# terms

id: PBO:0017741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial thiosulfate sulfurtransferase Rdl2 (predicted)","termid":"PBO:0017741"}


id: PBO:0063101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARD6G antisense RNA 1","termid":"PBO:0063101"}


id: MONDO:0014894
data:
  {"annotated_genes":["SJAG_00327"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87921],"is_not":false,"summary":null,"term":"MONDO:0014894"}]},"cv_name":"mondo","definition":"Any Meier-Gorlin syndrome in which the cause of the disease is a mutation in the CDC45 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Meier-Gorlin syndrome","termid":"MONDO:0016817"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00327":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Meier-Gorlin syndrome 7","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4310738","DOID:0080518","GARD:16181","MEDGEN:934705","OMIM:617063"],"synonyms":[{"name":"CDC45 Meier-Gorlin syndrome","type":"exact"},{"name":"MGORS7","type":"exact"},{"name":"Meier-Gorlin syndrome 7","type":"exact"},{"name":"Meier-Gorlin syndrome 7; MGORS7","type":"exact"},{"name":"Meier-Gorlin syndrome caused by mutation in CDC45","type":"exact"},{"name":"Meier-Gorlin syndrome type 7","type":"exact"}],"termid":"MONDO:0014894","terms_by_termid":{"MONDO:0014894":null},"xrefs":{"Monarch":{"xref_id":"0014894"}}}


id: PBO:0077247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and death domain 1","termid":"PBO:0077247"}


id: PBO:0013805
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae HUT1","termid":"PBO:0013805"}


id: PATO:0002263
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a protein or a molecule by virtue of the bearer's lacking a phosphate (PO4) group.","direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylation","termid":"PATO:0002262"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dephosphorylated","termid":"PATO:0002263"}


id: PBO:0086517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; null mutant displays elevated sensitivity to expression of a mutant huntingtin fragment or of alpha-synuclein","termid":"PBO:0086517"}


id: GO:0005569
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete small nucleolar RNA (obsolete GO:0005569)","synonyms":[{"name":"small nucleolar RNA","type":"exact"}],"termid":"GO:0005569"}


id: MONDO:0002882
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm with neuroendocrine differentiation that arises from the colon. It includes well differentiated neuroendocrine tumors (low and intermediate grade) and poorly differentiated neuroendocrine carcinomas (high grade).","definition_xrefs":["NCIT:C5697"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal neuroendocrine neoplasm","termid":"MONDO:0002883"},{"relation_name":"is_a","term_name":"colonic neoplasm","termid":"MONDO:0005401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"colon neuroendocrine neoplasm","secondary_identifiers":["MEDGEN:234162","UMLS:C1333097","Orphanet:100080","DOID:4118","GARD:19755"],"synonyms":[{"name":"colon NET","type":"exact"},{"name":"colon neuroendocrine neoplasm","type":"exact"},{"name":"colon neuroendocrine tumor","type":"exact"},{"name":"colon neuroendocrine tumor, well differentiated, low or intermediate grade","type":"exact"},{"name":"colon neuroendocrine tumour","type":"exact"},{"name":"colonic neuroendocrine neoplasm","type":"exact"},{"name":"colonic neuroendocrine tumor","type":"exact"},{"name":"colonic neuroendocrine tumour","type":"exact"},{"name":"neuroendocrine neoplasm of colon","type":"exact"},{"name":"neuroendocrine neoplasm of the colon","type":"exact"},{"name":"neuroendocrine tumor of the colon","type":"related"},{"name":"neuroendocrine tumour of the colon","type":"related"}],"termid":"MONDO:0002882","xrefs":{"Monarch":{"xref_id":"0002882"}}}


id: PR:O13699
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug132 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 132 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11G7.06c","synonyms":[{"name":"Spom972h-mug132","type":"exact"}],"termid":"PR:O13699"}


id: PBO:0046233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 27","termid":"PBO:0046233"}


id: FYPO:0004962
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at replication origins is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:12419251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to chromatin at replication origin","synonyms":[{"name":"normal protein localisation to chromatin at replication origin","type":"exact"},{"name":"normal protein localization to chromatin at replication origin during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at replication origin during vegetative growth","type":"exact"}],"termid":"FYPO:0004962"}


id: PBO:0051724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitory synaptic factor 1","termid":"PBO:0051724"}


id: MONDO:1011630
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital lethal spasms, non-human animal","secondary_identifiers":["OMIA:000927"],"termid":"MONDO:1011630","xrefs":{"Monarch":{"xref_id":"1011630"}}}


id: PBO:0080396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS26 endosomal protein sorting factor C","termid":"PBO:0080396"}


id: GO:0047501
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-neomenthol + NADP+ = (2S,5R)-menthone + H+ + NADPH.","definition_xrefs":["RHEA:23812","EC:1.1.1.208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"(+)-neomenthol dehydrogenase activity","secondary_identifiers":["MetaCyc:+-NEOMENTHOL-DEHYDROGENASE-RXN","KEGG_REACTION:R02548"],"synonyms":[{"name":"(+)-neomenthol:NADP+ oxidoreductase activity","type":"related"},{"name":"monoterpenoid dehydrogenase activity","type":"broad"}],"termid":"GO:0047501"}


id: PATO:0000645
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A decreased size quality inhering in a bearer by virtue of the bearer's exhibiting reduced number of cells within an organ or tissue.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased size","termid":"PATO:0000587"},{"relation_name":"is_a","term_name":"aplastic/hypoplastic","termid":"PATO:0002290"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoplastic","secondary_identifiers":["PATO:0000942"],"synonyms":[{"name":"hypoplasia","type":"exact"},{"name":"underdeveloped","type":"related"}],"termid":"PATO:0000645"}


id: FYPO:0007860
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the spindle pole body (SPB) duplicates normally, and the SPBs separate, in a cell that does not form a mitotic spindle or undergo cytokinesis. The DNA and nucleus may go on to divide in the absence of a spindle, with each DNA mass associated with an SPB.","definition_xrefs":["PomBase:jh","PMID:20967237","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"},{"relation_name":"part_of","term_name":"nuclear division in absence of mitotic spindle","termid":"FYPO:0007859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0000002","FYPO:0000337","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"spindle pole body separation in absence of mitotic spindle","synonyms":[{"name":"SPB separation in absence of mitotic spindle","type":"exact"},{"name":"spindle pole body separation in absence of mitotic spindle during mitotic cell cycle","type":"related"},{"name":"spindle pole body separation in absence of mitotic spindle during vegetative growth","type":"exact"}],"termid":"FYPO:0007860"}


id: GO:2000084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesenchymal to epithelial transition involved in mesonephros morphogenesis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000696"},{"relation_name":"regulates","term_name":"mesenchymal to epithelial transition involved in mesonephros morphogenesis","termid":"GO:0061261"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal to epithelial transition involved in mesonephros morphogenesis","synonyms":[{"name":"regulation of mesonephric mesenchyme to epithelial transition","type":"related"}],"termid":"GO:2000084"}


id: MONDO:0056797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with midbrain and hindbrain malformations","secondary_identifiers":["MEDGEN:1385580","OMIM:617523","DOID:0080312","UMLS:C4479613"],"synonyms":[{"name":"NEDMHM","type":"exact"},{"name":"neurodevelopmental disorder with midbrain and hindbrain malformations","type":"exact"}],"termid":"MONDO:0056797","xrefs":{"Monarch":{"xref_id":"0056797"}}}


id: PBO:0061510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSA2 ribosome biogenesis factor","termid":"PBO:0061510"}


id: FYPO:0000288
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype that affects the regulation of gene expression.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression phenotype","termid":"FYPO:0000142"},{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"gene expression regulation phenotype","synonyms":[{"name":"fission yeast gene expression regulation phenotype","type":"exact"}],"termid":"FYPO:0000288"}


id: PBO:0084104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GYF domain protein; involved in COPII vesicle formation; interacts with the Sec23p/Sec24p subcomplex; overexpression suppresses the temperature sensitivity of a myo2 mutant; similar to S. pombe Mpd2; SMY2 has a paralog, SYH1, that arose from the whole genome duplication","termid":"PBO:0084104"}


id: PBO:0113130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Evolutionarily-conserved 5'-3' exonuclease; deNADding enzyme that modulates mitochondrial NAD-capped RNA; component of cytoplasmic P-bodies involved in mRNA decay; positively regulates transcription initiation and elongation; involved in microtubule-mediated processes, filamentous growth, ribosomal RNA maturation, telomere maintenance, and tRNA intron turnover; negative regulator of autophagy; activated by scavenger decapping enzyme Dcs1p; role in preventing L-A mycovirus pathogenesis","termid":"PBO:0113130"}


id: PATO:0001873
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A convex 3-D shape quality inhering in a bearer by virtue of the bearer's exhibiting a consistently-sized round cross section.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"has_cross_section","term_name":"circular","termid":"PATO:0000411"},{"relation_name":"is_a","term_name":"convex 3-D shape","termid":"PATO:0002007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cylindrical","secondary_identifiers":["PATO:0001203"],"synonyms":[{"name":"rod-like","type":"exact"},{"name":"rod-shaped","type":"exact"},{"name":"tubulate","type":"exact"}],"termid":"PATO:0001873"}


id: PBO:0065637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 12","termid":"PBO:0065637"}


id: PBO:0087416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit 6 of the ubiquinol cytochrome-c reductase complex; the complex, also known as the cytochrome bc(1) complex or Complex III, is a component of the mitochondrial inner membrane electron transport chain; highly acidic protein; required for maturation of cytochrome c1; may be loosely associated with the complex since it is easily released into the intermembrane space","termid":"PBO:0087416"}


id: SO:1000092
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Any sequence variant effect that is known at nucleotide level but cannot be explained by using other key terms.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000092 sequence_variant_causing_complex_change_of_translational_product (obsolete SO:1000092)","synonyms":[{"name":"mutation causing complex change of translational product","type":"related"},{"name":"sequence variant causing complex change of translational product","type":"exact"}],"termid":"SO:1000092"}


id: SO:0001920
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An adenine methylated at the 6 nitrogen.","definition_xrefs":["SO:rtapella"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated_adenine","termid":"SO:0000161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_methyladenine","secondary_identifiers":["http:http\\://www.pacificbiosciences.com/pdf/WP_Detecting_DNA_Base_Modifications_Using_SMRT_Sequencing.pdf"],"synonyms":[{"name":"6-mA","type":"exact"},{"name":"6-methyladenine","type":"exact"},{"name":"6mA","type":"exact"},{"name":"N6-methyladenine","type":"exact"},{"name":"m-6A","type":"exact"},{"name":"m6a","type":"exact"}],"termid":"SO:0001920"}


id: MOD:00119
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-serine residue by a thioether bond to form L-lanthionine.","definition_xrefs":["ChEBI:21347","DeltaMass:7","RESID:AA0110#CSX"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"L-lanthionine","termid":"MOD:01839"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-lanthionine (Cys-Ser)","synonyms":[{"name":"(2R,2'R)-3,3'-sulfanediylbis(2-aminopropanoic acid)","type":"exact"},{"name":"(R)-S-(2-amino-2-carboxyethyl)-L-cysteine","type":"exact"},{"name":"(R,R)-2,6-diamino-4-thiaheptanedioic acid","type":"exact"},{"name":"(R,R)-3,3'-thiobis-(2-aminopropanoic acid)","type":"exact"},{"name":"(R,R)-bis(2-amino-2-carboxyethyl)sulfide","type":"exact"},{"name":"2-amino-3-(2-amino-2-carboxyethyl)sulfanylpropanoic acid","type":"exact"},{"name":"3,3'-thiobis-L-alanine","type":"exact"},{"name":"L-lanthionine","type":"exact"},{"name":"XLNK-SCys-(L)3Dha","type":"exact"}],"termid":"MOD:00119"}


id: FYPO:0007042
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alkaline phosphatase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phosphatase activity","termid":"FYPO:0004304"},{"relation_name":"is_a","term_name":"abnormal alkaline phosphatase activity","termid":"FYPO:0007040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased alkaline phosphatase activity","synonyms":[{"name":"reduced alkaline phosphatase activity","type":"exact"}],"termid":"FYPO:0007042"}


id: PBO:0113186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipid scramblase that mediates autophagosomal membrane expansion; translocates phospholipids between outer and inner leaflets of liposomes; transmembrane protein involved in forming Cvt and autophagic vesicles; cycles between phagophore assembly site (PAS) and other cytosolic punctate structures","termid":"PBO:0113186"}


id: FYPO:0001776
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the eisosome filament is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell cortex during vegetative growth","termid":"FYPO:0001402"},{"relation_name":"is_a","term_name":"normal protein localization to cytoskeleton during vegetative growth","termid":"FYPO:0003184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to eisosome filament","synonyms":[{"name":"normal protein localisation to eisosome filament","type":"exact"},{"name":"normal protein localization to eisosome filament during mitotic cell cycle","type":"related"},{"name":"normal protein localization to eisosome filament during vegetative growth","type":"exact"},{"name":"normal protein localization to linear eisosome","type":"exact"}],"termid":"FYPO:0001776"}


id: PBO:0002249
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.40","termid":"PBO:0002249"}


id: PBO:0085978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; proposed role in Golgi vesicle trafficking based on phenotypic profile, presence of a coiled-coil domain often associated with vesicle tethering proteins, and interaction profile process enrichment; may interact with ribosomes, based on co-purification studies; localizes to the ER and cell periphery in HTP studies; contains fibronectin type III domain fold","termid":"PBO:0085978"}


id: PBO:0086305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with DNA-dependent ATPase and ssDNA annealing activities; involved in maintenance of genome; interacts functionally with DNA polymerase delta; homolog of human Werner helicase interacting protein (WHIP); forms nuclear foci upon DNA replication stress","termid":"PBO:0086305"}


id: FYPO:0007229
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which 3'-deoxyribose phosphate lyase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal 3'-deoxyribose phosphate lyase activity","termid":"FYPO:0007228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abolished 3'-deoxyribose phosphate lyase activity","synonyms":[{"name":"3'-deoxyribose phosphate lyase activity abolished","type":"exact"},{"name":"abolished 3'-dRP lyase activity","type":"exact"}],"termid":"FYPO:0007229"}


id: PBO:0089004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino]imidazole-4-carboxamide isomerase His6","termid":"PBO:0089004"}


id: GO:0003152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which an epithelial sheet bends along a linear axis, contributing to embryonic heart tube formation.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"morphogenesis of an epithelial fold","termid":"GO:0060571"},{"relation_name":"part_of","term_name":"embryonic heart tube formation via epithelial folding","termid":"GO:0003145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"morphogenesis of an epithelial fold involved in embryonic heart tube formation","termid":"GO:0003152"}


id: GO:1904154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of retrograde protein transport, ER to cytosol.","definition_xrefs":["PMID:18555783","GOC:bf","GO_REF:0000058","GOC:TermGenie","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein exit from endoplasmic reticulum","termid":"GO:0070863"},{"relation_name":"is_a","term_name":"regulation of retrograde protein transport, ER to cytosol","termid":"GO:1904152"},{"relation_name":"positively_regulates","term_name":"retrograde protein transport, ER to cytosol","termid":"GO:0030970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of retrograde protein transport, ER to cytosol","synonyms":[{"name":"activation of protein dislocation from ER","type":"narrow"},{"name":"activation of retrograde protein transport, ER to cytosol","type":"narrow"},{"name":"activation of retrograde protein transport, endoplasmic reticulum to cytosol","type":"narrow"},{"name":"positive regulation of protein dislocation from ER","type":"exact"},{"name":"positive regulation of protein retrotranslocation from ER","type":"exact"},{"name":"positive regulation of retrograde protein transport, endoplasmic reticulum to cytosol","type":"exact"},{"name":"up regulation of protein dislocation from ER","type":"exact"},{"name":"up regulation of retrograde protein transport, ER to cytosol","type":"exact"},{"name":"up regulation of retrograde protein transport, endoplasmic reticulum to cytosol","type":"exact"},{"name":"up-regulation of protein dislocation from ER","type":"exact"},{"name":"up-regulation of protein retrotranslocation from ER","type":"exact"},{"name":"up-regulation of retrograde protein transport, ER to cytosol","type":"exact"},{"name":"up-regulation of retrograde protein transport, endoplasmic reticulum to cytosol","type":"exact"},{"name":"upregulation of protein dislocation from ER","type":"exact"},{"name":"upregulation of retrograde protein transport, ER to cytosol","type":"exact"},{"name":"upregulation of retrograde protein transport, endoplasmic reticulum to cytosol","type":"exact"}],"termid":"GO:1904154"}


id: PBO:0087490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of cytochrome C oxidase complex; stabilizes or regulates formation of respiratory chain supercomplexes composed of Complex III (ubiquinol-cytochrome c reductase) and Complex IV (cytochrome c oxidase)","termid":"PBO:0087490"}


id: GO:0018609
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,3-unsubstituted benzenoid + O2 + NAD(P)H + H+ = 2,3-cis-dihydroxydihydrobenzenoid + NAD(P)+. Substrates include 1,4-dichlorobenzene (forms 3,6-dichloro-cis-1,2-dihydroxycyclohexa-3,5-diene), 1,2,3,4-tetrachlorobenzene (forms cis-chlorobenzene dihydrodiol) and 1,2,4-trichlorobenzene (forms 3,4,6-trichloro-cis-1,2-dihydroxycyclohexa-3,5-diene).","definition_xrefs":["UM-BBD_enzymeID:e0062"],"gene_count":0,"genotype_count":0,"name":"obsolete chlorobenzene dioxygenase activity (obsolete GO:0018609)","termid":"GO:0018609"}


id: PBO:0086817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YLR415C is not an essential gene","termid":"PBO:0086817"}


id: PBO:0077564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 270","termid":"PBO:0077564"}


id: PBO:0082055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-5' exoribonuclease; required for maturation of 3' ends of 5S rRNA and tRNA-Arg3 from dicistronic transcripts","termid":"PBO:0082055"}


id: PBO:0053313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA, regulator of reprogramming","termid":"PBO:0053313"}


id: PBO:0042573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDKN2A interacting protein N-terminal like pseudogene 2","termid":"PBO:0042573"}


id: MONDO:0003186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infrequent esophageal carcinoma arising from esophageal glands. (WHO)","definition_xrefs":["NCIT:C5342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoid cystic carcinoma","termid":"MONDO:0004971"},{"relation_name":"is_a","term_name":"esophageal adenocarcinoma","termid":"MONDO:0005028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"esophageal adenoid cystic carcinoma","secondary_identifiers":["UMLS:C1333441","DOID:4878","MEDGEN:232468"],"synonyms":[{"name":"adenoid cystic carcinoma of esophagus","type":"exact"},{"name":"adenoid cystic carcinoma of oesophagus","type":"exact"},{"name":"adenoid cystic carcinoma of the esophagus","type":"exact"},{"name":"adenoid cystic carcinoma of the oesophagus","type":"exact"},{"name":"adenoid cystic carcinoma, esophagus","type":"exact"},{"name":"adenoid cystic carcinoma, oesophagus","type":"exact"},{"name":"adenoid cystic esophagus carcinoma","type":"exact"},{"name":"adenoid cystic oesophagus carcinoma","type":"exact"},{"name":"esophageal adenoid cystic cancer","type":"exact"},{"name":"esophageal adenoid cystic carcinoma","type":"exact"},{"name":"esophagus adenoid cystic carcinoma","type":"exact"},{"name":"oesophagus adenoid cystic carcinoma","type":"exact"}],"termid":"MONDO:0003186","xrefs":{"Monarch":{"xref_id":"0003186"}}}


id: PBO:0029160
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_sensitivity_to_chemical","termid":"PBO:0029160"}


id: FYPO:0000877
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in centromeric regions occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 dimethylation at centromere during vegetative growth","termid":"FYPO:0000867"},{"relation_name":"is_a","term_name":"decreased histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0005447","FYPO:0000002","FYPO:0002494","FYPO:0001320"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation at centromere during vegetative growth","synonyms":[{"name":"decreased centromeric histone H3-K9 dimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3 K9 dimethylation at centromere during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at centromere during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9 dimethylation at centromere during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me2 at centromere during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 dimethylation at centromere during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 dimethylation at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0000877"}


id: PBO:0053284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain and actin binding 1","termid":"PBO:0053284"}


id: MOD:00165
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to 1'-mannosyl-L-tryptophan.","definition_xrefs":["PubMed:1482345","RESID:AA0156","PubMed:16150691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-glycosylated residue","termid":"MOD:00006"},{"relation_name":"is_a","term_name":"mannosylated residue","termid":"MOD:00595"},{"relation_name":"is_a","term_name":"monohexosylated (Hex1)","termid":"MOD:00761"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"1'-mannosyl-L-tryptophan","synonyms":[{"name":"(2S)-2-amino-3-(1-D-mannopyranosyloxy-1H-indol-3-yl)propanoic acid","type":"exact"},{"name":"1'-glycosyl-L-tryptophan","type":"exact"},{"name":"1'-mannosyl-L-tryptophan","type":"exact"},{"name":"CARBOHYD N-linked (Man) tryptophan","type":"exact"},{"name":"N-mannosyl-tryptophan","type":"exact"},{"name":"N1'ManTrp","type":"exact"},{"name":"N1-mannosyl-tryptophan","type":"exact"}],"termid":"MOD:00165"}


id: PBO:0082502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of DNA polymerase (II) epsilon; a chromosomal DNA replication polymerase that exhibits processivity and proofreading exonuclease activity; participates in leading-strand synthesis during DNA replication; also involved in DNA synthesis during DNA repair; interacts extensively with Mrc1p","termid":"PBO:0082502"}


id: GO:0000203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Upregulation of MAPKKK activity in the context of sporulation. As in, but not restricted to, the taxon Saccharomyces (Saccharomyces, ncbi_taxonomy_id:4930).","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKKK during sporulation (sensu Saccharomyces) (obsolete GO:0000203)","synonyms":[{"name":"activation of MAPKKK during sporulation (sensu Saccharomyces)","type":"exact"}],"termid":"GO:0000203"}


id: PBO:0058999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metabolism of cobalamin associated A","termid":"PBO:0058999"}


id: PBO:0011441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic eisosome BAR domain protein Pil2","termid":"PBO:0011441"}


id: PBO:0003425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VRR-NUC nuclease associated domain, human MTMR15 homolog","termid":"PBO:0003425"}


id: PBO:0001974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent 5' to 3' DNA/RNA helicase Sen1","termid":"PBO:0001974"}


id: GO:1901413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tetrapyrrole biosynthetic process from glycine and succinyl-CoA.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid metabolic process","termid":"GO:0006521"},{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound metabolic process","termid":"GO:0019219"},{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of tetrapyrrole biosynthetic process","termid":"GO:1901463"},{"relation_name":"regulates","term_name":"tetrapyrrole biosynthetic process from glycine and succinyl-CoA","termid":"GO:0033527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0055086","GO:0006520","GO:0006790","GO:0033013","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA","synonyms":[{"name":"regulation of tetrapyrrole anabolism from glycine and succinyl-CoA","type":"exact"},{"name":"regulation of tetrapyrrole biosynthesis from glycine and succinyl-CoA","type":"exact"},{"name":"regulation of tetrapyrrole formation from glycine and succinyl-CoA","type":"exact"},{"name":"regulation of tetrapyrrole synthesis from glycine and succinyl-CoA","type":"exact"}],"termid":"GO:1901413"}


id: GO:0016282
data:
  {"annotated_genes":["SJAG_04744","SJAG_00662","SJAG_02995","SJAG_04981","SJAG_01117","SJAG_04891","SJAG_02628","SJAG_03472","SJAG_02164","SJAG_02263","SJAG_04900","SJAG_03147","SJAG_02376"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[59475,60163,63230,64295,64705,64943,70263,71317,73967,76231,97900,98661,100741],"is_not":false,"summary":null,"term":"GO:0016282"}]},"cv_name":"cellular_component","definition":"A protein complex composed of the 40S ribosomal subunit plus eIF1, eIF1A, eIF3, eIF5, and eIF2-GTP-bound methionyl-initiator methionine tRNA.","definition_xrefs":["PMID:29735639","PMID:16510876","GOC:hjd","PMID:15145049","PMID:25742741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic translation preinitiation complex","termid":"GO:0070993"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00662":null,"SJAG_01117":null,"SJAG_02164":null,"SJAG_02263":null,"SJAG_02376":null,"SJAG_02628":null,"SJAG_02995":null,"SJAG_03147":null,"SJAG_03472":null,"SJAG_04744":null,"SJAG_04891":null,"SJAG_04900":null,"SJAG_04981":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"eukaryotic 43S preinitiation complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"eukaryotic 43S pre-initiation complex","type":"exact"}],"termid":"GO:0016282","terms_by_termid":{"GO:0016282":null}}


id: PBO:0030240
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K14_acetylation","termid":"PBO:0030240"}


id: PBO:0017859
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolysis rate of soluble starch to glucose is 8.9 (uM min-1 ml-2)","termid":"PBO:0017859"}


id: PBO:0050135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 45","termid":"PBO:0050135"}


id: PBO:0069747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1028, pseudogene","termid":"PBO:0069747"}


id: GO:1900226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of NLRP3 inflammasome complex assembly.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of NLRP3 inflammasome complex assembly","termid":"GO:1900225"},{"relation_name":"negatively_regulates","term_name":"NLRP3 inflammasome complex assembly","termid":"GO:0044546"},{"relation_name":"part_of","term_name":"negative regulation of inflammasome-mediated signaling pathway","termid":"GO:0141086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"negative regulation of NLRP3 inflammasome complex assembly","synonyms":[{"name":"down regulation of NALP3 inflammasome complex assembly","type":"exact"},{"name":"down regulation of NLRP3 inflammasome activation","type":"related"},{"name":"down regulation of NLRP3 inflammasome complex assembly","type":"exact"},{"name":"down-regulation of NALP3 inflammasome complex assembly","type":"exact"},{"name":"down-regulation of NLRP3 inflammasome activation","type":"related"},{"name":"down-regulation of NLRP3 inflammasome complex assembly","type":"exact"},{"name":"downregulation of NALP3 inflammasome complex assembly","type":"exact"},{"name":"downregulation of NLRP3 inflammasome activation","type":"related"},{"name":"downregulation of NLRP3 inflammasome complex assembly","type":"exact"},{"name":"inhibition of NALP3 inflammasome complex assembly","type":"exact"},{"name":"inhibition of NLRP3 inflammasome activation","type":"related"},{"name":"inhibition of NLRP3 inflammasome complex assembly","type":"narrow"},{"name":"negative regulation of NALP3 inflammasome complex assembly","type":"exact"},{"name":"negative regulation of NLRP3 inflammasome activation","type":"related"}],"termid":"GO:1900226"}


id: PBO:0049142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione peroxidase 1","termid":"PBO:0049142"}


