,"GO:0034413":null,"GO:0070600":null,"GO:0070610":null,"GO:0070880":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: GO:0050700
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CARD (N-terminal caspase recruitment) domain, a protein-protein interaction domain that belongs to the death domain-fold superfamily. These protein molecule families are similar in structure with each consisting of six or seven anti-parallel alpha-helices that form highly specific homophilic interactions between signaling partners. CARD exists in the N-terminal prodomains of several caspases and in apoptosis-regulatory proteins and mediates the assembly of CARD-containing proteins that participate in activation or suppression of CARD carrying members of the caspase family.","definition_xrefs":["PMID:12054670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"CARD domain binding","termid":"GO:0050700"}


id: GO:0042812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pheromones, a substance that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone catabolic process","termid":"GO:0042447"},{"relation_name":"is_a","term_name":"pheromone metabolic process","termid":"GO:0042810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"pheromone catabolic process","secondary_identifiers":["GO:0046614","GO:0007327"],"synonyms":[{"name":"pheromone breakdown","type":"exact"},{"name":"pheromone catabolism","type":"exact"},{"name":"pheromone degradation","type":"exact"}],"termid":"GO:0042812"}


id: MONDO:1011769
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysplasia epiphysealis hememelica, non-human animal","secondary_identifiers":["OMIA:001361"],"termid":"MONDO:1011769","xrefs":{"Monarch":{"xref_id":"1011769"}}}


id: GO:1901568
data:
  {"annotated_genes":["SJAG_03909","SJAG_03471","SJAG_04007"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"},{"annotations":[79020,80617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035336"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving fatty acid derivative.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid metabolic process","termid":"GO:0006629"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03471":null,"SJAG_03909":null,"SJAG_04007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"fatty acid derivative metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"fatty acid derivative metabolism","type":"exact"}],"termid":"GO:1901568","terms_by_termid":{"GO:0035336":null,"GO:0035338":null}}


id: PBO:0073754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 9","termid":"PBO:0073754"}


id: PBO:0081770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 702, pseudogene","termid":"PBO:0081770"}


id: PBO:0083655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endonuclease I-SceII; encoded by a mobile group I intron within the mitochondrial COX1 gene; intron is normally spliced by the BI4p maturase but AI4p can mutate to acquire the same maturase activity","termid":"PBO:0083655"}


id: GO:0008320
data:
  {"annotated_genes":["SJAG_05259","SJAG_02208","SJAG_03560","SJAG_02077","SJAG_02330","SJAG_04996","SJAG_01879","SJAG_01640","SJAG_04218","SJAG_00959","SJAG_03415","SJAG_03358","SJAG_03515","SJAG_03502"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69343,74955,75173,75364,75717,76741,80494,80713,80893,108005],"is_not":false,"summary":null,"term":"GO:0008320"},{"annotations":[109426,107019,109403,105106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015450"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a protein from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule transmembrane transporter activity","termid":"GO:0022884"},{"relation_name":"is_a","term_name":"protein transporter activity","termid":"GO:0140318"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00959":null,"SJAG_01640":null,"SJAG_01879":null,"SJAG_02077":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_04218":null,"SJAG_04996":null,"SJAG_05259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140318"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0140318","GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"protein transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1268022","Reactome:R-HSA-5244428","Reactome:R-HSA-5336420","Reactome:R-HSA-5210943","Reactome:R-HSA-184269","Reactome:R-HSA-5205661","Reactome:R-HSA-5228406","Reactome:R-HSA-5244404","GO:0015463","Reactome:R-HSA-5210947","Reactome:R-HSA-5244506","Reactome:R-HSA-5246514","Reactome:R-HSA-5250884","Reactome:R-HSA-9698930","GO:0015266","Reactome:R-HSA-3149434","Reactome:R-HSA-1299475","Reactome:R-HSA-5250616","Reactome:R-HSA-9698933","Reactome:R-HSA-9636375","Reactome:R-HSA-5229111","Reactome:R-HSA-5250972"],"synonyms":[{"name":"protein channel activity","type":"related"}],"termid":"GO:0008320","terms_by_termid":{"GO:0008320":null,"GO:0015450":null}}


id: PBO:0058765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6889","termid":"PBO:0058765"}


id: PBO:0066202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 17 pseudogene 3","termid":"PBO:0066202"}


id: MONDO:0500000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by episodes of swelling under the skin (angioedema) and an elevated number of the white blood cells known as eosinophils (eosinophilia). During these episodes, symptoms of hives (urticaria), fever, swelling, weight gain and eosinophilia may occur. Symptoms usually appear every 3-4 weeks and resolve on their own within several days. Other cells may be elevated during the episodes, such as neutrophils and lymphocytes. Although the syndrome is often considered a subtype of the idiopathic hypereosinophilic syndromes, it does not typically have organ involvement or lead to other health concerns.","definition_xrefs":["GARD:0013029","PMID:25527564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypereosinophilic syndrome","termid":"MONDO:0015691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005267","MONDO:0005570"],"is_obsolete":false,"name":"episodic angioedema with eosinophilia","secondary_identifiers":["UMLS:C1304198","GARD:13029","icd11.foundation:1511563398","MEDGEN:725561"],"synonyms":[{"name":"EAE","type":"exact"},{"name":"Gleich syndrome","type":"exact"},{"name":"Gleich's syndrome","type":"exact"}],"termid":"MONDO:0500000","xrefs":{"Monarch":{"xref_id":"0500000"}}}


id: PBO:0076472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TANK antisense RNA 1","termid":"PBO:0076472"}


id: PBO:0066187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 10","termid":"PBO:0066187"}


id: PBO:0061704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUS1 pseudogene 4","termid":"PBO:0061704"}


id: PBO:0029965
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_regulation_during_cellular_response_to_hydroxyurea","termid":"PBO:0029965"}


id: PBO:0005339
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.4.10","termid":"PBO:0005339"}


id: PBO:0091244
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kcat/KM 2.1x10^4 min-1 M-1","termid":"PBO:0091244"}


id: PBO:0075571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindlin family member 2A","termid":"PBO:0075571"}


id: PBO:0114501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Master meiotic regulator active only during meiotic events; activates transcription of early meiotic genes through interaction with Ume6p; regulator of meiotic commitment; phosphorylated by Rim11p; degraded by the 26S proteasome following phosphorylation by Ime2p; transcription is negatively regulated in cis by the IRT1 long noncoding antisense RNA","termid":"PBO:0114501"}


id: PBO:0042919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFTR pseudogene 2","termid":"PBO:0042919"}


id: MONDO:0012982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Episodic ataxia type 6 (EA6) is an exceedingly rare form of hereditary episodic ataxia with varying degrees of ataxia and associated findings including slurred speech, headache, confusion and hemiplegia.","definition_xrefs":["Orphanet:209967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary episodic ataxia","termid":"MONDO:0016227"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid transport","termid":"MONDO:0019216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"episodic ataxia type 6","secondary_identifiers":["OMIM:612656","MEDGEN:390739","icd11.foundation:1493336901","DOID:0050994","GARD:17107","MESH:C567207","UMLS:C2675211","SCTID:718753002"],"synonyms":[{"name":"EA6","type":"related"},{"name":"SLC1A3 hereditary episodic ataxia","type":"exact"},{"name":"episodic ataxia type 6","type":"exact"},{"name":"episodic ataxia, type 6","type":"related"},{"name":"hereditary episodic ataxia caused by mutation in SLC1A3","type":"exact"}],"termid":"MONDO:0012982","xrefs":{"Monarch":{"xref_id":"0012982"}}}


id: PBO:0083566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified ORF DNF2/YDR093W","termid":"PBO:0083566"}


id: PBO:0089107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-CoA ligase alpha subunit","termid":"PBO:0089107"}


id: MONDO:0017954
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pyogenic autoinflammatory syndrome (obsolete MONDO:0017954)","secondary_identifiers":["Orphanet:324927"],"termid":"MONDO:0017954","xrefs":{"Monarch":{"xref_id":"0017954"}}}


id: PBO:0091733
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously thought to be a ribosomal protein","termid":"PBO:0091733"}


id: GO:0060887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the epidermis of the limb over time, from its formation to the mature structure. The limb epidermis is the outer epithelial layer of the limb, it is a complex stratified squamous epithelium.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin epidermis development","termid":"GO:0098773"},{"relation_name":"part_of","term_name":"limb development","termid":"GO:0060173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"limb epidermis development","termid":"GO:0060887"}


id: GO:0031323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways by which individual cells transform chemical substances.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cellular metabolic process (obsolete GO:0031323)","synonyms":[{"name":"regulation of cellular metabolism","type":"exact"}],"termid":"GO:0031323"}


id: PBO:0083008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Daughter cell-specific secreted protein with similarity to glucanases; degrades cell wall from the daughter side causing daughter to separate from mother; localizes in birth scars; expression is repressed by cAMP","termid":"PBO:0083008"}


id: MONDO:0015341
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital panfollicular nevus is a rare, benign, skin tumor disorder characterized by the presence of congenital, large (few centimeters), elevated, well-circumscribed, pink-tan, multinodular, non-ulcerative, bosselated-surface skin lesions located on the neck, scalp or hand and which enlarge with time. Histologically, hamartomatous proliferation containing irregularly arranged, malformed hair follicles in various stages of development, surrounded by fibrous tissue and densely distributed within the dermis is observed.","definition_xrefs":["Orphanet:139414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"congenital panfollicular nevus","secondary_identifiers":["GARD:19912","HP:0025471","UMLS:C4476799","MEDGEN:1381094"],"synonyms":[{"name":"congenital panfollicular nevus","type":"exact"},{"name":"congenital panfollicular nevus (disease)","type":"exact"}],"termid":"MONDO:0015341","xrefs":{"Monarch":{"xref_id":"0015341"}}}


id: GO:0098942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling from postsynapse to presynapse, across the synaptic cleft, mediated by trans-synaptic protein complex.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde trans-synaptic signaling","termid":"GO:0098917"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by trans-synaptic complex","termid":"GO:0099545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"retrograde trans-synaptic signaling by trans-synaptic protein complex","termid":"GO:0098942"}


id: MONDO:0000497
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of uterine musculature associated with pus in the uterine cavity.","direct_ancestors":[{"relation_name":"is_a","term_name":"uterine disorder","termid":"MONDO:0002654"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyometritis","secondary_identifiers":["NCIT:C121207","SCTID:88981003","UMLS:C0034215","MEDGEN:18784","DOID:0050862","MESH:D055112"],"synonyms":[{"name":"inflammation of myometrium","type":"exact"},{"name":"myometrium inflammation","type":"exact"},{"name":"pyometra","type":"exact"}],"termid":"MONDO:0000497","xrefs":{"Monarch":{"xref_id":"0000497"}}}


id: GO:0043387
data:
  {"annotated_genes":["SJAG_01869"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93630],"is_not":false,"summary":null,"term":"GO:0043387"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a mycotoxin, any poisonous substance produced by a fungus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin catabolic process","termid":"GO:0009407"},{"relation_name":"is_a","term_name":"mycotoxin metabolic process","termid":"GO:0043385"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01869":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0098754","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"mycotoxin catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mycotoxin breakdown","type":"exact"},{"name":"mycotoxin catabolism","type":"exact"},{"name":"mycotoxin degradation","type":"exact"}],"termid":"GO:0043387","terms_by_termid":{"GO:0043387":null}}


id: MONDO:0001004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pneumoconiosis caused by exposure to slate dust.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pneumoconiosis","termid":"MONDO:0015926"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"slate pneumoconiosis","secondary_identifiers":["SCTID:1259003","NCIT:C35397","UMLS:C0340186","ICD9:502","MEDGEN:83300","DOID:10330"],"synonyms":[{"name":"Schistosis","type":"exact"}],"termid":"MONDO:0001004","xrefs":{"Monarch":{"xref_id":"0001004"}}}


id: PBO:0078668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon TTT) 3-3","termid":"PBO:0078668"}


id: PBO:0047294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acyl-CoA reductase 2 pseudogene 1","termid":"PBO:0047294"}


id: MONDO:0004488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenomyoma that arises from the cervix and is characterized by the presence of a glandular component exhibiting architectural complexity.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical adenomyoma","termid":"MONDO:0003238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical atypical polypoid adenomyoma","secondary_identifiers":["NCIT:C40234","UMLS:C1516409","DOID:8179","MEDGEN:273123"],"termid":"MONDO:0004488","xrefs":{"Monarch":{"xref_id":"0004488"}}}


id: MONDO:0007962
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition in which a finger or toe is larger than normal size secondary to excessive growth of the anatomical structures or abnormal accumulation of substances.","definition_xrefs":["NCIT:C48900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megalodactyly","secondary_identifiers":["SCTID:48449000","UMLS:C0265552","OMIM:155500","MESH:C562546","MEDGEN:78564"],"synonyms":[{"name":"Megalodactyly","type":"exact"},{"name":"macrodactyly","type":"related"},{"name":"macrodactyly, somatic, (3), cerebral cavernous malformations 4, somatic","type":"exact"}],"termid":"MONDO:0007962","xrefs":{"Monarch":{"xref_id":"0007962"}}}


id: PBO:0073685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sirtuin 7","termid":"PBO:0073685"}


id: MONDO:0011568
data:
  {"annotated_genes":["SJAG_05182","SJAG_04295","SJAG_05175","SJAG_04706","SJAG_02139"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87286,87287,87288,87289,87290],"is_not":false,"summary":null,"term":"MONDO:0011568"}]},"cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the SLC17A8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02139":null,"SJAG_04295":null,"SJAG_04706":null,"SJAG_05175":null,"SJAG_05182":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 25","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C565319","UMLS:C1854158","GARD:18112","MEDGEN:344221","DOID:0110555","OMIM:605583"],"synonyms":[{"name":"DFNA25","type":"narrow"},{"name":"SLC17A8 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 25","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 25","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in SLC17A8","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 25","type":"narrow"},{"name":"deafness, autosomal dominant 25","type":"narrow"},{"name":"deafness, autosomal dominant type 25","type":"narrow"}],"termid":"MONDO:0011568","terms_by_termid":{"MONDO:0011568":null},"xrefs":{"Monarch":{"xref_id":"0011568"}}}


id: PBO:0113021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of fatty acid synthetase; complex catalyzes the synthesis of long-chain saturated fatty acids; contains acetyltransacylase, dehydratase, enoyl reductase, malonyl transacylase, and palmitoyl transacylase activities; specific target of the broad-spectrum antifungal NPD6433","termid":"PBO:0113021"}


id: GO:0044412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of an organism, or the progression of an organism from an initial condition to a later condition, occurring within the cells or tissues of the host organism. This may (but not necessarily) include a filamentous growth form, and also can include secretion of proteases and lipases to break down host tissue. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete growth or development of symbiont in host (obsolete GO:0044412)","synonyms":[{"name":"growth or development of organism within host","type":"exact"},{"name":"growth or development of symbiont in host","type":"exact"},{"name":"growth or development of symbiont within host","type":"exact"},{"name":"invasive growth","type":"broad"}],"termid":"GO:0044412"}


id: PBO:0015231
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by H. sapiens PSMD14","termid":"PBO:0015231"}


id: PBO:0089294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPOTS complex subunit, serine palmitoyltransferase activator Tsc3","termid":"PBO:0089294"}


id: FYPO:0001165
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell that is exposed to anaerobic conditions fails to grow upon being returned to aerobic conditions, and eventually dies.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable cell","termid":"FYPO:0000049"},{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"inviable cell following anaerobic growth","synonyms":[{"name":"inviable following anaerobic vegetative growth","type":"exact"},{"name":"lethal; cell following anaerobic growth","type":"exact"}],"termid":"FYPO:0001165"}


id: PATO:0001674
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concentration quality inhering in a bearer by virtue of the bearer's catalytic activity divided by the volume of the system.","definition_xrefs":["IUPAC:IUPAC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concentration of","termid":"PATO:0000033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catalytic (activity) concentration","termid":"PATO:0001674"}


id: PBO:0047695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLVCR heme transporter 2","termid":"PBO:0047695"}


id: PBO:0090217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim50","termid":"PBO:0090217"}


id: GO:0010589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process within a leaf by which specific areas of cell differentiation are determined along a proximal/distal axis.","definition_xrefs":["PMID:18398054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal/distal pattern formation","termid":"GO:0009954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leaf proximal/distal pattern formation","termid":"GO:0010589"}


id: SO:0001049
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An island that contains genes for integration/excision and the gene and site for the initiation of intercellular transfer by conjugation. It can be complemented for transfer by a conjugative transposon.","definition_xrefs":["Phigo:ariane"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genomic_island","termid":"SO:0000772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defective_conjugative_transposon","synonyms":[{"name":"defective conjugative transposon","type":"exact"}],"termid":"SO:0001049"}


id: FYPO:0002128
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plasma membrane is abolished, and the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"abolished protein localization to plasma membrane during vegetative growth","termid":"FYPO:0002126"},{"relation_name":"is_a","term_name":"abolished protein localization to cell periphery during vegetative growth","termid":"FYPO:0005571"},{"relation_name":"is_a","term_name":"abolished protein localization to membrane during vegetative growth","termid":"FYPO:0005757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to plasma membrane, with protein mislocalized to cytoplasm, during vegetative growth","synonyms":[{"name":"abolished protein localisation to plasma membrane, with protein mislocalised to cytoplasm, during vegetative growth","type":"exact"},{"name":"abolished protein localization in plasma membrane, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"abolished protein localization to cell membrane, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"abolished protein localization to plasma membrane, with protein mislocalized to cytoplasm during mitotic cell cycle","type":"related"},{"name":"protein localization to plasma membrane abolished, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"}],"termid":"FYPO:0002128"}


id: FYPO:0006526
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the second meiotic nuclear division is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis","termid":"FYPO:0000051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal meiosis II","synonyms":[{"name":"abnormal second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0006526"}


id: GO:0072226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric long descending thin limb bend over time, from its formation to the mature structure. The metanephric long descending thin limb bend is a part of the descending thin limb of a long nephron that lies beyond the prebend segment in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long descending thin limb bend development","termid":"GO:0072065"},{"relation_name":"part_of","term_name":"metanephric descending thin limb development","termid":"GO:0072220"},{"relation_name":"part_of","term_name":"metanephric long descending thin limb development","termid":"GO:0072269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric long descending thin limb bend development","termid":"GO:0072226"}