id: GO:0106153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a histone in which a residue has been modified by phosphorylation.","definition_xrefs":["GOC:mah","PMID:20679485"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphorylated histone binding (obsolete GO:0106153)","termid":"GO:0106153"}


id: PBO:0069311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 567, pseudogene","termid":"PBO:0069311"}


id: PBO:0043765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly homolog COX15","termid":"PBO:0043765"}


id: MONDO:0019037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare late-onset neurodegenerative disease characterized by supranuclear gaze palsy, postural instability, progressive rigidity, and mild dementia.","definition_xrefs":["Orphanet:683"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary dementia","termid":"MONDO:0015547"},{"relation_name":"excluded_subClassOf","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"supranuclear oculomotor palsy","termid":"MONDO:0020257"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"progressive supranuclear palsy","secondary_identifiers":["DOID:678","MEDGEN:21026","MESH:D013494","OMIMPS:601104","icd11.foundation:1493396558","SCTID:28978003","UMLS:C0038868","ICD10CM:G23.1","NANDO:1200009","SCTID:192976002","GARD:7471","NCIT:C85028","ICD9:333.0","NORD:1619","MedDRA:10036813"],"synonyms":[{"name":"PSP syndrome","type":"exact"},{"name":"Steele-Richardson-Olszewski disease","type":"exact"},{"name":"Steele-Richardson-Olszewski syndrome","type":"exact"},{"name":"familial progressive supranuclear palsy (type)","type":"related"},{"name":"progressive supranuclear ophthalmoplegia","type":"exact"},{"name":"supranuclear palsy, progressive","type":"related"}],"termid":"MONDO:0019037","xrefs":{"Monarch":{"xref_id":"0019037"}}}


id: PBO:0028800
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_chromatin_binding_at_mating-type_region_replication_fork_barrier","termid":"PBO:0028800"}


id: PBO:0001360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S23 (predicted)","termid":"PBO:0001360"}


id: GO:0044035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A catabolic process - chemical reactions and pathways resulting in the breakdown of substances - which involves more than one organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism catabolic process (obsolete GO:0044035)","synonyms":[{"name":"multi-organism catabolism","type":"exact"},{"name":"multi-organismal catabolic process","type":"exact"},{"name":"multi-organismal catabolism","type":"exact"}],"termid":"GO:0044035"}


id: FYPO:0000227
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A chromosome segregation phenotype observed in the vegetative growth phase of the life cycle in which one or more chromosome or minichromosome is not correctly segregated to either daughter cells during mitosis.","definition_xrefs":["PMID:20211136","PomBase:mah","PMID:11809834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000641","FYPO:0001320","FYPO:0000337","FYPO:0001985","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"chromosome loss during mitotic chromosome segregation","synonyms":[{"name":"chromosome loss during mitotic sister chromatid segregation","type":"exact"},{"name":"chromosome loss during segregation during vegetative growth","type":"exact"},{"name":"chromosome segregation defects, chromosome loss","type":"exact"}],"termid":"FYPO:0000227"}


id: GO:0007354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of the anterior/posterior axis of the embryo by products of genes expressed in the zygote; exemplified in insects by the gap genes, pair rule genes and segment polarity gene cascade.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior axis specification, embryo","termid":"GO:0008595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"zygotic determination of anterior/posterior axis, embryo","termid":"GO:0007354"}


id: MONDO:0003879
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm of the ovary characterized by the presence of malignant glandular cells resembling endometrial cells in a fibrotic stroma.","definition_xrefs":["NCIT:C40060","NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"ovarian carcinosarcoma","termid":"MONDO:0003792"},{"relation_name":"is_a","term_name":"adenocarcinofibroma","termid":"MONDO:0002991"},{"relation_name":"is_a","term_name":"ovarian cancer","termid":"MONDO:0008170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian endometrioid adenocarcinofibroma","secondary_identifiers":["MEDGEN:276664","DOID:6445","ICDO:8381/3","UMLS:C1518711"],"synonyms":[{"name":"ovarian endometrioid adenocarcinofibroma","type":"exact"},{"name":"ovarian endometrioid malignant adenofibroma","type":"exact"}],"termid":"MONDO:0003879","xrefs":{"Monarch":{"xref_id":"0003879"}}}


id: PBO:0082640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of glycosylphosphatidylinositol-mannosyltransferase I; essential component; required for the autocatalytic post-translational processing of the protease B precursor Prb1p; localizes to ER in lumenal orientation; homolog of mammalian PIG-X","termid":"PBO:0082640"}


id: MONDO:0011104
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cataract (disease) in which the cause of the disease is a mutation in the CRYBB2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"},{"relation_name":"excluded_subClassOf","term_name":"cataract - microcornea syndrome","termid":"MONDO:0015300"},{"relation_name":"is_a","term_name":"cataract","termid":"MONDO:0005129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 3 multiple types","secondary_identifiers":["GARD:15335","OMIM:601547","DOID:0110269","MESH:C563294","MEDGEN:321901","UMLS:C1832175"],"synonyms":[{"name":"CCA2","type":"narrow"},{"name":"CRYBB2 cataract (disease)","type":"exact"},{"name":"CTRCT3","type":"exact"},{"name":"cataract (disease) caused by mutation in CRYBB2","type":"exact"},{"name":"cataract 3 multiple types with or without microcornea","type":"exact"},{"name":"cataract 3, multiple types","type":"related"},{"name":"cataract 3, multiple types, with or without microcornea","type":"related"},{"name":"cataract, congenital, cerulean type, 2","type":"related"},{"name":"congenital cerulean type cataract 2","type":"narrow"}],"termid":"MONDO:0011104","xrefs":{"Monarch":{"xref_id":"0011104"}}}


id: PBO:0089392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synembryn family GEF, Ric8","termid":"PBO:0089392"}


id: GO:0007304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The construction of a chorion-containing eggshell. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eggshell formation","termid":"GO:0030703"},{"relation_name":"part_of","term_name":"follicle cell of egg chamber development","termid":"GO:0030707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chorion-containing eggshell formation","synonyms":[{"name":"eggshell formation","type":"broad"}],"termid":"GO:0007304"}


id: PBO:0017556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"substrate-specific APC activator Slp1","termid":"PBO:0017556"}


id: PBO:0079627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 O","termid":"PBO:0079627"}


id: PBO:0079264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 36","termid":"PBO:0079264"}


id: FYPO:0001138
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of the mature 5.8S rRNA measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mature rRNA level","termid":"FYPO:0006470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased mature 5.8S rRNA level","synonyms":[{"name":"decreased 5.8S rRNA level","type":"broad"},{"name":"decreased 5.8S rRNA level during vegetative growth","type":"exact"},{"name":"decreased mature 5.8S rRNA accumulation","type":"related"},{"name":"decreased mature 5.8S rRNA level during mitotic cell cycle","type":"related"},{"name":"decreased mature 5.8S rRNA level during vegetative growth","type":"exact"},{"name":"decreased mature 5.8S rRNA transcript level","type":"exact"},{"name":"reduced mature 5.8S rRNA level","type":"exact"}],"termid":"FYPO:0001138"}


id: MONDO:0004121
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete prostate small cell carcinoma (obsolete MONDO:0004121)","termid":"MONDO:0004121","xrefs":{"Monarch":{"xref_id":"0004121"}}}


id: GO:1903197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-dopa biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:16731528","GOC:bf","GO_REF:0000058","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of L-dopa biosynthetic process","termid":"GO:1903195"},{"relation_name":"is_a","term_name":"positive regulation of amino acid biosynthetic process","termid":"GO:2000284"},{"relation_name":"positively_regulates","term_name":"L-dopa biosynthetic process","termid":"GO:1903185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of L-dopa biosynthetic process","synonyms":[{"name":"activation of L-dopa anabolism","type":"narrow"},{"name":"activation of L-dopa biosynthesis","type":"narrow"},{"name":"activation of L-dopa biosynthetic process","type":"narrow"},{"name":"activation of L-dopa formation","type":"narrow"},{"name":"activation of L-dopa synthesis","type":"narrow"},{"name":"positive regulation of L-dopa anabolism","type":"exact"},{"name":"positive regulation of L-dopa biosynthesis","type":"exact"},{"name":"positive regulation of L-dopa formation","type":"exact"},{"name":"positive regulation of L-dopa synthesis","type":"exact"},{"name":"up regulation of L-dopa anabolism","type":"exact"},{"name":"up regulation of L-dopa biosynthesis","type":"exact"},{"name":"up regulation of L-dopa biosynthetic process","type":"exact"},{"name":"up regulation of L-dopa formation","type":"exact"},{"name":"up regulation of L-dopa synthesis","type":"exact"},{"name":"up-regulation of L-dopa anabolism","type":"exact"},{"name":"up-regulation of L-dopa biosynthesis","type":"exact"},{"name":"up-regulation of L-dopa biosynthetic process","type":"exact"},{"name":"up-regulation of L-dopa formation","type":"exact"},{"name":"up-regulation of L-dopa synthesis","type":"exact"},{"name":"upregulation of L-dopa anabolism","type":"exact"},{"name":"upregulation of L-dopa biosynthesis","type":"exact"},{"name":"upregulation of L-dopa biosynthetic process","type":"exact"},{"name":"upregulation of L-dopa formation","type":"exact"},{"name":"upregulation of L-dopa synthesis","type":"exact"}],"termid":"GO:1903197"}


id: GO:0098651
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any collagen timer that is part of a basement membrane.","definition_xrefs":["GOC:dos","PMID:21421911"],"gene_count":0,"genotype_count":0,"name":"obsolete basement membrane collagen trimer (obsolete GO:0098651)","termid":"GO:0098651"}


id: PBO:0116474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg24b","termid":"PBO:0116474"}


id: MONDO:0018491
data:
  {"annotated_genes":["SJAG_02791","SJAG_02313"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009736"},{"annotations":[88680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014466"},{"annotations":[88722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011152"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurometabolic disorder due to serine deficiency","termid":"MONDO:0018162"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02313":null,"SJAG_02791":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"3-phosphoglycerate dehydrogenase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0580190","ICD9:270.7","icd11.foundation:460538363","MEDGEN:663158","SCTID:303098002","Orphanet:422519"],"termid":"MONDO:0018491","terms_by_termid":{"MONDO:0009736":null,"MONDO:0011152":null,"MONDO:0014466":null},"xrefs":{"Monarch":{"xref_id":"0018491"}}}


id: GO:0072149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a glomerular visceral epithelial cell. A glomerular visceral epithelial cell is a specialized epithelial cell that contains 'feet' that interdigitate with the 'feet' of other glomerular epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell fate commitment","termid":"GO:0072148"},{"relation_name":"is_a","term_name":"glomerular epithelial cell fate commitment","termid":"GO:0072314"},{"relation_name":"part_of","term_name":"podocyte differentiation","termid":"GO:0072112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"podocyte cell fate commitment","synonyms":[{"name":"glomerular visceral epithelial cell fate commitment","type":"exact"}],"termid":"GO:0072149"}


id: GO:0019722
data:
  {"annotated_genes":["SJAG_00296","SJAG_04668","SJAG_03802","SJAG_02429","SJAG_01181","SJAG_02858","SJAG_04471","SJAG_03631","SJAG_04551","SJAG_04871","SJAG_03793","SJAG_03799","SJAG_03501","SJAG_03879","SJAG_03486"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66621,93029,99474,119246],"is_not":false,"summary":null,"term":"GO:0019722"},{"annotations":[94211,81306,74796,99918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097720"},{"annotations":[118339,120095,118000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061762"},{"annotations":[117987,102815],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0106057"},{"annotations":[112830,103963],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0050850"}]},"cv_name":"biological_process","definition":"Any intracellular signal transduction in which the signal is passed on within the cell via calcium ions.","definition_xrefs":["GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signaling cassette","termid":"GO:0141124"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_01181":null,"SJAG_02429":null,"SJAG_02858":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03631":null,"SJAG_03793":null,"SJAG_03799":null,"SJAG_03802":null,"SJAG_03879":null,"SJAG_04471":null,"SJAG_04551":null,"SJAG_04668":null,"SJAG_04871":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"calcium-mediated signaling","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Calcium_signaling"],"synonyms":[{"name":"calcium ion signaling","type":"exact"},{"name":"calcium signaling","type":"exact"},{"name":"calcium signalling","type":"exact"},{"name":"calcium-mediated signalling","type":"exact"}],"termid":"GO:0019722","terms_by_termid":{"GO:0019722":null,"GO:0050850":null,"GO:0061762":null,"GO:0097720":null,"GO:0106057":null}}


id: PBO:0108936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 15","termid":"PBO:0108936"}


id: MONDO:0700222
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disease that occurs as a consequence of immunosuppression in a recipient of a hematopoietic stem cell transplant, or as a consequence of the transplantation.","direct_ancestors":[{"relation_name":"is_a","term_name":"disease related to transplantation","termid":"MONDO:0700220"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disease related to hematopoietic stem cell transplant","termid":"MONDO:0700222","xrefs":{"Monarch":{"xref_id":"0700222"}}}


id: GO:0045272
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A subcomplex of the respiratory chain located in the plasma membrane. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone. Examples of this component are found in bacterial species.","definition_xrefs":["ISBN:0198547684","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane respiratory chain complex I (obsolete GO:0045272)","synonyms":[{"name":"NADH dehydrogenase (ubiquinone) complex","type":"broad"},{"name":"respiratory chain complex I","type":"broad"}],"termid":"GO:0045272"}


id: FYPO:0004400
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing the protein kinase inhibitor KT5823.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0002057","FYPO:0000257","FYPO:0002060","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on KT5823","synonyms":[{"name":"normal cell population growth in presence of KT5823","type":"exact"},{"name":"normal cell population growth on KT5823","type":"exact"},{"name":"normal cellular response to KT5823","type":"related"},{"name":"normal vegetative cell population growth on KT5823","type":"exact"}],"termid":"FYPO:0004400"}


id: GO:0021948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a deep nuclear neuron from the rostrodorsal region of the cerebellar plate to their final more ventral position.","definition_xrefs":["GOC:dph","GOC:jid","PMID:15157725","GO_REF:0000021","GOC:dgh","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron migration","termid":"GO:0001764"},{"relation_name":"is_a","term_name":"cell migration in hindbrain","termid":"GO:0021535"},{"relation_name":"part_of","term_name":"deep nuclear neuron cell migration","termid":"GO:0021946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inward migration of deep nuclear neurons","termid":"GO:0021948"}


id: MONDO:0000626
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the vestibular gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar benign neoplasm","termid":"MONDO:0000643"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vestibular gland benign neoplasm","secondary_identifiers":["DOID:0060088"],"synonyms":[{"name":"vestibular gland benign neoplasm","type":"exact"}],"termid":"MONDO:0000626","xrefs":{"Monarch":{"xref_id":"0000626"}}}


id: GO:0045206
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of MAPK phosphatase into, out of or within a cell, or between cells.","definition_xrefs":["GOC:ebc","GOC:mtg_transport","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPK phosphatase transporter activity (obsolete GO:0045206)","synonyms":[{"name":"MAPK phosphatase transporter activity","type":"exact"},{"name":"MKP shuttle","type":"narrow"},{"name":"leptomycin B-sensitive MAPK phosphatase transporter activity","type":"narrow"},{"name":"leptomycin B-sensitive MKP shuttle","type":"narrow"}],"termid":"GO:0045206"}


id: PR:Q10445
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rhp41 gene.","definition_xrefs":["UniProtKB:Q10445","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rhp41 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.12c","synonyms":[{"name":"Spom972h-rhp41","type":"exact"}],"termid":"PR:Q10445"}


id: GO:0031774
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a leukotriene receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"leukotriene receptor binding","synonyms":[{"name":"leukotriene receptor ligand","type":"narrow"}],"termid":"GO:0031774"}


id: PBO:0039283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG1 like 12, pseudogene","termid":"PBO:0039283"}


id: PBO:0067144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 192, pseudogene","termid":"PBO:0067144"}


id: PBO:0025536
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinic aciduria","termid":"PBO:0025536"}


id: FYPO:0006955
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-glutamine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular glutamine level","synonyms":[{"name":"increased cellular L-glutamine level","type":"exact"},{"name":"increased cellular glutamine level during mitotic cell cycle","type":"related"},{"name":"increased cellular glutamine level during vegetative growth","type":"exact"},{"name":"increased glutamine accumulation","type":"related"}],"termid":"FYPO:0006955"}


id: PBO:0066854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 154","termid":"PBO:0066854"}


id: GO:0000813
data:
  {"annotated_genes":["SJAG_01981","SJAG_04349"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73902,89933],"is_not":false,"summary":null,"term":"GO:0000813"}]},"cv_name":"cellular_component","definition":"An endosomal sorting complex required for transport. It consists of the class E vacuolar protein sorting (Vps) proteins and interacts with ubiquitinated cargoes.","definition_xrefs":["GOC:rb","PMID:12892785","PMID:12900393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ESCRT complex","termid":"GO:0036452"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"endosome membrane","termid":"GO:0010008"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01981":null,"SJAG_04349":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005768","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"ESCRT I complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"endosomal sorting complex required for transport","type":"broad"}],"termid":"GO:0000813","terms_by_termid":{"GO:0000813":null}}


id: PBO:0004204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione peroxidase Gpx1","termid":"PBO:0004204"}


id: PBO:0085210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Oxysterol-binding  phosphatidylserine transferase; family members have overlapping, redundant functions in sterol metabolism and collectively perform a function essential for viability; GFP-fusion protein localizes to the cell periphery; overexpression extends lifespan by promoting vacuolar fusion; OSH6 has a paralog, OSH7, that arose from the whole genome duplication","termid":"PBO:0085210"}


id: PBO:0070206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 133 pseudogene","termid":"PBO:0070206"}


id: GO:0062233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of F2-isoprostane.","definition_xrefs":["PMID:16371369","PMID:25449649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosanoid catabolic process","termid":"GO:1901523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"F2-isoprostane catabolic process","termid":"GO:0062233"}


id: PBO:0076767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor domain containing 6","termid":"PBO:0076767"}


id: SO:0001615
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant with in the CDS that causes out of frame elongation of the resulting polypeptide sequence at the N terminus.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated_polypeptide_N_terminal","termid":"SO:0001611"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongated_out_of_frame_polypeptide_N_terminal","synonyms":[{"name":"elongated out of frame N terminal","type":"exact"}],"termid":"SO:0001615"}


id: PBO:0044129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 15","termid":"PBO:0044129"}


id: MOD:00903
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-asparagine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified L-asparagine residue","synonyms":[{"name":"ModAsn","type":"exact"}],"termid":"MOD:00903"}


id: PR:Q10110
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA polymerase I-specific transcription initiation factor RRN3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12790:SF0","OMA:SCHPO00921","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I-specific transcription initiation factor rrn3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.11c","secondary_identifiers":["UniProtKB:Q10110"],"synonyms":[{"name":"Spom972h-RRN3","type":"exact"}],"termid":"PR:Q10110"}


id: GO:0090556
data:
  {"annotated_genes":["SJAG_01731","SJAG_05209","SJAG_02897","SJAG_01945"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96245,99747,101294,114356],"is_not":false,"summary":null,"term":"GO:0090556"}]},"cv_name":"molecular_function","definition":"Catalysis of the movement of phosphatidylserine from the cytosolic to the exoplasmic leaflet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["RHEA:38567","PMID:16452632","PMID:20224745","GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transporter activity","termid":"GO:0005548"},{"relation_name":"is_a","term_name":"floppase activity","termid":"GO:0140328"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01731":null,"SJAG_01945":null,"SJAG_02897":null,"SJAG_05209":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140303","GO:0005215"],"is_obsolete":false,"name":"phosphatidylserine floppase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATPase-coupled phosphatidylserine transporter activity","type":"broad"},{"name":"ATPase-dependent phosphatidylserine transporter activity","type":"broad"},{"name":"phosphatidylserine floppase activity (cytosolic to exoplasmic leaflet)","type":"exact"},{"name":"phosphatidylserine-translocating ATPase activity","type":"broad"}],"termid":"GO:0090556","terms_by_termid":{"GO:0090556":null}}


id: GO:0005591
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen heterotrimer containing type VIII alpha chains; [alpha1(VIII)2]alpha2(VIII) and alpha1(VIII)[alpha2(VIII)]2 trimers have been observed; type VIII collagen triple helices associate to form regular hexagonal nets.","definition_xrefs":["ISBN:0721639976","PMID:21421911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"network-forming collagen trimer","termid":"GO:0098642"},{"relation_name":"part_of","term_name":"basement membrane","termid":"GO:0005604"},{"relation_name":"part_of","term_name":"interstitial hexagonal collagen network","termid":"GO:0098646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"collagen type VIII trimer","termid":"GO:0005591"}


id: SO:0002152
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that falls downstream of a transcript, but within the genic region of the gene due to alternately transcribed isoforms.","definition_xrefs":["SO:ke","NCBI:dm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_variant","termid":"SO:0001564"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genic_downstream_transcript_variant","synonyms":[{"name":"genic 3 prime transcript variant","type":"exact"},{"name":"genic 3' transcript variant","type":"exact"},{"name":"genic downstream transcript variant","type":"exact"}],"termid":"SO:0002152"}


id: PBO:0083649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endo-beta-1,3-glucanase; major protein of the cell wall, involved in cell wall maintenance; involved in incorporation of newly synthesized mannoprotein molecules into the cell wall","termid":"PBO:0083649"}


id: GO:0051845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any mechanism of immune avoidance that does not directly interfere with the symbiont immune system. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:12439615"],"gene_count":0,"genotype_count":0,"name":"obsolete passive evasion of symbiont immune response (obsolete GO:0051845)","synonyms":[{"name":"passive evasion of symbiont immune response","type":"exact"},{"name":"passive immune evasion","type":"broad"}],"termid":"GO:0051845"}


id: FYPO:0001505
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylserine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phospholipid level","termid":"FYPO:0001288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular phosphatidylserine level","synonyms":[{"name":"increased cellular PS level","type":"exact"},{"name":"increased cellular phosphatidyl-L-serine level","type":"exact"},{"name":"increased cellular phosphatidylserine level during mitotic cell cycle","type":"related"},{"name":"increased cellular phosphatidylserine level during vegetative growth","type":"exact"},{"name":"increased phosphatidylserine accumulation","type":"related"}],"termid":"FYPO:0001505"}


id: GO:0150138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of interleukin-37 production.","definition_xrefs":["GOC:aruk","PMID:30362558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-37 production","termid":"GO:0150136"},{"relation_name":"negatively_regulates","term_name":"interleukin-37 production","termid":"GO:0150137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-37 production","synonyms":[{"name":"negative regulation of interleukin-37 biosynthetic process","type":"narrow"}],"termid":"GO:0150138"}


id: PBO:0002111
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin B Six Uptake","termid":"PBO:0002111"}


id: PBO:0085695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in resistance to desiccation stress; Stf2p exhibits antioxidant properties, and its overexpression prevents ROS accumulation and apoptosis; binds to F0 sector of mitochondrial F1F0 ATPase in vitro and may modulate the inhibitory action of Inh1p and Stf1p; protein abundance increases in response to DNA replication stress; STF2 has a paralog, TMA10, that arose from the whole genome duplication","termid":"PBO:0085695"}


id: GO:0005180
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide hormone (obsolete GO:0005180)","synonyms":[{"name":"peptide hormone","type":"exact"}],"termid":"GO:0005180"}


id: PBO:0088317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box/WD repeat protein Pof1","termid":"PBO:0088317"}


id: GO:0018272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-lysine to form N6-pyridoxal phosphate-L-lysine.","definition_xrefs":["RESID:AA0119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"},{"relation_name":"is_a","term_name":"protein-pyridoxal-5-phosphate linkage","termid":"GO:0018352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-pyridoxal-5-phosphate linkage via peptidyl-N6-pyridoxal phosphate-L-lysine","termid":"GO:0018272"}


id: MONDO:0011272
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the EYS gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"EYS-related retinopathy","termid":"MONDO:0800391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 25","secondary_identifiers":["OMIM:602772","ICD10CM:H35.5","DOID:0110384","GARD:10384","MEDGEN:350427","MESH:C566425","UMLS:C1864446"],"synonyms":[{"name":"EYS retinitis pigmentosa","type":"exact"},{"name":"RP 25","type":"related"},{"name":"RP25","type":"exact"},{"name":"retinitis pigmentosa 25","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in EYS","type":"exact"},{"name":"retinitis pigmentosa type 25","type":"exact"}],"termid":"MONDO:0011272","xrefs":{"Monarch":{"xref_id":"0011272"}}}


id: PBO:0071054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 56","termid":"PBO:0071054"}


id: MONDO:0020327
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete classic Hodgkin lymphoma, nodular sclerosis type (obsolete MONDO:0020327)","termid":"MONDO:0020327","xrefs":{"Monarch":{"xref_id":"0020327"}}}


id: GO:1990838
data:
  {"annotated_genes":["SJAG_01798"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70118],"is_not":false,"summary":null,"term":"GO:1990838"}]},"cv_name":"molecular_function","definition":"Catalysis of 3' exonucleolytic cleavage of poly(U), to form poly(U)-N containing a 3' uridine cyclic phosphate (U>P).","definition_xrefs":["PMID:23022480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-5'-RNA exonuclease activity","termid":"GO:0000175"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01798":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0004527"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0004527","GO:0140098","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"poly(U)-specific exoribonuclease activity, producing 3' uridine cyclic phosphate ends","references_by_uniquename":{"GO_REF:0000104":null},"termid":"GO:1990838","terms_by_termid":{"GO:1990838":null}}


id: PBO:0055348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2777","termid":"PBO:0055348"}


id: PBO:0046406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPC1 antisense RNA 2","termid":"PBO:0046406"}


id: PBO:0039093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AT-hook containing transcription factor 1 pseudogene 1","termid":"PBO:0039093"}


id: GO:0150048
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse of a granule cell fiber onto the dendrites of a Purkinje cell in cerebellum.","definition_xrefs":["GOC:bc","GOC:aruk","PMID:12427822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric, glutamatergic, excitatory synapse","termid":"GO:0098985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cerebellar granule cell to Purkinje cell synapse","synonyms":[{"name":"cerebellar parallel fiber to Purkinje cell synapse","type":"exact"}],"termid":"GO:0150048"}


id: PBO:0081124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFHX2 antisense RNA 1","termid":"PBO:0081124"}


id: PBO:0069483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 750, pseudogene","termid":"PBO:0069483"}