id: MONDO:0010327
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, life-threatening neurometabolic disease characterized by a progressive neurodegenerative course, epilepsy, retinopathy and progressive cardiomyopathy.","definition_xrefs":["Orphanet:391417"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"inborn mitochondrial metabolism disorder","termid":"MONDO:0004069"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"HSD10 mitochondrial disease","secondary_identifiers":["UMLS:C3266731","MEDGEN:781653","MESH:C564560","SCTID:791000124107","OMIM:300438","MESH:C536080","GARD:10716","DOID:0060810","OMIM:300220"],"synonyms":[{"name":"17 beta-hydroxysteroid dehydrogenase type 10 deficiency","type":"related"},{"name":"17-beta-hydroxysteroid dehydrogenase 10 deficiency","type":"exact"},{"name":"17-beta-hydroxysteroid dehydrogenase X deficiency","type":"exact"},{"name":"2-methyl-3-hydroxybutyric aciduria","type":"exact"},{"name":"2-methyl-3-hydroxybutyryl-CoA dehydrogenase deficiency","type":"exact"},{"name":"2M3HBA","type":"related"},{"name":"3-hydroxy-2-methylbutyryl-CoA dehydrogenase deficiency","type":"related"},{"name":"3-hydroxyacyl-CoA dehydrogenase 2 deficiency","type":"exact"},{"name":"3H2MBD deficiency","type":"related"},{"name":"HSD10 deficiency","type":"exact"},{"name":"HSD10 deficiency, atypical type","type":"narrow"},{"name":"HSD10 mitochondrial disease","type":"exact"},{"name":"HSD10 mitochondrial disease, X-linked dominant","type":"exact"},{"name":"HSD10MD","type":"exact"},{"name":"HSD17B10 deficiency","type":"exact"},{"name":"MHBD deficiency","type":"exact"},{"name":"MRXS10","type":"exact"},{"name":"X-linked intellectual disability-choreoathetosis-abnormal behavior syndrome","type":"narrow"},{"name":"X-linked intellectual disability-choreoathetosis-abnormal behaviour syndrome","type":"narrow"},{"name":"chorioathetosis with mental retardation and abnormal behavior","type":"exact"},{"name":"chorioathetosis with mental retardation and abnormal behaviour","type":"exact"},{"name":"hydroxyacyl-CoA dehydrogenase II deficiency","type":"related"},{"name":"mental retardation with chorioathetosis and abnormal behavior","type":"exact"},{"name":"mental retardation with chorioathetosis and abnormal behaviour","type":"exact"},{"name":"mental retardation, X-linked syndromic 10","type":"exact"},{"name":"mental retardation, X-linked, syndromic 10","type":"exact"},{"name":"mental retardation, X-linked, syndromic type 10","type":"exact"},{"name":"syndromic X-linked intellectual disability type 10","type":"narrow"}],"termid":"MONDO:0010327","xrefs":{"Monarch":{"xref_id":"0010327"}}}


id: GO:0106276
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: bilirubin IXalpha + NAD+ = biliverdin IXalpha + NADH+ H+.","definition_xrefs":["RHEA:15797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biliverdin reductase [NAD(P)H] activity","termid":"GO:0004074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"biliberdin reductase (NADH) activity","synonyms":[{"name":"biliberdin reductase (NAD+) activity","type":"exact"}],"termid":"GO:0106276"}


id: PBO:0062367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily A member 2 pseudogene","termid":"PBO:0062367"}


id: PBO:0060959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFKB inhibitor like 1","termid":"PBO:0060959"}


id: GO:0010343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Programmed cell death induced by singlet oxygen. Programmed cell death is the cell death resulting from activation of endogenous cellular processes.","definition_xrefs":["PMID:17075038","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death in response to reactive oxygen species","termid":"GO:0097468"},{"relation_name":"part_of","term_name":"cellular response to singlet oxygen","termid":"GO:0071452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"singlet oxygen-mediated programmed cell death","synonyms":[{"name":"light-dependent programmed cell death","type":"broad"},{"name":"programmed cell death in response to singlet oxygen","type":"exact"}],"termid":"GO:0010343"}


id: GO:1902155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to G1 DNA damage checkpoint signaling.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to DNA damage checkpoint signaling","termid":"GO:1902153"},{"relation_name":"regulates","term_name":"response to G1 DNA damage checkpoint signaling","termid":"GO:0072432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to G1 DNA damage checkpoint signaling","synonyms":[{"name":"regulation of mitotic cell cycle G1/S transition DNA damage checkpoint effector process","type":"exact"},{"name":"regulation of response to mitotic cell cycle G1/S transition DNA damage checkpoint signaling","type":"exact"},{"name":"regulation of response to signal involved in mitotic cell cycle G1/S transition DNA damage checkpoint","type":"exact"}],"termid":"GO:1902155"}


id: MONDO:0859363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia 79A, autosomal dominant, with ataxia","secondary_identifiers":["OMIM:620221","UMLS:C5774300","DOID:0070455","MEDGEN:1824073"],"termid":"MONDO:0859363","xrefs":{"Monarch":{"xref_id":"0859363"}}}


id: GO:0051782
data:
  {"annotated_genes":["SJAG_04551","SJAG_01787","SJAG_03353","SJAG_06270","SJAG_01386","SJAG_02514","SJAG_04455","SJAG_00229","SJAG_00883","SJAG_02392","SJAG_03592","SJAG_02169","SJAG_03681","SJAG_03508","SJAG_02795","SJAG_03048","SJAG_01464","SJAG_01790","SJAG_00526","SJAG_00845","SJAG_02838","SJAG_02592","SJAG_04943"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000432"},{"annotations":[112614,96181,92579,105514,104187,97668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[105515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903472"},{"annotations":[94655,101483,108931,103961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902413"},{"annotations":[104192],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"},{"annotations":[103090,109065,106871,94741,93549,112015,92538,101405,108932,117763,94656,97453,74647,95269,109375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cell division.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cell division","termid":"GO:0051302"},{"relation_name":"negatively_regulates","term_name":"cell division","termid":"GO:0051301"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00526":null,"SJAG_00845":null,"SJAG_00883":null,"SJAG_01386":null,"SJAG_01464":null,"SJAG_01787":null,"SJAG_01790":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_02514":null,"SJAG_02592":null,"SJAG_02795":null,"SJAG_02838":null,"SJAG_03048":null,"SJAG_03353":null,"SJAG_03508":null,"SJAG_03592":null,"SJAG_03681":null,"SJAG_04455":null,"SJAG_04551":null,"SJAG_04943":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell division","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of cell division","type":"exact"},{"name":"down-regulation of cell division","type":"exact"},{"name":"downregulation of cell division","type":"exact"},{"name":"inhibition of cell division","type":"narrow"}],"termid":"GO:0051782","terms_by_termid":{"GO:0031030":null,"GO:1902413":null,"GO:1903472":null,"GO:1903500":null,"GO:1905757":null,"GO:2000432":null}}


id: PBO:0071975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 3","termid":"PBO:0071975"}


id: MONDO:0045043
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that involves the broad ligament of uterus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligament disorder","termid":"MONDO:0045044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disorder of uterine broad ligament","secondary_identifiers":["UMLS:C0404479","SCTID:237062006","MEDGEN:589074"],"synonyms":[{"name":"broad ligament of uterus disease","type":"exact"},{"name":"broad ligament of uterus disease or disorder","type":"exact"},{"name":"disease of broad ligament of uterus","type":"exact"},{"name":"disease or disorder of broad ligament of uterus","type":"exact"},{"name":"disorder of broad ligament","type":"exact"},{"name":"disorder of broad ligament of uterus","type":"exact"}],"termid":"MONDO:0045043","xrefs":{"Monarch":{"xref_id":"0045043"}}}


id: MONDO:0021659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant epithelial neoplasm composed of a mixture of neuroendocrine cells with morphologic and immunohistochemical characteristics of carcinoid tumor and malignant glandular cells.","definition_xrefs":["NCIT:C4139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"combined carcinoid and adenocarcinoma","secondary_identifiers":["ICDO:8244/3","MESH:C538230","MEDGEN:83124","ICDO:8245/3","UMLS:C0334302"],"synonyms":[{"name":"adenocarcinoid neoplasm","type":"exact"},{"name":"adenocarcinoid tumor","type":"exact"},{"name":"adenocarcinoid tumour","type":"exact"},{"name":"combined carcinoid and adenocarcinoma","type":"exact"},{"name":"combined carcinoid neoplasm and adenocarcinoma","type":"exact"},{"name":"combined carcinoid tumor and adenocarcinoma","type":"exact"},{"name":"combined carcinoid tumour and adenocarcinoma","type":"exact"},{"name":"composite carcinoid","type":"exact"},{"name":"composite carcinoid neoplasm","type":"exact"},{"name":"composite carcinoid tumor","type":"exact"},{"name":"composite carcinoid tumour","type":"exact"},{"name":"mixed carcinoid neoplasm","type":"exact"},{"name":"mixed carcinoid tumor","type":"exact"},{"name":"mixed carcinoid tumour","type":"exact"}],"termid":"MONDO:0021659","xrefs":{"Monarch":{"xref_id":"0021659"}}}


id: GO:0032327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the W-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear tungsten ion (W) coordinated by one or two molybdopterin ligands.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdopterin cofactor catabolic process","termid":"GO:0032325"},{"relation_name":"is_a","term_name":"W-molybdopterin cofactor metabolic process","termid":"GO:0042046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"W-molybdopterin cofactor catabolic process","synonyms":[{"name":"Moco catabolic process","type":"broad"},{"name":"Moco catabolism","type":"broad"},{"name":"W-molybdopterin cofactor breakdown","type":"exact"},{"name":"W-molybdopterin cofactor catabolism","type":"exact"},{"name":"W-molybdopterin cofactor degradation","type":"exact"}],"termid":"GO:0032327"}


id: GO:0097239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter in response to a methylglyoxal stimulus.","definition_xrefs":["PMID:15773992","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to methylglyoxal (obsolete GO:0097239)","termid":"GO:0097239"}


id: GO:0046167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycerol-3-phosphate, a phosphoric monoester of glycerol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol-3-phosphate metabolic process","termid":"GO:0006072"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycerol-3-phosphate biosynthetic process","synonyms":[{"name":"glycerol-3-phosphate anabolism","type":"exact"},{"name":"glycerol-3-phosphate biosynthesis","type":"exact"},{"name":"glycerol-3-phosphate formation","type":"exact"},{"name":"glycerol-3-phosphate synthesis","type":"exact"}],"termid":"GO:0046167"}


id: PBO:0054864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2278","termid":"PBO:0054864"}


id: MONDO:0013011
data:
  {"annotated_genes":["SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87121],"is_not":false,"summary":null,"term":"MONDO:0013011"}]},"cv_name":"mondo","definition":"Any atrial heart septal defect in which the cause of the disease is a mutation in the ACTC1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septal defect","termid":"MONDO:0006664"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial septal defect 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:412580","UMLS:C2748552","MESH:C567561","OMIM:612794","DOID:0110110"],"synonyms":[{"name":"ACTC1 atrial heart septal defect","type":"exact"},{"name":"ASD5","type":"exact"},{"name":"atrial heart septal defect caused by mutation in ACTC1","type":"exact"},{"name":"atrial heart septal defect type 5","type":"exact"},{"name":"atrial septal defect 5","type":"exact"},{"name":"atrial septal defect type 5","type":"exact"}],"termid":"MONDO:0013011","terms_by_termid":{"MONDO:0013011":null},"xrefs":{"Monarch":{"xref_id":"0013011"}}}


id: PBO:0028110
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_bis(5'-adenosyl)-hexaphosphatase_activity","termid":"PBO:0028110"}


id: MONDO:0017419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital malformation characterized by the complete absence of all limbs.","definition_xrefs":["NCIT:C34370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"non-syndromic amelia","secondary_identifiers":["Orphanet:294925","SCTID:62588002","HP:0009827","UMLS:C0002447","GARD:21179","MEDGEN:8014","MedDRA:10001926"],"synonyms":[{"name":"amelia","type":"broad"},{"name":"isolated amelia","type":"related"},{"name":"nonsyndromic amelia","type":"exact"}],"termid":"MONDO:0017419","xrefs":{"Monarch":{"xref_id":"0017419"}}}


id: GO:0002160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The maintenance of a desmosome. A desmosome is a patch-like intercellular junctions found in vertebrate tissues, consisting of parallel zones of two cell membranes, separated by an interspace of 25-35 nm, and having dense fibrillar plaques in the subjacent cytoplasm.","definition_xrefs":["ISBN:0198506732","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"desmosome organization","termid":"GO:0002934"},{"relation_name":"is_a","term_name":"cell-cell junction maintenance","termid":"GO:0045217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"desmosome maintenance","termid":"GO:0002160"}


id: GO:1990917
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The cytoplasm of an ovum.","definition_xrefs":["PMID:19022436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"ooplasm","termid":"GO:1990917"}


id: FYPO:0006414
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more histone RNAs measured in a cell is higher than normal (i.e. lower than observed in wild-type cells) during interphase of the mitotic cell cycle. Histone RNAs are transcribed from genes encoding histones.","definition_xrefs":["PMID:17452352","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of histone gene mRNA during vegetative growth","termid":"FYPO:0006413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased level of histone gene mRNA during mitotic interphase","synonyms":[{"name":"increased histone gene mRNA accumulation during mitotic interphase","type":"related"},{"name":"increased level of histone gene RNA during mitotic interphase","type":"exact"},{"name":"increased level of histone gene mRNA during interphase of mitotic cell cycle","type":"exact"},{"name":"increased level of histone gene transcripts during mitotic interphase","type":"exact"}],"termid":"FYPO:0006414"}


id: PBO:0058807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7849","termid":"PBO:0058807"}


id: GO:0071863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that modulates the frequency, rate or extent of cell proliferation in the bone marrow.","definition_xrefs":["GOC:yaf","PMID:17063141","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"cell proliferation in bone marrow","termid":"GO:0071838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell proliferation in bone marrow","synonyms":[{"name":"regulation of bone marrow cell proliferation","type":"exact"}],"termid":"GO:0071863"}


id: PBO:0067341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 435, pseudogene","termid":"PBO:0067341"}


id: PR:O94740
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An hsp90 co-chaperone Cdc37 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12800:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hsp90 co-chaperone Cdc37 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC9B6.10","secondary_identifiers":["UniProtKB:O94740"],"synonyms":[{"name":"SPBC9B6.10","type":"related"},{"name":"Spom972h-CDC37","type":"exact"},{"name":"cell division control protein 37 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"hsp90 chaperone protein kinase-targeting subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94740"}


id: GO:0031786
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1B melatonin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melatonin receptor binding","termid":"GO:0031784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"type 1B melatonin receptor binding","synonyms":[{"name":"type 1B melatonin receptor ligand","type":"narrow"}],"termid":"GO:0031786"}


id: MONDO:0007801
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypoplasia of teeth roots (obsolete MONDO:0007801)","secondary_identifiers":["MESH:C564144","OMIM:146400"],"synonyms":[{"name":"hypoplasia of teeth roots","type":"related"}],"termid":"MONDO:0007801","xrefs":{"Monarch":{"xref_id":"0007801"}}}


id: GO:0002597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antigen processing and presentation of peptide antigen via MHC class Ib.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation of peptide antigen","termid":"GO:0002585"},{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation via MHC class Ib","termid":"GO:0002594"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide antigen via MHC class Ib","termid":"GO:0002595"},{"relation_name":"positively_regulates","term_name":"antigen processing and presentation of peptide antigen via MHC class Ib","termid":"GO:0002428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antigen processing and presentation of peptide antigen via MHC class Ib","synonyms":[{"name":"activation of antigen processing and presentation of peptide antigen via MHC class Ib","type":"narrow"},{"name":"positive regulation of peptide antigen processing and presentation via MHC class Ib","type":"exact"},{"name":"stimulation of antigen processing and presentation of peptide antigen via MHC class Ib","type":"narrow"},{"name":"up regulation of antigen processing and presentation of peptide antigen via MHC class Ib","type":"exact"},{"name":"up-regulation of antigen processing and presentation of peptide antigen via MHC class Ib","type":"exact"},{"name":"upregulation of antigen processing and presentation of peptide antigen via MHC class Ib","type":"exact"}],"termid":"GO:0002597"}


id: FYPO:0002097
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is decreased during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity","termid":"FYPO:0001382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"decreased protein kinase activity during cellular response to hydroxyurea","synonyms":[{"name":"decreased protein kinase activity during cellular response to HU","type":"exact"},{"name":"reduced protein kinase activity during cellular response to HU","type":"exact"},{"name":"reduced protein kinase activity during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0002097"}


id: GO:0035449
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of a plastid thylakoid membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:bf","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of thylakoid membrane","termid":"GO:0035448"},{"relation_name":"is_a","term_name":"extrinsic component of plastid membrane","termid":"GO:0035452"},{"relation_name":"part_of","term_name":"plastid thylakoid membrane","termid":"GO:0055035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of plastid thylakoid membrane","synonyms":[{"name":"extrinsic to plastid thylakoid membrane","type":"narrow"},{"name":"peripheral to plastid thylakoid membrane","type":"exact"}],"termid":"GO:0035449"}


id: PR:O74981
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug112 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 112 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.02","synonyms":[{"name":"Spom972h-mug112","type":"exact"}],"termid":"PR:O74981"}


id: PATO:0000796
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000796 regeneration value (obsolete PATO:0000796)","termid":"PATO:0000796"}


id: MONDO:0024248
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A name originally applied to a group of skin diseases characterized by the formation of fine, branny scales, but now used only with a modifier. (Dorland, 27th ed)","definition_xrefs":["MESH:D010915"],"gene_count":0,"genotype_count":0,"name":"obsolete pityriasis (obsolete MONDO:0024248)","secondary_identifiers":["SCTID:34630004","ICD9:696.5"],"synonyms":[{"name":"Pityriases","type":"related"}],"termid":"MONDO:0024248","xrefs":{"Monarch":{"xref_id":"0024248"}}}


id: PR:Q9UT12
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ofd2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P8A3.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP8A3.02c","synonyms":[{"name":"Spom972h-ofd2","type":"exact"}],"termid":"PR:Q9UT12"}


id: MOD:01673
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an N-acetylaminohexose group through a glycosidic bond.","definition_xrefs":["Unimod:43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylhexosaminylated residue","termid":"MOD:00436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N-acetylaminohexosylated residue","synonyms":[{"name":"HexNAc","type":"related"},{"name":"HexNAcRes","type":"exact"},{"name":"N-Acetylhexosamine","type":"related"}],"termid":"MOD:01673"}


id: GO:0071385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucocorticoid stimulus. Glucocorticoids are hormonal C21 corticosteroids synthesized from cholesterol with the ability to bind with the cortisol receptor and trigger similar effects. Glucocorticoids act primarily on carbohydrate and protein metabolism, and have anti-inflammatory effects.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to glucocorticoid","termid":"GO:0051384"},{"relation_name":"is_a","term_name":"cellular response to corticosteroid stimulus","termid":"GO:0071384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to glucocorticoid stimulus","termid":"GO:0071385"}


id: PBO:0051098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin mu DNA binding protein 2","termid":"PBO:0051098"}


id: PBO:0029410
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_response_to_mitotic_G2/M_transition_checkpoint_signaling","termid":"PBO:0029410"}


id: GO:0051449
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to thyrotropin-releasing hormone, a tripeptide hormone that stimulates the release of thyroid-stimulating hormone (TSH) and prolactin by the anterior pituitary and it is produced by the hypothalamus and travels across the median eminence to the pituitary via the pituitary portal system.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone binding","termid":"GO:0017046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"thyrotropin-releasing hormone binding","synonyms":[{"name":"thyrotropin releasing hormone binding","type":"exact"}],"termid":"GO:0051449"}


id: PBO:0085151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleoside triphosphate pyrophosphohydrolase; active against various substrates including ITP, dITP and XTP; mediates exclusion of non canonical purines, pyrimidines from dNTP pools; functions with YJL055W to mediate resistance to 5-FU; specifically reduces the incorporation of 5-FU into RNA without affecting uptake or incorporation of uracil into RNA; protein abundance increases in response to DNA replication stress; yeast HAM1 can complement knockdown of human homolog ITPA","termid":"PBO:0085151"}


id: PBO:0068387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 187","termid":"PBO:0068387"}


id: PBO:0058746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6870","termid":"PBO:0058746"}


id: MONDO:0001302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal enlargement of the heart resulting from long-standing hypertension.","definition_xrefs":["NCIT:C4907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hypertensive heart disease","secondary_identifiers":["ICD9:402.9","DOID:11516","ICD10CM:I11","UMLS:C0152105","ICD9:402","MEDGEN:508889","SCTID:64715009","icd11.foundation:1210166201"],"synonyms":[{"name":"hypertensive cardiomegaly","type":"related"},{"name":"hypertensive cardiopathy","type":"related"},{"name":"hypertensive cardiovascular disease","type":"related"},{"name":"hypertensive heart disease","type":"exact"}],"termid":"MONDO:0001302","xrefs":{"Monarch":{"xref_id":"0001302"}}}


id: PBO:0070834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 13","termid":"PBO:0070834"}


id: FYPO:0007776
data:
  {"alleles_by_uniquename":{"SJAG_00124:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00124","name":"SJAG_00124delta","uniquename":"SJAG_00124:allele-1"},"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_02013:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02013","name":"pyp1delta","uniquename":"SJAG_02013:allele-1"},"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-3":{"allele_type":"other","description":"Pmk1 from S. pombe","gene_uniquename":"SJAG_04551","name":"Pmk1Sp","uniquename":"SJAG_04551:allele-3"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[120988,121111,121123,121127,121132,121135,121138,121178,121181],"is_not":false,"summary":null,"term":"FYPO:0007776"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which hyphae are shorter than normal.","definition_xrefs":["PMID:31150379","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal hyphal growth","termid":"FYPO:0007773"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_00610":null,"SJAG_02013":null,"SJAG_02527":null,"SJAG_04551":null,"SJAG_04697":null},"genotype_count":9,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(Pmk1 from S. pombe)","display_uniquename":"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-3","expression":"Not assayed or wild type"}]}]},"SJAG_00124delta":{"display_name":"SJAG_00124delta","display_uniquename":"SJAG_00124delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00124:allele-1","expression":"Null"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"pmk1delta":{"display_name":"pmk1delta","display_uniquename":"pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]},"pyp1delta":{"display_name":"pyp1delta","display_uniquename":"pyp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02013:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0007773"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0007773","FYPO:0000002"],"is_obsolete":false,"name":"decreased hyphal length","references_by_uniquename":{"PMID:31150379":null,"PMID:34198697":null,"PMID:36058798":null,"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_02013","SJAG_00124","SJAG_04697","SJAG_00610","SJAG_04551","SJAG_02527"],"single_locus_genotype_uniquenames":["Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","SJAG_00124delta","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","pmk1delta","pyp1delta","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","pck2delta","gms1delta"],"synonyms":[{"name":"short hyphae","type":"exact"}],"termid":"FYPO:0007776","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000314":null,"FYPO:0007776":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0000721
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.15.1.1","termid":"PBO:0000721"}


id: PBO:0045459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dorsal inhibitory axon guidance protein","termid":"PBO:0045459"}


id: PBO:0088103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Uridine/cytidine kinase; component of the pyrimidine ribonucleotide salvage pathway that converts uridine into UMP and cytidine into CMP; involved in the pyrimidine deoxyribonucleotide salvage pathway, converting deoxycytidine into dCMP","termid":"PBO:0088103"}


id: MONDO:0007712
data:
  {"annotated_genes":["SJAG_00539","SJAG_00322"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87508,87509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958175"}]},"cv_name":"mondo","definition":"Oculoauriculovertebral spectrum (OAVS) with radial defects is a rare branchial arches and limb primordia development disorder characterized by variable degrees of uni- or bilateral craniofacial malformation and radial defects that result in extremely variable phenotypic manifestations. Characteristic features include low postnatal weight, short stature, vertebral defects, hearing loss, and facial dysmorphism (incl. facial asymmetry, external, middle, and inner ear malformations, orofacial clefts, and mandibular hypoplasia). These features are invariably associated with radial defects, such as preaxial polydactyly, thumb and/or radius hypoplasia/agenesis, or triphalangeal thumb. Cardiac, pulmonary, renal, and central nervous system involvement has also been reported.","definition_xrefs":["Orphanet:2549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00322":null,"SJAG_00539":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"oculoauriculovertebral spectrum with radial defects","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:141400","GARD:3653","SCTID:726722009","UMLS:C0220681","MEDGEN:67392"],"synonyms":[{"name":"Goldenhar syndrome with ipsilateral radial defect","type":"related"},{"name":"Moeschler Clarren syndrome","type":"related"},{"name":"Moeschler-Clarren syndrome","type":"exact"},{"name":"Oavs with radial defect","type":"related"},{"name":"hemifacial microsomia with radial defects","type":"related"},{"name":"hemifacial microsomia-radial defects syndrome","type":"exact"},{"name":"microsomia hemifacial radial defects","type":"related"},{"name":"oculoauriculovertebral spectrum with radial defect","type":"related"}],"termid":"MONDO:0007712","terms_by_termid":{"MONDO:0958175":null},"xrefs":{"Monarch":{"xref_id":"0007712"}}}


id: PATO:0001717
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A radiation emitting quality which obtains by the intensity of the bearer emitted radiation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiation emitting quality","termid":"PATO:0001299"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiation emitting intensity quality","termid":"PATO:0001717"}


id: MONDO:0024621
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant serous cystic neoplasm usually involving the ovary or the pancreas. It is characterized by the presence of invasive malignant glandular epithelial cells which often form papillary structures.","definition_xrefs":["NCIT:C3778"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serous adenocarcinoma","termid":"MONDO:0005278"},{"relation_name":"is_a","term_name":"cystadenocarcinoma","termid":"MONDO:0005596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"serous cystadenocarcinoma","secondary_identifiers":["UMLS:C0206701","ICDO:8441/3","MEDGEN:60212"],"synonyms":[{"name":"serous adenocarcinoma","type":"broad"},{"name":"serous cystadenocarcinoma","type":"exact"}],"termid":"MONDO:0024621","xrefs":{"Monarch":{"xref_id":"0024621"}}}


id: PBO:0051116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1/OR15-1 (non-functional)","termid":"PBO:0051116"}


id: PBO:0083160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps the verified gene CAF20","termid":"PBO:0083160"}


id: PBO:0074180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC38A2 antisense RNA 1","termid":"PBO:0074180"}


id: PR:000050544
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the gtr2 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein gtr2 (Schizosaccharomyces pombe)","pombase_gene_id":"SPCC777.05","termid":"PR:000050544"}


id: PBO:0091535
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binding affinity for ADP-bound F-actin Kd 900 nM","termid":"PBO:0091535"}


id: PBO:0030190
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_sporulation_frequency","termid":"PBO:0030190"}


id: PBO:0084309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Isoamyl acetate-hydrolyzing esterase; required in balance with alcohol acetyltransferase to maintain optimal amounts of isoamyl acetate, which is particularly important in sake brewing","termid":"PBO:0084309"}


id: GO:1904237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of substrate-dependent cell migration, cell attachment to substrate.","definition_xrefs":["PMID:25834989","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-substrate adhesion","termid":"GO:0010811"},{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"regulation of substrate-dependent cell migration, cell attachment to substrate","termid":"GO:1904235"},{"relation_name":"positively_regulates","term_name":"substrate-dependent cell migration, cell attachment to substrate","termid":"GO:0006931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of substrate-dependent cell migration, cell attachment to substrate","synonyms":[{"name":"activation of substrate-bound cell migration, cell attachment to substrate","type":"narrow"},{"name":"activation of substrate-dependent cell migration, cell attachment to substrate","type":"narrow"},{"name":"positive regulation of substrate-bound cell migration, cell attachment to substrate","type":"exact"},{"name":"up regulation of substrate-bound cell migration, cell attachment to substrate","type":"exact"},{"name":"up regulation of substrate-dependent cell migration, cell attachment to substrate","type":"exact"},{"name":"up-regulation of substrate-bound cell migration, cell attachment to substrate","type":"exact"},{"name":"up-regulation of substrate-dependent cell migration, cell attachment to substrate","type":"exact"},{"name":"upregulation of substrate-bound cell migration, cell attachment to substrate","type":"exact"},{"name":"upregulation of substrate-dependent cell migration, cell attachment to substrate","type":"exact"}],"termid":"GO:1904237"}


id: PR:Q10134
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fep1 gene.","definition_xrefs":["UniProtKB:Q10134","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sensing transcription factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23E2.01","synonyms":[{"name":"Gaf-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-fep1","type":"exact"},{"name":"transcription factor gaf2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10134"}


id: MONDO:0001559
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"prolapse of female genital organ","termid":"MONDO:0001592"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perineocele","secondary_identifiers":["ICD10CM:N81.81","ICD9:618.05","DOID:12637","MEDGEN:1843478","UMLS:C1456251"],"termid":"MONDO:0001559","xrefs":{"Monarch":{"xref_id":"0001559"}}}


id: PBO:0040336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP5MC2 pseudogene 2","termid":"PBO:0040336"}


id: PBO:0067419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 536, pseudogene","termid":"PBO:0067419"}


id: PBO:0078953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon TCT) 4-1","termid":"PBO:0078953"}


id: FYPO:0001377
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of calcium ion measured in a cell during a cellular response to salt stress is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular calcium level","termid":"FYPO:0001197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular calcium level during cellular response to salt stress","synonyms":[{"name":"decreased calcium accumulation during cellular response to salt stress","type":"related"},{"name":"decreased cellular calcium ion level during cellular response to salt stress","type":"exact"},{"name":"decreased cellular calcium level during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"decreased cellular calcium level during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"reduced cellular calcium level during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0001377"}


id: PBO:0017608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxalase II","termid":"PBO:0017608"}


id: PBO:0063603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 16","termid":"PBO:0063603"}


id: PBO:0041601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 12","termid":"PBO:0041601"}


id: GO:1900910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of olefin metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of olefin metabolic process","termid":"GO:1900908"},{"relation_name":"positively_regulates","term_name":"olefin metabolic process","termid":"GO:1900673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of olefin metabolic process","synonyms":[{"name":"activation of olefin metabolic process","type":"narrow"},{"name":"activation of olefin metabolism","type":"narrow"},{"name":"positive regulation of olefin metabolism","type":"related"},{"name":"up regulation of olefin metabolic process","type":"exact"},{"name":"up regulation of olefin metabolism","type":"related"},{"name":"up-regulation of olefin metabolic process","type":"exact"},{"name":"up-regulation of olefin metabolism","type":"related"},{"name":"upregulation of olefin metabolic process","type":"exact"},{"name":"upregulation of olefin metabolism","type":"related"}],"termid":"GO:1900910"}


id: GO:0005430
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of amines across synaptic vesicle membranes.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete synaptic vesicle amine transmembrane transporter activity (obsolete GO:0005430)","termid":"GO:0005430"}


id: PBO:0062254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily C member 1","termid":"PBO:0062254"}


id: MONDO:0008603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any isolated trigonocephaly in which the cause of the disease is a mutation in the FGFR1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isolated trigonocephaly","termid":"MONDO:0018065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"trigonocephaly 1","secondary_identifiers":["UMLS:C0432122","OMIM:190440","MEDGEN:98473","GARD:18558"],"synonyms":[{"name":"FGFR1 isolated trigonocephaly","type":"exact"},{"name":"TRIGNO1","type":"related"},{"name":"craniosynostosis, metopic","type":"related"},{"name":"isolated trigonocephaly caused by mutation in FGFR1","type":"exact"},{"name":"trigonocephaly 1","type":"exact"},{"name":"trigonocephaly type 1","type":"exact"}],"termid":"MONDO:0008603","xrefs":{"Monarch":{"xref_id":"0008603"}}}


id: MONDO:0031030
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 107, susceptibility to invasive staphylococcus aureus infection","secondary_identifiers":["UMLS:C5774192","MEDGEN:1823965","OMIM:619986"],"synonyms":[{"name":"IMD107","type":"exact"},{"name":"immunodeficiency 107, susceptibility to invasive staphylococcus aureus infection","type":"exact"}],"termid":"MONDO:0031030","xrefs":{"Monarch":{"xref_id":"0031030"}}}


id: PBO:0119736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyl-(protein) hydrolase inactive protein Phi1","termid":"PBO:0119736"}


id: PBO:0051284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-27","termid":"PBO:0051284"}


id: PBO:0058275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4652","termid":"PBO:0058275"}


id: MONDO:0010184
data:
  {"annotated_genes":["SJAG_01199"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88473],"is_not":false,"summary":null,"term":"MONDO:0010184"}]},"cv_name":"mondo","definition":"A form of methylmalonic acidemia with homocystinuria, an inborn error of vitamin B12 (cobalamin) metabolism characterized by megaloblastic anemia, lethargy, failure to thrive, developmental delay, intellectual deficit and seizures. cblC type methylmalonic acidemia with homocystinuria is caused by mutations in the MMACHC gene (1p36.3) and is transmitted in an autosomal recessive manner.","definition_xrefs":["Orphanet:79282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylmalonic aciduria and homocystinuria","termid":"MONDO:0016826"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01199":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005570","MONDO:0004736","MONDO:0002280","MONDO:0005244"],"is_obsolete":false,"name":"methylmalonic aciduria and homocystinuria type cblC","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:12128","NCIT:C142174","SCTID:74653006","DOID:0050715","MEDGEN:341256","NANDO:2201107","NANDO:1201040","UMLS:C1848561","OMIM:277400"],"synonyms":[{"name":"MAHCC","type":"related"},{"name":"cblC","type":"related"},{"name":"cblC - cobalamin locus c","type":"related"},{"name":"cblC defect","type":"exact"},{"name":"cblC methylmalonic acidemia and homocystinuria","type":"related"},{"name":"cobalamin C defect","type":"exact"},{"name":"cobalamin C deficiency","type":"exact"},{"name":"cobalamin c disease","type":"exact"},{"name":"cobalamin locus c variant","type":"related"},{"name":"combined defect in adenosylcobalamin and methylcobalamin synthesis, type cblC","type":"exact"},{"name":"methylmalonic acidemia and homocystinuria cblC","type":"related"},{"name":"methylmalonic acidemia and homocystinuria, cblC type","type":"related"},{"name":"methylmalonic acidemia with homocystinuria type cblC","type":"related"},{"name":"methylmalonic acidemia with homocystinuria, type cblC","type":"related"},{"name":"methylmalonic aciduria and homocystinuria cblC","type":"related"},{"name":"methylmalonic aciduria and homocystinuria type cblC","type":"exact"},{"name":"methylmalonic aciduria and homocystinuria, cblC type","type":"related"},{"name":"methylmalonic aciduria and homocystinuria, cblC type, digenic","type":"related"},{"name":"methylmalonic aciduria and homocystinuria, vitamin B12-responsive","type":"related"},{"name":"methylmalonic aciduria with homocystinuria, type cblC","type":"exact"},{"name":"vitamin B12 metabolic defect with combined deficiency of methylmalonyl-Coa mutase and homocysteine:methyltetrahydrofolate methyltransferase","type":"related"}],"termid":"MONDO:0010184","terms_by_termid":{"MONDO:0010184":null},"xrefs":{"Monarch":{"xref_id":"0010184"}}}


id: PBO:0000205
data:
  {"annotation_feature_type":"gene","cv_name":"m_f_g","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleocytoplasmic shuttling protein","termid":"PBO:0000205"}


id: GO:0016689
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 Mn2+ + 2 H+ + hydrogen peroxide = 2 Mn3+ + 2 H2O.","definition_xrefs":["EC:1.11.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxidase activity","termid":"GO:0004601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"manganese peroxidase activity","secondary_identifiers":["MetaCyc:MANGANESE-PEROXIDASE-RXN","RHEA:22776"],"synonyms":[{"name":"Mn(II):hydrogen-peroxide oxidoreductase activity","type":"related"},{"name":"Mn-dependent (NADH-oxidizing) peroxidase activity","type":"related"},{"name":"Mn-dependent peroxidase activity","type":"related"},{"name":"peroxidase-M2","type":"related"}],"termid":"GO:0016689"}


id: PBO:0051759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin 5","termid":"PBO:0051759"}