id: GO:0001801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of type IIb hypersensitivity, a type of inflammatory response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type IIb hypersensitivity","termid":"GO:0001799"},{"relation_name":"is_a","term_name":"positive regulation of type II hypersensitivity","termid":"GO:0002894"},{"relation_name":"positively_regulates","term_name":"type IIb hypersensitivity","termid":"GO:0001795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of type IIb hypersensitivity","synonyms":[{"name":"activation of type IIb hypersensitivity","type":"narrow"},{"name":"stimulation of type IIb hypersensitivity","type":"narrow"},{"name":"up regulation of type IIb hypersensitivity","type":"exact"},{"name":"up-regulation of type IIb hypersensitivity","type":"exact"},{"name":"upregulation of type IIb hypersensitivity","type":"exact"}],"termid":"GO:0001801"}


id: PBO:0049805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 1","termid":"PBO:0049805"}


id: FYPO:0004412
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone during anaphase does not occur. The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap. Anaphase is the stage of mitosis in which chromosomes separate and migrate towards the poles of the spindle.","definition_xrefs":["GO:0000090","PomBase:mah","GO:1990023","GO:1902967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to mitotic spindle midzone","termid":"FYPO:0003484"},{"relation_name":"is_a","term_name":"abolished protein localization to mitotic spindle during mitosis","termid":"FYPO:0004754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to mitotic spindle midzone during anaphase","synonyms":[{"name":"abolished protein localization to spindle midzone during anaphase during mitotic cell cycle","type":"exact"},{"name":"protein absent from mitotic spindle midzone during anaphase","type":"related"},{"name":"protein localisation to mitotic spindle midzone abolished during anaphase","type":"exact"},{"name":"protein localization to mitotic spindle midzone abolished during anaphase","type":"exact"},{"name":"protein localization to spindle midzone abolished during anaphase during vegetative growth","type":"exact"}],"termid":"FYPO:0004412"}


id: FYPO:0005051
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to regions of chromatin containing genes that can be transcribed by RNA polymerase II is decreased when the cell is subject to nitrogen starvation.","definition_xrefs":["PMID:20605454","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin","termid":"FYPO:0001679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to chromatin at RNA polymerase II-regulated genes during nitrogen starvation","synonyms":[{"name":"decreased protein localisation to chromatin at RNA polymerase II-regulated genes during nitrogen starvation","type":"exact"},{"name":"decreased protein localization to chromatin at RNA polymerase II-regulated genes during nitrogen depletion","type":"exact"},{"name":"decreased protein localization to chromatin at RNA polymerase II-regulated genes during nitrogen deprivation","type":"exact"},{"name":"decreased protein localization to chromatin at polymerase II regulated genes during nitrogen starvation","type":"exact"},{"name":"reduced protein localization to chromatin at RNA polymerase II-regulated genes during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005051"}


id: MONDO:0011923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any osteoarthritis in which the cause of the disease is a mutation in the ASPN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoarthritis susceptibility 3","secondary_identifiers":["MEDGEN:382650","UMLS:C2675609","OMIM:607850"],"synonyms":[{"name":"ASPN osteoarthritis","type":"exact"},{"name":"OS3","type":"related"},{"name":"osteoarthritis caused by mutation in ASPN","type":"exact"},{"name":"osteoarthritis of knee/hip","type":"related"},{"name":"osteoarthritis susceptibility 3","type":"exact"},{"name":"osteoarthritis susceptibility type 3","type":"exact"}],"termid":"MONDO:0011923","xrefs":{"Monarch":{"xref_id":"0011923"}}}


id: MONDO:0003257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A low-grade neoplasm that arises from the neurohypophysis. It includes the granular cell tumor of the neurohypophysis and pituicytoma.","definition_xrefs":["NCIT:C7157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pituitary tumor","termid":"MONDO:0017611"},{"relation_name":"is_a","term_name":"neuroendocrine disorder","termid":"MONDO:0100070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posterior pituitary gland neoplasm","secondary_identifiers":["DOID:5048","MEDGEN:235368","UMLS:C1334957"],"synonyms":[{"name":"Neurohypophysis neoplasm","type":"exact"},{"name":"Neurohypophysis tumor","type":"exact"},{"name":"Neurohypophysis tumour","type":"exact"},{"name":"PITUICYTOMA, benign","type":"exact"},{"name":"neoplasm of neurohypophysis","type":"exact"},{"name":"neurohypophysis neoplasm","type":"exact"},{"name":"neurohypophysis neoplasm (disease)","type":"exact"},{"name":"neurohypophysis tumor","type":"exact"},{"name":"neurohypophysis tumour","type":"exact"},{"name":"posterior pituitary gland neoplasm","type":"exact"},{"name":"posterior pituitary gland tumor","type":"exact"},{"name":"posterior pituitary gland tumour","type":"exact"},{"name":"posterior pituitary neoplasm","type":"exact"},{"name":"posterior pituitary tumor","type":"exact"},{"name":"posterior pituitary tumour","type":"exact"},{"name":"tumor of neurohypophysis","type":"exact"},{"name":"tumour of neurohypophysis","type":"exact"}],"termid":"MONDO:0003257","xrefs":{"Monarch":{"xref_id":"0003257"}}}


id: MONDO:0013816
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete palmoplantar keratoderma, mutilating, with periorificial keratotic plaques (obsolete MONDO:0013816)","termid":"MONDO:0013816","xrefs":{"Monarch":{"xref_id":"0013816"}}}


id: PBO:0027039
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_mitotically_up-regulated_gene_mRNA_during_vegetative_growth","termid":"PBO:0027039"}


id: GO:0009824
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AMP + dimethylallyl diphosphate = N(6)-(dimethylallyl)adenosine 5'-phosphate + diphosphate.","definition_xrefs":["RHEA:15285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016765","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"AMP dimethylallyltransferase activity","secondary_identifiers":["MetaCyc:RXN-4307","EC:2.5.1.27","KEGG_REACTION:R04038"],"synonyms":[{"name":"2-isopentenyl-diphosphate:AMP 2-isopentenyltransferase activity","type":"exact"},{"name":"2-isopentenyl-diphosphate:AMP delta2-isopentenyltransferase activity","type":"exact"},{"name":"adenylate dimethylallyltransferase (AMP-dependent) activity","type":"exact"},{"name":"adenylate dimethylallyltransferase activity","type":"related"},{"name":"adenylate isopentenyltransferase activity","type":"broad"},{"name":"cytokinin synthase activity","type":"broad"},{"name":"dimethylallyl-diphosphate:AMP dimethylallyltransferase activity","type":"related"},{"name":"isopentenyltransferase activity","type":"broad"}],"termid":"GO:0009824"}


id: PBO:0067531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 675, pseudogene","termid":"PBO:0067531"}


id: PBO:0057632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1207","termid":"PBO:0057632"}


id: PBO:0066864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 164","termid":"PBO:0066864"}


id: GO:0022617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in the breakdown of the extracellular matrix.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"},{"relation_name":"is_a","term_name":"extracellular matrix organization","termid":"GO:0030198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"extracellular matrix disassembly","secondary_identifiers":["Reactome:R-HSA-1474228"],"termid":"GO:0022617"}


id: MOD:00260
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-threonine residue and the 5'-end of DNA through a phosphodiester bond to form O-(phospho-5'-DNA)-L-threonine.","definition_xrefs":["PubMed:3081736","RESID:AA0255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribonucleic acid linked residue","termid":"MOD:00750"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(phospho-5'-DNA)-L-threonine","synonyms":[{"name":"(S)-2-amino-3-(5'-deoxyribonucleic acid phosphonoxy)butanoic acid","type":"exact"},{"name":"O-(phospho-5'-DNA)-L-threonine","type":"exact"},{"name":"O3-(phospho-5'-DNA)-L-threonine","type":"exact"},{"name":"O3-L-threonine 5'-DNA phosphodiester","type":"exact"}],"termid":"MOD:00260"}


id: PBO:0116630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF GTPase 4 pseudogene 3","termid":"PBO:0116630"}


id: PR:O14352
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lsm4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNA-associated Sm-like protein LSm4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.06","synonyms":[{"name":"Spom972h-lsm4","type":"exact"}],"termid":"PR:O14352"}


id: GO:0140511
data:
  {"annotated_genes":["SJAG_00680"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95647],"is_not":false,"summary":null,"term":"GO:0140511"}]},"cv_name":"cellular_component","definition":"Either of the regions of a mitotic nuclear bridge proximal to the main portion of each daughter nucleus. The nuclear envelope in the stalk regions is depleted of nuclear pore complexes.","definition_xrefs":["PMID:32848252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"mitotic nuclear bridge","termid":"GO:0140510"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00680":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"mitotic nuclear bridge stalk","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140511","terms_by_termid":{"GO:0140511":null}}


id: PBO:0043568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type VI alpha 5 chain","termid":"PBO:0043568"}


id: SO:0000099
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene from proviral sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"proviral_location","termid":"SO:0000751"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proviral_gene","synonyms":[{"name":"proviral gene","type":"exact"}],"termid":"SO:0000099"}


id: PBO:0003217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase subunit Sec11 (predicted)","termid":"PBO:0003217"}


id: GO:0102253
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: neoagarobiose + H2O = 3,6-anhydro-alpha-L-galactopyranose + beta-D-galactoside.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete neoagarobiose 1,3-alpha-3,6-anhydro-L-galactosidase activity (obsolete GO:0102253)","termid":"GO:0102253"}


id: PBO:0054179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1553","termid":"PBO:0054179"}


id: PBO:0076736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-complex 10 like 2, pseudogene","termid":"PBO:0076736"}


id: MONDO:0100070
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that affects the neuroendocrine gland, any of the organized aggregations of cells that function as secretory or excretory organs and that release hormones in response to neural stimuli.","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroendocrine disorder","secondary_identifiers":["UMLS:C0541403","MEDGEN:1843486"],"synonyms":[{"name":"neuroendocrine system disease","type":"exact"}],"termid":"MONDO:0100070","xrefs":{"Monarch":{"xref_id":"0100070"}}}


id: PBO:0060977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroguidin","termid":"PBO:0060977"}


id: PBO:0049012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylphosphatidylinositol specific phospholipase D1","termid":"PBO:0049012"}


id: PR:O13861
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tcd1 gene.","definition_xrefs":["UniProtKB:O13861","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA threonylcarbamoyladenosine dehydratase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1A6.10","synonyms":[{"name":"Spom972h-tcd1","type":"exact"},{"name":"t(6)A37 dehydratase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13861"}


id: PBO:0054150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1517","termid":"PBO:0054150"}


id: PBO:0051493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin superfamily member 10","termid":"PBO:0051493"}


id: PBO:0028968
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_superoxide_dismutase_activity","termid":"PBO:0028968"}


id: MONDO:0000202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Heimler syndrome (obsolete MONDO:0000202)","termid":"MONDO:0000202","xrefs":{"Monarch":{"xref_id":"0000202"}}}


id: PBO:0000390
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression repressed by glucose","termid":"PBO:0000390"}


id: PBO:0057791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3117","termid":"PBO:0057791"}


id: FYPO:0002573
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Ssb1 accumulates is greater than normal.","definition_xrefs":["PomBase:mah","PMID:22927644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased number of Ssb1 foci","synonyms":[{"name":"increased number of RPA foci","type":"exact"},{"name":"increased number of Rad11 foci","type":"exact"},{"name":"increased number of Rpa1 foci","type":"exact"},{"name":"increased number of Ssb1 foci during mitotic cell cycle","type":"related"},{"name":"increased number of Ssb1 foci during vegetative growth","type":"exact"}],"termid":"FYPO:0002573"}


id: PBO:0034208
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-developmentally_preceded_by","termid":"PBO:0034208"}


id: PBO:0082393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of C-terminal domain kinase I (CTDK-I); which phosphorylates both RNA pol II subunit Rpo21p to affect transcription and pre-mRNA 3' end processing, and ribosomal protein Rps2p to increase translational fidelity; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0082393"}


id: GO:0021761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the limbic system over time from its initial formation until its mature state. The limbic system is a collection of structures in the brain involved in emotion, motivation and emotional aspects of memory.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:jid","GOC:dph","GO_REF:0000021","ISBN:0878937420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"},{"relation_name":"part_of","term_name":"forebrain development","termid":"GO:0030900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"limbic system development","termid":"GO:0021761"}


id: FYECO:0000240
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were subjected to nitrogen starvation for more than 7 days.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping starvation and timing","termid":"FYECO:0000239"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":">7 days nitrogen starvation","termid":"FYECO:0000240"}


id: PATO:0001909
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A nucleate quality inhering in a bearer by virtue of the bearer's having three nuclei.","definition_xrefs":["thefreedictionary:thefreedictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multinucleate","termid":"PATO:0001908"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trinucleate","termid":"PATO:0001909"}


id: GO:1900262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of DNA-directed DNA polymerase activity.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA-directed DNA polymerase activity (obsolete GO:1900262)","synonyms":[{"name":"regulation of DNA duplicase activity","type":"exact"},{"name":"regulation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"regulation of DNA polymerase I","type":"narrow"},{"name":"regulation of DNA polymerase II","type":"narrow"},{"name":"regulation of DNA polymerase III","type":"narrow"},{"name":"regulation of DNA polymerase V activity","type":"narrow"},{"name":"regulation of DNA polymerase alpha","type":"narrow"},{"name":"regulation of DNA polymerase beta","type":"narrow"},{"name":"regulation of DNA polymerase gamma","type":"narrow"},{"name":"regulation of DNA replicase activity","type":"exact"},{"name":"regulation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"regulation of Klenow fragment","type":"narrow"},{"name":"regulation of Taq DNA polymerase","type":"narrow"},{"name":"regulation of Taq Pol I","type":"narrow"},{"name":"regulation of Tca DNA polymerase","type":"narrow"},{"name":"regulation of alpha DNA polymerase activity","type":"narrow"},{"name":"regulation of beta DNA polymerase activity","type":"narrow"},{"name":"regulation of delta DNA polymerase activity","type":"narrow"},{"name":"regulation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"regulation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"regulation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"regulation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"regulation of duplicase","type":"broad"},{"name":"regulation of epsilon DNA polymerase activity","type":"narrow"},{"name":"regulation of eta DNA polymerase activity","type":"narrow"},{"name":"regulation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"regulation of iota DNA polymerase activity","type":"narrow"},{"name":"regulation of kappa DNA polymerase activity","type":"narrow"},{"name":"regulation of lambda DNA polymerase activity","type":"narrow"},{"name":"regulation of mu DNA polymerase activity","type":"narrow"},{"name":"regulation of nu DNA polymerase activity","type":"narrow"},{"name":"regulation of sequenase","type":"related"},{"name":"regulation of sigma DNA polymerase activity","type":"narrow"},{"name":"regulation of theta DNA polymerase activity","type":"narrow"},{"name":"regulation of zeta DNA polymerase activity","type":"narrow"}],"termid":"GO:1900262"}


id: PBO:0044308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 reductase 3","termid":"PBO:0044308"}


id: GO:0006380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete poly-A binding (obsolete GO:0006380)","synonyms":[{"name":"poly-A binding","type":"exact"}],"termid":"GO:0006380"}


id: PBO:0002204
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-Alpha-Acetyltransferase","termid":"PBO:0002204"}


id: GO:0050462
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphoenolpyruvate + N-acetyl-D-mannosamine + H2O = phosphate + N-acetylneuraminate.","definition_xrefs":["EC:2.5.1.56","MetaCyc:N-ACETYLNEURAMINATE-SYNTHASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016765"],"is_obsolete":false,"name":"N-acetylneuraminate synthase activity","secondary_identifiers":["RHEA:19273"],"synonyms":[{"name":"(NANA)condensing enzyme activity","type":"related"},{"name":"N-acetylneuraminate pyruvate-lyase (pyruvate-phosphorylating) activity","type":"related"},{"name":"N-acetylneuraminic acid synthase activity","type":"related"},{"name":"NeuAc synthase activity","type":"related"},{"name":"phosphoenolpyruvate:N-acetyl-D-mannosamine C-(1-carboxyvinyl)transferase (phosphate-hydrolysing, 2-carboxy-2-oxoethyl-forming)","type":"related"}],"termid":"GO:0050462"}


id: PBO:0060776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B8 pseudogene 2","termid":"PBO:0060776"}


id: MONDO:0001969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of defective gonadal development in patients with a wide spectrum of chromosomal mosaic variants. Their karyotypes are of partial sex chromosome monosomy resulting from an absence or an abnormal second sex chromosome (X or Y). Karyotypes include 45,X/46,xx; 45,X/46,xx/47,xxx; 46,xxp-; 45,X/46,xy; 45,X/47,xyy; 46,xypi; etc. The spectrum of phenotypes may range from phenotypic female to phenotypic male including variations in gonads and internal and external genitalia, depending on the ratio in each gonad of 45,X primordial germ cells to those with normal 46,xx or 46,xy constitution.","definition_xrefs":["MESH:D006060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Turner syndrome","termid":"MONDO:0019499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"mixed gonadal dysgenesis","secondary_identifiers":["MEDGEN:6654","SCTID:83579008","NANDO:2200388","UMLS:C0018055","GARD:2539","DOID:14449"],"synonyms":[{"name":"gonadal dysgenesis mixed","type":"related"}],"termid":"MONDO:0001969","xrefs":{"Monarch":{"xref_id":"0001969"}}}


id: FYPO:0002245
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of monosaccharide binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abnormal monosaccharide binding","termid":"FYPO:0002245"}


id: MONDO:0022639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cantu Sanchez-Corona Garcia-Cruz syndrome","termid":"MONDO:0022639","xrefs":{"Monarch":{"xref_id":"0022639"}}}


id: MONDO:0800397
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited retinopathy caused by bi-allelic variants in the GRM6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"GRM6-related retinopathy","termid":"MONDO:0800397","xrefs":{"Monarch":{"xref_id":"0800397"}}}


id: GO:0010588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Vascular tissue pattern formation as it occurs in the cotyledon of vascular plants.","definition_xrefs":["PMID:10559439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylem and phloem pattern formation","termid":"GO:0010051"},{"relation_name":"part_of","term_name":"cotyledon morphogenesis","termid":"GO:0048826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cotyledon vascular tissue pattern formation","termid":"GO:0010588"}


id: MONDO:0014325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any pachyonychia congenita in which the cause of the disease is a mutation in the KRT6B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pachyonychia congenita","termid":"MONDO:0016471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pachyonychia congenita 4","secondary_identifiers":["GARD:16006","MEDGEN:811524","UMLS:C3714949","OMIM:615728"],"synonyms":[{"name":"KRT6B pachyonychia congenita","type":"exact"},{"name":"PC4","type":"related"},{"name":"pachyonychia congenita 4","type":"exact"},{"name":"pachyonychia congenita caused by mutation in KRT6B","type":"exact"},{"name":"pachyonychia congenita type 4","type":"exact"}],"termid":"MONDO:0014325","xrefs":{"Monarch":{"xref_id":"0014325"}}}


id: PBO:0042932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell growth regulator with EF-hand domain 1","termid":"PBO:0042932"}


id: PBO:0040686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCAS3 microtubule associated cell migration factor","termid":"PBO:0040686"}


id: MONDO:0003307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuroma","termid":"MONDO:0002173"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple mucosal neuroma","secondary_identifiers":["MEDGEN:233722","DOID:5155","NCIT:C6559","UMLS:C1334828"],"synonyms":[{"name":"multiple mucosal neuromas","type":"related"}],"termid":"MONDO:0003307","xrefs":{"Monarch":{"xref_id":"0003307"}}}


id: PBO:0001386
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"function depends on recruitment to the spindle pole body","termid":"PBO:0001386"}


id: PBO:0054882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2296","termid":"PBO:0054882"}


id: PBO:0004646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA thioesterase (predicted)","termid":"PBO:0004646"}


id: PBO:0086880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transcription factor; has homolog in Kluyveromyces lactis","termid":"PBO:0086880"}


id: MONDO:0013984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the OTOGL gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 84B","secondary_identifiers":["DOID:0110530","GARD:22647","MEDGEN:767073","OMIM:614944","UMLS:C3554159"],"synonyms":[{"name":"DFNB84B","type":"narrow"},{"name":"OTOGL autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 84B","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 84B","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in OTOGL","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 84B","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 84B","type":"exact"},{"name":"deafness, autosomal recessive 84B","type":"narrow"},{"name":"deafness, autosomal recessive 84b","type":"narrow"},{"name":"deafness, autosomal recessive type 84B","type":"narrow"}],"termid":"MONDO:0013984","xrefs":{"Monarch":{"xref_id":"0013984"}}}


id: SOFP:reported_na_change
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reported_na_change","termid":"SOFP:reported_na_change"}


id: PBO:0056202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member A10","termid":"PBO:0056202"}


id: GO:0072282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a metanephric nephron tubule are generated and organized. A metanephric nephron tubule is an epithelial tube that is part of the metanephric nephron, the functional part of the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule morphogenesis","termid":"GO:0072078"},{"relation_name":"is_a","term_name":"metanephric tubule morphogenesis","termid":"GO:0072173"},{"relation_name":"part_of","term_name":"metanephric nephron tubule development","termid":"GO:0072234"},{"relation_name":"part_of","term_name":"metanephric nephron morphogenesis","termid":"GO:0072273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric nephron tubule morphogenesis","termid":"GO:0072282"}


id: PBO:0045485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DS cell adhesion molecule like 1","termid":"PBO:0045485"}


id: GO:0018325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient phosphorylation of peptidyl-cysteine to form S-phospho-L-cysteine.","definition_xrefs":["RESID:AA0034"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via S-phospho-L-cysteine (obsolete GO:0018325)","termid":"GO:0018325"}


id: GO:0022021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of caudal ganglionic eminence cells, resulting in the expansion of a cell population.","definition_xrefs":["GOC:cls","GOC:dph","GOC:dgh","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subpallium cell proliferation in forebrain","termid":"GO:0022012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"caudal ganglionic eminence cell proliferation","termid":"GO:0022021"}


id: GO:0102248
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 a 1,2-diacyl-sn-glycerol = a triacyl-sn-glycerol + a 2-monoglyceride.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete diacylglycerol transacylase activity (obsolete GO:0102248)","termid":"GO:0102248"}


id: FYPO:0004672
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, is elongated, and contains a nucleus that is broken into small fragments.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"fragmented nucleus during vegetative growth","termid":"FYPO:0001919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000005","FYPO:0001985","FYPO:0000004","FYPO:0002403"],"is_obsolete":false,"name":"inviable elongated vegetative cell with fragmented nucleus","synonyms":[{"name":"elongated inviable cell with fragmented nucleus","type":"exact"},{"name":"inviable elongated cell with fragmented nucleus during vegetative growth","type":"exact"},{"name":"inviable elongated vegetative cell with fragmented DNA","type":"related"},{"name":"inviable elongated vegetative cell with fragmented nucleus during mitotic cell cycle","type":"related"},{"name":"lethal; elongated vegetative cell with fragmented nucleus","type":"exact"}],"termid":"FYPO:0004672"}


id: FYPO:0001847
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ferric-chelate reductase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"abnormal ferric-chelate reductase activity","termid":"FYPO:0001847"}


id: FYPO:0007300
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein aggregate center formation does not occur. Protein aggregate centers are composed of chaperones and misfolded proteins, and are reversibly formed in the nucleus and cytosol to shield thermosensitive proteins from degradation until conditions allow disaggregation and refolding.","definition_xrefs":["PMID:32075773","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal protein aggregate center formation","termid":"FYPO:0007298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein aggregate center formation","synonyms":[{"name":"abolished PAC formation","type":"exact"},{"name":"abolished protein aggregate center formation during mitotic cell cycle","type":"related"},{"name":"abolished protein aggregate center formation during vegetative growth","type":"exact"},{"name":"abolished protein aggregate centre formation","type":"exact"},{"name":"protein aggregate center formation abolished","type":"exact"}],"termid":"FYPO:0007300"}


id: PR:Q9P3U1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ELAV-like protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01452","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C328.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC328.05","secondary_identifiers":["UniProtKB:Q9P3U1"],"synonyms":[{"name":"Spom972h-ELAVL2","type":"exact"}],"termid":"PR:Q9P3U1"}


id: MONDO:0015219
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A central nervous system malformation that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic central nervous system malformation (obsolete MONDO:0015219)","secondary_identifiers":["Orphanet:108989"],"synonyms":[{"name":"isolated central nervous system malformation","type":"exact"},{"name":"nonsyndromic central nervous system malformation","type":"exact"}],"termid":"MONDO:0015219","xrefs":{"Monarch":{"xref_id":"0015219"}}}


id: GO:0160270
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1,2-diacyl-sn-glycero-3-phospho-(1D-myo-inositol 4-phosphate)(out) + a 1,2-diacyl-sn-glycero-3-phospho-L-serine(in) = a 1,2-diacyl-sn-glycero-3-phospho-(1D-myo-inositol 4-phosphate)(in) + a 1,2-diacyl-sn-glycero-3-phospho-L-serine(out). This reaction results in the exchange of phosphatidylserine (PS) for phosphatidylinositol-4-phosphate (PI(4)P) between membranes.","definition_xrefs":["PMID:34249917","PMID:39106189","RHEA:81667"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transfer activity","termid":"GO:0120014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0120013"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0120013"],"is_obsolete":false,"name":"phosphatidylserine-phosphatidylinositol-4-phosphate exchange activity","termid":"GO:0160270"}


id: GO:2000788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of venous endothelial cell fate commitment.","definition_xrefs":["PMID:11585794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate commitment","termid":"GO:0010454"},{"relation_name":"is_a","term_name":"negative regulation of blood vessel endothelial cell differentiation","termid":"GO:0110059"},{"relation_name":"is_a","term_name":"regulation of venous endothelial cell fate commitment","termid":"GO:2000787"},{"relation_name":"negatively_regulates","term_name":"venous endothelial cell fate commitment","termid":"GO:0060845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of venous endothelial cell fate commitment","termid":"GO:2000788"}


id: GO:0014739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of muscle hyperplasia.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle hyperplasia","termid":"GO:0014738"},{"relation_name":"is_a","term_name":"positive regulation of muscle adaptation","termid":"GO:0014744"},{"relation_name":"positively_regulates","term_name":"muscle hyperplasia","termid":"GO:0014900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of muscle hyperplasia","termid":"GO:0014739"}


id: PBO:0082609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Co-chaperone that stimulates HSP70 protein Ssc1p ATPase activity; involved in protein folding/refolding in the mitochodrial matrix; required for proteolysis of misfolded proteins; member of the HSP40 (DnaJ) family of chaperones","termid":"PBO:0082609"}


id: PBO:0082294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arginosuccinate synthetase; catalyzes the formation of L-argininosuccinate from citrulline and L-aspartate in the arginine biosynthesis pathway; potential Cdc28p substrate","termid":"PBO:0082294"}


id: MONDO:0010829
data:
  {"annotated_genes":["SJAG_00737","SJAG_03258"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87851,87852],"is_not":false,"summary":null,"term":"MONDO:0010829"}]},"cv_name":"mondo","definition":"CARASIL is a hereditary cerebral small vessel disease characterized by early-onset gait disturbances, premature scalp alopecia, ischemic stroke, acute mid to lower back pain and progressive cognitive disturbances leading to severe dementia.","definition_xrefs":["Orphanet:199354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral arteriopathy, autosomal dominant, with subcortical infarcts and leukoencephalopathy, type 2","termid":"MONDO:0014768"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_03258":null},"genotype_count":0,"is_obsolete":false,"name":"CARASIL syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:703219008","UMLS:C1838577","MEDGEN:325051","icd11.foundation:984450655","MESH:C563990","GARD:10424","NORD:888","NANDO:1200544","OMIM:600142"],"synonyms":[{"name":"CARASIL","type":"exact"},{"name":"Maeda syndrome","type":"exact"},{"name":"cerebral arteriopathy, autosomal recessive, with subcortical infarcts and leukoencephalopathy","type":"related"},{"name":"cerebral autosomal recessive arteriopathy with subcortical infarcts and leukoencephalopathy","type":"exact"},{"name":"cerebrovascular disease with thin skin, alopecia, and disc disease","type":"related"},{"name":"cerebrovascular disease with thin skin, alopecia, and disk disease","type":"related"},{"name":"subcortical vascular encephalopathy, progressive","type":"related"}],"termid":"MONDO:0010829","terms_by_termid":{"MONDO:0010829":null},"xrefs":{"Monarch":{"xref_id":"0010829"}}}


id: GO:0016358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:22683681","GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection development","termid":"GO:0031175"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendrite development","termid":"GO:0016358"}


id: PBO:0039380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine monophosphate deaminase 3","termid":"PBO:0039380"}


id: GO:1904892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of receptor signaling via STAT.","definition_xrefs":["GOC:TermGenie","PMID:24587195","GO_REF:0000058","GOC:rjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"cell surface receptor signaling pathway via STAT","termid":"GO:0097696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of receptor signaling pathway via STAT","synonyms":[{"name":"regulation of STAT signalling pathway","type":"exact"},{"name":"regulation of kinase activated-STAT cascade","type":"exact"},{"name":"regulation of kinase-STAT cascade","type":"exact"}],"termid":"GO:1904892"}


id: MONDO:0017082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated encephalocele","termid":"MONDO:0016057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"basal encephalocele","secondary_identifiers":["icd11.foundation:533416539","Orphanet:268829","MEDGEN:868771","UMLS:C4023176","GARD:20971"],"termid":"MONDO:0017082","xrefs":{"Monarch":{"xref_id":"0017082"}}}


id: PBO:0000561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin family","termid":"PBO:0000561"}


id: GO:0016492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the tridecapeptide neurotensin to initiate a G-protein mediated change in cell activity. A G-protein is a signal transduction molecule that alternates between an inactive GDP-bound and an active GTP-bound state.","definition_xrefs":["PMID:10390649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled neurotensin receptor activity","synonyms":[{"name":"G protein coupled neurotensin receptor activity","type":"exact"},{"name":"G-protein coupled neurotensin receptor activity","type":"exact"},{"name":"neurotensin receptor activity, G protein coupled","type":"exact"},{"name":"neurotensin receptor activity, G-protein coupled","type":"exact"}],"termid":"GO:0016492"}


id: GO:0042691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of crystal cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of crystal cell differentiation","termid":"GO:0042689"},{"relation_name":"is_a","term_name":"positive regulation of hemocyte differentiation","termid":"GO:0045612"},{"relation_name":"positively_regulates","term_name":"crystal cell differentiation","termid":"GO:0042688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of crystal cell differentiation","synonyms":[{"name":"activation of crystal cell differentiation","type":"narrow"},{"name":"stimulation of crystal cell differentiation","type":"narrow"},{"name":"up regulation of crystal cell differentiation","type":"exact"},{"name":"up-regulation of crystal cell differentiation","type":"exact"},{"name":"upregulation of crystal cell differentiation","type":"exact"}],"termid":"GO:0042691"}


id: PBO:0052454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF transcription factor 5","termid":"PBO:0052454"}


id: MONDO:0100090
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital alveolar dysplasia in which the cause of the disease is a mutation in the FGF10 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital alveolar dysplasia","termid":"MONDO:0100077"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congenital alveolar dysplasia due to FGF10","synonyms":[{"name":"CAD due to FGF10","type":"exact"}],"termid":"MONDO:0100090","xrefs":{"Monarch":{"xref_id":"0100090"}}}


id: PBO:0060403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase 11, NatA catalytic subunit","termid":"PBO:0060403"}


id: FYPO:0003854
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to an oligomycin antibiotic. Cells stop growing (and may die) at a concentration of oligomycin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to oligomycin","synonyms":[{"name":"hypersensitive to oligomycin","type":"exact"},{"name":"sensitive to oligomycin during mitotic cell cycle","type":"related"},{"name":"sensitive to oligomycin during vegetative growth","type":"exact"}],"termid":"FYPO:0003854"}


id: PBO:0086485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative nucleotide sugar transporter; has similarity to Vrg4p","termid":"PBO:0086485"}


id: PBO:0089534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A-H2B chaperone Nap1","termid":"PBO:0089534"}


id: MONDO:0033331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic precocious puberty in female (obsolete MONDO:0033331)","secondary_identifiers":["Orphanet:435564"],"termid":"MONDO:0033331","xrefs":{"Monarch":{"xref_id":"0033331"}}}


id: PBO:0090832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3-H4 chaperone Spt6","termid":"PBO:0090832"}


id: PBO:0062955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 like 2A","termid":"PBO:0062955"}


id: GO:0001069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a RNA region that regulates a nucleic acid-based process. Such processes include transcription, DNA replication, and DNA repair.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulatory region nucleic acid binding","termid":"GO:0001067"},{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"regulatory region RNA binding","termid":"GO:0001069"}


id: GO:0048663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a neuron.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"neuron differentiation","termid":"GO:0030182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron fate commitment","secondary_identifiers":["GO:0042055"],"synonyms":[{"name":"neuron lineage restriction","type":"exact"},{"name":"neuronal lineage restriction","type":"exact"}],"termid":"GO:0048663"}


id: PBO:0074178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 1","termid":"PBO:0074178"}


id: PR:Q9Y7K1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peptide methionine sulfoxide reductase MsrB that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02634"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C216.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC216.04c","secondary_identifiers":["UniProtKB:Q9Y7K1"],"synonyms":[{"name":"Spom972h-msrB","type":"exact"}],"termid":"PR:Q9Y7K1"}


id: PBO:0042048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 105","termid":"PBO:0042048"}


id: GO:0035735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The bidirectional movement of large protein complexes along microtubules within a cilium that contributes to cilium assembly.","definition_xrefs":["GOC:bf","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intraciliary transport","termid":"GO:0042073"},{"relation_name":"part_of","term_name":"cilium assembly","termid":"GO:0060271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"intraciliary transport involved in cilium assembly","secondary_identifiers":["Reactome:R-HSA-5620924"],"synonyms":[{"name":"intraciliary transport involved in cilium morphogenesis","type":"related"},{"name":"intraflagellar transport","type":"broad"},{"name":"intraflagellar transport involved in cilium morphogenesis","type":"related"}],"termid":"GO:0035735"}


id: PATO:0000210
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000210 excretory function (obsolete PATO:0000210)","termid":"PATO:0000210"}


id: PBO:0078621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 69","termid":"PBO:0078621"}


id: GO:2001017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of retrograde axon cargo transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of microtubule-based movement","termid":"GO:0060632"},{"relation_name":"regulates","term_name":"retrograde axonal transport","termid":"GO:0008090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of retrograde axon cargo transport","synonyms":[{"name":"regulation of retrograde axonal transport","type":"exact"}],"termid":"GO:2001017"}


id: GO:0030002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of monoatomic anions within a cell. Monatomic anions (also called simple anions) are anions consisting of exactly one atom.","definition_xrefs":["GOC:ceb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular monoatomic ion homeostasis","termid":"GO:0006873"},{"relation_name":"is_a","term_name":"monoatomic anion homeostasis","termid":"GO:0055081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular monoatomic anion homeostasis","synonyms":[{"name":"cellular anion homeostasis","type":"broad"},{"name":"cellular monoatomic anion homeostasis","type":"exact"}],"termid":"GO:0030002"}


id: GO:0050122
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-D-glucosamine + H2O + O2 = N-acetyl-D-glucosaminate + H2O2 + H+.","definition_xrefs":["EC:1.1.3.29","RHEA:13029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"N-acylhexosamine oxidase activity","secondary_identifiers":["MetaCyc:N-ACYLHEXOSAMINE-OXIDASE-RXN","KEGG_REACTION:R01203"],"synonyms":[{"name":"N-acyl-D-hexosamine oxidase activity","type":"related"},{"name":"N-acyl-D-hexosamine:oxygen 1-oxidoreductase activity","type":"related"},{"name":"N-acyl-beta-D-hexosamine:oxygen 1-oxidoreductase activity","type":"related"}],"termid":"GO:0050122"}


id: PBO:0054046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1387","termid":"PBO:0054046"}


id: PBO:0083610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame, unlikely to encode a protein; overlaps almost completely with YDL119C; mutations that would affect both YDL118W and YDL119C confer defective telomere maintenance and are synthetically sick or lethal with alpha-synuclein","termid":"PBO:0083610"}


id: PBO:0039405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase promoting complex subunit 7","termid":"PBO:0039405"}


id: FYPO:0006290
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during S phase of the mitotic cell cycle and during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during cellular response to hydroxyurea","termid":"FYPO:0002099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal protein phosphorylation during mitotic S phase during cellular response to hydroxyurea","synonyms":[{"name":"normal protein phosphorylation during S phase during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"normal protein phosphorylation during cellular response to hydroxyurea during S phase of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0006290"}


id: GO:1900422
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A positive regulation of transcription from RNA polymerase II promoter that results in positive regulation of cellular alcohol catabolic process.","definition_xrefs":["GOC:TermGenie","GOC:curators","PMID:3305157","PMID:8221926"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cellular alcohol catabolic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900422)","synonyms":[{"name":"activation of cellular alcohol catabolic process by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up regulation of cellular alcohol catabolic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of cellular alcohol catabolic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of cellular alcohol catabolic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900422"}


id: PBO:0078043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 33","termid":"PBO:0078043"}


id: GO:1904368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sclerenchyma cell differentiation.","definition_xrefs":["PMID:26025534","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"sclerenchyma cell differentiation","termid":"GO:0014001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sclerenchyma cell differentiation","termid":"GO:1904368"}


id: PBO:0044033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSPG4 pseudogene 2 Y-linked","termid":"PBO:0044033"}


id: GO:0047021
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + prostaglandin E(1) = 15-dehydro-prostaglandin E1 + H+ + NADPH.","definition_xrefs":["RHEA:11636","EC:1.1.1.197"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"15-hydroxyprostaglandin dehydrogenase (NADP+) activity","secondary_identifiers":["MetaCyc:1.1.1.197-RXN","KEGG_REACTION:R04552"],"synonyms":[{"name":"(13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate:NADP+ 15-oxidoreductase activity","type":"related"},{"name":"NADP-dependent 15-hydroxyprostaglandin dehydrogenase","type":"broad"},{"name":"NADP-linked 15-hydroxyprostaglandin dehydrogenase","type":"broad"},{"name":"NADP-specific 15-hydroxyprostaglandin dehydrogenase","type":"broad"},{"name":"type II 15-hydroxyprostaglandin dehydrogenase activity","type":"related"}],"termid":"GO:0047021"}


id: PBO:0045844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 34","termid":"PBO:0045844"}


id: PBO:0048016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRMPD3 antisense RNA 1","termid":"PBO:0048016"}


id: MONDO:1010087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dermatomyositis characterized by the presence of anti-TIF1 autoantibodies.","definition_xrefs":["PMID:31279808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatomyositis","termid":"MONDO:0016367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005336"],"is_obsolete":false,"name":"anti-TIF1 dermatomyositis","synonyms":[{"name":"anti-transcription intermediary factor 1 complex dermatomyositis","type":"exact"}],"termid":"MONDO:1010087","xrefs":{"Monarch":{"xref_id":"1010087"}}}


id: GO:0044601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a nucleotide from a protein amino acid.","definition_xrefs":["GOC:sp","PMID:21734656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein denucleotidylation","termid":"GO:0044601"}


id: PBO:0083685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enolase, a phosphopyruvate hydratase; catalyzes the conversion of 2-phosphoglycerate to phosphoenolpyruvate; complements the growth defect of an ENO1 ENO2 double mutant","termid":"PBO:0083685"}


id: GO:0034977
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the precursor form of NF-kappaB (p105), the NF-kappaB inhibitor ABIN-2, and the kinase TPL-2 (MAP3K8); the complex stabilizes TPL-2 and is involved in signaling in lipopolysaccharide (LPS)-stimulated macrophages.","definition_xrefs":["PMID:15169888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"serine/threonine protein kinase complex","termid":"GO:1902554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ABIN2-NFKB1-MAP3K8 complex","synonyms":[{"name":"ABIN2-NFKB1-TPL-1 complex","type":"exact"}],"termid":"GO:0034977"}


id: MONDO:0018260
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"scalp syndrome","secondary_identifiers":["MEDGEN:1665599","Orphanet:370052","UMLS:C4751599","GARD:21592"],"synonyms":[{"name":"sebaceous nevus-CNS malformations-aplasia cutis congenital-limbal dermoid-pigmented nevus syndrome","type":"exact"},{"name":"sebaceous nevus-central nervous system malformations-aplasia cutis congenital-limbal dermoid-pigmented nevus syndrome","type":"exact"}],"termid":"MONDO:0018260","xrefs":{"Monarch":{"xref_id":"0018260"}}}


id: MONDO:0015758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"T-cell non-Hodgkin lymphoma","termid":"MONDO:0015760"},{"relation_name":"is_a","term_name":"primary cutaneous lymphoma","termid":"MONDO:0018898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"primary cutaneous T-cell lymphoma","secondary_identifiers":["MedDRA:10011677","UMLS:C0079773","MESH:D016410","Orphanet:171901","GARD:6226","MEDGEN:36336"],"termid":"MONDO:0015758","xrefs":{"Monarch":{"xref_id":"0015758"}}}


id: PBO:0049584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 clustered histone 2","termid":"PBO:0049584"}


id: PBO:0071083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 85","termid":"PBO:0071083"}


id: GO:0071622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of granulocyte chemotaxis. Granulocyte chemotaxis is the movement of a granulocyte in response to an external stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte chemotaxis","termid":"GO:0002688"},{"relation_name":"regulates","term_name":"granulocyte chemotaxis","termid":"GO:0071621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of granulocyte chemotaxis","termid":"GO:0071622"}


id: PBO:0086779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum; YDR524C-B has a paralog, YCL048W-A, that arose from the whole genome duplication","termid":"PBO:0086779"}


id: PBO:0070899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 7","termid":"PBO:0070899"}


id: GO:0098009
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of the viral terminase complex that contains the translocase and endonuclease activities and allows the translocation of the phage DNA into the procapsid. The large subunit usually assembles as a heterooligomer with the small subunit.","definition_xrefs":["GOC:bm","GOC:ch","GOC:jh2","PMID:18687036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"viral terminase complex","termid":"GO:0043493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"viral terminase, large subunit","synonyms":[{"name":"virus terminase, large subunit","type":"exact"}],"termid":"GO:0098009"}


id: MONDO:0003877
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cervical adenoid basal carcinoma (obsolete MONDO:0003877)","termid":"MONDO:0003877","xrefs":{"Monarch":{"xref_id":"0003877"}}}


id: MONDO:0013409
data:
  {"annotated_genes":["SJAG_04114"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89163],"is_not":false,"summary":null,"term":"MONDO:0013409"}]},"cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing age related macular degeneration in which the cause of the disease is a mutation in the ERCC6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene","MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"age-related macular degeneration","termid":"MONDO:0005150"},{"relation_name":"is_a","term_name":"age related macular degeneration, susceptibility to","termid":"MONDO:0100174"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04114":null},"genotype_count":0,"is_obsolete":false,"name":"age related macular degeneration 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3151063","OMIM:613761","DOID:0110028","MEDGEN:462413"],"synonyms":[{"name":"ARMD5","type":"exact"},{"name":"ERCC6 age-related macular degeneration","type":"exact"},{"name":"age related macular degeneration type 5","type":"exact"},{"name":"age-related macular degeneration caused by mutation in ERCC6","type":"exact"},{"name":"macular Degeneration, age-related, type 5","type":"exact"},{"name":"macular degeneration, age-related, 5","type":"related"},{"name":"macular degeneration, age-related, susceptibility to, 5","type":"exact"}],"termid":"MONDO:0013409","terms_by_termid":{"MONDO:0013409":null},"xrefs":{"Monarch":{"xref_id":"0013409"}}}


id: PBO:0051636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner membrane mitochondrial protein pseudogene 1","termid":"PBO:0051636"}


id: GO:0052921
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: acetone cyanohydrin = hydrogen cyanide + acetone.","definition_xrefs":["MetaCyc:ACETONE-CYANHYDRIN-LYASE-RXN","KEGG_REACTION:R01553"],"gene_count":0,"genotype_count":0,"name":"obsolete acetone-cyanohydrin acetone-lyase (cyanide-forming) activity (obsolete GO:0052921)","termid":"GO:0052921"}


id: PBO:0047715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin containing dimethylaniline monoxygenase 6, pseudogene","termid":"PBO:0047715"}


id: GO:0097393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of telomeric repeat-containing RNA from a DNA template. A telomere is a complex of DNA and proteins that seals the end of a chromosome.","definition_xrefs":["PMID:22139915","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"telomeric repeat-containing RNA transcription","synonyms":[{"name":"TERRA transcription","type":"exact"}],"termid":"GO:0097393"}


id: PBO:0035825
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_ubiquitination_during_vegetative_growth","termid":"PBO:0035825"}


id: PBO:0069394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 654, pseudogene","termid":"PBO:0069394"}


id: GO:0018191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The octanoylation of peptidyl-serine to form peptidyl-O3-octanoyl-L-serine, typical of the protein ghrelin.","definition_xrefs":["PMID:10604470","RESID:AA0290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein octanoylation","termid":"GO:0018190"},{"relation_name":"is_a","term_name":"peptidyl-serine modification","termid":"GO:0018209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042158"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0042158","GO:0008150"],"is_obsolete":false,"name":"peptidyl-serine octanoylation","termid":"GO:0018191"}


id: PBO:0060393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle organizing protein 2A","termid":"PBO:0060393"}


id: MOD:01381
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-palmitoleyl-L-serine.","definition_xrefs":["RESID:AA0455","OMSSA:186","PubMed:17141155"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-palmitoleylated residue","termid":"MOD:01768"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"O-palmitoleyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-((9Z)-9-hexadecenoyloxy)propanoic acid","type":"exact"},{"name":"L-serine cis-9-hexadecenoate ester","type":"exact"},{"name":"LIPID O-palmitoleyl serine","type":"exact"},{"name":"O-palmitoleyl-L-serine","type":"exact"},{"name":"O3-palmitoleyl-serine","type":"exact"},{"name":"mod186","type":"exact"}],"termid":"MOD:01381"}


id: PBO:0031372
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitochondrial_nucleoid_decreased_number","termid":"PBO:0031372"}


id: PBO:0075440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPANX family member N5","termid":"PBO:0075440"}


id: PBO:0003110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Brx1 (predicted)","termid":"PBO:0003110"}


id: GO:0032254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a secretory granule to a specific location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of vesicle localization","termid":"GO:0051650"},{"relation_name":"part_of","term_name":"secretory granule localization","termid":"GO:0032252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of secretory granule localization","synonyms":[{"name":"establishment of secretory granule localisation","type":"exact"}],"termid":"GO:0032254"}


id: PR:Q9UT36
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- glo2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacylglutathione hydrolase C824.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC824.07","synonyms":[{"name":"Glx II (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-glo2","type":"exact"},{"name":"glyoxalase II (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT36"}


id: PBO:0051827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon regulatory factor 2 binding protein like","termid":"PBO:0051827"}


id: MONDO:0020558
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant Charcot-Marie-Tooth disease, type 2K (CMT2K) is an axonal CMT peripheral sensorimotor polyneuropathy.","definition_xrefs":["Orphanet:99944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"autosomal dominant Charcot-Marie-Tooth disease type 2K","secondary_identifiers":["GARD:9199","MEDGEN:334294","NCIT:C133886","SCTID:719512003","UMLS:C1842984"],"synonyms":[{"name":"CMT2K","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 2K","type":"exact"}],"termid":"MONDO:0020558","xrefs":{"Monarch":{"xref_id":"0020558"}}}


id: PBO:0066929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 231","termid":"PBO:0066929"}


id: PBO:0040983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biorientation of chromosomes in cell division 1 pseudogene 1","termid":"PBO:0040983"}


id: GO:0008024
data:
  {"annotated_genes":["SJAG_01213","SJAG_01149","SJAG_03967","SJAG_02057","SJAG_03061"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[81223,97614,112761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070692"},{"annotations":[110873,110716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070691"}]},"cv_name":"cellular_component","definition":"A transcription elongation factor complex that facilitates the transition from abortive to productive elongation by phosphorylating the CTD domain of the large subunit of DNA-directed RNA polymerase II, holoenzyme. Contains a cyclin and a cyclin-dependent protein kinase catalytic subunit.","definition_xrefs":["PMID:19328067","GOC:bhm","GOC:vw","PMID:10766736","PMID:16721054","PMID:17079683","PMID:7759473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription elongation factor complex","termid":"GO:0008023"},{"relation_name":"is_a","term_name":"nuclear cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0019908"},{"relation_name":"is_a","term_name":"carboxy-terminal domain protein kinase complex","termid":"GO:0032806"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01149":null,"SJAG_01213":null,"SJAG_02057":null,"SJAG_03061":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634","GO:0005654"],"is_obsolete":false,"name":"cyclin/CDK positive transcription elongation factor complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"positive transcription elongation factor complex b","type":"related"}],"termid":"GO:0008024","terms_by_termid":{"GO:0070691":null,"GO:0070692":null}}


id: MONDO:0000333
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital syphilis that is manifested between 0 and 2 years old.","definition_xrefs":["Wikipedia:Congenital_syphilis#Early"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital syphilis","termid":"MONDO:0005714"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early congenital syphilis","secondary_identifiers":["icd11.foundation:108348777","DOID:0050488","SCTID:4359001","ICD9:090.2","MEDGEN:546894","UMLS:C0275859"],"synonyms":[{"name":"Early congenital syphilis (less than 2 years)","type":"broad"}],"termid":"MONDO:0000333","xrefs":{"Monarch":{"xref_id":"0000333"}}}


id: PBO:0017771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nramp family manganese ion transmembrane transporter","termid":"PBO:0017771"}


id: PBO:0028060
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_DNA_replication_during_vegetative_growth","termid":"PBO:0028060"}


id: SO:0001142
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The peptide twists in an anticlockwise, left handed manner. The dihedral angles for this turn are: Residue(i): -140 degrees < chi(1) -120 degrees < -20 degrees, -90 degrees psi +120 degrees < +40 degrees, residue(i+1): -140 degrees < phi < -20 degrees, -90 < psi < +40 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine_threonine_turn","termid":"SO:0001141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"st_turn_left_handed_type_one","secondary_identifiers":["BS:00234"],"synonyms":[{"name":"st turn left handed type one","type":"exact"},{"name":"st_turn_il","type":"exact"}],"termid":"SO:0001142"}


id: GO:0051515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of monopolar cell growth, polarized growth from one end of a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of unidimensional cell growth","termid":"GO:0051512"},{"relation_name":"is_a","term_name":"regulation of monopolar cell growth","termid":"GO:0051513"},{"relation_name":"positively_regulates","term_name":"monopolar cell growth","termid":"GO:0042814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of monopolar cell growth","synonyms":[{"name":"stimulation of monopolar cell growth","type":"narrow"},{"name":"up regulation of monopolar cell growth","type":"exact"},{"name":"up-regulation of monopolar cell growth","type":"exact"},{"name":"upregulation of monopolar cell growth","type":"exact"}],"termid":"GO:0051515"}


id: PR:O74385
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- elp6 gene.","definition_xrefs":["UniProtKB:O74385","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex protein 6 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.10","synonyms":[{"name":"Spom972h-elp6","type":"exact"}],"termid":"PR:O74385"}


id: GO:0004451
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: isocitrate = glyoxylate + succinate.","definition_xrefs":["EC:4.1.3.1","RHEA:13245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"isocitrate lyase activity","secondary_identifiers":["KEGG_REACTION:R00479","MetaCyc:ISOCIT-CLEAV-RXN"],"synonyms":[{"name":"ICL activity","type":"related"},{"name":"isocitrase activity","type":"related"},{"name":"isocitratase activity","type":"related"},{"name":"isocitrate glyoxylate-lyase (succinate-forming)","type":"related"},{"name":"isocitrate glyoxylate-lyase activity","type":"related"},{"name":"isocitritase activity","type":"related"},{"name":"threo-DS-isocitrate glyoxylate-lyase activity","type":"related"}],"termid":"GO:0004451"}


id: MOD:01875
data:
  {"annotated_genes":["SJAG_03641","SJAG_00464"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[82466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00126"},{"annotations":[82499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00127"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N6-amino hydrogen atom of L-lysine with an acyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acylated residue","termid":"MOD:00670"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00464":null,"SJAG_03641":null},"genotype_count":0,"is_obsolete":false,"name":"N6-acylated L-lysine","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"N6AcylLys","type":"exact"}],"termid":"MOD:01875","terms_by_termid":{"MOD:00126":null,"MOD:00127":null}}


id: PBO:0045940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ephrin A5","termid":"PBO:0045940"}


id: GO:1990650
data:
  {"annotated_genes":["SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110140],"is_not":false,"summary":null,"term":"GO:1990650"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 2,4,5,6-tetrakisphosphate + H2O = 1D-myo-inositol 2,4,6-trisphosphate + phosphate.","definition_xrefs":["PMID:15316017","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate phosphatase activity","termid":"GO:0052743"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"inositol-2,4,5,6-tetrakisphosphate 5-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990650","terms_by_termid":{"GO:1990650":null}}


id: PBO:0075934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST20 antisense RNA 1","termid":"PBO:0075934"}


id: PR:000027733
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A myosin type-2 heavy chain 1 phosphorylated 1 in Schizosaccharomyces pombe. Example: UniProtKB:Q9USI6-1, Ser-1444, MOD:00046.","definition_xrefs":["PMID:15184401","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin type-2 heavy chain 1","termid":"PR:000027728"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin type-2 heavy chain 1 phosphorylated 1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPCC645.05c","synonyms":[{"name":"Spom-myo2/Phos:1","type":"exact"}],"termid":"PR:000027733"}