id: MONDO:0001275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinal meningioma isa rare type of spinal cord cancer. The spinal cord is part of the central nervous system. This tumor often affects middle-aged women. Tumors of the spinal cord can be either primary or arise from other primary tumors (metastatic), and are typically slow growing. The initial signs and symptoms include headacheand recent onset of seizures. Other features are motor deficits, sensory deficits, pain, and sphincter dysfunction. The thoracic spine (middle back) is the most common site, followed by the cervical spine (neck). These tumors are rarely seen in the lumbar region (lower back). T he only proven risk factor in the development of meningioma is exposure to ionizing radiation. Also, patients with neurofibromatosis type 2 are at increased risk of developing meningioma. Surgery is the treatment of choice and complete tumor removal is reached in the vast majority of patients. The prognosis after surgical resection is excellent.","direct_ancestors":[{"relation_name":"is_a","term_name":"intraspinal meningioma","termid":"MONDO:0001279"},{"relation_name":"is_a","term_name":"spinal cord neoplasm","termid":"MONDO:0021234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal meningioma","secondary_identifiers":["UMLS:C0347515","SCTID:189167009","GARD:10264","NCIT:C6935","DOID:1138","MEDGEN:87576"],"synonyms":[{"name":"meningioma (disease) of spinal cord","type":"exact"},{"name":"meningioma of spinal cord","type":"exact"},{"name":"meningioma of the spinal cord","type":"exact"},{"name":"meningioma, spine","type":"related"},{"name":"spinal cord meningioma","type":"exact"},{"name":"spinal cord meningioma (disease)","type":"exact"}],"termid":"MONDO:0001275","xrefs":{"Monarch":{"xref_id":"0001275"}}}


id: PBO:0060686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDST1 antisense RNA 1","termid":"PBO:0060686"}


id: GO:0035793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of metanephric mesenchymal cell migration resulting from the platelet-derived growth factor receptor-beta signaling pathway.","definition_xrefs":["PMID:10734101","GOC:mtg_kidney_jan10","GOC:yaf","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway","termid":"GO:1900238"},{"relation_name":"is_a","term_name":"positive regulation of metanephric mesenchymal cell migration","termid":"GO:2000591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway","synonyms":[{"name":"positive regulation of metanephric mesenchymal cell migration by PDGF receptor-beta signaling pathway","type":"exact"},{"name":"positive regulation of metanephric mesenchymal cell migration by PDGFR-beta signaling pathway","type":"exact"},{"name":"positive regulation of metanephric mesenchymal cell migration by betaPDGF receptor signaling pathway","type":"exact"},{"name":"positive regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signalling pathway","type":"exact"}],"termid":"GO:0035793"}


id: GO:0036487
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of nitric oxide synthase.","definition_xrefs":["PMID:17242280","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"},{"relation_name":"is_a","term_name":"nitric-oxide synthase regulator activity","termid":"GO:0030235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0004857","GO:0003674","GO:0140678"],"is_obsolete":false,"name":"nitric-oxide synthase inhibitor activity","secondary_identifiers":["Reactome:R-HSA-203712"],"synonyms":[{"name":"NOS inhibitor activity","type":"exact"},{"name":"nitric oxide synthase inhibitor activity","type":"exact"}],"termid":"GO:0036487"}


id: PBO:0090704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex subunit Elp6","termid":"PBO:0090704"}


id: GO:0106423
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: C-terminal L-alpha-aminoacyl-L-glutamyl-L-glutamyl-L-tyrosyl-[tubulin] + H2O = C-terminal L-alpha-aminoacyl-L-glutamyl-L-glutamyl-[tubulin] + L-tyrosine.","definition_xrefs":["PMID:35482892","RHEA:57444","PMID:29146869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metallocarboxypeptidase activity","termid":"GO:0004181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0008233","GO:0016787","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"tubulin-tyrosine carboxypeptidase","secondary_identifiers":["EC:3.4.17.17"],"synonyms":[{"name":"tubulinyl-Tyr carboxypeptidase","type":"exact"}],"termid":"GO:0106423"}


id: PBO:0066568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid like 1","termid":"PBO:0066568"}


id: FYPO:0000670
data:
  {"alleles_by_uniquename":{"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121055,121056,121057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000671"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid separation is abnormal. Mitotic sister chromatid separation is the process in which sister chromatids are physically detached from each other during mitosis.","definition_xrefs":["PomBase:mah","GO:0051306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"},{"relation_name":"part_of","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03449":null},"genotype_count":3,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000641","FYPO:0000337","FYPO:0005447","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abnormal mitotic sister chromatid separation","references_by_uniquename":{"PMID:24184107":null},"single_locus_annotated_genes":["SJAG_03449"],"single_locus_genotype_uniquenames":["man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","man1delta"],"synonyms":[{"name":"abnormal mitotic chromosome separation","type":"exact"},{"name":"abnormal sister chromatid separation during mitosis","type":"exact"},{"name":"abnormal sister chromatid separation during mitotic cell cycle","type":"related"},{"name":"abnormal sister chromatid separation during vegetative growth","type":"exact"},{"name":"aneuploidy","type":"related"},{"name":"mitotic chromosome missegregation","type":"related"}],"termid":"FYPO:0000670","terms_by_termid":{"FYPO:0000671":null}}


id: GO:0008477
data:
  {"annotated_genes":["SJAG_01781","SJAG_02179","SJAG_00957","SJAG_04927"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77003,114027],"is_not":false,"summary":null,"term":"GO:0008477"},{"annotations":[100401,100402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106432"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a N-D-ribosylpurine + H2O = a purine + D-ribose.","definition_xrefs":["EC:3.2.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_01781":null,"SJAG_02179":null,"SJAG_04927":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"purine nucleosidase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PURINE-NUCLEOSIDASE-RXN","RHEA:23344"],"synonyms":[{"name":"IAG-NH activity","type":"related"},{"name":"IAG-nucleoside hydrolase activity","type":"related"},{"name":"N-D-ribosylpurine ribohydrolase activity","type":"related"},{"name":"N-ribosyl purine ribohydrolase activity","type":"related"},{"name":"inosine-adenosine-guanosine preferring nucleoside hydrolase activity","type":"narrow"},{"name":"nucleosidase activity","type":"broad"},{"name":"nucleosidase g activity","type":"narrow"},{"name":"nucleoside hydrolase activity","type":"broad"},{"name":"purine beta-ribosidase activity","type":"related"},{"name":"purine nucleosidase reaction","type":"exact"},{"name":"purine nucleoside hydrolase activity","type":"related"},{"name":"purine ribonucleosidase activity","type":"related"},{"name":"purine-nucleoside ribohydrolase activity","type":"related"},{"name":"purine-specific nucleoside N-ribohydrolase activity","type":"related"},{"name":"ribonucleoside hydrolase activity","type":"related"}],"termid":"GO:0008477","terms_by_termid":{"GO:0008477":null,"GO:0106432":null}}


id: GO:0006147
data:
  {"annotated_genes":["SJAG_01997"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69626],"is_not":false,"summary":null,"term":"GO:0006147"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of guanine, 2-amino-6-hydroxypurine, a purine that is one of the five main bases found in nucleic acids and a component of a number of phosphorylated guanosine derivatives whose metabolic or regulatory functions are important.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase catabolic process","termid":"GO:0006145"},{"relation_name":"is_a","term_name":"guanine metabolic process","termid":"GO:0046098"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01997":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"guanine catabolic process","references_by_uniquename":{"GO_REF:0000041":null},"synonyms":[{"name":"guanine breakdown","type":"exact"},{"name":"guanine catabolism","type":"exact"},{"name":"guanine degradation","type":"exact"}],"termid":"GO:0006147","terms_by_termid":{"GO:0006147":null}}


id: PBO:0000788
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.-","termid":"PBO:0000788"}


id: PBO:0081532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 442","termid":"PBO:0081532"}


id: GO:0007084
data:
  {"annotated_genes":["SJAG_00900","SJAG_00416","SJAG_04489","SJAG_03891","SJAG_01745","SJAG_03892","SJAG_03783","SJAG_01050","SJAG_01242","SJAG_05207"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93156,97779,99770,102709,104967,108394,121335,121336,121337,121338],"is_not":false,"summary":null,"term":"GO:0007084"}]},"cv_name":"biological_process","definition":"The mitotic cell cycle process involving ESCRTIII that results in reformation of the nuclear envelope after mitotic nuclear division. In organisms undergoing closed mitosis this involves resealing or 'repair' of the nuclear envelope in the nuclear bridge.","definition_xrefs":["PMID:32848252","PMID:26040712","PMID:32109380","PMID:28242692"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane reassembly","termid":"GO:0031468"},{"relation_name":"is_a","term_name":"mitotic nuclear membrane organization","termid":"GO:0101024"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00416":null,"SJAG_00900":null,"SJAG_01050":null,"SJAG_01242":null,"SJAG_01745":null,"SJAG_03783":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_04489":null,"SJAG_05207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0044085","GO:0061024","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"mitotic nuclear membrane reassembly","references_by_uniquename":{"GO_REF:0000107":null,"PMID:32109380":null,"PMID:32243490":null},"secondary_identifiers":["Reactome:R-HSA-2995410"],"synonyms":[{"name":"mitotic nuclear envelope reassembly","type":"related"},{"name":"nuclear envelope repair","type":"broad"},{"name":"nuclear envelope resealing","type":"broad"}],"termid":"GO:0007084","terms_by_termid":{"GO:0007084":null}}


id: PBO:0080097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"undifferentiated embryonic cell transcription factor 1","termid":"PBO:0080097"}


id: FYPO:0005576
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to chromatin is decreased during the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiotic cell cycle","termid":"FYPO:0004094"},{"relation_name":"is_a","term_name":"decreased protein localization to chromatin","termid":"FYPO:0006631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to chromatin during meiotic cell cycle","synonyms":[{"name":"decreased protein localisation to chromatin during meiotic cell cycle","type":"exact"},{"name":"reduced protein localization to chromatin during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0005576"}


id: PBO:0049220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRK3 antisense RNA 1","termid":"PBO:0049220"}


id: PBO:0070606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 74","termid":"PBO:0070606"}


id: MONDO:0100303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any annular epidermolytic ichthiosis in which the cause of the disease is a variation in the KRT10 gene.","definition_xrefs":["OMIM:607602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"annular epidermolytic ichthyosis","termid":"MONDO:0011870"},{"relation_name":"is_a","term_name":"epidermolytic hyperkeratosis 2","termid":"MONDO:0958184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005093"],"is_obsolete":false,"name":"ichthyosis, annular epidermolytic 1","secondary_identifiers":["GARD:15417"],"termid":"MONDO:0100303","xrefs":{"Monarch":{"xref_id":"0100303"}}}


id: PBO:0048286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase like 6","termid":"PBO:0048286"}


id: PBO:0052961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kynureninase pseudogene 1","termid":"PBO:0052961"}


id: GO:0046881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of follicle-stimulating hormone.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gonadotropin secretion","termid":"GO:0032278"},{"relation_name":"is_a","term_name":"regulation of follicle-stimulating hormone secretion","termid":"GO:0046880"},{"relation_name":"positively_regulates","term_name":"follicle-stimulating hormone secretion","termid":"GO:0046884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of follicle-stimulating hormone secretion","synonyms":[{"name":"activation of follicle-stimulating hormone secretion","type":"narrow"},{"name":"positive regulation of follicle stimulating hormone secretion","type":"exact"},{"name":"stimulation of follicle-stimulating hormone secretion","type":"narrow"},{"name":"up regulation of follicle-stimulating hormone secretion","type":"exact"},{"name":"up-regulation of follicle-stimulating hormone secretion","type":"exact"},{"name":"upregulation of follicle-stimulating hormone secretion","type":"exact"}],"termid":"GO:0046881"}


id: GO:1901136
data:
  {"annotated_genes":["SJAG_02009","SJAG_02945","SJAG_02950","SJAG_04192","SJAG_02951","SJAG_01310","SJAG_00409","SJAG_04870","SJAG_00685","SJAG_04927","SJAG_01858","SJAG_03032","SJAG_02580","SJAG_00461","SJAG_00620","SJAG_04048","SJAG_02107","SJAG_02954","SJAG_03660","SJAG_01012","SJAG_02959","SJAG_00957","SJAG_02135","SJAG_02796","SJAG_03828","SJAG_03373","SJAG_02481","SJAG_00839","SJAG_04334","SJAG_06621","SJAG_03818","SJAG_01359","SJAG_03676","SJAG_00027","SJAG_06622","SJAG_05314","SJAG_01673","SJAG_02369","SJAG_02785","SJAG_04495","SJAG_00605","SJAG_03903","SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901911"},{"annotations":[89399,89400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006154"},{"annotations":[118237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006198"},{"annotations":[100077,107281,99806,118208,111235,105202,79584,105459,111238,111237,74174,96338,107650,111239,111240,111241,107280,111236,107282,107651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[68447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006032"},{"annotations":[91010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006216"},{"annotations":[100802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"},{"annotations":[81238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"},{"annotations":[115572,115578,115579,115590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033499"},{"annotations":[70816,63867],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046168"},{"annotations":[90422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[77883,74826],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[114026,77005,92886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006152"},{"annotations":[92464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046135"},{"annotations":[71755],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"},{"annotations":[95355,97522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097466"},{"annotations":[78196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of carbohydrate derivative.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":43,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00409":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00620":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_00957":null,"SJAG_01012":null,"SJAG_01310":null,"SJAG_01359":null,"SJAG_01673":null,"SJAG_01858":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02481":null,"SJAG_02580":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_02950":null,"SJAG_02951":null,"SJAG_02954":null,"SJAG_02959":null,"SJAG_03032":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03676":null,"SJAG_03818":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04487":null,"SJAG_04495":null,"SJAG_04870":null,"SJAG_04927":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carbohydrate derivative catabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null},"synonyms":[{"name":"carbohydrate derivative breakdown","type":"exact"},{"name":"carbohydrate derivative catabolism","type":"exact"},{"name":"carbohydrate derivative degradation","type":"exact"}],"termid":"GO:1901136","terms_by_termid":{"GO:0006032":null,"GO:0006110":null,"GO:0006152":null,"GO:0006154":null,"GO:0006198":null,"GO:0006216":null,"GO:0006256":null,"GO:0033499":null,"GO:0035863":null,"GO:0045820":null,"GO:0046081":null,"GO:0046135":null,"GO:0046168":null,"GO:0061613":null,"GO:0061621":null,"GO:0097466":null,"GO:1901911":null}}


id: PBO:0011995
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Johanson-Blizzard syndrome","termid":"PBO:0011995"}


id: GO:0039544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by a virus resulting in the hydrolysis of the host RIG-I protein (also known as DDX58) by cleavage of peptide bonds, thereby inhibiting RIG-I signal transduction.","definition_xrefs":["PMID:19628239"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host RIG-I activity by RIG-I proteolysis (obsolete GO:0039544)","synonyms":[{"name":"cleavage of RIG-I by viral proteinase","type":"exact"},{"name":"inhibition by virus of host RIG-I activity by RIG-I proteolysis","type":"related"}],"termid":"GO:0039544"}


id: FYPO:0006195
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which all detectable microtubules are present in fewer bundles than normal (usually only one or two), and bundles are longer than normal and curved around one or both ends of the cell.","definition_xrefs":["PMID:16481403","PomBase:vw","PomBase:mah","PMID:14742702"],"direct_ancestors":[{"relation_name":"has_part","term_name":"long interphase microtubules curved around cell end","termid":"FYPO:0005880"},{"relation_name":"is_a","term_name":"long curved interphase microtubules","termid":"FYPO:0004511"},{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0002399","FYPO:0000054","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased number of elongated microtubule bundles curved around cell end","synonyms":[{"name":"decreased number of elongated MT bundles curved around cell end","type":"exact"},{"name":"decreased number of elongated interphase microtubule bundles curved around cell end","type":"exact"},{"name":"decreased number of elongated microtubule bundles curved around cell end during mitotic cell cycle","type":"related"},{"name":"decreased number of elongated microtubule bundles curved around cell end during vegetative growth","type":"exact"},{"name":"decreased number of elongated microtubule bundles curved around cell tip","type":"exact"},{"name":"decreased number of elongated microtubule bundles curved around end of cell","type":"exact"},{"name":"decreased number of microtubule arrays curved around cell end","type":"related"},{"name":"single elongated microtubule bundle curved around cell end","type":"narrow"}],"termid":"FYPO:0006195"}


id: PATO:0000531
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000531 macronutrient sensitivity value (obsolete PATO:0000531)","termid":"PATO:0000531"}


id: GO:1902576
data:
  {"annotated_genes":["SJAG_01068","SJAG_02162","SJAG_01210","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118709],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903464"},{"annotations":[104189,110735,99586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903467"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nuclear cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","PMID:19033384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of nuclear cell cycle DNA replication","termid":"GO:0033262"},{"relation_name":"is_a","term_name":"negative regulation of DNA-templated DNA replication","termid":"GO:2000104"},{"relation_name":"negatively_regulates","term_name":"nuclear DNA replication","termid":"GO:0033260"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01068":null,"SJAG_01210":null,"SJAG_02162":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006260","GO:0007049","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of nuclear cell cycle DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of DNA replication during S phase","type":"related"},{"name":"down regulation of DNA replication involved in S phase","type":"exact"},{"name":"down regulation of DNA replication involved in S-phase","type":"exact"},{"name":"down regulation of nuclear cell cycle DNA replication","type":"exact"},{"name":"down-regulation of DNA replication during S phase","type":"related"},{"name":"down-regulation of DNA replication involved in S phase","type":"exact"},{"name":"down-regulation of DNA replication involved in S-phase","type":"exact"},{"name":"down-regulation of nuclear cell cycle DNA replication","type":"exact"},{"name":"downregulation of DNA replication during S phase","type":"related"},{"name":"downregulation of DNA replication involved in S phase","type":"exact"},{"name":"downregulation of DNA replication involved in S-phase","type":"exact"},{"name":"downregulation of nuclear cell cycle DNA replication","type":"exact"},{"name":"inhibition of DNA replication during S phase","type":"related"},{"name":"inhibition of DNA replication involved in S phase","type":"narrow"},{"name":"inhibition of DNA replication involved in S-phase","type":"narrow"},{"name":"inhibition of nuclear cell cycle DNA replication","type":"narrow"},{"name":"negative regulation of DNA replication during S phase","type":"related"},{"name":"negative regulation of DNA replication involved in S phase","type":"exact"},{"name":"negative regulation of DNA replication involved in S-phase","type":"exact"}],"termid":"GO:1902576","terms_by_termid":{"GO:1903464":null,"GO:1903467":null}}


id: PBO:0071775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P0 pseudogene 3","termid":"PBO:0071775"}


id: GO:0042062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in an increase in the efficacy of transmission at a neuromuscular synapse.","definition_xrefs":["GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of synaptic transmission","termid":"GO:0050806"},{"relation_name":"part_of","term_name":"regulation of synaptic assembly at neuromuscular junction","termid":"GO:0008582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"long-term strengthening of neuromuscular junction","termid":"GO:0042062"}


id: GO:0001652
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structure found in the nucleolus, which contains nearly completed preribosomal particles destined for the cytoplasm.","definition_xrefs":["PMID:10754561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005730","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"granular component","secondary_identifiers":["NIF_Subcellular:sao1217793903"],"synonyms":[{"name":"pars granulosa","type":"broad"}],"termid":"GO:0001652"}


id: SO:0000805
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that is engineered and foreign.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"has_quality","term_name":"foreign","termid":"SO:0000784"},{"relation_name":"is_a","term_name":"engineered_region","termid":"SO:0000804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_foreign_region","synonyms":[{"name":"engineered foreign region","type":"exact"}],"termid":"SO:0000805"}


id: GO:0033362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lysine, via the intermediate diaminopimelate; in this pathway tetrahydrodipicolinate is converted to meso-diaminopimelate in two enzymatic steps.","definition_xrefs":["GOC:mah","GOC:pr","MetaCyc:PWY-5097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysine biosynthetic process via diaminopimelate","termid":"GO:0009089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"lysine biosynthetic process via diaminopimelate, diaminopimelate-aminotransferase pathway","synonyms":[{"name":"lysine anabolism via diaminopimelate, diaminopimelate-aminotransferase pathway","type":"exact"},{"name":"lysine biosynthesis via diaminopimelate, diaminopimelate-aminotransferase pathway","type":"exact"},{"name":"lysine formation via diaminopimelate, diaminopimelate-aminotransferase pathway","type":"exact"},{"name":"lysine synthesis via diaminopimelate, diaminopimelate-aminotransferase pathway","type":"exact"}],"termid":"GO:0033362"}


id: PBO:0003707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein Rec6","termid":"PBO:0003707"}


id: GO:0002701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of the production of molecular mediator of immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"regulation of production of molecular mediator of immune response","termid":"GO:0002700"},{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"negatively_regulates","term_name":"production of molecular mediator of immune response","termid":"GO:0002440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of production of molecular mediator of immune response","synonyms":[{"name":"down regulation of production of molecular mediator of immune response","type":"exact"},{"name":"down-regulation of production of molecular mediator of immune response","type":"exact"},{"name":"downregulation of production of molecular mediator of immune response","type":"exact"},{"name":"inhibition of production of molecular mediator of immune response","type":"narrow"}],"termid":"GO:0002701"}


id: PBO:0045634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 46 (pseudogene)","termid":"PBO:0045634"}


id: GO:0071860
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a proctolin receptor.","definition_xrefs":["GOC:mah","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"proctolin receptor binding","termid":"GO:0071860"}


id: FYPO:0007754
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which phase II of mitotic spindle assembly does not occur. During phase II, the spindle is normally maintained at a constant length during mitotic metaphase.","definition_xrefs":["PomBase:mah","PMID:32723864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished mitotic spindle assembly","termid":"FYPO:0001683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000337","FYPO:0000002","FYPO:0000054","FYPO:0000631","FYPO:0005447","FYPO:0001320","FYPO:0000641"],"is_obsolete":false,"name":"abolished mitotic spindle formation phase II","synonyms":[{"name":"abnormal mitotic spindle formation, without spindle phase II","type":"exact"},{"name":"abolished mitotic spindle assembly phase II","type":"exact"},{"name":"abolished mitotic spindle formation (spindle phase two)","type":"exact"}],"termid":"FYPO:0007754"}


id: PBO:0078773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 2-5","termid":"PBO:0078773"}


id: GO:0090733
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A extracellular matrix complex involved in cell adhesion and cell migration. Typically homotrimeric or homohexameric. In mammals, four complexes exist: Tenascin-C, Tenascin-N (also known as Tenascin-W), Tenascin-X and Tenascin-R.","definition_xrefs":["PMID:11731446","PMID:12845616","PMID:17909022","PMID:23658023","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein complex involved in cell-matrix adhesion","termid":"GO:0098637"},{"relation_name":"part_of","term_name":"extracellular matrix","termid":"GO:0031012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"tenascin complex","synonyms":[{"name":"Tenascin-C","type":"narrow"},{"name":"Tenascin-N","type":"narrow"},{"name":"Tenascin-R","type":"narrow"},{"name":"Tenascin-W","type":"narrow"},{"name":"Tenascin-X","type":"narrow"}],"termid":"GO:0090733"}


id: PBO:0060931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor of activated T cells 2","termid":"PBO:0060931"}


id: PBO:0083844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exopolyphosphatase; hydrolyzes inorganic polyphosphate (poly P) into Pi residues; located in the cytosol, plasma membrane, and mitochondrial matrix","termid":"PBO:0083844"}


id: MONDO:0032664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary dyskinesia, primary, 40","secondary_identifiers":["OMIM:618300","DOID:0111853","UMLS:C4749028","MEDGEN:1648365"],"synonyms":[{"name":"CILD40","type":"related"},{"name":"CILIARY DYSKINESIA, PRIMARY, 40","type":"related"},{"name":"Ciliary Dyskinesia, Primary, 40, With or Without Situs Inversus","type":"related"}],"termid":"MONDO:0032664","xrefs":{"Monarch":{"xref_id":"0032664"}}}


id: MOD:00708
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively adds oxygen atoms to a sulfur atom of L-cysteine residue without removing hydrogen atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur oxygenated residue","termid":"MOD:00680"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"sulfur oxygenated L-cysteine","synonyms":[{"name":"SOxyCys","type":"exact"}],"termid":"MOD:00708"}


id: GO:0050339
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dTTP + H2O = dTDP + H+ + phosphate.","definition_xrefs":["RHEA:19013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside triphosphate phosphatase activity","termid":"GO:0017111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"TTPase activity","secondary_identifiers":["EC:3.6.1.39","MetaCyc:THYMIDINE-TRIPHOSPHATASE-RXN"],"synonyms":[{"name":"dTTP nucleotidohydrolase activity","type":"related"},{"name":"dTTPase activity","type":"related"},{"name":"deoxythymidine-5'-triphosphatase activity","type":"related"},{"name":"thymidine triphosphatase activity","type":"exact"},{"name":"thymidine triphosphate nucleotidohydrolase activity","type":"related"},{"name":"thymidine-triphosphatase activity","type":"exact"}],"termid":"GO:0050339"}


id: MONDO:0016080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital respiratory-biliary fistula (RBF) is a rare developmental defect characterized by an anomalous connection of trachea or bronchus with left hepatic duct presenting with respiratory distress, recurrent respiratory infections and biliary expectoration or vomitus.","definition_xrefs":["Orphanet:2040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital bronchobiliary fistula","secondary_identifiers":["SCTID:719452004","icd11.foundation:420429663","GARD:1475","MEDGEN:930385","UMLS:C4304716"],"termid":"MONDO:0016080","xrefs":{"Monarch":{"xref_id":"0016080"}}}


id: PBO:0114418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACER antisense RNA 1","termid":"PBO:0114418"}


id: GO:0009103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lipopolysaccharides, any of a group of related, structurally complex components of the outer membrane of Gram-negative bacteria.","definition_xrefs":["GOC:ai","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"is_a","term_name":"lipid biosynthetic process","termid":"GO:0008610"},{"relation_name":"is_a","term_name":"lipopolysaccharide metabolic process","termid":"GO:0008653"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lipopolysaccharide biosynthetic process","secondary_identifiers":["KEGG_PATHWAY:map00540"],"synonyms":[{"name":"LPS biosynthetic process","type":"exact"},{"name":"lipopolysaccharide anabolism","type":"exact"},{"name":"lipopolysaccharide biosynthesis","type":"exact"},{"name":"lipopolysaccharide formation","type":"exact"},{"name":"lipopolysaccharide synthesis","type":"exact"}],"termid":"GO:0009103"}


id: GO:0003087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the release of epinephrine from nerve endings modulates the force of heart muscle contraction.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of the force of heart contraction by epinephrine","termid":"GO:0003059"},{"relation_name":"part_of","term_name":"positive regulation of the force of heart contraction by neuronal epinephrine-norepinephrine","termid":"GO:0003090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of the force of heart contraction by neuronal epinephrine","synonyms":[{"name":"increased force of heart contraction by epinephrine released from the nerve endings","type":"exact"},{"name":"increased force of heart contraction by neuronal adrenaline","type":"related"},{"name":"increased force of heart contraction by neuronal epinephrine","type":"exact"},{"name":"positive regulation of heart contraction by adrenaline","type":"related"},{"name":"positive regulation of heart contraction by neuronal epinephrine","type":"related"}],"termid":"GO:0003087"}


id: PBO:0001436
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human MAPRE1","termid":"PBO:0001436"}


id: PBO:0061226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NODAL modulator 2","termid":"PBO:0061226"}


id: PBO:0043139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 7","termid":"PBO:0043139"}


id: PBO:0016073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medial cortical node protein Nod1","termid":"PBO:0016073"}


id: PBO:0042494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDH13 antisense RNA 2","termid":"PBO:0042494"}


id: PBO:0002063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic spindle pole body protein Kms1","termid":"PBO:0002063"}


id: MONDO:0054561
data:
  {"annotated_genes":["SJAG_04582"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88687],"is_not":false,"summary":null,"term":"MONDO:0054561"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anauxetic dysplasia","termid":"MONDO:0011773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04582":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"anauxetic dysplasia 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1384439","UMLS:C4479357","OMIM:617396","DOID:0080962"],"synonyms":[{"name":"ANXD2","type":"related"},{"name":"anauxetic dysplasia 2","type":"exact"}],"termid":"MONDO:0054561","terms_by_termid":{"MONDO:0054561":null},"xrefs":{"Monarch":{"xref_id":"0054561"}}}


id: PBO:0038831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 4","termid":"PBO:0038831"}


id: MONDO:0000105
data:
  {"annotated_genes":["SJAG_02297"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010480"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nonspherocytic hemolytic anemia","termid":"MONDO:0006506"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02297":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"anemia, nonspherocytic hemolytic","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4025735","MEDGEN:871250"],"termid":"MONDO:0000105","terms_by_termid":{"MONDO:0010480":null},"xrefs":{"Monarch":{"xref_id":"0000105"}}}


id: PBO:0066936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 238","termid":"PBO:0066936"}


id: MONDO:0100370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A new infection by the hepatitis B virus, which can be transmitted by direct contact of infected blood with mucous membranes or open areas of the skin. Signs and symptoms may include loss of appetite, joint and muscle pain, low-grade fever and stomach pain. Two to six percent of adults progress to a chronic infection, while 90% of infants become chronically ill. A vaccine is available for those at risk.","definition_xrefs":["NCIT:C157781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatitis B virus infection","termid":"MONDO:0005344"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"acute hepatitis B virus infection","secondary_identifiers":["ICD10CM:B16"],"synonyms":[{"name":"acute hepatitis B","type":"exact"}],"termid":"MONDO:0100370","xrefs":{"Monarch":{"xref_id":"0100370"}}}


id: GO:0007261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a dimer of two STAT proteins (Signal Transducers and Activators of Transcription) following their activation by members of the janus activated kinase (JAK) family of tyrosine kinases.","definition_xrefs":["GOC:jl","PMID:12039028"],"gene_count":0,"genotype_count":0,"name":"obsolete JAK-induced STAT protein dimerization (obsolete GO:0007261)","synonyms":[{"name":"JAK-induced STAT protein dimerization","type":"exact"}],"termid":"GO:0007261"}


id: FYPO:0000240
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the size, shape, or structure of invasively growing filaments is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"abnormal filament morphology","synonyms":[{"name":"filament morphology aberrant","type":"exact"}],"termid":"FYPO:0000240"}


id: GO:0045220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of FasL.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of FasL production (obsolete GO:0045220)","synonyms":[{"name":"activation of FasL biosynthetic process","type":"narrow"},{"name":"positive regulation of FasL anabolism","type":"exact"},{"name":"positive regulation of FasL biosynthesis","type":"exact"},{"name":"positive regulation of FasL biosynthetic process","type":"exact"},{"name":"positive regulation of FasL formation","type":"exact"},{"name":"positive regulation of FasL synthesis","type":"exact"},{"name":"stimulation of FasL biosynthetic process","type":"narrow"},{"name":"up regulation of FasL biosynthetic process","type":"exact"},{"name":"up-regulation of FasL biosynthetic process","type":"exact"},{"name":"upregulation of FasL biosynthetic process","type":"exact"}],"termid":"GO:0045220"}


id: PATO:0000915
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A 1-D extent quality which is equal to the dimension through an object as opposed to its length or width.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1-D extent","termid":"PATO:0001708"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thickness","termid":"PATO:0000915"}


id: PBO:0045425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergent-paired related homeobox pseudogene 5","termid":"PBO:0045425"}


id: PBO:0039866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 27 pseudogene 1","termid":"PBO:0039866"}


id: PBO:0030042
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcription_during_vegetative_growth","termid":"PBO:0030042"}


id: PBO:0063368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proprotein convertase subtilisin/kexin type 7","termid":"PBO:0063368"}


id: GO:0009338
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes exonucleolytic cleavage (in the presence of ATP) in either 5' to 3' or 3' to 5' direction to yield 5'-phosphooligonucleotides. Exodeoxyribonuclease V shows a preference for double-stranded DNA and possesses DNA-dependent ATPase activity. It acts endonucleolytically on single-stranded circular DNA.","definition_xrefs":["PMID:1618858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"exodeoxyribonuclease V complex","termid":"GO:0009338"}


id: PBO:0062613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily V member 1","termid":"PBO:0062613"}


id: PBO:0029114
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_process","termid":"PBO:0029114"}


id: PBO:0068969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 213, pseudogene","termid":"PBO:0068969"}


id: PBO:0055109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2527","termid":"PBO:0055109"}


id: GO:0097686
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A horn-shaped dinoflagellate apex found in thecate species.","definition_xrefs":["GOC:at","PMID:7002229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dinoflagellate apex","termid":"GO:0097683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dinoflagellate apical horn","termid":"GO:0097686"}


id: GO:0050413
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,10-methylenetetrahydrofolate + D-alanine + H2O = (6S)-5,6,7,8-tetrahydrofolate + 2-methylserine.","definition_xrefs":["RHEA:10064","EC:2.1.2.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"D-alanine 2-hydroxymethyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01225","MetaCyc:D-ALANINE-HYDROXYMETHYLTRANSFERASE-RXN"],"synonyms":[{"name":"2-methylserine hydroxymethyltransferase activity","type":"related"},{"name":"5,10-methylenetetrahydrofolate:D-alanine 2-hydroxymethyltransferase activity","type":"related"},{"name":"D-alanine hydroxymethyltransferase activity","type":"exact"}],"termid":"GO:0050413"}


id: GO:0004187
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential release of a C-terminal arginine or lysine residue. Function is inhibited by diisopropyl fluorophosphate and sensitive to thiol-blocking reagents.","definition_xrefs":["EC:3.4.16.6"],"gene_count":0,"genotype_count":0,"name":"obsolete carboxypeptidase D activity (obsolete GO:0004187)","synonyms":[{"name":"CPDW-II","type":"related"},{"name":"KEX1 carboxypeptidase activity","type":"related"},{"name":"KEX1 proteinase activity","type":"related"},{"name":"KEX1DELTAp","type":"related"},{"name":"carboxypeptidase D activity","type":"exact"},{"name":"carboxypeptidase KEX1 activity","type":"narrow"},{"name":"carboxypeptidase Kex1","type":"related"},{"name":"carboxypeptidase S1 activity","type":"related"},{"name":"cereal serine carboxypeptidase II","type":"related"},{"name":"gene KEX1 serine carboxypeptidase","type":"narrow"},{"name":"saccharomyces cerevisiae KEX1 gene product","type":"related"}],"termid":"GO:0004187"}


id: PBO:0075033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-44","termid":"PBO:0075033"}


id: PBO:0086431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative integral membrane protein; member of DUP240 gene family; GFP-fusion protein is induced in response to the DNA-damaging agent MMS","termid":"PBO:0086431"}


id: FYPO:0002831
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, begins later than normal during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of protein phosphorylation during vegetative growth","termid":"FYPO:0002830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0002494","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"delayed onset of protein phosphorylation during mitosis","synonyms":[{"name":"delayed onset of protein phosphorylation during mitosis during vegetative growth","type":"exact"},{"name":"delayed onset of protein phosphorylation during mitotic M phase","type":"related"},{"name":"delayed onset of protein phosphorylation during mitotic M-phase","type":"related"},{"name":"delayed onset of protein/peptide phosphorylation during mitosis","type":"exact"},{"name":"delayed protein phosphorylation during mitosis","type":"exact"}],"termid":"FYPO:0002831"}


id: MONDO:0021309
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer that involves the endocervix.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical cancer","termid":"MONDO:0002974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant neoplasm of endocervix","secondary_identifiers":["ICD10CM:C53.0","ICD9:180.0","SCTID:372097009","MEDGEN:56309","UMLS:C0153569","NCIT:C3553"],"synonyms":[{"name":"cancer of endocervix","type":"exact"},{"name":"endocervix cancer","type":"exact"},{"name":"malignant endocervical neoplasm","type":"exact"},{"name":"malignant endocervical tumor","type":"exact"},{"name":"malignant endocervical tumour","type":"exact"},{"name":"malignant endocervix neoplasm","type":"exact"},{"name":"malignant endocervix tumor","type":"exact"},{"name":"malignant endocervix tumour","type":"exact"},{"name":"malignant neoplasm of endocervix","type":"exact"},{"name":"malignant neoplasm of the endocervix","type":"exact"},{"name":"malignant neoplasm of the uterine endocervix","type":"exact"},{"name":"malignant neoplasm of uterine endocervix","type":"exact"},{"name":"malignant tumor of endocervix","type":"exact"},{"name":"malignant tumor of the endocervix","type":"exact"},{"name":"malignant tumor of the uterine endocervix","type":"exact"},{"name":"malignant tumor of uterine endocervix","type":"exact"},{"name":"malignant tumour of endocervix","type":"exact"},{"name":"malignant tumour of the endocervix","type":"exact"},{"name":"malignant tumour of the uterine endocervix","type":"exact"},{"name":"malignant tumour of uterine endocervix","type":"exact"},{"name":"malignant uterine endocervix neoplasm","type":"exact"},{"name":"malignant uterine endocervix tumor","type":"exact"},{"name":"malignant uterine endocervix tumour","type":"exact"}],"termid":"MONDO:0021309","xrefs":{"Monarch":{"xref_id":"0021309"}}}