id: MONDO:0018304
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, underdiagnosed disorder in adults characterized by recurrent febrile rash, bone and/or joint pain, enlarged lymph nodes, fatigue, a monoclonal IgM component, leukocytosis and systemic inflammatory response.","definition_xrefs":["Orphanet:37748"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type IV hypersensitivity disease","termid":"MONDO:0002459"},{"relation_name":"excluded_subClassOf","term_name":"urticaria","termid":"MONDO:0005492"},{"relation_name":"excluded_subClassOf","term_name":"unexplained periodic fever syndrome","termid":"MONDO:0015158"},{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schnitzler syndrome","secondary_identifiers":["MESH:D019873","NORD:1696","GARD:12390","DOID:4371","icd11.foundation:1867840545","MedDRA:10062908","MEDGEN:141892","SCTID:402415001","EFO:1001165","UMLS:C0524988","ICD9:708.8"],"synonyms":[{"name":"chronic urticaria with gammapathy","type":"related"},{"name":"chronic urticaria with gammopathy","type":"exact"},{"name":"chronic urticaria with macroglobulinemia","type":"exact"}],"termid":"MONDO:0018304","xrefs":{"Monarch":{"xref_id":"0018304"}}}


id: GO:1901811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of beta-carotene.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00802","GOC:yaf","MetaCyc:PWY-5943","PMID:11387982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid catabolic process","termid":"GO:0016118"},{"relation_name":"is_a","term_name":"carotene catabolic process","termid":"GO:0016121"},{"relation_name":"is_a","term_name":"beta-carotene metabolic process","termid":"GO:1901810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"beta-carotene catabolic process","synonyms":[{"name":"beta-carotene breakdown","type":"exact"},{"name":"beta-carotene catabolism","type":"exact"},{"name":"beta-carotene degradation","type":"exact"}],"termid":"GO:1901811"}


id: PBO:0050339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 41","termid":"PBO:0050339"}


id: PBO:0003694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mdm10/Mdm12/Mmm1 complex subunit Mdm12","termid":"PBO:0003694"}


id: FYPO:0009026
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing methionine as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002057","FYPO:0001985","FYPO:0002058","FYPO:0005447"],"is_obsolete":false,"name":"increased cell population growth on methionine nitrogen source","synonyms":[{"name":"increased growth on methionine nitrogen source","type":"broad"},{"name":"increased vegetative cell growth on methionine nitrogen source","type":"exact"}],"termid":"FYPO:0009026"}


id: GO:0032801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule catabolic process","termid":"GO:0009057"},{"relation_name":"is_a","term_name":"receptor metabolic process","termid":"GO:0043112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"receptor catabolic process","synonyms":[{"name":"receptor breakdown","type":"exact"},{"name":"receptor catabolism","type":"exact"},{"name":"receptor degradation","type":"exact"}],"termid":"GO:0032801"}


id: GO:0102007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + an N-acyl-L-homoserine lactone = H+ + an N-acyl-L-homoserine.","definition_xrefs":["EC:3.1.1.81"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactonohydrolase activity","termid":"GO:0046573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"acyl-L-homoserine-lactone lactonohydrolase activity","secondary_identifiers":["Reactome:R-HSA-9756177","Reactome:R-HSA-9756136","RHEA:22576","Reactome:R-HSA-9756150","MetaCyc:3.1.1.81-RXN","Reactome:R-HSA-8932633"],"termid":"GO:0102007"}


id: GO:0042179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotine, (S)(-)-3-(1-methyl-2-pyrrolidinyl)pyridine.","definition_xrefs":["ISBN:0198547684","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"nicotine metabolic process","termid":"GO:0018933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nicotine biosynthetic process","synonyms":[{"name":"nicotine anabolism","type":"exact"},{"name":"nicotine biosynthesis","type":"exact"},{"name":"nicotine formation","type":"exact"},{"name":"nicotine synthesis","type":"exact"}],"termid":"GO:0042179"}


id: PBO:0053261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIF antisense RNA 2","termid":"PBO:0053261"}


id: MONDO:0000928
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma that arises from the upper or lower eyelid.","definition_xrefs":["NCIT:C4358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous melanoma","termid":"MONDO:0005012"},{"relation_name":"is_a","term_name":"ocular melanoma","termid":"MONDO:0006325"},{"relation_name":"is_a","term_name":"eyelid cancer","termid":"MONDO:0021313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"eyelid melanoma","secondary_identifiers":["UMLS:C0339116","DOID:10040","ICD9:172.1","MEDGEN:90937","SCTID:231834005"],"synonyms":[{"name":"eyelid melanoma","type":"exact"},{"name":"eyelid melanoma (disease)","type":"exact"},{"name":"malignant eyelid melanoma","type":"exact"},{"name":"malignant melanoma of eyelid","type":"exact"},{"name":"malignant melanoma of the eyelid","type":"exact"},{"name":"melanoma (disease) of eyelid","type":"exact"},{"name":"melanoma of eyelid","type":"exact"},{"name":"melanoma of the eyelid","type":"exact"}],"termid":"MONDO:0000928","xrefs":{"Monarch":{"xref_id":"0000928"}}}


id: GO:2000002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a DNA damage checkpoint.","definition_xrefs":["GOC:obol","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle checkpoint","termid":"GO:1901977"},{"relation_name":"is_a","term_name":"regulation of DNA damage checkpoint","termid":"GO:2000001"},{"relation_name":"negatively_regulates","term_name":"DNA damage checkpoint signaling","termid":"GO:0000077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0007049"],"is_obsolete":false,"name":"negative regulation of DNA damage checkpoint","synonyms":[{"name":"negative regulation of DNA damage response, signal transduction resulting in cell cycle arrest","type":"related"}],"termid":"GO:2000002"}


id: GO:2000208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ribosomal small subunit export from nucleus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ribosomal subunit export from nucleus","termid":"GO:2000202"},{"relation_name":"is_a","term_name":"regulation of ribosomal small subunit export from nucleus","termid":"GO:2000206"},{"relation_name":"positively_regulates","term_name":"ribosomal small subunit export from nucleus","termid":"GO:0000056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0006913"],"is_obsolete":false,"name":"positive regulation of ribosomal small subunit export from nucleus","synonyms":[{"name":"positive regulation of 30S ribosomal subunit export from nucleus","type":"related"},{"name":"positive regulation of 40S ribosomal subunit export from nucleus","type":"related"},{"name":"positive regulation of ribosomal small subunit export from cell nucleus","type":"exact"},{"name":"positive regulation of ribosomal small subunit export out of nucleus","type":"exact"},{"name":"positive regulation of ribosomal small subunit transport from nucleus to cytoplasm","type":"exact"},{"name":"positive regulation of ribosomal small subunit-nucleus export","type":"exact"}],"termid":"GO:2000208"}


id: PR:Q9Y7J0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1778.03c gene.","definition_xrefs":["UniProtKB:Q9Y7J0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH pyrophosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1778.03c","synonyms":[{"name":"Spom972h-SPBC1778.03c","type":"exact"}],"termid":"PR:Q9Y7J0"}


id: GO:0140942
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl9-[histone H3] + 2 S-adenosyl-L-methionine = 2 H+ + N6,N6-dimethyl-L-lysyl9-[histone H3] + 2 S-adenosyl-L-homocysteine. This reaction is the successive addition of two methyl groups to the unmethylated lysine residue at position 9 of histone H3, producing histone H3K9me2.","definition_xrefs":["RHEA:64444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K9 methyltransferase activity","termid":"GO:0046974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0008276","GO:0003824","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"histone H3K9 dimethyltransferase activity","secondary_identifiers":["EC:2.1.1.368"],"synonyms":[{"name":"histone H3-K9 dimethylation","type":"broad"},{"name":"histone H3K9 dimethylase activity","type":"exact"},{"name":"histone H3K9 dimethylation","type":"broad"},{"name":"histone H3K9 mono/dimethylase activity","type":"exact"},{"name":"histone lysine N-dimethyltransferase activity (H3-K9 specific)","type":"exact"}],"termid":"GO:0140942"}


id: PBO:0041156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 pseudogene 11","termid":"PBO:0041156"}


id: PBO:0053301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lin-7 homolog C, crumbs cell polarity complex component","termid":"PBO:0053301"}


id: MONDO:0014513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nemaline myopathy in which the cause of the disease is a mutation in the LMOD3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"severe congenital nemaline myopathy","termid":"MONDO:0015735"},{"relation_name":"is_a","term_name":"typical nemaline myopathy","termid":"MONDO:0015737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"nemaline myopathy 10","secondary_identifiers":["GARD:16066","MEDGEN:863797","OMIM:616165","UMLS:C4015360","DOID:0110931"],"synonyms":[{"name":"LMOD3 nemaline myopathy","type":"exact"},{"name":"NEM10","type":"exact"},{"name":"nemaline myopathy 10","type":"exact"},{"name":"nemaline myopathy caused by mutation in LMOD3","type":"exact"},{"name":"nemaline myopathy type 10","type":"exact"}],"termid":"MONDO:0014513","xrefs":{"Monarch":{"xref_id":"0014513"}}}


id: SO:0001711
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 79th residue (a lysine), from the start of the H3 histone protein is di-methylated.","direct_ancestors":[{"relation_name":"is_a","term_name":"H3K79_methylation_site","termid":"SO:0001735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K79_dimethylation_site","synonyms":[{"name":"H3K79 di-methylation site","type":"exact"},{"name":"H3K79Me2","type":"related"}],"termid":"SO:0001711"}


id: MONDO:0850150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A kidney disease that is located in the kidney cortex.","definition_xrefs":["DOID:0080616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"kidney cortex disease","termid":"MONDO:0850150","xrefs":{"Monarch":{"xref_id":"0850150"}}}


id: GO:0044840
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A lysosome-related organelle contained within the intestinal cells of the nematode C. elegans. Gut granules are acidified, birefringent, autofluorescent, and contain the vacuolar H+-ATPase. They also serve as sites of cellular zinc storage.","definition_xrefs":["PMID:24204312","GOC:kmv","PMID:22916203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"gut granule","termid":"GO:0044840"}


id: GO:0034752
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An aryl hydrocarbon receptor complex found in the cytosol, in which the ligand-binding subunit AhR is not bound to ligand; consists of AhR, two molecules of HSP90, the protein kinase c-Src, and the immunophilin XAP2/AIP.","definition_xrefs":["PMID:8937476","PMID:7598497","PMID:9447995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aryl hydrocarbon receptor complex","termid":"GO:0034751"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005829","GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cytosolic aryl hydrocarbon receptor complex","synonyms":[{"name":"9S-cytosolic aryl hydrocarbon (Ah) receptor non-ligand activated complex","type":"related"},{"name":"cytosolic AHRC","type":"exact"},{"name":"cytosolic AhR complex","type":"exact"}],"termid":"GO:0034752"}


id: MONDO:0010947
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Budd-Chiari syndrome (BCS) is caused by obstruction of hepatic venous outflow involving either the hepatic veins or the terminal segment of the inferior vena cava.","definition_xrefs":["Orphanet:131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatic vascular disorder","termid":"MONDO:0002405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"Budd-Chiari syndrome","secondary_identifiers":["GARD:5968","MedDRA:10006537","MEDGEN:163632","MESH:D006502","UMLS:C0856761","SCTID:82385007","ICD9:453.0","ICD10CM:I82.0","NANDO:1200437","icd11.foundation:1300118676","OMIM:600880"],"synonyms":[{"name":"BDCHS","type":"related"},{"name":"Budd-Chiari syndrome","type":"exact"},{"name":"Budd-Chiari syndrome, somatic","type":"exact"},{"name":"membranous obstruction of Inferior vena cava","type":"related"},{"name":"membranous obstruction of the inferior vena cava","type":"related"}],"termid":"MONDO:0010947","xrefs":{"Monarch":{"xref_id":"0010947"}}}


id: PBO:0047283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FA complementation group G","termid":"PBO:0047283"}


id: PBO:0078463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-His (anticodon GTG) 1-1","termid":"PBO:0078463"}


id: PBO:0087250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine-threonine protein kinase; component of a glucose-sensing system that inhibits growth in response to glucose availability; upon nutrient deprivation Yak1p phosphorylates Pop2p to regulate mRNA deadenylation, the co-repressor Crf1p to inhibit transcription of ribosomal genes, and the stress-responsive transcription factors Hsf1p and Msn2p; nuclear localization negatively regulated by the Ras/PKA signaling pathway in the presence of glucose","termid":"PBO:0087250"}


id: GO:0006802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The processes involved in the induction or activation of catalase, an enzyme that catalyzes the conversion of H2O2 into H2O.","definition_xrefs":["GOC:jl","PMID:11245904"],"gene_count":0,"genotype_count":0,"name":"obsolete catalase reaction (obsolete GO:0006802)","synonyms":[{"name":"catalase reaction","type":"exact"},{"name":"hydroperoxidase reaction","type":"related"}],"termid":"GO:0006802"}


id: PBO:0056686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple EGF like domains 6","termid":"PBO:0056686"}


id: PBO:0089266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial MutS protein Msh1","termid":"PBO:0089266"}


id: PBO:0051366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3-34 (pseudogene)","termid":"PBO:0051366"}


id: GO:0016555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The conversion of a uridine residue to cytosine in an RNA molecule by amination.","definition_xrefs":["PMID:11092837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base conversion or substitution editing","termid":"GO:0016553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"uridine to cytidine editing","termid":"GO:0016555"}


id: PBO:0116223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucan synthesis regulator, Gsr1","termid":"PBO:0116223"}


id: PBO:0004803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress responsive orphan 1","termid":"PBO:0004803"}


id: GO:1903430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell maturation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:17459944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"regulation of cell maturation","termid":"GO:1903429"},{"relation_name":"negatively_regulates","term_name":"cell maturation","termid":"GO:0048469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell maturation","synonyms":[{"name":"down regulation of cell maturation","type":"exact"},{"name":"down regulation of functional differentiation","type":"related"},{"name":"down-regulation of cell maturation","type":"exact"},{"name":"down-regulation of functional differentiation","type":"related"},{"name":"downregulation of cell maturation","type":"exact"},{"name":"downregulation of functional differentiation","type":"related"},{"name":"inhibition of cell maturation","type":"narrow"},{"name":"inhibition of functional differentiation","type":"related"},{"name":"negative regulation of functional differentiation","type":"related"}],"termid":"GO:1903430"}


id: FYPO:0003953
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which triglyceride biosynthesis is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal triglyceride biosynthetic process","synonyms":[{"name":"abnormal TAG biosynthetic process","type":"exact"},{"name":"abnormal triacylglycerol biosynthesis","type":"exact"},{"name":"abnormal triacylglycerol biosynthetic process","type":"exact"},{"name":"abnormal triglyceride biosynthesis","type":"exact"},{"name":"abnormal triglyceride biosynthetic process during mitotic cell cycle","type":"related"},{"name":"abnormal triglyceride biosynthetic process during vegetative growth","type":"exact"}],"termid":"FYPO:0003953"}


id: PBO:0091307
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human Rab6","termid":"PBO:0091307"}


id: GO:1990834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an odorant stimulus. An odorant is any substance capable of stimulating the sense of smell.","definition_xrefs":["PMID:11268007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to odorant","termid":"GO:1990834"}


id: GO:0042985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of amyloid precursor protein (APP), the precursor of amyloid-beta.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glycoprotein biosynthetic process","termid":"GO:0010561"},{"relation_name":"is_a","term_name":"regulation of amyloid precursor protein biosynthetic process","termid":"GO:0042984"},{"relation_name":"negatively_regulates","term_name":"amyloid precursor protein biosynthetic process","termid":"GO:0042983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of amyloid precursor protein biosynthetic process","synonyms":[{"name":"down regulation of amyloid precursor protein biosynthetic process","type":"exact"},{"name":"down-regulation of amyloid precursor protein biosynthetic process","type":"exact"},{"name":"downregulation of amyloid precursor protein biosynthetic process","type":"exact"},{"name":"inhibition of amyloid precursor protein biosynthetic process","type":"narrow"},{"name":"negative regulation of APP biosynthesis","type":"exact"},{"name":"negative regulation of APP biosynthetic process","type":"exact"},{"name":"negative regulation of amyloid precursor protein anabolism","type":"exact"},{"name":"negative regulation of amyloid precursor protein biosynthesis","type":"exact"},{"name":"negative regulation of amyloid precursor protein formation","type":"exact"},{"name":"negative regulation of amyloid precursor protein synthesis","type":"exact"}],"termid":"GO:0042985"}


id: MONDO:0015249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital heart defect characterized by the complete atresia of the mitral valve.","definition_xrefs":["NCIT:C98992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitral valve disorder","termid":"MONDO:0003767"},{"relation_name":"is_a","term_name":"congenital heart disease","termid":"MONDO:0005453"},{"relation_name":"is_a","term_name":"congenital mitral valve insufficiency and/or stenosis","termid":"MONDO:0019817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"mitral atresia disorder","secondary_identifiers":["Orphanet:1205","ICD10CM:Q23.2","GARD:3685","HP:0011560","MEDGEN:91035","UMLS:C0344760","icd11.foundation:6462604","SCTID:23063005"],"synonyms":[{"name":"congenital atresia of mitral valve","type":"exact"},{"name":"congenital mitral valve atresia","type":"exact"},{"name":"mitral atresia","type":"exact"},{"name":"mitral valve atresia","type":"exact"}],"termid":"MONDO:0015249","xrefs":{"Monarch":{"xref_id":"0015249"}}}


id: PBO:0001650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubp4 interactor Sfp47","termid":"PBO:0001650"}


id: PBO:0113249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Oligomeric mitochondrial matrix chaperone; cooperates with Ssc1p in mitochondrial thermotolerance after heat shock; prevents the aggregation of misfolded proteins as well as resolubilize protein aggregates; involved in response to ethanol stress","termid":"PBO:0113249"}


id: GO:0010910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate, frequency or extent of heparan sulfate proteoglycan biosynthesis by an increase in epimerase activity. This epimerase activity catalyzes the reaction that converts D-glucuronate into its diastereoisomer in heparan sulfate.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of heparan sulfate proteoglycan biosynthesis by positive regulation of epimerase activity (obsolete GO:0010910)","termid":"GO:0010910"}


id: MONDO:0100007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chronic inflammatory demyelinating polyneuropathy (obsolete MONDO:0100007)","termid":"MONDO:0100007","xrefs":{"Monarch":{"xref_id":"0100007"}}}


id: PBO:0078387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 1-2","termid":"PBO:0078387"}


id: GO:1904234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of aconitate hydratase activity.","definition_xrefs":["GOC:rl","GOC:BHF","PMID:18160053","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of aconitate hydratase activity (obsolete GO:1904234)","synonyms":[{"name":"activation of aconitase activity","type":"narrow"},{"name":"activation of aconitate hydratase activity","type":"narrow"},{"name":"activation of cis-aconitase activity","type":"narrow"},{"name":"activation of citrate(isocitrate) hydro-lyase (cis-aconitate-forming)","type":"narrow"},{"name":"activation of citrate(isocitrate) hydro-lyase activity","type":"narrow"},{"name":"positive regulation of aconitase activity","type":"exact"},{"name":"positive regulation of cis-aconitase activity","type":"exact"},{"name":"positive regulation of citrate(isocitrate) hydro-lyase (cis-aconitate-forming)","type":"exact"},{"name":"positive regulation of citrate(isocitrate) hydro-lyase activity","type":"exact"},{"name":"up regulation of aconitase activity","type":"exact"},{"name":"up regulation of aconitate hydratase activity","type":"exact"},{"name":"up regulation of cis-aconitase activity","type":"exact"},{"name":"up regulation of citrate(isocitrate) hydro-lyase (cis-aconitate-forming)","type":"exact"},{"name":"up regulation of citrate(isocitrate) hydro-lyase activity","type":"exact"},{"name":"up-regulation of aconitase activity","type":"exact"},{"name":"up-regulation of aconitate hydratase activity","type":"exact"},{"name":"up-regulation of cis-aconitase activity","type":"exact"},{"name":"up-regulation of citrate(isocitrate) hydro-lyase (cis-aconitate-forming)","type":"exact"},{"name":"up-regulation of citrate(isocitrate) hydro-lyase activity","type":"exact"},{"name":"upregulation of aconitase activity","type":"exact"},{"name":"upregulation of aconitate hydratase activity","type":"exact"},{"name":"upregulation of cis-aconitase activity","type":"exact"},{"name":"upregulation of citrate(isocitrate) hydro-lyase (cis-aconitate-forming)","type":"exact"},{"name":"upregulation of citrate(isocitrate) hydro-lyase activity","type":"exact"}],"termid":"GO:1904234"}


id: FYPO:0005906
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cgontractile ring contraction begins at the normal (i.e. indistinguishable from wild type) time relative to other cell cycle events.","definition_xrefs":["PomBase:mah","PMID:19570908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actin cytoskeleton organization","termid":"FYPO:0001366"},{"relation_name":"is_a","term_name":"normal actomyosin contractile ring contraction","termid":"FYPO:0004097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal onset of actomyosin contractile ring contraction","synonyms":[{"name":"normal dwell time before actomyosin contractile ring contraction","type":"exact"},{"name":"normal onset of actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"normal onset of actomyosin contractile ring contraction during vegetative growth","type":"exact"},{"name":"normal onset of contractile ring contraction","type":"exact"},{"name":"normal onset of cytokinetic contractile ring contraction","type":"exact"},{"name":"normal onset of cytokinetic ring contraction","type":"related"},{"name":"normal onset of mitotic contractile ring contraction","type":"exact"},{"name":"normal timing of actomyosin contractile ring contraction","type":"related"}],"termid":"FYPO:0005906"}


id: PBO:0046128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4 gamma 2","termid":"PBO:0046128"}


id: PBO:0045315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA nucleotidylexotransferase","termid":"PBO:0045315"}


id: MONDO:0013072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant Emery-Dreifuss muscular dystrophy in which the cause of the disease is a mutation in the SYNE2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant Emery-Dreifuss muscular dystrophy","termid":"MONDO:0020336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005267","MONDO:0000426"],"is_obsolete":false,"name":"Emery-Dreifuss muscular dystrophy 5, autosomal dominant","secondary_identifiers":["UMLS:C2751805","DOID:0070250","GARD:18207","MEDGEN:414111","OMIM:612999"],"synonyms":[{"name":"EDMD5","type":"related"},{"name":"EMERY-Dreifuss muscular dystrophy 5, autosomal dominant","type":"related"},{"name":"Emery-Dreifuss muscular dystrophy 5, autosomal dominant","type":"exact"},{"name":"SYNE2 autosomal dominant Emery-Dreifuss muscular dystrophy","type":"exact"},{"name":"autosomal dominant Emery-Dreifuss muscular dystrophy caused by mutation in SYNE2","type":"exact"}],"termid":"MONDO:0013072","xrefs":{"Monarch":{"xref_id":"0013072"}}}


id: GO:0090555
data:
  {"annotated_genes":["SJAG_01731","SJAG_05209","SJAG_02897"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96244,99746,101292],"is_not":false,"summary":null,"term":"GO:0090555"}]},"cv_name":"molecular_function","definition":"Catalysis of the movement of phosphatidylethanolamine from the exoplasmic to the cytosolic leaflet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["GOC:ab","PMID:16452632","PMID:20043909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid flippase activity","termid":"GO:0140333"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01731":null,"SJAG_02897":null,"SJAG_05209":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0140303","GO:0003674"],"is_obsolete":false,"name":"phosphatidylethanolamine flippase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATP-dependent phosphatidylethanolamine transporter activity","type":"related"},{"name":"ATPase-coupled phosphatidylethanolamine transporter activity","type":"broad"},{"name":"phosphatidylethanolamine flippase activity (exoplasmic to cytosolic leaflet)","type":"exact"},{"name":"phosphatidylethanolamine-translocating ATPase activity","type":"related"}],"termid":"GO:0090555","terms_by_termid":{"GO:0090555":null}}


id: GO:0001838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenesis of an embryonic epithelium into a tube-shaped structure.","definition_xrefs":["ISBN:0824072820","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial tube formation","termid":"GO:0072175"},{"relation_name":"part_of","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic epithelial tube formation","termid":"GO:0001838"}


id: GO:2000590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of metanephric mesenchymal cell migration.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"negative regulation of metanephros development","termid":"GO:0072217"},{"relation_name":"is_a","term_name":"regulation of metanephric mesenchymal cell migration","termid":"GO:2000589"},{"relation_name":"negatively_regulates","term_name":"metanephric mesenchymal cell migration","termid":"GO:0035789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of metanephric mesenchymal cell migration","synonyms":[{"name":"negative regulation of metanephric mesenchyme chemotaxis","type":"related"}],"termid":"GO:2000590"}


id: PBO:0046544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group FRD member 1, envelope","termid":"PBO:0046544"}


id: MONDO:0002232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the nasal cavity.","direct_ancestors":[{"relation_name":"is_a","term_name":"nasal disorder","termid":"MONDO:0002436"},{"relation_name":"is_a","term_name":"upper respiratory tract disorder","termid":"MONDO:0004867"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasal cavity disorder","secondary_identifiers":["DOID:2163","MEDGEN:137929","UMLS:C0339820","SCTID:232340005","NCIT:C27102"],"synonyms":[{"name":"disease of nasal cavity","type":"exact"},{"name":"disease or disorder of nasal cavity","type":"exact"},{"name":"disorder of nasal cavity","type":"exact"},{"name":"nasal cavity disease","type":"exact"},{"name":"nasal cavity disease or disorder","type":"exact"},{"name":"nasal cavity disorder","type":"exact"}],"termid":"MONDO:0002232","xrefs":{"Monarch":{"xref_id":"0002232"}}}


id: PBO:0113489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional regulator of a variety of genes; critical sensor of genotoxic stress; phosphorylation by protein kinase A stimulates Opi1p function in negative regulation of phospholipid biosynthetic genes; involved in telomere maintenance; null exhibits disrupted mitochondrial metabolism and low cardiolipin content, strongly correlated with overproduction of inositol; binds to phosphatidic acid","termid":"PBO:0113489"}


id: PBO:0017063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug46","termid":"PBO:0017063"}


id: GO:0052333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of the cell wall of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by organism of cell wall of other organism involved in symbiotic interaction (obsolete GO:0052333)","synonyms":[{"name":"metabolism by organism of cell wall of other organism","type":"related"},{"name":"modification by organism of cell wall of other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052333"}


id: FYPO:0000472
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mating type switching is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal mating type switching","synonyms":[{"name":"mating type switching: normal","type":"related"},{"name":"normal mating type switching during mitotic cell cycle","type":"related"},{"name":"normal mating type switching during vegetative growth","type":"exact"}],"termid":"FYPO:0000472"}


id: MONDO:0009711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic disorder caused by mutations in the TPM3, ACTA1, RYR1 or SEPN1 genes. It is inherited in an autosomal dominant or recessive pattern and rarely in an X-linked pattern. It manifests with myopathy throughout the body, particularly in the muscles of the shoulders, upper arms, hips, and thighs. Affected individuals may have contractures, lordosis, or scoliosis. In a minority of cases mild to severe breathing problems may occur.","definition_xrefs":["NCIT:C120046","PMID:31578728"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"qualitative or quantitative defects of alpha-actin","termid":"MONDO:0016193"},{"relation_name":"excluded_subClassOf","term_name":"qualitative or quantitative defects of selenoprotein N1","termid":"MONDO:0016197"},{"relation_name":"excluded_subClassOf","term_name":"qualitative or quantitative defects of tropomyosin","termid":"MONDO:0017303"},{"relation_name":"excluded_subClassOf","term_name":"alpha-actinopathy","termid":"MONDO:0100084"},{"relation_name":"excluded_subClassOf","term_name":"TPM3-related myopathy","termid":"MONDO:0100108"},{"relation_name":"excluded_subClassOf","term_name":"RYR1-related myopathy","termid":"MONDO:0100150"},{"relation_name":"excluded_subClassOf","term_name":"TPM2-related myopathy","termid":"MONDO:0100196"},{"relation_name":"is_a","term_name":"congenital structural myopathy","termid":"MONDO:0002921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"congenital fiber-type disproportion myopathy","secondary_identifiers":["GARD:6161","MEDGEN:108177","DOID:0080102","NANDO:2200868","Orphanet:2020","UMLS:C0546264","NANDO:1200483"],"synonyms":[{"name":"CFTDM","type":"exact"},{"name":"congenital fiber type disproportion","type":"related"},{"name":"congenital fiber-type disproportion","type":"exact"},{"name":"congenital fibre type disproportion","type":"related"},{"name":"congenital myopathy with fiber type disproportion","type":"exact"},{"name":"congenital myopathy with fibre type disproportion","type":"exact"},{"name":"myopathy, congenital with fiber-type disproportion","type":"related"}],"termid":"MONDO:0009711","xrefs":{"Monarch":{"xref_id":"0009711"}}}


id: GO:0044051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance released via cytolysis of symbiont cells. Cytolysis is the rupture of cell membranes and the loss of cytoplasm. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via substance released by symbiont cytolysis (obsolete GO:0044051)","synonyms":[{"name":"interaction with host via substance released by cytolysis of symbiont","type":"exact"}],"termid":"GO:0044051"}


id: MONDO:1011720
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subclinical hypocalcemia, non-human animal","secondary_identifiers":["OMIA:002048"],"termid":"MONDO:1011720","xrefs":{"Monarch":{"xref_id":"1011720"}}}


id: FYPO:0007637
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which chromatin moves within the nucleus to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:33434270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000641","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased chromatin mobility","synonyms":[{"name":"decreased chromatin mobility during mitotic cell cycle","type":"related"},{"name":"decreased chromatin mobility during vegetative growth","type":"exact"},{"name":"decreased chromatin motility","type":"exact"},{"name":"decreased chromatin movement","type":"exact"},{"name":"reduced chromatin mobility","type":"exact"}],"termid":"FYPO:0007637"}


id: PBO:0026789
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_heterothallic_h-_cells","termid":"PBO:0026789"}


id: PBO:0061131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMD3 ribosome export adaptor pseudogene 1","termid":"PBO:0061131"}


id: MONDO:0014036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An Alzheimer's disease that is characterized by an associated with mutations in the gene TREM2.","definition_xrefs":["DOID:0110049","PMID:23150934"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Alzheimer disease","termid":"MONDO:0004975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"Alzheimer disease 17","secondary_identifiers":["MEDGEN:767366","OMIM:615080","UMLS:C3554452"],"synonyms":[{"name":"AD17","type":"exact"},{"name":"Alzheimer disease 17","type":"exact"},{"name":"Alzheimer disease 17, late onset","type":"exact"},{"name":"Alzheimer disease 17, late-onset","type":"related"},{"name":"Alzheimer's disease 17","type":"exact"},{"name":"Alzheimer's disease type 17","type":"exact"}],"termid":"MONDO:0014036","xrefs":{"Monarch":{"xref_id":"0014036"}}}


id: FYPO:0004548
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is normal (i.e. indistinguishable from wild type) during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein kinase activity","termid":"FYPO:0003075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000654"],"is_obsolete":false,"name":"normal protein kinase activity during cellular response to hydroxyurea","synonyms":[{"name":"normal protein kinase activity during cellular response to HU","type":"exact"},{"name":"normal protein kinase activity in response to hydroxyurea","type":"related"}],"termid":"FYPO:0004548"}


id: FYPO:0000871
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000458"},{"relation_name":"is_a","term_name":"increased histone methylation during vegetative growth","termid":"FYPO:0000869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0001320","FYPO:0002274","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H3-K9 methylation during vegetative growth","synonyms":[{"name":"increased histone H3 K9 methylation during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 methylation during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9me during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000871"}


id: PBO:0058633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6765","termid":"PBO:0058633"}


id: PBO:0056559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minichromosome maintenance complex component 7","termid":"PBO:0056559"}


id: MONDO:0036217
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia, hypotonia, and respiratory insufficiency syndrome, neonatal lethal","termid":"MONDO:0032931"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal pontocerebellar hypoplasia-hypotonia-respiratory insufficiency syndrome due to a point mutation","secondary_identifiers":["GARD:18036","Orphanet:615983","MEDGEN:1842868","UMLS:C5681819"],"termid":"MONDO:0036217","xrefs":{"Monarch":{"xref_id":"0036217"}}}


id: PBO:0002483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF and RSC complex subunit Arp42","termid":"PBO:0002483"}


id: PATO:0000274
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A reproductive quality inhering in a bearer by virtue of the bearer's initiating, sustaining, or supporting reproduction.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive quality","termid":"PATO:0001434"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fertility","termid":"PATO:0000274"}


id: PBO:0052248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 17","termid":"PBO:0052248"}


id: PBO:0083607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a functional protein; overlaps 5' end of essential HSF1 gene encoding heat shock transcription factor","termid":"PBO:0083607"}


id: PBO:0112595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein, copper-binding, Cmc2","termid":"PBO:0112595"}


id: PBO:0077712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transition protein 2","termid":"PBO:0077712"}


id: PBO:0063419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE3A antisense RNA 1","termid":"PBO:0063419"}


id: PBO:0005080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic chromosome segregation protein (predicted)","termid":"PBO:0005080"}


id: PBO:0028085
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_positive_regulation_of_m7G(5')pppN_diphosphatase_activity","termid":"PBO:0028085"}


id: GO:0042722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of alpha-beta T cells resulting from exposure to a superantigen, a microbial antigen with an extremely potent activating effect on T cells that bear a specific variable region.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta T cell activation","termid":"GO:0046631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alpha-beta T cell activation by superantigen","synonyms":[{"name":"alpha-beta T lymphocyte activation by superantigen","type":"exact"},{"name":"alpha-beta T-cell activation by superantigen","type":"exact"},{"name":"alpha-beta T-lymphocyte activation by superantigen","type":"exact"}],"termid":"GO:0042722"}


id: FYPO:0003673
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of ATP binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal molecular function","termid":"FYPO:0000706"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal ATP binding","termid":"FYPO:0003673"}


id: PR:Q9USI4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A SAC3 domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAC3 family protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC70.06","secondary_identifiers":["UniProtKB:Q9USI4"],"synonyms":[{"name":"Spom972h-SAC3D1","type":"exact"}],"termid":"PR:Q9USI4"}


id: PBO:0086075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function with 8 putative transmembrane segments; ORF exhibits genomic organization compatible with a translational readthrough-dependent mode of expression","termid":"PBO:0086075"}


id: GO:1901869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ecgonine methyl ester.","definition_xrefs":["PMID:22665766","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropane alkaloid biosynthetic process","termid":"GO:0009710"},{"relation_name":"is_a","term_name":"ecgonine methyl ester metabolic process","termid":"GO:1901867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"ecgonine methyl ester biosynthetic process","synonyms":[{"name":"ecgonine methyl ester anabolism","type":"exact"},{"name":"ecgonine methyl ester biosynthesis","type":"exact"},{"name":"ecgonine methyl ester formation","type":"exact"},{"name":"ecgonine methyl ester synthesis","type":"exact"}],"termid":"GO:1901869"}


id: GO:0048794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the swim bladder over time, from its formation to the mature structure. The swim bladder is used by some fishes to maintain buoyancy and may function in addition as a sound producing organ, a sound receptor, and a respiratory organ.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"swim bladder development","synonyms":[{"name":"gas bladder development","type":"exact"}],"termid":"GO:0048794"}


id: MONDO:0001241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neutropenia","termid":"MONDO:0001475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"transient neonatal neutropenia","secondary_identifiers":["ICD10CM:P61.5","ICD9:776.7","UMLS:C0158997","MEDGEN:510688","SCTID:55444004","DOID:11245"],"termid":"MONDO:0001241","xrefs":{"Monarch":{"xref_id":"0001241"}}}


id: PBO:0112986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyltransferase; catalyzes trichothecene 3-O-acetylation, suggesting a possible role in trichothecene biosynthesis; localized to peroxisomes","termid":"PBO:0112986"}


id: PBO:0047578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FGFR1 oncogene partner 2 pseudogene 1","termid":"PBO:0047578"}


id: GO:0015641
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete lipoprotein toxin (obsolete GO:0015641)","synonyms":[{"name":"lipoprotein toxin","type":"exact"}],"termid":"GO:0015641"}


id: MONDO:1011405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diamond-Blackfan anemia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"anemia, non-human animal","termid":"MONDO:1012981"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Diamond-Blackfan anemia, non-human animal","secondary_identifiers":["OMIA:000041"],"termid":"MONDO:1011405","xrefs":{"Monarch":{"xref_id":"1011405"}}}


id: PBO:0015665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho-type GTPase activating protein Rga2","termid":"PBO:0015665"}


id: GO:0050176
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-phenylalanine + acetyl-CoA = N-acetyl-L-phenylalanine + CoA + H+.","definition_xrefs":["EC:2.3.1.53","RHEA:17801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino-acid N-acetyltransferase activity","termid":"GO:0140085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"L-phenylalanine N-acetyltransferase activity","secondary_identifiers":["MetaCyc:PHENYLALANINE-N-ACETYLTRANSFERASE-RXN","KEGG_REACTION:R00693"],"synonyms":[{"name":"acetyl-CoA-L-phenylalanine alpha-N-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:L-phenylalanine N-acetyltransferase activity","type":"related"},{"name":"phenylalanine N-acetyltransferase activity","type":"exact"}],"termid":"GO:0050176"}


id: PBO:0003224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecA family ATPase Rlp1","termid":"PBO:0003224"}


id: GO:1905043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of epithelium regeneration.","definition_xrefs":["PMID:23221517","GOC:BHF","GOC:rph","GO_REF:0000058","GOC:BHF_miRNA","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"regulation of epithelium regeneration","termid":"GO:1905041"},{"relation_name":"positively_regulates","term_name":"epithelium regeneration","termid":"GO:1990399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epithelium regeneration","synonyms":[{"name":"activation of epithelium regeneration","type":"narrow"},{"name":"activation of regeneration of epithelium","type":"narrow"},{"name":"positive regulation of regeneration of epithelium","type":"exact"},{"name":"up regulation of epithelium regeneration","type":"exact"},{"name":"up regulation of regeneration of epithelium","type":"exact"},{"name":"up-regulation of epithelium regeneration","type":"exact"},{"name":"up-regulation of regeneration of epithelium","type":"exact"},{"name":"upregulation of epithelium regeneration","type":"exact"},{"name":"upregulation of regeneration of epithelium","type":"exact"}],"termid":"GO:1905043"}


id: PBO:0001380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc ion transporter Zhf1","termid":"PBO:0001380"}


id: MONDO:0000373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma in situ involving a gall bladder.","definition_xrefs":["MONDO:patterns/carcinoma_in_situ"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gallbladder carcinoma","termid":"MONDO:0003220"},{"relation_name":"is_a","term_name":"in situ carcinoma","termid":"MONDO:0004647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"gall bladder carcinoma in situ","secondary_identifiers":["DOID:0050612","UMLS:C0345911","MEDGEN:87523","NCIT:C4439"],"synonyms":[{"name":"carcinoma in situ of gall bladder","type":"exact"},{"name":"gall bladder in situ carcinoma","type":"exact"},{"name":"stage 0 gall bladder carcinoma","type":"exact"}],"termid":"MONDO:0000373","xrefs":{"Monarch":{"xref_id":"0000373"}}}


id: PBO:0116314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial F1-FO ATP synthase chaperone, catalytic core Atp10","termid":"PBO:0116314"}


id: GO:0051411
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting selectively and non-covalently with ALP, actinin-associated LIM protein of the Z band. ALP is a PDZ/LIM domain protein found in the Z band.","definition_xrefs":["PMID:11699871"],"gene_count":0,"genotype_count":0,"name":"obsolete ALP binding (obsolete GO:0051411)","synonyms":[{"name":"ALP binding","type":"exact"},{"name":"actinin-associated LIM protein binding","type":"exact"}],"termid":"GO:0051411"}


id: GO:0004410
data:
  {"annotated_genes":["SJAG_04688"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77976],"is_not":false,"summary":null,"term":"GO:0004410"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + acetyl-CoA + H2O = CoA + H+ + homocitrate.","definition_xrefs":["RHEA:12929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04688":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"homocitrate synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:2.3.3.14","KEGG_REACTION:R00271","MetaCyc:HOMOCITRATE-SYNTHASE-RXN"],"synonyms":[{"name":"2-hydroxybutane-1,2,4-tricarboxylate 2-oxoglutarate-lyase (CoA- acetylating) activity","type":"related"},{"name":"2-hydroxybutane-1,2,4-tricarboxylate 2-oxoglutarate-lyase (CoA-acetylating)","type":"related"},{"name":"acetyl-CoA:2-oxoglutarate C-acetyltransferase (thioester-hydrolysing, carboxymethyl forming)","type":"related"},{"name":"acetyl-coenzyme A:2-ketoglutarate C-acetyl transferase activity","type":"related"},{"name":"homocitrate synthetase activity","type":"related"}],"termid":"GO:0004410","terms_by_termid":{"GO:0004410":null}}


id: GO:0036078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of tubulin heterodimers from the minus end of a microtubule.","definition_xrefs":["GOC:sart","PMID:17452528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule depolymerization","termid":"GO:0007019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0000226"],"is_obsolete":false,"name":"minus-end specific microtubule depolymerization","termid":"GO:0036078"}


id: PATO:0001800
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in an bearer by virtue of the quantities or relative ratios of water of the inhering entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"water composition","termid":"PATO:0001800"}


id: MONDO:0015351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by the association of sensorineural hearing impairment and peripheral neuropathy.","definition_xrefs":["Orphanet:139512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"neuropathy with hearing impairment","secondary_identifiers":["GARD:19919","SCTID:723497003","MEDGEN:1375726","UMLS:C4509933","icd11.foundation:129297527"],"termid":"MONDO:0015351","xrefs":{"Monarch":{"xref_id":"0015351"}}}


id: PBO:0091360
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complented by human HRAS","termid":"PBO:0091360"}


id: GO:0102486
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dCTP + 2 H2O = dCMP + 2 hydrogenphosphate + 2 H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete dCTP phosphohydrolase activity (obsolete GO:0102486)","termid":"GO:0102486"}


id: GO:0043928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of the transcript body of a nuclear-transcribed mRNA that occurs when the ends are not protected by the 3'-poly(A) tail.","definition_xrefs":["GOC:mtg_mpo"],"gene_count":0,"genotype_count":0,"name":"obsolete exonucleolytic catabolism of deadenylated mRNA (obsolete GO:0043928)","termid":"GO:0043928"}


id: PR:O13931
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atp18 gene.","definition_xrefs":["UniProtKB:O13931","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit J, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.11","synonyms":[{"name":"Spom972h-atp18","type":"exact"}],"termid":"PR:O13931"}


id: PBO:0045843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 33","termid":"PBO:0045843"}


id: GO:0102716
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A28 + 2-oxoglutarate + O2 = (2betaOH)-gibberellin28 + succinate + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gibberellin A28,oxoglutarate:oxygen oxidoreductase activity (obsolete GO:0102716)","termid":"GO:0102716"}


id: PBO:0067918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 220","termid":"PBO:0067918"}


id: GO:0045606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of epidermal cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"regulation of epidermal cell differentiation","termid":"GO:0045604"},{"relation_name":"is_a","term_name":"positive regulation of epidermis development","termid":"GO:0045684"},{"relation_name":"positively_regulates","term_name":"epidermal cell differentiation","termid":"GO:0009913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epidermal cell differentiation","synonyms":[{"name":"activation of epidermal cell differentiation","type":"narrow"},{"name":"positive regulation of hypodermal cell differentiation","type":"related"},{"name":"stimulation of epidermal cell differentiation","type":"narrow"},{"name":"up regulation of epidermal cell differentiation","type":"exact"},{"name":"up-regulation of epidermal cell differentiation","type":"exact"},{"name":"upregulation of epidermal cell differentiation","type":"exact"}],"termid":"GO:0045606"}


id: GO:0008847
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage to 3'-phosphomononucleotides and 3'-phosphooligonucleotides with 2',3'-cyclic phosphate intermediates.","definition_xrefs":["EC:4.6.1.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity","termid":"GO:0004521"},{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829","GO:0140098"],"is_obsolete":false,"name":"Enterobacter ribonuclease activity","secondary_identifiers":["MetaCyc:3.1.27.6-RXN"],"synonyms":[{"name":"Enterobacter RNase activity","type":"exact"}],"termid":"GO:0008847"}


id: MONDO:0859240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder with or without peripheral neuropathy","secondary_identifiers":["OMIM:619844","MEDGEN:1807523","UMLS:C5676969"],"termid":"MONDO:0859240","xrefs":{"Monarch":{"xref_id":"0859240"}}}


id: PBO:0029292
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_Mei2_nuclear_dot","termid":"PBO:0029292"}


id: PBO:0038598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA dehydrogenase very long chain","termid":"PBO:0038598"}


id: PBO:0069015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 259, pseudogene","termid":"PBO:0069015"}


id: FYPO:0006133
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phytosphingosine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular phytosphingosine level","synonyms":[{"name":"increased cellular phytosphingosine level during mitotic cell cycle","type":"related"},{"name":"increased cellular phytosphingosine level during vegetative growth","type":"exact"},{"name":"increased phytosphingosine accumulation","type":"related"}],"termid":"FYPO:0006133"}


id: MONDO:0000738
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndromic X-linked intellectual disability (obsolete MONDO:0000738)","termid":"MONDO:0000738","xrefs":{"Monarch":{"xref_id":"0000738"}}}


id: PR:Q10178-2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U2 snRNP component prp10 (Schizosaccharomyces pombe 972h-) that is a translation product of some mRNA giving rise to a protein with the amino acid sequence represented by UniProtKB:Q10178-2.","definition_xrefs":["PRO:DNx","UniProtKB:Q10178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"U2 snRNP component prp10 (Schizosaccharomyces pombe 972h-)","termid":"PR:Q10178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP component prp10 isoform B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.01","secondary_identifiers":["UniProtKB:Q10178-2"],"synonyms":[{"name":"Spom972h-SF3B1/iso:B","type":"exact"}],"termid":"PR:Q10178-2"}


id: GO:0036306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental growth that results in the increase in length of the embryonic heart tube. The embryonic heart tube is an epithelial tube that will give rise to the mature heart.","definition_xrefs":["PMID:15901664","GOC:BHF","GOC:gr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"embryonic heart tube development","termid":"GO:0035050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic heart tube elongation","termid":"GO:0036306"}


id: PATO:0000820
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000820 absolute taste acuity value (obsolete PATO:0000820)","termid":"PATO:0000820"}


id: PBO:0046627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 8","termid":"PBO:0046627"}


id: GO:0043533
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to inositol 1,3,4,5 tetrakisphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"inositol 1,3,4,5 tetrakisphosphate binding","synonyms":[{"name":"IP4 binding","type":"exact"},{"name":"InsP4 binding","type":"exact"}],"termid":"GO:0043533"}


id: PBO:0046563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 5","termid":"PBO:0046563"}


id: GO:0051926
data:
  {"annotated_genes":["SJAG_00296","SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115218,93030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of calcium ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of monoatomic ion transport","termid":"GO:0043271"},{"relation_name":"is_a","term_name":"regulation of calcium ion transport","termid":"GO:0051924"},{"relation_name":"negatively_regulates","term_name":"calcium ion transport","termid":"GO:0006816"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of calcium ion transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of calcium ion transport","type":"exact"},{"name":"down-regulation of calcium ion transport","type":"exact"},{"name":"downregulation of calcium ion transport","type":"exact"},{"name":"inhibition of calcium ion transport","type":"narrow"},{"name":"negative regulation of calcium transport","type":"exact"}],"termid":"GO:0051926","terms_by_termid":{"GO:1905949":null}}


id: MONDO:0010532
data:
  {"annotated_genes":["SJAG_00853"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88829],"is_not":false,"summary":null,"term":"MONDO:0010532"}]},"cv_name":"mondo","definition":"A rare form of spinal muscular atrophy characterized by the neonatal onset of severe hypotonia, areflexia, profound weakness, multiple congenital contractures, facial dysmorphic features (myopathic face with open, tent-shaped mouth), cryptorchidism, and mild skeletal abnormalities (i.e. kyphosis, scoliosis), that is often preceded by polyhydramnios and reduced fetal movements in utero and followed by bone fractures shortly after birth. SMAX2 patients often have a limited life span, often succumbing to the disease within 2 years, as muscle weakness is progressive and chest muscle involvement eventually leads to ventilatory insufficiency and respiratory failure.","definition_xrefs":["Orphanet:1145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal muscular atrophy","termid":"MONDO:0001516"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita","termid":"MONDO:0015168"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002320"],"is_obsolete":false,"name":"infantile-onset X-linked spinal muscular atrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:719836007","UMLS:C1844934","OMIM:301830","DOID:0111827","GARD:8521","MESH:C535380","MEDGEN:337123"],"synonyms":[{"name":"AMC, distal, X-linked","type":"related"},{"name":"SMAX2","type":"exact"},{"name":"X-linked distal arthrogryposis multiplex congenita","type":"exact"},{"name":"X-linked spinal muscular atrophy type 2","type":"exact"},{"name":"arthrogryposis multiplex congenita, distal, X-linked","type":"related"},{"name":"arthrogryposis, X-linked, type 1","type":"related"},{"name":"spinal muscular atrophy with arthrogryposis","type":"exact"},{"name":"spinal muscular atrophy, X-linked 2","type":"related"},{"name":"spinal muscular atrophy, X-linked 2, infantile, X-linked recessive","type":"exact"},{"name":"spinal muscular atrophy, X-linked lethal infantile","type":"related"},{"name":"spinal muscular atrophy, X-linked type 2","type":"exact"},{"name":"spinal muscular atrophy, infantile X-linked","type":"related"}],"termid":"MONDO:0010532","terms_by_termid":{"MONDO:0010532":null},"xrefs":{"Monarch":{"xref_id":"0010532"}}}


id: GO:0098596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Learning in which new behaviors are acquired through imitation.","definition_xrefs":["GOC:dos","Wikipedia:Imitative_learning&oldid=593192364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"observational learning","termid":"GO:0098597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imitative learning","secondary_identifiers":["Wikipedia:Imitative_learning","Wikipedia:Observational_learning#Observational_learning_compared_to_imitation"],"termid":"GO:0098596"}


id: PBO:0040593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BACH1 intronic transcript 3","termid":"PBO:0040593"}


id: PBO:0041914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellin 2 precursor","termid":"PBO:0041914"}


id: MONDO:0015306
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lemierre syndrome is a rare, potentially lethal, oropharyngeal infectious disease occurring in immunocompetent adolescents and young adults that is mainly due to Fusobacterium necrophorum and that is characterized by septic thrombophlebitis of the internal jugular vein that leads to septic, usually pulmonary, embolism, associated with ENT (ear, nose, and throat) infection that manifests with fever, neck pain, and tonsillopharyngitis.","definition_xrefs":["Orphanet:137839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"commensal bacterial infectious disease","termid":"MONDO:0000315"},{"relation_name":"is_a","term_name":"bacterial infectious disease with sepsis","termid":"MONDO:0005229"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lemierre syndrome","secondary_identifiers":["GARD:6882","SCTID:52542005","MEDGEN:6541","DOID:11337","MESH:D057831","ICD9:040.3","MedDRA:10065552","UMLS:C0027537"],"synonyms":[{"name":"Lemierre postanginal sepsis","type":"exact"},{"name":"Lemierre syndrome","type":"exact"},{"name":"Lemierre's syndrome","type":"related"},{"name":"acute sore throat","type":"related"},{"name":"human necrobacillosis","type":"exact"},{"name":"necrobacillosis","type":"related"},{"name":"oropharyngeal infection leading to secondary septic thrombophlebitis of the internal jugular vein","type":"related"},{"name":"postanginal sepsis","type":"exact"},{"name":"postanginal sepsis secondary to orophyngeal infection","type":"exact"},{"name":"septic phlebitis of the internal jugular vein","type":"exact"}],"termid":"MONDO:0015306","xrefs":{"Monarch":{"xref_id":"0015306"}}}


id: MONDO:0012529
data:
  {"annotated_genes":["SJAG_02585","SJAG_00468"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87633,87634],"is_not":false,"summary":null,"term":"MONDO:0012529"}]},"cv_name":"mondo","definition":"Any Diamond-Blackfan anemia in which the cause of the disease is a mutation in the RPS24 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Diamond-Blackfan anemia","termid":"MONDO:0015253"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00468":null,"SJAG_02585":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"Diamond-Blackfan anemia 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C176912","OMIM:610629","GARD:10241","UMLS:C1857719","MEDGEN:387892","DOID:0111887","MESH:C536355"],"synonyms":[{"name":"DBA3","type":"related"},{"name":"Diamond-Blackfan Anaemia type 3","type":"exact"},{"name":"Diamond-Blackfan Anemia type 3","type":"exact"},{"name":"Diamond-Blackfan anaemia caused by mutation in RPS24","type":"exact"},{"name":"Diamond-Blackfan anemia 3","type":"exact"},{"name":"Diamond-Blackfan anemia caused by mutation in RPS24","type":"exact"},{"name":"RPS24 Diamond-Blackfan anaemia","type":"exact"},{"name":"RPS24 Diamond-Blackfan anemia","type":"exact"},{"name":"anaemia Diamond-Blackfan 3","type":"related"},{"name":"anemia Diamond-Blackfan 3","type":"related"}],"termid":"MONDO:0012529","terms_by_termid":{"MONDO:0012529":null},"xrefs":{"Monarch":{"xref_id":"0012529"}}}