id: PBO:0062130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily D member 10","termid":"PBO:0062130"}


id: PBO:0079155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSPAN14 antisense RNA 1","termid":"PBO:0079155"}


id: PBO:0086382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ATP-dependent RNA helicase of the DEAD-box family; involved in ribosomal biogenesis; required at post-transcriptional step for efficient retrotransposition; essential for growth under anaerobic conditions","termid":"PBO:0086382"}


id: GO:2000405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of T cell migration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lymphocyte migration","termid":"GO:2000402"},{"relation_name":"is_a","term_name":"regulation of T cell migration","termid":"GO:2000404"},{"relation_name":"negatively_regulates","term_name":"T cell migration","termid":"GO:0072678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of T cell migration","synonyms":[{"name":"negative regulation of T lymphocyte migration","type":"exact"},{"name":"negative regulation of T-cell migration","type":"exact"},{"name":"negative regulation of T-lymphocyte migration","type":"exact"}],"termid":"GO:2000405"}


id: MONDO:0011099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Human HOXA1 syndromes is characterized by deafness, central hypoventilation, congenital ocular paralysis and developmental retardation. Cardiac anomalies and paralysis of the vocal chords may also be present. Six cases have been reported so far. Transmission is thought to be autosomal recessive.","definition_xrefs":["Orphanet:69739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"human HOXA1 syndromes","secondary_identifiers":["SCTID:720518006","MEDGEN:330410","OMIM:601536","DOID:0050682","GARD:8333","UMLS:C1832215"],"synonyms":[{"name":"ABDS","type":"related"},{"name":"ABSD","type":"exact"},{"name":"Athabascan brainstem dysgenesis syndrome","type":"exact"},{"name":"Athabaskan brainstem dysgenesis","type":"related"},{"name":"Athabaskan brainstem dysgenesis syndrome","type":"exact"},{"name":"BSAS","type":"related"},{"name":"Bosley Salih Alorainy syndrome","type":"related"},{"name":"Bosley-Salih-Alorainy syndrome","type":"related"},{"name":"Human HOXA1 syndromes","type":"related"},{"name":"Navajo brainstem syndrome","type":"exact"}],"termid":"MONDO:0011099","xrefs":{"Monarch":{"xref_id":"0011099"}}}


id: PBO:0071902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 40","termid":"PBO:0071902"}


id: PBO:0060803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit S6 pseudogene 1","termid":"PBO:0060803"}


id: PBO:0089720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (m1A) methyltransferase non-catalytic subunit Gcd10","termid":"PBO:0089720"}


id: PBO:0039100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylhomocysteinase pseudogene 4","termid":"PBO:0039100"}


id: GO:0003130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to a receptor on the surface of a target cell, which contributes to heart induction.","definition_xrefs":["GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete BMP signaling pathway involved in heart induction (obsolete GO:0003130)","synonyms":[{"name":"BMP signalling pathway involved in heart induction","type":"exact"}],"termid":"GO:0003130"}


id: MOD:01215
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to O4-(carboxamidomethyl)aspartate.","definition_xrefs":["OMSSA:29","PubMed:16526082","PubMed:11510821","PubMed:12422359","Unimod:4#D"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodoacetamide derivatized residue","termid":"MOD:00397"},{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodoacetamide derivatized aspartic acid","synonyms":[{"name":"Carbamidomethyl","type":"related"},{"name":"Iodoacetamide derivative","type":"related"},{"name":"carbamidomethyld","type":"exact"}],"termid":"MOD:01215"}


id: PBO:0081985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 12","termid":"PBO:0081985"}


id: MONDO:0023657
data:
  {"annotated_genes":["SJAG_03041"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88309],"is_not":false,"summary":null,"term":"MONDO:0023657"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03041":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal dominant 65","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18547","UMLS:C5543371","MEDGEN:1787923","OMIM:619320"],"synonyms":[{"name":"MRD65","type":"exact"},{"name":"mental retardation, autosomal dominant 65","type":"exact"}],"termid":"MONDO:0023657","terms_by_termid":{"MONDO:0023657":null},"xrefs":{"Monarch":{"xref_id":"0023657"}}}


id: PBO:0047339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrillin 1","termid":"PBO:0047339"}


id: GO:0002072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The invagination of the optic vesicle to form two-walled indentations, the optic cups, that will go on to form the retina. This process begins with the optic vesicle becoming a two-walled structure and its subsequent shape changes. It does not include the fate commitment of cells to become the pigmented retina and the neural retina. An example of this process is found in Mus musculus.","definition_xrefs":["GOC:tb","GOC:mtg_sensu","GOC:sdb_2009","GOC:dph","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"part_of","term_name":"embryonic camera-type eye formation","termid":"GO:0060900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optic cup morphogenesis involved in camera-type eye development","synonyms":[{"name":"optic cup morphogenesis involved in camera-style eye development","type":"exact"}],"termid":"GO:0002072"}


id: PATO:0001028
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the rate of change of the bearer's velocity in either speed or direction.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Acceleration"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement quality","termid":"PATO:0001906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acceleration","termid":"PATO:0001028"}


id: GO:1905072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of cardiac jelly over time, from its formation to the mature structure. The cardiac jelly is an acellular gelatinous matrix secreted by the myocardium and plays a central role in the septation of the heart.","definition_xrefs":["PMID:19703439","GOC:BHF","GOC:rl","PMID:16314491","GO_REF:0000094","PMID:10645959","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac jelly development","synonyms":[{"name":"heart cardiac jelly development","type":"exact"}],"termid":"GO:1905072"}


id: GO:0044041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, involving more than one organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism carbohydrate catabolic process (obsolete GO:0044041)","synonyms":[{"name":"multi-organism carbohydrate breakdown","type":"exact"},{"name":"multi-organism carbohydrate catabolism","type":"exact"},{"name":"multi-organism carbohydrate degradation","type":"exact"}],"termid":"GO:0044041"}


id: GO:0046308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of Z-phenylacetaldoxime, a member of the glucosinolate group of compounds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"Z-phenylacetaldoxime metabolic process","termid":"GO:0018983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Z-phenylacetaldoxime catabolic process","synonyms":[{"name":"Z-phenylacetaldoxime breakdown","type":"exact"},{"name":"Z-phenylacetaldoxime catabolism","type":"exact"},{"name":"Z-phenylacetaldoxime degradation","type":"exact"}],"termid":"GO:0046308"}


id: PBO:0088393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyacyl-ACP dehydratase Htd2","termid":"PBO:0088393"}


id: MONDO:0859086
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder, X-linked 110","secondary_identifiers":["MEDGEN:1823954","UMLS:C5774180","OMIM:301095"],"termid":"MONDO:0859086","xrefs":{"Monarch":{"xref_id":"0859086"}}}


id: PBO:0079901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase binding protein","termid":"PBO:0079901"}


id: PBO:0084865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; essential for viability, unlike most other mitoribosomal proteins","termid":"PBO:0084865"}


id: SO:0000322
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of nucleotide sequence targeted by a nuclease enzyme that is found cleaved more than would be expected by chance.","direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease_sensitive_site","termid":"SO:0000684"},{"relation_name":"is_a","term_name":"accessible_DNA_region","termid":"SO:0002331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclease_hypersensitive_site","synonyms":[{"name":"nuclease hypersensitive site","type":"exact"}],"termid":"SO:0000322"}


id: GO:0043732
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-hydroxynicotinate + H2O + O2 = 2,6-dihydroxynicotinate + H2O2.","definition_xrefs":["EC:1.17.3.3","RHEA:22808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, oxygen as acceptor","termid":"GO:0016727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"6-hydroxynicotinate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R07221","MetaCyc:RXN-7585"],"synonyms":[{"name":"6-hydroxynicotinate hydroxylase activity","type":"related"},{"name":"6-hydroxynicotinate:O2 oxidoreductase activity","type":"related"},{"name":"6-hydroxynicotinic acid dehydrogenase activity","type":"related"},{"name":"6-hydroxynicotinic acid hydroxylase activity","type":"related"}],"termid":"GO:0043732"}


id: SO:0100020
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the polypeptide molecule, interacts selectively and non-covalently with DNA.","definition_xrefs":["SO:ke","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_binding_site","termid":"SO:0001429"},{"relation_name":"is_a","term_name":"molecular_contact_region","termid":"SO:0100002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_DNA_contact","synonyms":[{"name":"DNA_bind","type":"exact"},{"name":"polypeptide DNA contact","type":"exact"}],"termid":"SO:0100020"}


id: GO:0005744
data:
  {"annotated_genes":["SJAG_01442","SJAG_04014","SJAG_01597","SJAG_04432","SJAG_04218","SJAG_01879","SJAG_04128","SJAG_02567","SJAG_01120","SJAG_03560","SJAG_02077","SJAG_01615","SJAG_00373"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[61749,68122,71793,76742,77447,78797,80495],"is_not":false,"summary":null,"term":"GO:0005744"},{"annotations":[72828,105102,78461,101053,75758,113650],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0001405"}]},"cv_name":"cellular_component","definition":"The protein transport machinery of the mitochondrial inner membrane that typically transports proteins that possess a matrix-targeting N-terminal presequence. The TIM23 complex contains three essential Tim proteins: Tim17 and Tim23 are thought to build a preprotein translocation channel while Tim44 interacts transiently with the matrix heat-shock protein Hsp70 to form an ATP-driven import motor.","definition_xrefs":["PMID:27554484","PMID:8851659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00373":null,"SJAG_01120":null,"SJAG_01442":null,"SJAG_01597":null,"SJAG_01615":null,"SJAG_01879":null,"SJAG_02077":null,"SJAG_02567":null,"SJAG_03560":null,"SJAG_04014":null,"SJAG_04128":null,"SJAG_04218":null,"SJAG_04432":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005739","GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"TIM23 mitochondrial import inner membrane translocase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"Tim23 complex","type":"exact"},{"name":"mitochondrial inner membrane pre-sequence translocase complex","type":"exact"},{"name":"mitochondrial inner membrane presequence translocase complex","type":"exact"},{"name":"mitochondrial inner membrane translocase complex","type":"broad"}],"termid":"GO:0005744","terms_by_termid":{"GO:0001405":null,"GO:0005744":null}}


id: SO:0001986
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature variant, where the alteration occurs upstream of the transcript TSS.","definition_xrefs":["EBI:gr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intergenic_variant","termid":"SO:0001628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream_transcript_variant","synonyms":[{"name":"upstream transcript variant","type":"exact"}],"termid":"SO:0001986"}


id: GO:0018634
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-pinene + NADH + H+ + O2 = NAD+ + H2O + alpha-pinene oxide.","definition_xrefs":["RHEA:32891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"alpha-pinene monooxygenase (NADH) activity","secondary_identifiers":["EC:1.14.13.155","UM-BBD_reactionID:r0742"],"synonyms":[{"name":"alpha-pinene monooxygenase [NADH] activity","type":"exact"}],"termid":"GO:0018634"}


id: MONDO:0017546
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital vertical talus","termid":"MONDO:0008652"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital vertical talus, unilateral","secondary_identifiers":["GARD:21217","icd11.foundation:2123428798","MEDGEN:1842526","Orphanet:295201","UMLS:C5681089"],"termid":"MONDO:0017546","xrefs":{"Monarch":{"xref_id":"0017546"}}}


id: MONDO:0011647
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An Alzheimer's disease that is characterized by an associated with variation in the region 10p13.","definition_xrefs":["DOID:0110039","PMID:11443525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset autosomal dominant Alzheimer disease","termid":"MONDO:0015140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0000426","MONDO:0005559"],"is_obsolete":false,"name":"Alzheimer disease 7","secondary_identifiers":["MESH:C565251","OMIM:606187","GARD:16510","MEDGEN:342907","UMLS:C1853555"],"synonyms":[{"name":"AD7","type":"exact"},{"name":"Ad7","type":"related"},{"name":"Alzheimer disease 7","type":"exact"},{"name":"Alzheimer disease type 7","type":"exact"},{"name":"Alzheimer disease, familial 7","type":"exact"},{"name":"Alzheimer disease, familial, 7","type":"related"},{"name":"Alzheimer disease-7","type":"exact"},{"name":"Alzheimer's disease 7","type":"exact"},{"name":"Alzheimer's disease type 7","type":"exact"}],"termid":"MONDO:0011647","xrefs":{"Monarch":{"xref_id":"0011647"}}}


id: PBO:0036044
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_transport_along_microtubule_to_cell_tip_cortex_during_vegetative_growth","termid":"PBO:0036044"}


id: PBO:0085699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in retrograde transport to the cis-Golgi network; forms heterodimer with Rgp1p that acts as a GTP exchange factor for Ypt6p; involved in transcription of rRNA and ribosomal protein genes","termid":"PBO:0085699"}


id: PBO:0040221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATCAY kinesin light chain interacting caytaxin","termid":"PBO:0040221"}


id: PBO:0075383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 30","termid":"PBO:0075383"}


id: GO:0015560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (L-idonate or D-gluconate)(out) + H+(out) = (L-iodonate or D-gluconate)(in) + H+(in).","definition_xrefs":["TC:2.A.8.1.2"],"gene_count":0,"genotype_count":0,"name":"obsolete L-idonate/D-gluconate:hydrogen symporter activity (obsolete GO:0015560)","synonyms":[{"name":"L-idonate/D-gluconate:hydrogen symporter activity","type":"exact"},{"name":"L-idonate/D-gluconate:proton symporter","type":"exact"}],"termid":"GO:0015560"}


id: MONDO:0013382
data:
  {"annotated_genes":["SJAG_00835"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88835],"is_not":false,"summary":null,"term":"MONDO:0013382"}]},"cv_name":"mondo","definition":"Progressive polyneuropathy with bilateral striatal necrosis is a rare, genetic disorder of thiamine metabolism and transport characterized by the childhood-onset of recurrent episodes of flaccid paralysis and encephalopathy, associated with bilateral striatal necrosis and chronic progressive axonal polyneuropathy with proximal and distal muscle weakness, areflexia, contractures and foot deformities.","definition_xrefs":["Orphanet:217396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiamine-responsive dysfunction syndrome","termid":"MONDO:0000152"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005066"],"is_obsolete":false,"name":"progressive demyelinating neuropathy with bilateral striatal necrosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:613710","MEDGEN:462323","GARD:17123","UMLS:C3150973"],"synonyms":[{"name":"THMD4","type":"related"},{"name":"bilateral striatal Degeneration and progressive polyneuropathy","type":"related"},{"name":"progressive polyneuropathy with bilateral striatal necrosis","type":"related"},{"name":"striatal Necrosis, bilateral, and progressive polyneuropathy","type":"related"},{"name":"thiamine metabolism dysfunction syndrome 4 (bilateral striatal degeneration and progressive polyneuropathy type)","type":"related"},{"name":"thiamine metabolism dysfunction syndrome 4 (progressive polyneuropathy type)","type":"exact"}],"termid":"MONDO:0013382","terms_by_termid":{"MONDO:0013382":null},"xrefs":{"Monarch":{"xref_id":"0013382"}}}


id: FYPO:0003495
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of azetidine-2-carboxylic acid acetyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"abnormal azetidine-2-carboxylic acid acetyltransferase activity","termid":"FYPO:0003495"}


id: MONDO:0800026
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare disease due to a severely impaired central autonomic control of breathing and dysfunction of the autonomous nervous system. The incidence is estimated to be at 1 of 200 000 livebirths. A heterozygous mutation of PHOX-2B gene is found in 90% of the patients. Association with a Hirschsprung's disease is observed in 16% of the cases. Despite a high mortality rate and a lifelong dependence to mechanical ventilation, the long-term outcome of CCHS should be ultimately improved by multidisciplinary and coordinated follow-up of the patients.","definition_xrefs":["Orphanet:661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autonomic nervous system disorder","termid":"MONDO:0001292"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"neurocristopathy","termid":"MONDO:0021635"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"},{"relation_name":"is_a","term_name":"central hypoventilation syndrome, congenital","termid":"MONDO:0800031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"central hypoventilation syndrome, congenital, 1, with or without Hirschsprung disease","secondary_identifiers":["GARD:8535","DOID:0060731","NCIT:C98889","SCTID:230499002","MedDRA:10007982","OMIM:209880","MEDGEN:1794285","UMLS:C5562075","icd11.foundation:1750742010","ICD10CM:G47.3","MedDRA:10066131"],"synonyms":[{"name":"CCHS","type":"exact"},{"name":"CCHS with Hirschsprung disease","type":"related"},{"name":"Haddad syndrome","type":"related"},{"name":"Ondine curse","type":"exact"},{"name":"Ondine curse (formerly)","type":"related"},{"name":"Ondine curse, congenital","type":"exact"},{"name":"Ondine syndrome","type":"exact"},{"name":"Ondine's curse (formerly)","type":"related"},{"name":"Ondine-Hirschsprung disease","type":"related"},{"name":"autonomic control, congenital failure of","type":"exact"},{"name":"central congenital hypoventilation syndrome","type":"exact"},{"name":"central hypoventilation syndrome, congenital","type":"related"},{"name":"congenital Ondine curse","type":"exact"},{"name":"congenital central alveolar hypoventilation syndrome","type":"exact"},{"name":"congenital central hypoventilation","type":"exact"},{"name":"congenital central hypoventilation syndrome","type":"exact"},{"name":"congenital failure of autonomic control","type":"related"},{"name":"idiopathic congenital central alveolar hypoventilation","type":"related"},{"name":"primary alveolar hypoventilation","type":"related"}],"termid":"MONDO:0800026","xrefs":{"Monarch":{"xref_id":"0800026"}}}