id: GO:0043508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of JUN kinase activity.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of MAP kinase activity","termid":"GO:0043407"},{"relation_name":"is_a","term_name":"regulation of JUN kinase activity","termid":"GO:0043506"},{"relation_name":"is_a","term_name":"negative regulation of JNK cascade","termid":"GO:0046329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of JUN kinase activity","synonyms":[{"name":"down regulation of JNK activity","type":"exact"},{"name":"down-regulation of JNK activity","type":"exact"},{"name":"downregulation of JNK activity","type":"exact"},{"name":"inhibition of JNK activity","type":"narrow"},{"name":"negative regulation of JUNK activity","type":"exact"}],"termid":"GO:0043508"}


id: FYPO:0004566
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which cells show increased sensitivity to caffeine during the second meiotic nuclear division. Cells stop growing (and may die) at a concentration of caffeine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical","termid":"FYPO:0002683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002683","FYPO:0000139","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to caffeine during meiosis II","synonyms":[{"name":"hypersensitive to caffeine during meiosis II","type":"exact"},{"name":"sensitive to caffeine during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0004566"}


id: PBO:0004858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RTT109 family histone lysine acetyltransferase","termid":"PBO:0004858"}


id: PBO:0066055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAP2C pseudogene 1","termid":"PBO:0066055"}


id: GO:0046249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of alpha-pinene, a monoterpene that may be a significant factor affecting bacterial activities in nature.","definition_xrefs":["PMID:14736461","PMID:29414896","PMID:10192895"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-pinene metabolic process","termid":"GO:0018867"},{"relation_name":"is_a","term_name":"pinene catabolic process","termid":"GO:0033074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"alpha-pinene catabolic process","synonyms":[{"name":"alpha-pinene breakdown","type":"exact"},{"name":"alpha-pinene catabolism","type":"exact"},{"name":"alpha-pinene degradation","type":"exact"}],"termid":"GO:0046249"}


id: GO:2000082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of L-ascorbic acid biosynthetic process.","definition_xrefs":["PMID:19395407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of vitamin metabolic process","termid":"GO:0030656"},{"relation_name":"is_a","term_name":"regulation of carbohydrate biosynthetic process","termid":"GO:0043255"},{"relation_name":"regulates","term_name":"L-ascorbic acid biosynthetic process","termid":"GO:0019853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150","GO:0006766"],"is_obsolete":false,"name":"regulation of L-ascorbic acid biosynthetic process","synonyms":[{"name":"regulation of L-ascorbic acid anabolism","type":"exact"},{"name":"regulation of L-ascorbic acid biosynthesis","type":"exact"},{"name":"regulation of L-ascorbic acid formation","type":"exact"},{"name":"regulation of L-ascorbic acid synthesis","type":"exact"},{"name":"regulation of ascorbate biosynthesis","type":"exact"},{"name":"regulation of ascorbate biosynthetic process","type":"exact"},{"name":"regulation of vitamin C biosynthesis","type":"exact"},{"name":"regulation of vitamin C biosynthetic process","type":"exact"}],"termid":"GO:2000082"}


id: GO:0045773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of axon extension.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell growth","termid":"GO:0030307"},{"relation_name":"is_a","term_name":"regulation of axon extension","termid":"GO:0030516"},{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"positive regulation of axonogenesis","termid":"GO:0050772"},{"relation_name":"positively_regulates","term_name":"axon extension","termid":"GO:0048675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of axon extension","synonyms":[{"name":"activation of axon extension","type":"narrow"},{"name":"stimulation of axon extension","type":"narrow"},{"name":"up regulation of axon extension","type":"exact"},{"name":"up-regulation of axon extension","type":"exact"},{"name":"upregulation of axon extension","type":"exact"}],"termid":"GO:0045773"}


id: PBO:0061086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK2 homeobox 4","termid":"PBO:0061086"}


id: PBO:0047357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 12","termid":"PBO:0047357"}


id: MONDO:0010678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy","termid":"MONDO:0020121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy, progressive Pectorodorsal","secondary_identifiers":["UMLS:C1839669","MESH:C564095","MEDGEN:326550","OMIM:310095"],"synonyms":[{"name":"muscular dystrophy, progressive Pectorodorsal","type":"exact"},{"name":"muscular dystrophy, progressive, involving shoulder girdle and back","type":"related"}],"termid":"MONDO:0010678","xrefs":{"Monarch":{"xref_id":"0010678"}}}


id: MONDO:0017727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fixed subaortic stenosis (FSS) is a rare heart malformation characterized by the obstruction by membranous or fibromuscular tissue of the left ventricular outflow tract (LVOT) below the aortic valve, that occurs as an isolated lesion or in association with additional cardiac malformations (e.g. ventricular septal defect, patent ductus arteriosus, coarctation of the aorta), that presents in childhood with signs of LVOT obstruction (e.g. dyspnea, chest pain, syncope, palpitations) and that can potentially lead to life-threatening complications (e.g. aortic regurgitation, infective endocarditis). It comprises three anatomical subforms: discrete fixed membranous subaortic stenosis (membranous tissue encircling the LVOT), discrete fibromuscular subaortic stenosis (fibromuscular tissue encircling the LVOT) and tunnel subaortic stenosis (fibromuscular diffuse tunnel-like narrowing of the LVOT), the two latter forms being generally more severe than the membranous form.","definition_xrefs":["Orphanet:3092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of the great arteries","termid":"MONDO:0020292"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fixed subaortic stenosis","secondary_identifiers":["icd11.foundation:1471062257","UMLS:C0265853","MEDGEN:539538","GARD:16619"],"termid":"MONDO:0017727","xrefs":{"Monarch":{"xref_id":"0017727"}}}


id: PBO:0012842
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Renal cell cancer","termid":"PBO:0012842"}


id: FYPO:0005790
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is curved along the long axis to form a \\\"J\\\" shape. In a curved cell, the long axis follows a smooth bend rather than a straight line. In a J-shaped cell, the curve is centered away from the midpoint of the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved vegetative cell","termid":"FYPO:0000016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000005"],"is_obsolete":false,"name":"J-shaped vegetative cell","synonyms":[{"name":"J-shaped cell","type":"exact"},{"name":"J-shaped cell during vegetative growth","type":"exact"},{"name":"J-shaped vegetative cell during mitotic cell cycle","type":"related"},{"name":"cell morphology, J-shaped","type":"exact"}],"termid":"FYPO:0005790"}


id: MONDO:1012080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"focal metatarsal fistula, non-human animal","termid":"MONDO:1011738"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focal metatarsal fistula, dog","secondary_identifiers":["OMIA:000389-9615"],"termid":"MONDO:1012080","xrefs":{"Monarch":{"xref_id":"1012080"}}}


id: GO:0051994
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group to the phosphorus atom of an acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"P-methyltransferase activity","termid":"GO:0051994"}


id: PBO:0038455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptosis associated transcript in bladder cancer","termid":"PBO:0038455"}


id: PBO:0005324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane ATPase Msp1 (predicted)","termid":"PBO:0005324"}


id: GO:0050979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a mechanical stimulus relating to a magnetic field, convert it to a molecular signal, and recognize and characterize the signal. A magnetic field exerts a torque on a ferromagnetic material (e.g. magnetite) or on a material with diamagnetic anisotropy; organisms that can detect this torque can use it to determine the orientation of the magnetic field.","definition_xrefs":["GOC:ai","Wikipedia:Magnetoception","PMID:15886990"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of mechanical stimulus","termid":"GO:0050954"},{"relation_name":"is_a","term_name":"magnetoreception","termid":"GO:0050958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"magnetoreception by sensory perception of mechanical stimulus","synonyms":[{"name":"magnetoreception through mechanical stimulus","type":"exact"},{"name":"magnetoreception, sensory perception of mechanical stimulus","type":"exact"},{"name":"magnetoreception, using mechanical stimulus","type":"exact"}],"termid":"GO:0050979"}


id: PBO:0017519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8 activating enzyme E1-type Uba3","termid":"PBO:0017519"}


id: PBO:0078556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 44","termid":"PBO:0078556"}


id: PBO:0014573
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Insertional Suppressor of Sme2-delta","termid":"PBO:0014573"}


id: GO:0006823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of heavy metal ions into, out of or within a cell, or between cells. Heavy metals are those that can form a coordination bond with a protein, as opposed to an alkali or alkaline-earth metal that can only form an ionic bond; this definition includes the following biologically relevant heavy metals: Cd, Co, Cu, Fe, Hg, Mn, Mo, Ni, V, W, Zn.","definition_xrefs":["GOC:kd","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete heavy metal ion transport (obsolete GO:0006823)","synonyms":[{"name":"heavy metal ion transport","type":"exact"}],"termid":"GO:0006823"}


id: MONDO:0017566
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"macrodactyly of toes","termid":"MONDO:0017475"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrodactyly of toes, unilateral","secondary_identifiers":["icd11.foundation:1009940304","MEDGEN:1843435","Orphanet:295243","UMLS:C5679988","GARD:21229"],"synonyms":[{"name":"macrodactyly of foot, unilateral","type":"exact"}],"termid":"MONDO:0017566","xrefs":{"Monarch":{"xref_id":"0017566"}}}


id: GO:0070150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling glycine to glycyl-tRNA in a mitochondrion, catalyzed by glycyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycyl-tRNA aminoacylation","termid":"GO:0006426"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0006399","GO:0140053","GO:0010467","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"mitochondrial glycyl-tRNA aminoacylation","termid":"GO:0070150"}


id: GO:0061772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a xenobiotic through the blood-nerve barrier.","definition_xrefs":["PMID:22733753","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic transport","termid":"GO:0042908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"xenobiotic transport across blood-nerve barrier","synonyms":[{"name":"drug transport across blood-nerve barrier","type":"related"},{"name":"drug transport across perineurial barrier","type":"exact"}],"termid":"GO:0061772"}


id: PBO:0028234
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_methionine_and_purine","termid":"PBO:0028234"}


id: PBO:0084185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone demethylase and transcription factor; regulates genes during nutrient limitation; activity modulated by proteasome-mediated proteolysis; has JmjC and JmjN domain in N-terminus that interact, promoting stability and proper transcriptional activity; contains two transactivating domains downstream of Jmj domains and a C-terminal DNA binding domain; relocalizes to the cytosol in response to hypoxia; GIS1 has a paralog, RPH1, that arose from the whole genome duplication","termid":"PBO:0084185"}


id: GO:0043835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: uracil + H2O + acceptor = barbiturate + reduced acceptor; and thymine + H2O + acceptor = 5-methylbarbiturate + reduced acceptor.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete uracil/thymine dehydrogenase activity (obsolete GO:0043835)","synonyms":[{"name":"uracil/thymine dehydrogenase activity","type":"exact"},{"name":"uracil:acceptor oxidoreductase activity","type":"narrow"}],"termid":"GO:0043835"}


id: PBO:0068565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 16, pseudogene","termid":"PBO:0068565"}


id: SO:0002056
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intronic splicing regulatory element that functions to recruit trans acting splicing factors suppress the transcription of the gene or genes they control.","definition_xrefs":["SO:ke","PMID:23241926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silencer","termid":"SO:0000625"},{"relation_name":"part_of","term_name":"intron","termid":"SO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intronic_splicing_silencer","synonyms":[{"name":"ISS","type":"exact"},{"name":"intronic splicing silencer","type":"exact"}],"termid":"SO:0002056"}


id: PBO:0055898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 19","termid":"PBO:0055898"}


id: PBO:0076188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO1 pseudogene 3","termid":"PBO:0076188"}


id: GO:1903625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of DNA catabolic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:2001740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of DNA metabolic process","termid":"GO:0051053"},{"relation_name":"is_a","term_name":"regulation of DNA catabolic process","termid":"GO:1903624"},{"relation_name":"negatively_regulates","term_name":"DNA catabolic process","termid":"GO:0006308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA catabolic process","synonyms":[{"name":"down regulation of DNA breakdown","type":"exact"},{"name":"down regulation of DNA catabolic process","type":"exact"},{"name":"down regulation of DNA catabolism","type":"exact"},{"name":"down regulation of DNA degradation","type":"exact"},{"name":"down-regulation of DNA breakdown","type":"exact"},{"name":"down-regulation of DNA catabolic process","type":"exact"},{"name":"down-regulation of DNA catabolism","type":"exact"},{"name":"down-regulation of DNA degradation","type":"exact"},{"name":"downregulation of DNA breakdown","type":"exact"},{"name":"downregulation of DNA catabolic process","type":"exact"},{"name":"downregulation of DNA catabolism","type":"exact"},{"name":"downregulation of DNA degradation","type":"exact"},{"name":"inhibition of DNA breakdown","type":"narrow"},{"name":"inhibition of DNA catabolic process","type":"narrow"},{"name":"inhibition of DNA catabolism","type":"narrow"},{"name":"inhibition of DNA degradation","type":"narrow"},{"name":"negative regulation of DNA breakdown","type":"exact"},{"name":"negative regulation of DNA catabolism","type":"exact"},{"name":"negative regulation of DNA degradation","type":"exact"}],"termid":"GO:1903625"}


id: PBO:0054367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1761","termid":"PBO:0054367"}


id: PBO:0028070
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_arrest_with_aseptate_mononucleate_cell","termid":"PBO:0028070"}


id: PBO:0112987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyltransferase required for biogenesis of small ribosomal subunit; conserved 18S rRNA cytosine acetyltransferase that modifies tRNAs assisted by adaptor Tan1p; responsible for incorporation of N4-acetylcytidine into mRNAs; human homolog NAT10 implicated in several types of cancer and premature aging","termid":"PBO:0112987"}


id: MONDO:0012945
data:
  {"annotated_genes":["SJAG_02289"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88572],"is_not":false,"summary":null,"term":"MONDO:0012945"}]},"cv_name":"mondo","definition":"Any amyotrophic lateral sclerosis in which the cause of the disease is a mutation in the FIG4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis type 11","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:612577","DOID:0060202","MEDGEN:393399","UMLS:C2675491","MESH:C567244","GARD:10496"],"synonyms":[{"name":"ALS11","type":"exact"},{"name":"FIG4 amyotrophic lateral sclerosis","type":"exact"},{"name":"amyotrophic lateral sclerosis 11","type":"exact"},{"name":"amyotrophic lateral sclerosis caused by mutation in FIG4","type":"exact"},{"name":"amyotrophic lateral sclerosis type 11","type":"exact"}],"termid":"MONDO:0012945","terms_by_termid":{"MONDO:0012945":null},"xrefs":{"Monarch":{"xref_id":"0012945"}}}


id: GO:0031370
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to eukaryotic initiation factor 4G, a polypeptide factor involved in the initiation of ribosome-mediated translation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation initiation factor binding","termid":"GO:0031369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"eukaryotic initiation factor 4G binding","synonyms":[{"name":"eIF4G binding","type":"exact"}],"termid":"GO:0031370"}


id: FYPO:0000384
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of macroautophagy is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal macroautophagy","termid":"FYPO:0000163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased macroautophagy","synonyms":[{"name":"autophagy: increased","type":"broad"}],"termid":"FYPO:0000384"}


id: GO:0030062
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any of the heteromeric enzymes, located in the mitochondrion, that act in the tricarboxylic acid (TCA) cycle.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial tricarboxylic acid cycle enzyme complex (obsolete GO:0030062)","synonyms":[{"name":"TCA cycle enzyme complex","type":"broad"}],"termid":"GO:0030062"}


id: GO:0002438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An acute inflammatory response to an antigenic stimulus. An acute inflammatory response occurs within a matter of minutes or hours, and either resolves within a few days or becomes a chronic inflammatory response.","definition_xrefs":["GOC:add","GO_REF:0000022","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory response to antigenic stimulus","termid":"GO:0002437"},{"relation_name":"is_a","term_name":"acute inflammatory response","termid":"GO:0002526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acute inflammatory response to antigenic stimulus","termid":"GO:0002438"}


id: PR:Q09830
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4G8.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC domain-containing protein C4G8.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.04","synonyms":[{"name":"Spom972h-SPAC4G8.04","type":"exact"}],"termid":"PR:Q09830"}


id: MONDO:0020202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete conjunctival lymphangiectasia (obsolete MONDO:0020202)","secondary_identifiers":["ICD9:372.89","Orphanet:98614","SCTID:231871007"],"termid":"MONDO:0020202","xrefs":{"Monarch":{"xref_id":"0020202"}}}


id: FYPO:0001784
data:
  {"alleles_by_uniquename":{"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121243,121244,121246,121255,121258],"is_not":false,"summary":null,"term":"FYPO:0001784"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more endoplasmic reticulum (ER) membrane than normal. Excess ER membranes may form abnormal structures.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endoplasmic reticulum morphology","termid":"FYPO:0000354"},{"relation_name":"is_a","term_name":"excess intracellular endomembrane system present","termid":"FYPO:0002652"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01906":null,"SJAG_02763":null,"SJAG_03940":null},"genotype_count":5,"genotypes_by_uniquename":{"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"excess endoplasmic reticulum membrane present","references_by_uniquename":{"PMID:26774782":null},"single_locus_annotated_genes":["SJAG_01906","SJAG_02763","SJAG_03940"],"single_locus_genotype_uniquenames":["nem1delta","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","nem2delta","ned1delta"],"synonyms":[{"name":"accumulated ER membrane","type":"exact"},{"name":"accumulated endoplasmic reticulum membrane","type":"exact"},{"name":"endoplasmic reticulum membrane present in greater amount","type":"exact"},{"name":"excess ER membrane present","type":"exact"},{"name":"excess endoplasmic reticulum membrane present during mitotic cell cycle","type":"related"},{"name":"excess endoplasmic reticulum membrane present during vegetative growth","type":"exact"},{"name":"increased endoplasmic reticulum membrane proliferation","type":"related"},{"name":"overdeveloped ER membrane","type":"exact"}],"termid":"FYPO:0001784","terms_by_termid":{"FYPO:0001784":null,"FYPO_EXT:0000001":null}}


id: PATO:0000039
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's orientation in space.","definition_xrefs":["thesaurus.maths:thesaurus.maths"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"direction","termid":"PATO:0000039"}


id: PBO:0069606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 883, pseudogene","termid":"PBO:0069606"}


id: PBO:0036187
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ectopic_CENP-A_containing_nucleosome_assembly","termid":"PBO:0036187"}


id: GO:0032489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Cdc42 protein signal transduction.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Rho protein signal transduction","termid":"GO:0035023"},{"relation_name":"regulates","term_name":"Cdc42 protein signal transduction","termid":"GO:0032488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of Cdc42 protein signal transduction","termid":"GO:0032489"}


id: MONDO:0021381
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the pericardium.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pericardium disorder","termid":"MONDO:0000474"},{"relation_name":"is_a","term_name":"neoplasm of thorax","termid":"MONDO:0021350"},{"relation_name":"is_a","term_name":"cardiovascular neoplasm","termid":"MONDO:0024757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"neoplasm of pericardium","secondary_identifiers":["MEDGEN:91156","SCTID:126734005","ICD9:239.89","UMLS:C0349574","NCIT:C4651"],"synonyms":[{"name":"neoplasm of pericardium","type":"exact"},{"name":"neoplasm of the pericardium","type":"exact"},{"name":"pericardial neoplasm","type":"exact"},{"name":"pericardial tumor","type":"exact"},{"name":"pericardial tumour","type":"exact"},{"name":"pericardium neoplasm","type":"exact"},{"name":"pericardium neoplasm (disease)","type":"exact"},{"name":"pericardium tumor","type":"exact"},{"name":"pericardium tumour","type":"exact"},{"name":"tumor of pericardium","type":"exact"},{"name":"tumor of the pericardium","type":"exact"},{"name":"tumour of pericardium","type":"exact"},{"name":"tumour of the pericardium","type":"exact"}],"termid":"MONDO:0021381","xrefs":{"Monarch":{"xref_id":"0021381"}}}


id: PBO:0087271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ser/Thr protein kinase and subunit of TFIIK, a TFIIH subassembly; phosphorylates the C-terminal domain (CTD) of RNAPII (Ser5 and Ser7); facilitates recruitment of mRNA 5'-capping and polyadenylation factors to the RNAPII holoenzyme complex; minor role in RNAPII transcription; role in RNAPI transcription; regulates Atg1p kinase complex assembly during nitrogen starvation induced autophagy; associates with cyclin Ccl1p; relocalizes to the cytosol in response to hypoxia; ortholog of human CDK7","termid":"PBO:0087271"}


id: PBO:0111904
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEMD3 domain","termid":"PBO:0111904"}


id: PBO:0017833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylglycerol phospholipase C Pgc1 (predicted)","termid":"PBO:0017833"}


id: GO:0008166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete viral replication (obsolete GO:0008166)","synonyms":[{"name":"viral replication","type":"exact"}],"termid":"GO:0008166"}


id: PBO:0089110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human NEDD4 family-interacting protein ortholog","termid":"PBO:0089110"}


id: PBO:0039390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"archaelysin family metallopeptidase 1","termid":"PBO:0039390"}


id: PBO:0084131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hexose transporter; capable of transporting a broad range of substrates including: glucose, fructose, mannose and galactose; polyol transporter that supports the growth on and uptake of xylitol with low affinity when overexpressed in a strain deleted for hexose family members; nearly identical in sequence to Hxt9p; has similarity to major facilitator superfamily (MFS) transporters; involved in pleiotropic drug resistance","termid":"PBO:0084131"}


id: MONDO:1011288
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Night blindness that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"night blindness, non-human animal","termid":"MONDO:1010359"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"night blindness, cattle","secondary_identifiers":["OMIA:002580-9913"],"termid":"MONDO:1011288","xrefs":{"Monarch":{"xref_id":"1011288"}}}


id: PBO:0074133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 34 member 1","termid":"PBO:0074133"}


id: PBO:0084823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein, regulator of COB mRNA stability and translation; interacts with the 5'-untranslated region of the COB mRNA; found in a complex at the inner membrane along with Pet309p; localizes to mitochondrial foci upon DNA replication stress","termid":"PBO:0084823"}


id: GO:0008984
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protein L-glutamate O(5)-methyl ester + H2O = protein L-glutamate + methanol.","definition_xrefs":["EC:3.1.1.61","RESID:AA0072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methylesterase activity","termid":"GO:0051723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0140096","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"protein-glutamate methylesterase activity","secondary_identifiers":["MetaCyc:MCPMETEST-RXN","RHEA:23236"],"synonyms":[{"name":"CheB methylesterase activity","type":"narrow"},{"name":"chemotaxis-specific methylesterase activity","type":"narrow"},{"name":"methyl-accepting chemotaxis protein methyl-esterase activity","type":"narrow"},{"name":"methylesterase CheB activity","type":"narrow"},{"name":"protein-L-glutamate-5-O-methyl-ester acylhydrolase activity","type":"related"},{"name":"protein-L-glutamate-O5-methyl-ester acylhydrolase activity","type":"related"}],"termid":"GO:0008984"}


id: GO:0060986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of a hormone into the circulatory system.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone secretion","termid":"GO:0046879"},{"relation_name":"part_of","term_name":"endocrine process","termid":"GO:0050886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"endocrine hormone secretion","termid":"GO:0060986"}


id: PBO:0074826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 22","termid":"PBO:0074826"}


id: GO:0099645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a neurotransmitter is transported to, or maintained in, a location within the membrane adjacent to a postsynaptic specialization (e.g. postsynaptic density).","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"receptor localization to synapse","termid":"GO:0097120"},{"relation_name":"is_a","term_name":"regulation of postsynaptic membrane neurotransmitter receptor levels","termid":"GO:0099072"},{"relation_name":"is_a","term_name":"protein localization to postsynaptic specialization membrane","termid":"GO:0099633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"neurotransmitter receptor localization to postsynaptic specialization membrane","synonyms":[{"name":"neurotransmitter receptor localisation in postsynaptic specialization membrane","type":"exact"}],"termid":"GO:0099645"}


id: PBO:0051281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-16","termid":"PBO:0051281"}


id: PBO:0113168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane peptide transporter; mediates transport of di- and tri-peptides; conserved protein that contains 12 transmembrane domains; PTR2 expression is regulated by N-end rule pathway via repression by Cup9p; targeted to vacuole via AP-3 pathway","termid":"PBO:0113168"}


id: PBO:0063536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ domain containing ring finger 4","termid":"PBO:0063536"}


id: MONDO:0015024
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any ectodermal dysplasia syndrome in which the cause of the disease is a mutation in the KDF1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia 12, hypohidrotic/hair/tooth/nail type","secondary_identifiers":["MEDGEN:934583","GARD:18593","UMLS:C4310616","DOID:0111652","OMIM:617337"],"synonyms":[{"name":"ECTD12","type":"exact"},{"name":"KDF1 ectodermal dysplasia syndrome","type":"exact"},{"name":"ectodermal dysplasia 12, hypohidrotic/hair/Tooth/nail type","type":"exact"},{"name":"ectodermal dysplasia 12, hypohidrotic/hair/tooth/nail type; ECTD12","type":"exact"},{"name":"ectodermal dysplasia syndrome caused by mutation in KDF1","type":"exact"}],"termid":"MONDO:0015024","xrefs":{"Monarch":{"xref_id":"0015024"}}}


id: FYPO:0000778
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which double-strand break repair begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal double-strand break repair during vegetative growth","termid":"FYPO:0000777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000298","FYPO:0000002","FYPO:0000293","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"delayed onset of double-strand break repair","synonyms":[{"name":"delayed double-strand break repair","type":"exact"},{"name":"delayed onset of double-strand break repair during mitotic cell cycle","type":"related"},{"name":"delayed onset of double-strand break repair during vegetative growth","type":"exact"}],"termid":"FYPO:0000778"}


id: GO:1903564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to cilium.","definition_xrefs":["GO_REF:0000058","GOC:krc","GOC:cilia","PMID:22072986","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to cilium","termid":"GO:0061512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to cilium","termid":"GO:1903564"}


id: FYPO:0003796
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from an RNA polymerase II promoter does not occur. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah","PMID:16874521"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished transcription during vegetative growth","termid":"FYPO:0001443"},{"relation_name":"is_a","term_name":"decreased transcription from RNA polymerase II promoter during vegetative growth","termid":"FYPO:0005229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000294","FYPO:0001985","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"abolished transcription from RNA polymerase II promoter","synonyms":[{"name":"abolished transcription from RNA polymerase II promoter during mitotic cell cycle","type":"related"},{"name":"abolished transcription from RNA polymerase II promoter during vegetative growth","type":"exact"},{"name":"transcription from RNA polymerase II promoter abolished","type":"exact"}],"termid":"FYPO:0003796"}