id: MONDO:0030270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic malformation","termid":"MONDO:0019313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphatic malformation 9","secondary_identifiers":["MEDGEN:1779656","UMLS:C5543365","OMIM:619319"],"synonyms":[{"name":"LMPHM9","type":"exact"},{"name":"lymphatic malformation 9","type":"exact"}],"termid":"MONDO:0030270","xrefs":{"Monarch":{"xref_id":"0030270"}}}


id: GO:0006172
data:
  {"annotated_genes":["SJAG_02038"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73640],"is_not":false,"summary":null,"term":"GO:0006172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ADP, adenosine 5'-diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"purine ribonucleoside diphosphate biosynthetic process","termid":"GO:0009180"},{"relation_name":"is_a","term_name":"ADP metabolic process","termid":"GO:0046031"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02038":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ADP biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"ADP anabolism","type":"exact"},{"name":"ADP biosynthesis","type":"exact"},{"name":"ADP formation","type":"exact"},{"name":"ADP synthesis","type":"exact"}],"termid":"GO:0006172","terms_by_termid":{"GO:0006172":null}}


id: PBO:0001837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human FAM32A homolog","termid":"PBO:0001837"}


id: GO:1900122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a protein or other molecule binding to a receptor.","definition_xrefs":["GOC:signaling","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein binding","termid":"GO:0032092"},{"relation_name":"is_a","term_name":"regulation of receptor binding","termid":"GO:1900120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of receptor binding","synonyms":[{"name":"activation of receptor binding","type":"narrow"},{"name":"up regulation of receptor binding","type":"exact"},{"name":"upregulation of receptor binding","type":"exact"}],"termid":"GO:1900122"}


id: GO:1900947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of isoprene biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"is_a","term_name":"regulation of olefin biosynthetic process","termid":"GO:1900911"},{"relation_name":"is_a","term_name":"regulation of isoprene metabolic process","termid":"GO:1900944"},{"relation_name":"regulates","term_name":"isoprene biosynthetic process","termid":"GO:0043612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of isoprene biosynthetic process","synonyms":[{"name":"regulation of 2-methyl-1,3-butadiene biosynthesis","type":"exact"},{"name":"regulation of 2-methyl-1,3-butadiene biosynthetic process","type":"exact"},{"name":"regulation of hemiterpene biosynthesis","type":"exact"},{"name":"regulation of hemiterpene biosynthetic process","type":"exact"}],"termid":"GO:1900947"}


id: GO:0036106
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a class II peroxisomal membrane targeting sequence, any of several sequences of amino acids within a protein that can act as a signal for the localization of the protein into the peroxisome membrane in a PEX19-independent manner.","definition_xrefs":["GOC:pm","PMID:14709540","PMID:17020786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome membrane targeting sequence binding","termid":"GO:0033328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005048"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005048"],"is_obsolete":false,"name":"peroxisome membrane class-2 targeting sequence binding","synonyms":[{"name":"PEX19-independent mPTS binding","type":"related"},{"name":"class 2 mPTS binding","type":"exact"}],"termid":"GO:0036106"}


id: GO:0010264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phytic acid, myo-inositol hexakisphosphate, a regulator of intracellular signaling, a highly abundant animal anti-nutrient and a phosphate and mineral storage compound in plant seeds.","definition_xrefs":["PMID:16107538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphate biosynthetic process","termid":"GO:0032958"},{"relation_name":"is_a","term_name":"myo-inositol hexakisphosphate metabolic process","termid":"GO:0033517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"myo-inositol hexakisphosphate biosynthetic process","synonyms":[{"name":"myo-inositol hexakisphosphate anabolism","type":"exact"},{"name":"myo-inositol hexakisphosphate biosynthesis","type":"exact"},{"name":"myo-inositol hexakisphosphate formation","type":"exact"},{"name":"myo-inositol hexakisphosphate synthesis","type":"exact"},{"name":"phytate biosynthesis","type":"exact"},{"name":"phytate biosynthetic process","type":"exact"}],"termid":"GO:0010264"}


id: GO:0051190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a prosthetic group, the non-amino acid portion of certain protein molecules. Prosthetic groups may be inorganic or organic and are usually required for the biological activity of the protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"prosthetic group metabolic process","termid":"GO:0051189"},{"relation_name":"part_of","term_name":"protein catabolic process","termid":"GO:0030163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"prosthetic group catabolic process","synonyms":[{"name":"coenzyme and prosthetic group catabolic process","type":"broad"},{"name":"coenzyme and prosthetic group catabolism","type":"broad"},{"name":"prosthetic group breakdown","type":"exact"},{"name":"prosthetic group catabolism","type":"exact"},{"name":"prosthetic group degradation","type":"exact"}],"termid":"GO:0051190"}


id: MONDO:1011232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Entropion that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"entropion, non-human animal","termid":"MONDO:1010323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"entropion, rabbit","secondary_identifiers":["OMIA:000337-9986"],"termid":"MONDO:1011232","xrefs":{"Monarch":{"xref_id":"1011232"}}}


id: PBO:0089230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clustered mitochondria ortholog Clu1","termid":"PBO:0089230"}


id: PBO:0070922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 30","termid":"PBO:0070922"}


id: MONDO:0859046
data:
  {"annotated_genes":["SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88741],"is_not":false,"summary":null,"term":"MONDO:0859046"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"rhabdomyosarcoma","termid":"MONDO:0005212"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"rhabdomyosarcoma, embryonal, 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:180295","UMLS:C1867234","MEDGEN:357232"],"termid":"MONDO:0859046","terms_by_termid":{"MONDO:0859046":null},"xrefs":{"Monarch":{"xref_id":"0859046"}}}


id: PBO:0117379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HemK methyltransferase 2, ETF1 glutamine and histone H4 lysine","termid":"PBO:0117379"}


id: MONDO:0006700
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the optic choroid.","direct_ancestors":[{"relation_name":"is_a","term_name":"vascular cancer","termid":"MONDO:0002095"},{"relation_name":"is_a","term_name":"uveal cancer","termid":"MONDO:0002659"},{"relation_name":"is_a","term_name":"choroid neoplasm","termid":"MONDO:0021258"},{"relation_name":"is_a","term_name":"neurovascular disorder","termid":"MONDO:0043218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"choroid cancer","secondary_identifiers":["MESH:D002830","SCTID:363466008","UMLS:C0153630","ICD10CM:C69.3","MedDRA:10057405","NCIT:C3566","DOID:12759","ICD9:190.6","MEDGEN:57794"],"synonyms":[{"name":"cancer of optic choroid","type":"exact"},{"name":"choroid neoplasm","type":"broad"},{"name":"choroidal tumor","type":"broad"},{"name":"choroidal tumour","type":"broad"},{"name":"malignant choroid neoplasm","type":"exact"},{"name":"malignant choroid tumor","type":"exact"},{"name":"malignant choroid tumour","type":"exact"},{"name":"malignant neoplasm of choroid","type":"exact"},{"name":"malignant neoplasm of optic choroid","type":"exact"},{"name":"malignant neoplasm of the choroid","type":"exact"},{"name":"malignant optic choroid neoplasm","type":"exact"},{"name":"malignant tumor of choroid","type":"exact"},{"name":"malignant tumor of the choroid","type":"exact"},{"name":"malignant tumour of choroid","type":"exact"},{"name":"malignant tumour of the choroid","type":"exact"},{"name":"optic choroid cancer","type":"exact"}],"termid":"MONDO:0006700","xrefs":{"Monarch":{"xref_id":"0006700"}}}


id: PBO:0058549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6128","termid":"PBO:0058549"}


id: PATO:0002077
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being positioned with multiple entities of the same type above and below.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stacked","termid":"PATO:0002077"}


id: _global:negatively_regulates_characteristic
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A relationship that holds between a process and a characteristic in which process (P) negatively regulates characteristic (C) iff: P results in a decrease in the intensity or magnitude of C.","direct_ancestors":[{"relation_name":"is_a","term_name":"regulates_characteristic","termid":"_global:regulates_characteristic"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negatively_regulates_characteristic","secondary_identifiers":["RO:0019002"],"termid":"_global:negatively_regulates_characteristic"}


id: GO:0075260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of spore-bearing organ development, a process in which hyphae grow into special aggregates called fruiting bodies that produce new spores.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of spore-bearing organ development","termid":"GO:0075260"}


id: PBO:0038435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylacetamide deacetylase like 2","termid":"PBO:0038435"}


id: PBO:0004486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"16 small nucleolar RNA","termid":"PBO:0004486"}


id: GO:0015053
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Hydrophobic glycoprotein to which 11-cis-retinal binds as a Schiff base (in rhodopsin) or 3,4-didehydro-11-cis-retinal binds as a Schiff base in cyanopsin and porphyropsin.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete opsin (obsolete GO:0015053)","synonyms":[{"name":"opsin","type":"exact"}],"termid":"GO:0015053"}


id: GO:1901745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving prephenate(2-).","definition_xrefs":["PMID:16752890","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"prephenate(2-) metabolic process","synonyms":[{"name":"prephenate metabolism","type":"exact"},{"name":"prephenate(2-) metabolism","type":"exact"}],"termid":"GO:1901745"}


id: GO:1903882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of interleukin-17-mediated signaling pathway.","definition_xrefs":["GOC:krc","GOC:TermGenie","PMID:20054338","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"regulation of interleukin-17-mediated signaling pathway","termid":"GO:1903881"},{"relation_name":"negatively_regulates","term_name":"interleukin-17-mediated signaling pathway","termid":"GO:0097400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-17-mediated signaling pathway","synonyms":[{"name":"down regulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"down regulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"down regulation of interleukin-17-mediated signaling pathway","type":"exact"},{"name":"down regulation of interleukin-17-mediated signalling pathway","type":"exact"},{"name":"down-regulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"down-regulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"down-regulation of interleukin-17-mediated signaling pathway","type":"exact"},{"name":"down-regulation of interleukin-17-mediated signalling pathway","type":"exact"},{"name":"downregulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"downregulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"downregulation of interleukin-17-mediated signaling pathway","type":"exact"},{"name":"downregulation of interleukin-17-mediated signalling pathway","type":"exact"},{"name":"inhibition of IL-17-mediated signaling pathway","type":"narrow"},{"name":"inhibition of IL-17-mediated signalling pathway","type":"narrow"},{"name":"inhibition of interleukin-17-mediated signaling pathway","type":"narrow"},{"name":"inhibition of interleukin-17-mediated signalling pathway","type":"narrow"},{"name":"negative regulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"negative regulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"negative regulation of interleukin-17-mediated signalling pathway","type":"exact"}],"termid":"GO:1903882"}


id: PBO:0062058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily W member 5 pseudogene","termid":"PBO:0062058"}


id: PBO:0070163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 77 pseudogene","termid":"PBO:0070163"}


id: PBO:0079316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 8","termid":"PBO:0079316"}


id: MONDO:0010288
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Adrenomyodystrophy is an extremely rare genetic endocrine disease characterized by primary adrenal insufficiency, dystrophic myopathy, hepatic steatosis, severe psychomotor delay, megalocornea, failure to thrive, chronic constipation, and terminal bladder ectasia which can lead to death. There have been no further descriptions in the literature since 1982.","definition_xrefs":["Orphanet:977"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"chronic primary adrenal insufficiency","termid":"MONDO:0015129"},{"relation_name":"is_a","term_name":"adrenal gland disorder","termid":"MONDO:0005495"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenomyodystrophy","secondary_identifiers":["GARD:562","icd11.foundation:46666832","MESH:C538051","OMIM:300270","MEDGEN:337494","SCTID:763311001","UMLS:C1846044"],"synonyms":[{"name":"adrenomyodystrophy","type":"exact"}],"termid":"MONDO:0010288","xrefs":{"Monarch":{"xref_id":"0010288"}}}


id: MONDO:0017313
data:
  {"annotated_genes":["SJAG_01466","SJAG_03712","SJAG_01616","SJAG_03447"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009238"},{"annotations":[87055,87054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009353"},{"annotations":[87891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032705"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of vitamin and non-protein cofactor absorption and transport","termid":"MONDO:0017758"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01466":null,"SJAG_01616":null,"SJAG_03447":null,"SJAG_03712":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of folate metabolism and transport","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1842423","icd11.foundation:2081529009","UMLS:C5681010","Orphanet:285657","GARD:21131"],"termid":"MONDO:0017313","terms_by_termid":{"MONDO:0009238":null,"MONDO:0009353":null,"MONDO:0032705":null},"xrefs":{"Monarch":{"xref_id":"0017313"}}}


id: PBO:0026899
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_nitrogen_starvation","termid":"PBO:0026899"}


id: FYPO:0008379
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a lower extent than normal during a cellular response to nitrogen starvation. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be decreased.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0002494","FYPO:0000002","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"decreased histone H2A phosphorylation during nitrogen starvation","termid":"FYPO:0008379"}


id: PBO:0005554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar sorting protein Vps60 (predicted)","termid":"PBO:0005554"}


id: GO:0003093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glomerular filtration. Glomerular filtration is the process in which blood is filtered by the glomerulus into the renal tubule.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system process involved in regulation of blood volume","termid":"GO:0001977"},{"relation_name":"is_a","term_name":"regulation of renal system process","termid":"GO:0098801"},{"relation_name":"regulates","term_name":"glomerular filtration","termid":"GO:0003094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of glomerular filtration","termid":"GO:0003093"}


id: PR:Q9P777
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histidinol dehydrogenase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03156","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidinol dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.13","secondary_identifiers":["UniProtKB:Q9P777"],"synonyms":[{"name":"HDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-hisD","type":"exact"}],"termid":"PR:Q9P777"}


id: PBO:0058567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6509","termid":"PBO:0058567"}


id: GO:1990546
data:
  {"annotated_genes":["SJAG_01872","SJAG_00275"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74284,73418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006843"}]},"cv_name":"biological_process","definition":"The process in which a tricarboxylic acid is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylic acid transmembrane transport","termid":"GO:0035674"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00275":null,"SJAG_01872":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"mitochondrial tricarboxylic acid transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:1990546","terms_by_termid":{"GO:0006843":null}}


id: PBO:0044915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol O-acyltransferase 2 like 6","termid":"PBO:0044915"}


id: FYPO:0006157
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of oxidation of one or more specific proteins, or of specific protein sites is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of protein oxidation during vegetative growth","synonyms":[{"name":"increased duration of protein oxidation during mitotic cell cycle","type":"related"},{"name":"prolonged protein oxidation during vegetative growth","type":"exact"}],"termid":"FYPO:0006157"}


id: PBO:0087571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TFIIH and nucleotide excision repair factor 3 complexes; required for nucleotide excision repair, target for transcriptional activators; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087571"}


id: MONDO:0007610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gingival fibromatosis - hypertrichosis syndrome is a rare autosomal dominant disorder characterized by a generalized enlargement of the gingiva occurring at birth or during childhood that is associated with generalized hypertrichosis developing at birth, during the first years of life, or at puberty and predominantly affecting the face, upper limbs, and midback.","definition_xrefs":["Orphanet:2026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrichosis","termid":"MONDO:0019280"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"gingival fibromatosis-hypertrichosis syndrome","secondary_identifiers":["GARD:2324","OMIM:135400","UMLS:C1851120","MEDGEN:342675","MESH:C565016","SCTID:716008002"],"synonyms":[{"name":"CGHT","type":"exact"},{"name":"HTC3","type":"related"},{"name":"chromosome 17Q24.2-q24.3 Duplication syndrome","type":"related"},{"name":"chromosome 17Q24.2-q24.3 deletion syndrome","type":"related"},{"name":"congenital generalised hypertrichosis terminalis","type":"exact"},{"name":"congenital generalized hypertrichosis terminalis","type":"exact"},{"name":"extreme hirsutism with gingival fibromatosis","type":"related"},{"name":"fibromatosis, gingival, with hypertrichosis","type":"related"},{"name":"gingival fibromatosis with hypertrichosis","type":"related"},{"name":"hereditary gingival fibromatosis with hypertrichosis","type":"related"},{"name":"hirsutism-congenital gingival hyperplasia syndrome","type":"exact"},{"name":"hypertrichosis terminalis, generalized, with gingival hyperplasia","type":"related"},{"name":"hypertrichosis terminalis, generalized, with or without gingival hyperplasia","type":"related"},{"name":"hypertrichosis with or without gingival hyperplasia","type":"exact"},{"name":"hypertrichosis, congenital generalized, with gingival hyperplasia","type":"exact"},{"name":"hypertrichosis, congenital generalized, with or without gingival hyperplasia","type":"related"},{"name":"microdeletion 17Q24.2-q24.3 syndrome","type":"related"},{"name":"microduplication 17Q24.2-q24.3 syndrome","type":"related"}],"termid":"MONDO:0007610","xrefs":{"Monarch":{"xref_id":"0007610"}}}


id: GO:0033313
data:
  {"annotated_genes":["SJAG_03438","SJAG_04259","SJAG_01330","SJAG_02771","SJAG_04126","SJAG_01680","SJAG_04287","SJAG_03026","SJAG_01082","SJAG_01837","SJAG_00364","SJAG_03327"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108146,116356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[80681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044778"},{"annotations":[108447,117917,93242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033315"},{"annotations":[117918,108448,116119,90874],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051598"},{"annotations":[118529,77119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[115646],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[103158],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"A signaling process that contributes to a meiotic cell cycle checkpoint that ensures accurate chromosome replication and segregation by preventing progression through a meiotic cell cycle until conditions are suitable for the cell to proceed to the next stage.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle checkpoint signaling","termid":"GO:0000075"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_01082":null,"SJAG_01330":null,"SJAG_01680":null,"SJAG_01837":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03327":null,"SJAG_03438":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0023052","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"meiotic cell cycle checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0072411"],"synonyms":[{"name":"meiotic cell cycle checkpoint","type":"exact"},{"name":"signal transduction involved in meiotic cell cycle checkpoint","type":"exact"}],"termid":"GO:0033313","terms_by_termid":{"GO:0033315":null,"GO:0033316":null,"GO:0044778":null,"GO:0051598":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: PR:Q9C0Z9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase III subunit RPC9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR15561:SF0","OMA:SCHPO01381","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III subunit rpc9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1E7.10","secondary_identifiers":["UniProtKB:Q9C0Z9"],"synonyms":[{"name":"RNA polymerase III subunit C17 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CRCP","type":"exact"}],"termid":"PR:Q9C0Z9"}


id: GO:0071658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of IP-10.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"regulates","term_name":"IP-10 production","termid":"GO:0071612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of IP-10 production","synonyms":[{"name":"regulation of CXCL10 production","type":"exact"},{"name":"regulation of chemokine (C-C motif) ligand 10 production","type":"exact"}],"termid":"GO:0071658"}


id: PBO:0050293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatocyte nuclear factor 4 gamma pseudogene 1","termid":"PBO:0050293"}


id: GO:0010801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of peptidyl-threonine phosphorylation. Peptidyl-threonine phosphorylation is the phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein phosphorylation","termid":"GO:0001933"},{"relation_name":"is_a","term_name":"regulation of peptidyl-threonine phosphorylation","termid":"GO:0010799"},{"relation_name":"negatively_regulates","term_name":"peptidyl-threonine phosphorylation","termid":"GO:0018107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peptidyl-threonine phosphorylation","termid":"GO:0010801"}


id: PBO:0074080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A51 pseudogene 4","termid":"PBO:0074080"}


id: PATO:0002307
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A triangular quality inhering in a bearer by virtue of the bearer's having two sides have the same length.","definition_xrefs":["PATOC:JB"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triangular","termid":"PATO:0001875"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isosceles triangular","termid":"PATO:0002307"}


id: PBO:0066973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 276","termid":"PBO:0066973"}


id: PBO:0069869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1156, pseudogene","termid":"PBO:0069869"}


id: MONDO:0800134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An immunodeficiency disease caused by a variation in the CRACR2A gene.","definition_xrefs":["PMID:35151051","PMID:34908525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"primary immunodeficiency due to calcium channel deficiency","termid":"MONDO:0800134","xrefs":{"Monarch":{"xref_id":"0800134"}}}


id: PR:O43089
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cbp6 gene.","definition_xrefs":["UniProtKB:O43089","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome B pre-mRNA-processing protein 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC947.14c","synonyms":[{"name":"Spom972h-cbp6","type":"exact"}],"termid":"PR:O43089"}


id: GO:1900719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of uterine smooth muscle relaxation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of relaxation of smooth muscle","termid":"GO:1901080"},{"relation_name":"regulates","term_name":"uterine smooth muscle relaxation","termid":"GO:0044558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of uterine smooth muscle relaxation","synonyms":[{"name":"regulation of smooth muscle relaxation of the uterus","type":"exact"}],"termid":"GO:1900719"}


id: FYPO:0002979
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is normal (i.e. indistinguishable from wild type) during a cellular response to methyl methanesulfonate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to chromatin during cellular response to methyl methanesulfonate","synonyms":[{"name":"normal protein localisation to chromatin during cellular response to methyl methanesulfonate","type":"exact"},{"name":"normal protein localization to chromatin during cellular response to MMS","type":"exact"},{"name":"normal protein localization to chromatin during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin during cellular response to methyl methanesulphonate","type":"exact"}],"termid":"FYPO:0002979"}


id: SO:0001384
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A portion of a CDS that is not the complete CDS.","direct_ancestors":[{"relation_name":"has_quality","term_name":"fragmentary","termid":"SO:0000731"},{"relation_name":"is_a","term_name":"CDS","termid":"SO:0000316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDS_fragment","synonyms":[{"name":"CDS fragment","type":"exact"},{"name":"incomplete CDS","type":"exact"}],"termid":"SO:0001384"}


id: PBO:0053588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 613","termid":"PBO:0053588"}


id: GO:0051454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the internal pH of a cell, measured by the concentration of the hydrogen ion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular pH","termid":"GO:0051453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular pH elevation","synonyms":[{"name":"cell pH elevation","type":"exact"},{"name":"cellular alkalinization","type":"exact"},{"name":"elevation of cellular pH","type":"exact"},{"name":"intracellular alkalinization","type":"exact"},{"name":"pH elevation in cell","type":"exact"}],"termid":"GO:0051454"}


id: PBO:0068601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 52, pseudogene","termid":"PBO:0068601"}


id: GO:1900730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of adenylate cyclase-inhibiting opioid receptor signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:17157995","GOC:sjw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of adenylate cyclase-inhibiting opioid receptor signaling pathway","termid":"GO:1900729"},{"relation_name":"is_a","term_name":"negative regulation of opioid receptor signaling pathway","termid":"GO:2000475"},{"relation_name":"negatively_regulates","term_name":"adenylate cyclase-inhibiting opioid receptor signaling pathway","termid":"GO:0031635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of adenylate cyclase-inhibiting opioid receptor signaling pathway","synonyms":[{"name":"down regulation of adenylate cyclase-inhibiting opioid receptor signaling pathway","type":"exact"},{"name":"down-regulation of adenylate cyclase-inhibiting opioid receptor signaling pathway","type":"exact"},{"name":"downregulation of adenylate cyclase-inhibiting opioid receptor signaling pathway","type":"exact"},{"name":"inhibition of adenylate cyclase-inhibiting opioid receptor signaling pathway","type":"narrow"},{"name":"inhibition of opioid receptor-mediated adenylate cyclase inhibition","type":"related"},{"name":"negative regulation of inhibition of adenylate cyclase activity by opioid receptor signaling pathway","type":"related"},{"name":"negative regulation of inhibition of adenylate cyclase activity by opioid receptor signalling pathway","type":"related"}],"termid":"GO:1900730"}


id: SO:0001101
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the polypeptide molecule, interacts selectively and non-covalently with nickel ions.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_metal_contact","termid":"SO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_nickel_ion_contact_site","secondary_identifiers":["BS:00142"],"synonyms":[{"name":"Ni_contact_site","type":"exact"},{"name":"polypeptide nickel ion contact site","type":"exact"}],"termid":"SO:0001101"}


id: PBO:0052983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte activating 3","termid":"PBO:0052983"}


id: GO:0036498
data:
  {"annotated_genes":["SJAG_04435","SJAG_00790"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68080,94910],"is_not":false,"summary":null,"term":"GO:0036498"}]},"cv_name":"biological_process","definition":"The series of molecular signals mediated by the endoplasmic reticulum stress sensor IRE1 (Inositol-requiring transmembrane kinase/endonuclease). Begins with activation of IRE1 in response to endoplasmic reticulum (ER) stress, and ends with regulation of a downstream cellular process, e.g. transcription. One target of activated IRE1 is the transcription factor HAC1 in yeast, or XBP1 in mammals; IRE1 cleaves an intron of a mRNA coding for HAC1/XBP1 to generate an activated HAC1/XBP1 transcription factor, which controls the up regulation of UPR-related genes. At least in mammals, IRE1 can also signal through additional intracellular pathways including JNK and NF-kappaB.","definition_xrefs":["GOC:PARL","GOC:bf","PMID:22013210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum unfolded protein response","termid":"GO:0030968"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00790":null,"SJAG_04435":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"IRE1-mediated unfolded protein response","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-381070"],"synonyms":[{"name":"ERN1-mediated unfolded protein response","type":"related"},{"name":"IRE1 branch of UPR","type":"exact"},{"name":"IRE1 signal transduction pathway","type":"broad"},{"name":"IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"IRE1alpha unfolded protein response","type":"narrow"},{"name":"IRE1p unfolded protein response","type":"narrow"},{"name":"UPR signaling by IRE1 stress sensor","type":"exact"},{"name":"endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"exact"},{"name":"inositol-requiring enzyme 1-mediated unfolded protein response","type":"related"},{"name":"inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"}],"termid":"GO:0036498","terms_by_termid":{"GO:0036498":null}}


id: MONDO:0017417
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, developmental defect during embryogenesis syndrome characterized by the triad of pancreatic fibrosis (and cysts, with a reduction of parenchymal tissue), renal dysplasia (with peripheral cortical cysts, primitive collecting ducts, glomerular cysts and metaplastic cartilage) and hepatic dysgenesis (enlarged portal areas containing numerous elongated binary profiles with a tendency to perilobular fibrosis). Situs abnormalities, skeletal anomalies and anencephaly have also been associated. Patients that survive the neonatal period present renal insufficiency, chronic jaundice and insulin-dependant diabetes.","definition_xrefs":["Orphanet:294415"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic visceral malformation (obsolete MONDO:0015214)","termid":"MONDO:0015214"},{"relation_name":"excluded_subClassOf","term_name":"familial cystic renal disease","termid":"MONDO:0019741"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal-hepatic-pancreatic dysplasia","secondary_identifiers":["UMLS:C2673883","GARD:17356","DOID:0060259","OMIMPS:208540","SCTID:763891005","MEDGEN:382215"],"synonyms":[{"name":"Ivemark II syndrome","type":"exact"},{"name":"Ivemark's syndrome","type":"exact"},{"name":"Renohepaticopancreatic dysplasia","type":"exact"}],"termid":"MONDO:0017417","xrefs":{"Monarch":{"xref_id":"0017417"}}}


id: PBO:0034212
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_model","termid":"PBO:0034212"}


id: GO:1903544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a butyrate stimulus.","definition_xrefs":["GOC:TermGenie","GOC:mr","PMID:9734870","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fatty acid","termid":"GO:0070542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to butyrate","termid":"GO:1903544"}


id: PATO:0001062
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001062 absolute elasticity (obsolete PATO:0001062)","termid":"PATO:0001062"}


id: MONDO:0020317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute myeloid leukemia associated with t(9;11)(p22.3;q23.3) and MLLT3-KMT2A fusion protein expression. Morphologically it usually has monocytic features. It may present at any age but it is more commonly seen in children. Patients may present with disseminated intravascular coagulation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"acute myeloid leukemia with 11q23 abnormalities","secondary_identifiers":["Orphanet:98831","UMLS:C1292775","GARD:19587","MEDGEN:266234","SCTID:444911000","ICDO:9897/3","NCIT:C82403"],"synonyms":[{"name":"AML with 11q23 abnormalities","type":"exact"},{"name":"AML with t(9;11)(p22;q23); MLLT3-MLL","type":"exact"},{"name":"acute myeloid Leukaemia with t(9;11)(p21.3;q23.3); MLLT3-KMT2A","type":"exact"},{"name":"acute myeloid Leukemia with t(9;11)(p21.3;q23.3); MLLT3-KMT2A","type":"exact"},{"name":"acute myeloid leukaemia with 11q23 (MLL) abnormalities","type":"exact"},{"name":"acute myeloid leukaemia with MLL abnormalities","type":"exact"},{"name":"acute myeloid leukaemia with t(9;11)(p22.3;q23.3); MLLT3-KMT2A","type":"exact"},{"name":"acute myeloid leukaemia with t(9;11)(p22;q23); MLLT3-MLL","type":"exact"},{"name":"acute myeloid leukemia with 11q23 (MLL) abnormalities","type":"exact"},{"name":"acute myeloid leukemia with MLL abnormalities","type":"exact"},{"name":"acute myeloid leukemia with t(9;11)(p22.3;q23.3); MLLT3-KMT2A","type":"exact"},{"name":"acute myeloid leukemia with t(9;11)(p22;q23); MLLT3-MLL","type":"exact"}],"termid":"MONDO:0020317","xrefs":{"Monarch":{"xref_id":"0020317"}}}


id: GO:0004525
data:
  {"annotated_genes":["SJAG_04527","SJAG_03689","SJAG_04019","SJAG_01463","SJAG_02156"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60095,61001,69241,75293,78435],"is_not":false,"summary":null,"term":"GO:0004525"}]},"cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of RNA with 5'-phosphomonoesters and 3'-OH termini; makes two staggered cuts in both strands of dsRNA, leaving a 3' overhang of 2 nt.","definition_xrefs":["PMID:15242644","PMID:11157775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity producing 5'-phosphomonoesters, hydrolytic mechanism","termid":"GO:0016891"},{"relation_name":"is_a","term_name":"double-stranded RNA-specific ribonuclease activity","termid":"GO:0032296"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01463":null,"SJAG_02156":null,"SJAG_03689":null,"SJAG_04019":null,"SJAG_04527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0003674","GO:0140098"],"is_obsolete":false,"name":"ribonuclease III activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-426464","Reactome:R-HSA-9708292","Reactome:R-HSA-9708408","Reactome:R-HSA-9820840","Reactome:R-HSA-203862","Reactome:R-HSA-203893","EC:3.1.26.3","MetaCyc:3.1.26.3-RXN"],"synonyms":[{"name":"RNase III activity","type":"related"},{"name":"pre-mRNA 3'-end processing endonuclease","type":"narrow"},{"name":"ribonuclease 3 activity","type":"related"}],"termid":"GO:0004525","terms_by_termid":{"GO:0004525":null}}


id: FYPO:0003723
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of bis(5'-adenosyl)-hexaphosphatase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"abnormal bis(5'-adenosyl)-hexaphosphatase activity","termid":"FYPO:0003723"}


id: GO:0070799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of conidiophore stalk development, a process that leads to the formation of a conidiophore stalk. The conidiophore stalk is part of a specialized hypha that extends aerially from the growth substrate and supports structures from which conidia, or asexual spores, develop.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"conidiophore stalk development","termid":"GO:0070788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of conidiophore stalk development","termid":"GO:0070799"}


id: PBO:0056961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 22","termid":"PBO:0056961"}


id: GO:0021943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of scaffolds from a radial glial cell. The scaffolds are used as a substrate for the radial migration of cells.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph","PMID:15157725","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"part_of","term_name":"hindbrain radial glia guided cell migration","termid":"GO:0021932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of radial glial scaffolds","synonyms":[{"name":"Bergmann fiber biosynthesis","type":"related"},{"name":"Bergmann fiber formation","type":"related"}],"termid":"GO:0021943"}


id: MONDO:0017398
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"3MC syndrome describes a rare developmental disorder, that unifies the overlapping autosomal recessive disorders previously known as Carnevale, Mingarelli, Malpuech and Michels syndromes, characterized by a spectrum of developmental anomalies that include distinctive facial dysmorphism (i.e. hypertelorism, blepharophimosis, blepharoptosis, highly arched eyebrows), cleft lip and/or palate, craniosynostosis, learning disability, radioulnar synostosis and genital and vesicorenal anomalies. Less common features reported include anterior chamber defects, cardiac anomalies (e.g. ventricular septal defect), caudal appendage, umbilical hernia/omphalocele and diastasis recti.","definition_xrefs":["Orphanet:293843"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3MC syndrome","secondary_identifiers":["OMIMPS:257920","DOID:0060225","icd11.foundation:1294329406","MEDGEN:929529","UMLS:C4303860","SCTID:720756005","GARD:1118","NANDO:2200792"],"synonyms":[{"name":"Malpuech-Michels-Mingarelli-Carnevale syndrome","type":"exact"},{"name":"craniofacial-ulnar-renal syndrome","type":"exact"},{"name":"oculopalatoskeletal syndrome","type":"exact"}],"termid":"MONDO:0017398","xrefs":{"Monarch":{"xref_id":"0017398"}}}


id: GO:2001300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a lipoxin. A lipoxin is a non-classic eicosanoid and signaling molecule that has four conjugated double bonds and is derived from arachidonic acid.","definition_xrefs":["GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid derivative metabolic process","termid":"GO:1901568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lipoxin metabolic process","synonyms":[{"name":"lipoxin metabolism","type":"exact"}],"termid":"GO:2001300"}


id: PBO:0040070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin beta 1","termid":"PBO:0040070"}


id: MONDO:0003013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pseudohypoaldosteronism (obsolete MONDO:0003013)","termid":"MONDO:0003013","xrefs":{"Monarch":{"xref_id":"0003013"}}}


id: GO:0050727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the inflammatory response, the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"regulates","term_name":"inflammatory response","termid":"GO:0006954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of inflammatory response","termid":"GO:0050727"}


id: GO:1901263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sorocarp spore cell differentiation.","definition_xrefs":["GOC:TermGenie","GOC:rjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of sorocarp spore cell differentiation","termid":"GO:1901261"},{"relation_name":"positively_regulates","term_name":"sorocarp spore cell differentiation","termid":"GO:0044671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sorocarp spore cell differentiation","synonyms":[{"name":"activation of sorocarp spore cell differentiation","type":"narrow"},{"name":"up regulation of sorocarp spore cell differentiation","type":"exact"},{"name":"up-regulation of sorocarp spore cell differentiation","type":"exact"},{"name":"upregulation of sorocarp spore cell differentiation","type":"exact"}],"termid":"GO:1901263"}


id: MONDO:0012304
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"photosensitive epilepsy","termid":"MONDO:0015643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"photoparoxysmal response 2","secondary_identifiers":["GARD:15463","UMLS:C1835967","MEDGEN:324401","OMIM:609572"],"synonyms":[{"name":"PPR2","type":"exact"},{"name":"photoparoxysmal response 2","type":"exact"},{"name":"photoparoxysmal response with or without idiopathic generalised epilepsy","type":"related"},{"name":"photoparoxysmal response with or without idiopathic generalized epilepsy","type":"related"}],"termid":"MONDO:0012304","xrefs":{"Monarch":{"xref_id":"0012304"}}}


id: PBO:0071375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 34","termid":"PBO:0071375"}


id: PBO:0043342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride nucleotide-sensitive channel 1A pseudogene 1","termid":"PBO:0043342"}


id: PBO:0071060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 62","termid":"PBO:0071060"}


id: MONDO:0014589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any maturity-onset diabetes of the young in which the cause of the disease is a mutation in the KCNJ11 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity-onset diabetes of the young","termid":"MONDO:0018911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0019254","MONDO:0037792","MONDO:0005066","MONDO:0005015","MONDO:0004335"],"is_obsolete":false,"name":"maturity-onset diabetes of the young type 13","secondary_identifiers":["GARD:16090","MEDGEN:897640","OMIM:616329","DOID:0111110","UMLS:C4225365"],"synonyms":[{"name":"KCNJ11 maturity-onset diabetes of the young (disease)","type":"exact"},{"name":"MODY type 13","type":"exact"},{"name":"MODY, type 13","type":"related"},{"name":"MODY13","type":"exact"},{"name":"maturity-onset diabetes of the young (disease) caused by mutation in KCNJ11","type":"exact"},{"name":"maturity-onset diabetes of the young, type 13","type":"related"}],"termid":"MONDO:0014589","xrefs":{"Monarch":{"xref_id":"0014589"}}}


id: GO:1901973
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to proline.","definition_xrefs":["GOC:pm","GOC:TermGenie","PMID:7730362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid binding","termid":"GO:0016597"},{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"proline binding","termid":"GO:1901973"}


id: GO:0044089
data:
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