id: MONDO:0020399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypoplasia of the mitral valve annulus is a rare, congenital, mitral valve malformation characterized by hypoplastic annulus which usually appears within a complete mitral valve hypoplasia, causing mitral valve stenosis. Association with other cardiac malformation is common, including coarctation of the aorta, aortic valve stenosis, Shone complex and hypoplastic left heart syndrome.","definition_xrefs":["Orphanet:99058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital mitral valve insufficiency and/or stenosis","termid":"MONDO:0019817"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypoplasia of the mitral valve annulus","secondary_identifiers":["UMLS:C3165203","GARD:19625","ICD10CM:Q23.2","ICD9:746.89","SCTID:449270002","MEDGEN:757607"],"termid":"MONDO:0020399","xrefs":{"Monarch":{"xref_id":"0020399"}}}


id: GO:0050806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell communication","termid":"GO:0010647"},{"relation_name":"is_a","term_name":"positive regulation of signaling","termid":"GO:0023056"},{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"positively_regulates","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of synaptic transmission","synonyms":[{"name":"activation of synaptic transmission","type":"narrow"},{"name":"stimulation of synaptic transmission","type":"narrow"},{"name":"up regulation of synaptic transmission","type":"exact"},{"name":"up-regulation of synaptic transmission","type":"exact"},{"name":"upregulation of synaptic transmission","type":"exact"}],"termid":"GO:0050806"}


id: MONDO:0007910
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoprotein types--Lt system","secondary_identifiers":["MEDGEN:322644","UMLS:C1835359","OMIM:152300"],"synonyms":[{"name":"lipoprotein types--Lt system","type":"exact"}],"termid":"MONDO:0007910","xrefs":{"Monarch":{"xref_id":"0007910"}}}


id: MONDO:0023217
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gastro-enteropancreatic neuroendocrine tumor (obsolete MONDO:0023217)","termid":"MONDO:0023217","xrefs":{"Monarch":{"xref_id":"0023217"}}}


id: GO:0008619
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate.","definition_xrefs":["EC:3.6.1.47","PMID:12893813"],"gene_count":0,"genotype_count":0,"name":"obsolete RHEB small monomeric GTPase activity (obsolete GO:0008619)","synonyms":[{"name":"RHEB small monomeric GTPase activity","type":"exact"}],"termid":"GO:0008619"}


id: PBO:0047930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(11)(q13)","termid":"PBO:0047930"}


id: MONDO:0011897
data:
  {"annotated_genes":["SJAG_04934","SJAG_00637"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87966,87967],"is_not":false,"summary":null,"term":"MONDO:0011897"}]},"cv_name":"mondo","definition":"A hypomyelinating leukodystrophy characterized by autosomal recessive inheritance of childhood onset of progressive motor decline manifest as spasticity, ataxia, tremor, and cerebellar signs, as well as mild cognitive regression that has material basis in homozygous or compound heterozygous mutation in the POLR3A gene on chromosome 10q22.","definition_xrefs":["DOID:0060794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"POLR3A-related disorder","termid":"MONDO:0700276"},{"relation_name":"is_a","term_name":"POLR3-related leukodystrophy","termid":"MONDO:0700282"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00637":null,"SJAG_04934":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"leukodystrophy, hypomyelinating, 7, with or without oligodontia and/or hypogonadotropic hypogonadism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1639554","UMLS:C4706676","NANDO:2201297","OMIM:607694","GARD:16948","SCTID:721846006","NANDO:1200585"],"synonyms":[{"name":"4H syndrome","type":"exact"},{"name":"HLD7","type":"exact"},{"name":"ataxia-delayed dentition-hypomyelination syndrome; odontoleukodystrophy","type":"exact"},{"name":"hypomyelinating leukodystrophy 7 with or without oligodontia and-or hypogonadotropic hypogonadism","type":"exact"},{"name":"leukodystrophy, hypomyelinating, 7, with or without oligodontia and/or hypogonadotropic hypogonadism","type":"exact"},{"name":"leukodystrophy, hypomyelinating, with hypodontia and hypogonadotropic hypogonadism","type":"exact"},{"name":"leukoencephalopathy, hypomyelinating, with ataxia and delayed dentition","type":"exact"},{"name":"leukoencephalopathy-ataxia-hypodontia-hypomyelination syndrome","type":"exact"}],"termid":"MONDO:0011897","terms_by_termid":{"MONDO:0011897":null},"xrefs":{"Monarch":{"xref_id":"0011897"}}}


id: GO:0048256
data:
  {"annotated_genes":["SJAG_04183","SJAG_01832","SJAG_01044","SJAG_05237","SJAG_03994","SJAG_01648","SJAG_01173"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048257"},{"annotations":[74511,73014,76301,77336,80213,67774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017108"}]},"cv_name":"molecular_function","definition":"Catalysis of the cleavage of a flap structure in DNA, but not other DNA structures; processes the ends of Okazaki fragments in lagging strand DNA synthesis.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity","termid":"GO:0004520"},{"relation_name":"is_a","term_name":"hydrolase activity, acting on ester bonds","termid":"GO:0016788"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01044":null,"SJAG_01173":null,"SJAG_01648":null,"SJAG_01832":null,"SJAG_03994":null,"SJAG_04183":null,"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824","GO:0140097"],"is_obsolete":false,"name":"flap endonuclease activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0048256","terms_by_termid":{"GO:0017108":null,"GO:0048257":null}}


id: PBO:0031848
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spore_morphology","termid":"PBO:0031848"}


id: PBO:0079033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon AAC) 2-1","termid":"PBO:0079033"}


id: GO:0140262
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a mRNA cap binding complex.","definition_xrefs":["PMID:16938833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"mRNA cap binding complex binding","termid":"GO:0140262"}


id: MONDO:0015843
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"uterine disorder","termid":"MONDO:0002654"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine hypoplasia","secondary_identifiers":["MedDRA:10063146","Orphanet:180139","UMLS:C0266399","icd11.foundation:1858530341","GARD:20184","MEDGEN:120575"],"termid":"MONDO:0015843","xrefs":{"Monarch":{"xref_id":"0015843"}}}


id: PBO:0046282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMAP like 1","termid":"PBO:0046282"}


id: FYPO:0007115
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortical nodes is abolished, and the protein is present in the cytoplasm instead, during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to medial cortical node, with protein mislocalized to cytoplasm","termid":"FYPO:0004735"},{"relation_name":"is_a","term_name":"abolished protein localization to medial cortical node during mitotic interphase","termid":"FYPO:0007139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to medial cortical node, with protein mislocalized to cytoplasm during mitotic interphase","synonyms":[{"name":"abolished protein localisation to medial cortical node, with protein mislocalised to cytoplasm during mitotic interphase","type":"exact"},{"name":"abolished protein localization to cortical medial dot, with protein mislocalized to cytoplasm during mitotic interphase","type":"exact"},{"name":"abolished protein localization to cytokinetic nodes, with protein mislocalized to cytoplasm during mitotic interphase","type":"related"},{"name":"abolished protein localization to medial cortical node, with protein mislocalized to cytoplasm, during interphase during vegetative growth","type":"exact"},{"name":"abolished protein localization to medial cortical node, with protein mislocalized to cytoplasm, during interphase of mitotic cell cycle","type":"exact"},{"name":"abolished protein localization to medial cortical nodes, with protein mislocalized to cytoplasm during mitotic interphase","type":"exact"},{"name":"abolished protein recruitment to medial cortical node, with protein mislocalized to cytoplasm during mitotic interphase","type":"related"},{"name":"protein localization to medial cortical node abolished, with protein mislocalized to cytoplasm during mitotic interphase","type":"exact"}],"termid":"FYPO:0007115"}


id: GO:1990206
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: jasmonyl-Ile + H2O = jasmonic acid + L-isoleucine.","definition_xrefs":["PMID:23943861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"jasmonyl-Ile conjugate hydrolase activity","synonyms":[{"name":"JA-Ile hydrolase","type":"related"}],"termid":"GO:1990206"}


id: MONDO:0009092
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare inherited leukodystrophy characterized by progressive presenile dementia associated with recurrent bone fractures due to polycystic osseous lesions of the lower and upper extremities.","definition_xrefs":["Orphanet:2770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"},{"relation_name":"is_a","term_name":"primary osteolysis","termid":"MONDO:0019707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"polycystic lipomembranous osteodysplasia with sclerosing leukoencephaly","secondary_identifiers":["DOID:0090112","GARD:9921","MEDGEN:387795","ICD9:758.89","SCTID:702347001","OMIMPS:221770","NANDO:1200658","UMLS:C1857316"],"synonyms":[{"name":"NHD","type":"exact"},{"name":"Nasu-Hakola disease","type":"exact"},{"name":"PLO-SL","type":"exact"},{"name":"PLOSL","type":"exact"},{"name":"brain-bone-fat disease","type":"related"},{"name":"dementia, prefrontal, with bone cysts","type":"related"},{"name":"dementia, progressive, with lipomembranous polycystic osteodysplasia","type":"related"},{"name":"polycystic lipomembranous osteodysplasia with sclerosing leukoencephalopathy","type":"exact"},{"name":"polycystic lipomembranous osteodysplasia with sclerosing leukoencephaly","type":"exact"},{"name":"presenile dementia with bone cysts","type":"exact"},{"name":"progressive dementia with lipomembranous polycystic osteodysplasia; brain-bone-fat disease","type":"exact"}],"termid":"MONDO:0009092","xrefs":{"Monarch":{"xref_id":"0009092"}}}


id: MONDO:0016670
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic hemoglobinopathy characterized by all the characteristics of sickle cell anemia (SCA). Clinical course is similar to SCA, including acute episodes of pain, splenic infarction and splenic sequestration crisis, vaso-occlusive crisis, acute chest syndrome, ischemic brain injury, osteomyelitis and avascular bone necrosis. The genotype is characterized by an HbS allele in combination with the HbD variant, beta121Glu>Gln.","definition_xrefs":["Orphanet:251370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inherited hemoglobinopathy","termid":"MONDO:0019050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"sickle cell-hemoglobin d disease syndrome","secondary_identifiers":["GARD:12458","MEDGEN:452366","UMLS:C0272084","MedDRA:10056724"],"synonyms":[{"name":"HbSD disease","type":"exact"},{"name":"sickle cell - haemoglobin D disease","type":"related"},{"name":"sickle cell - hemoglobin D disease","type":"related"}],"termid":"MONDO:0016670","xrefs":{"Monarch":{"xref_id":"0016670"}}}


id: GO:0120286
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of tryptophan.","definition_xrefs":["GOC:krc","PMID:31498992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid sensor activity","termid":"GO:0140785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0140299","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"tryptophan sensor activity","synonyms":[{"name":"tryptophan sensing activity","type":"exact"}],"termid":"GO:0120286"}


id: PBO:0077275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 14C","termid":"PBO:0077275"}


id: PBO:0060111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 12","termid":"PBO:0060111"}


id: PBO:0034591
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-split_kinetochore_during_vegetative_growth","termid":"PBO:0034591"}


id: PBO:0017957
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wilson disease","termid":"PBO:0017957"}


id: GO:0030613
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a phosphorus- or arsenic-containing group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["EC:1.20.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on phosphorus or arsenic in donors","synonyms":[{"name":"oxidoreductase activity, acting on phosphorus or arsenic in donors, with other acceptors","type":"narrow"}],"termid":"GO:0030613"}


id: PBO:0067841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 143","termid":"PBO:0067841"}


id: PBO:0071648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 12","termid":"PBO:0071648"}


id: PR:Q10310
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug68 gene.","definition_xrefs":["UniProtKB:Q10310","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 68 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6C3.07","synonyms":[{"name":"Spom972h-mug68","type":"exact"}],"termid":"PR:Q10310"}


id: MONDO:0023093
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"headache disorder","termid":"MONDO:0021146"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exertional headache","secondary_identifiers":["UMLS:C2363911","MEDGEN:1780177"],"synonyms":[{"name":"primary Exertional headache","type":"related"},{"name":"primary headache associated with sexual activity","type":"related"}],"termid":"MONDO:0023093","xrefs":{"Monarch":{"xref_id":"0023093"}}}


id: PBO:0084334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinesin-related motor protein; tracks plus-ends and stabilizes microtubules; required for mitotic spindle assembly, chromosome segregation, and 2 micron plasmid partitioning; functionally redundant with Cin8p for chromosomal but not plasmid functions","termid":"PBO:0084334"}


id: MONDO:1011438
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephroma that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm, non-human animal","termid":"MONDO:0700098"},{"relation_name":"is_a","term_name":"renal disease, non-human animal","termid":"MONDO:1011909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephroma, non-human animal","secondary_identifiers":["OMIA:001113"],"termid":"MONDO:1011438","xrefs":{"Monarch":{"xref_id":"1011438"}}}


id: PBO:0054065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1412","termid":"PBO:0054065"}


id: GO:1904502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lipophagy.","definition_xrefs":["GOC:TermGenie","GOC:autophagy","PMID:25383539","GO_REF:0000058","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macroautophagy","termid":"GO:0016241"},{"relation_name":"regulates","term_name":"lipophagy","termid":"GO:0061724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"regulation of lipophagy","termid":"GO:1904502"}


id: PATO:0002375
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape quality inhering in a bearer by virtue of the bearer's shape form resembling the shape of a trumpet.","definition_xrefs":["PATOC:DS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trumpet-shaped","termid":"PATO:0002375"}


id: PBO:0026895
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_phosphorylation_of_RNA_polymerase_II_C-terminal_domain_serine_2_residues_during_nitrogen_starvation","termid":"PBO:0026895"}


id: PBO:0000470
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.14.13.70","termid":"PBO:0000470"}


id: PBO:0051893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha 2b","termid":"PBO:0051893"}


id: PBO:0046043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit B","termid":"PBO:0046043"}


id: MONDO:0015681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare pervasive developmental disorder with a disease onset before the age of three and characterized by a dramatic loss of behavioral and developmental functioning after atleast two years of normal development. Manifestations of the disease include loss of speech, incontinence, communication and social interaction problems, stereotypical autistic behaviors and dementia.","definition_xrefs":["Orphanet:168782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pervasive developmental disorder","termid":"MONDO:0000594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"childhood disintegrative disorder","secondary_identifiers":["SCTID:71961003","UMLS:C0236791","icd11.foundation:1460615954","SCTID:61831009","GARD:6040","ICD9:299.1","NCIT:C97164","MEDGEN:472967","DOID:13487","MedDRA:10008522"],"synonyms":[{"name":"childhood disintegrative disease","type":"exact"},{"name":"dementia infantilis","type":"exact"},{"name":"disintegrative psychosis","type":"exact"},{"name":"heller syndrome","type":"exact"},{"name":"heller's syndrome","type":"exact"},{"name":"symbiotic psychosis","type":"exact"}],"termid":"MONDO:0015681","xrefs":{"Monarch":{"xref_id":"0015681"}}}


id: GO:0180051
data:
  {"annotated_genes":["SJAG_02017","SJAG_03629","SJAG_02307","SJAG_03996","SJAG_00662","SJAG_05271","SJAG_01643","SJAG_03472","SJAG_02856","SJAG_02628","SJAG_01438","SJAG_02601","SJAG_04772","SJAG_03732","SJAG_03223","SJAG_01696","SJAG_02180","SJAG_05221","SJAG_01851","SJAG_02738","SJAG_02353","SJAG_05332","SJAG_04351","SJAG_01117","SJAG_03433","SJAG_04891","SJAG_01487","SJAG_01576","SJAG_04744","SJAG_04635","SJAG_04283","SJAG_00786","SJAG_02995","SJAG_02189","SJAG_02390","SJAG_04981","SJAG_02164","SJAG_01954","SJAG_03788","SJAG_04900","SJAG_00507","SJAG_01659","SJAG_02376","SJAG_03678","SJAG_05003","SJAG_03232","SJAG_04157","SJAG_02812","SJAG_03461","SJAG_02493","SJAG_00466","SJAG_00308","SJAG_02471","SJAG_03147","SJAG_01518","SJAG_00338"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75388,74412,81539,57341,78816,70436,81861,120362,79522,81712,79220,120840,93807,81273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003746"},{"annotations":[73761,79373,73969,70259,76233,82025,80821,107440,76160,60159,79195,77375,74233,73340,79759,73656,78935,60938,74214,58443,76544,64700,117482,75661,62996,89334,107415,61899,79367,73135,75956,78325,80259,76911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003743"},{"annotations":[67539,109012,117895,70390,74079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003747"},{"annotations":[100465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016150"},{"annotations":[75587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016149"},{"annotations":[111017,111018,106533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008079"}]},"cv_name":"molecular_function","definition":"A molecular function required for translation of a mRNA into a protein functioning as part of initiation, elongation or termination of translation.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":56,"genes_by_uniquename":{"SJAG_00308":null,"SJAG_00338":null,"SJAG_00466":null,"SJAG_00507":null,"SJAG_00662":null,"SJAG_00786":null,"SJAG_01117":null,"SJAG_01438":null,"SJAG_01487":null,"SJAG_01518":null,"SJAG_01576":null,"SJAG_01643":null,"SJAG_01659":null,"SJAG_01696":null,"SJAG_01851":null,"SJAG_01954":null,"SJAG_02017":null,"SJAG_02164":null,"SJAG_02180":null,"SJAG_02189":null,"SJAG_02307":null,"SJAG_02353":null,"SJAG_02376":null,"SJAG_02390":null,"SJAG_02471":null,"SJAG_02493":null,"SJAG_02601":null,"SJAG_02628":null,"SJAG_02738":null,"SJAG_02812":null,"SJAG_02856":null,"SJAG_02995":null,"SJAG_03147":null,"SJAG_03223":null,"SJAG_03232":null,"SJAG_03433":null,"SJAG_03461":null,"SJAG_03472":null,"SJAG_03629":null,"SJAG_03678":null,"SJAG_03732":null,"SJAG_03788":null,"SJAG_03996":null,"SJAG_04157":null,"SJAG_04283":null,"SJAG_04351":null,"SJAG_04635":null,"SJAG_04744":null,"SJAG_04772":null,"SJAG_04891":null,"SJAG_04900":null,"SJAG_04981":null,"SJAG_05003":null,"SJAG_05221":null,"SJAG_05271":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"translation factor activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0180051","terms_by_termid":{"GO:0003743":null,"GO:0003746":null,"GO:0003747":null,"GO:0008079":null,"GO:0016149":null,"GO:0016150":null}}


id: MONDO:0002823
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thyroid gland medullary carcinoma (obsolete MONDO:0002823)","termid":"MONDO:0002823","xrefs":{"Monarch":{"xref_id":"0002823"}}}


id: MONDO:0022236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Colpocephaly is a congenital brain abnormality in which the occipital horns - the posterior or rear portion of the lateral ventricles (cavities) of the brain - are larger than normal because white matter in the posterior cerebrum has failed to develop or thicken.","definition_xrefs":["GARD:0010008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colpocephaly","secondary_identifiers":["icd11.foundation:845275248","UMLS:C0431384","MESH:C535973","SCTID:253160006","MEDGEN:98131","MONDO:0022808"],"termid":"MONDO:0022236","xrefs":{"Monarch":{"xref_id":"0022236"}}}


id: GO:0102866
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an (8Z,11Z,14Z)-icosatrienoyl-containing glycerolipid + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = (5Z,8Z,11Z,14Z)-eicosatetraenoyl-containing glycerolipid + 2 Fe(III)-[cytochrome b5] + 2 H2O. Also converts an (8Z,11Z,14Z,17Z)-eicosatetraenoyl-containing glycerolipid into a (5Z,8Z,11Z,14Z,17Z)-eicosapentaenoyl-containing glycerolipid.","definition_xrefs":["EC:1.14.19.30"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"acyl-lipid (8-3)-desaturase activity","synonyms":[{"name":"Delta(5)-fatty-acid desaturase activity","type":"exact"},{"name":"acyl-lipid 5-desaturase activity","type":"related"},{"name":"di-homo-gamma-linolenate delta5 desaturase activity","type":"related"}],"termid":"GO:0102866"}


id: GO:0061511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The centrosome organization process by which a centriole increases in length as part of the process of replication.","definition_xrefs":["PMID:21576394","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"centriole replication","termid":"GO:0007099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0044085","GO:0007010","GO:0007049","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"centriole elongation","termid":"GO:0061511"}


id: PBO:0030296
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_cell_cortex","termid":"PBO:0030296"}


id: GO:0061454
data:
  {"annotated_genes":["SJAG_03850"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110506],"is_not":false,"summary":null,"term":"GO:0061454"}]},"cv_name":"biological_process","definition":"The directed movement of calcium ions (Ca2+) out of the Golgi apparatus into the cytosol.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"release of sequestered calcium ion into cytosol","termid":"GO:0051209"},{"relation_name":"is_a","term_name":"Golgi calcium ion transmembrane transport","termid":"GO:0061856"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"release of sequestered calcium ion into cytosol by Golgi","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Golgi calcium ion export","type":"broad"}],"termid":"GO:0061454","terms_by_termid":{"GO:0061454":null}}


id: PBO:0036178
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_elongated_cell_during_nitrogen_starvation","termid":"PBO:0036178"}


id: MONDO:0005975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the middle ear with purulent discharge.","definition_xrefs":["MESH:D010035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otitis media","termid":"MONDO:0005441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppurative otitis media","secondary_identifiers":["EFO:0007503","icd11.foundation:1528565412","UMLS:C0029888","SCTID:39288006","ICD9:382.4","ICD9:382","MEDGEN:10506","DOID:11506"],"synonyms":[{"name":"otitis media with effusion - purulent","type":"exact"},{"name":"purulent otitis media","type":"exact"}],"termid":"MONDO:0005975","xrefs":{"Monarch":{"xref_id":"0005975"}}}


id: GO:0045891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of transcription of homeotic genes of the trithorax group.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription of homeotic gene (trithorax group) (obsolete GO:0045891)","synonyms":[{"name":"negative regulation of transcription of homeotic gene (trithorax group)","type":"exact"}],"termid":"GO:0045891"}


id: PBO:0017443
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulated_by","termid":"PBO:0017443"}


id: PBO:0012242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteiasome complex subunit alpha 6 subunit Pre5 (predicted)","termid":"PBO:0012242"}


id: PBO:0050274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 4","termid":"PBO:0050274"}


id: PBO:0113565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex zeta subunit, Ost5","termid":"PBO:0113565"}


id: SO:0000745
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the genome of a chloroplast, a green plastid for photosynthesis.","direct_ancestors":[{"relation_name":"is_a","term_name":"plastid_sequence","termid":"SO:0000740"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloroplast_sequence","synonyms":[{"name":"chloroplast sequence","type":"exact"}],"termid":"SO:0000745"}


id: PBO:0076485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAR DNA binding protein","termid":"PBO:0076485"}


id: GO:0039558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces IRF7-dependent gene transcription, by promoting the sumoylation of IRF7, thereby disabling its activity.","definition_xrefs":["VZ:653","PMID:18635538","PMID:19694547"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host IRF7 activity by positive regulation of IRF7 sumoylation (obsolete GO:0039558)","synonyms":[{"name":"promotion of IRF-7 SUMOylation","type":"exact"},{"name":"suppression by virus of host interferon regulatory factor-7 activity by positive regulation of IRF7 sumoylation","type":"related"}],"termid":"GO:0039558"}


id: GO:0072708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sorbitol stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to carbohydrate","termid":"GO:0009743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to sorbitol","synonyms":[{"name":"response to glucitol","type":"exact"}],"termid":"GO:0072708"}


id: PBO:0085793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; completely overlaps the verified gene SLM1; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; mRNA identified as translated by ribosome profiling data","termid":"PBO:0085793"}


id: GO:0102524
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + O2 + 7-[(3S)-(3-amino-3-carboxypropyl)]-wyosine37 in tRNAPhe = succinate + carbon dioxide + 7-(2-hydroxy-3-amino-3-carboxypropyl)-wyosine37 in tRNAPhe.","definition_xrefs":["GOC:pz","RHEA:37899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0140101","GO:0140098","GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"tRNA(Phe) (7-(3-amino-3-carboxypropyl)wyosine37-C2)-hydroxylase activity","secondary_identifiers":["EC:1.14.11.42","MetaCyc:RXN-14538"],"synonyms":[{"name":"tRNAPhe (7-(3-amino-3-carboxypropyl)wyosine37-C2)-hydroxylase activity","type":"exact"}],"termid":"GO:0102524"}


id: PBO:0068033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 338","termid":"PBO:0068033"}


id: PBO:0058253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4540","termid":"PBO:0058253"}


id: PBO:0046208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C","termid":"PBO:0046208"}


id: MONDO:0003710
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ovarian malignant germ cell tumor characterized by the presence of at least two different germ cell components. At least one of the germ cell components is primitive. The most common combination of germ cell elements is dysgerminoma and yolk sac tumor.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian primitive germ cell tumor","termid":"MONDO:0003408"},{"relation_name":"is_a","term_name":"mixed germ cell tumor","termid":"MONDO:0015864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian mixed germ cell neoplasm","secondary_identifiers":["UMLS:C0280135","ONCOTREE:OMGCT","MEDGEN:83602","DOID:5936","NCIT:C8114"],"synonyms":[{"name":"mixed germ cell neoplasm of ovary","type":"exact"},{"name":"mixed germ cell neoplasm of the ovary","type":"exact"},{"name":"mixed germ cell tumor","type":"related"},{"name":"mixed germ cell tumor of ovary","type":"exact"},{"name":"mixed germ cell tumor of the ovary","type":"exact"},{"name":"mixed germ cell tumour","type":"related"},{"name":"mixed germ cell tumour of ovary","type":"exact"},{"name":"mixed germ cell tumour of the ovary","type":"exact"},{"name":"ovarian mixed germ cell neoplasm","type":"exact"},{"name":"ovarian mixed germ cell tumor","type":"exact"},{"name":"ovarian mixed germ cell tumour","type":"exact"},{"name":"ovary mixed germ cell tumor","type":"exact"},{"name":"ovary mixed germ cell tumour","type":"exact"}],"termid":"MONDO:0003710","xrefs":{"Monarch":{"xref_id":"0003710"}}}


id: PBO:0016890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin family meiotic suppressor protein Ste7","termid":"PBO:0016890"}


id: GO:0004278
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage of Asp-Xaa > Asn-Xaa > Met-Xaa, Ser-Xaa.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete granzyme B activity (obsolete GO:0004278)","synonyms":[{"name":"CCP1 proteinase","type":"narrow"},{"name":"CCPII","type":"related"},{"name":"CTLA1","type":"related"},{"name":"cytotoxic cell proteinase-1","type":"related"},{"name":"cytotoxic t-lymphocyte proteinase 2 activity","type":"narrow"},{"name":"granzyme B activity","type":"exact"},{"name":"granzyme G","type":"related"},{"name":"granzyme H","type":"related"}],"termid":"GO:0004278"}


id: PBO:0052442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF transcription factor 2","termid":"PBO:0052442"}


id: MONDO:0028743
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dysostosis with brachydactyly with extraskeletal manifestations (obsolete MONDO:0028743)","termid":"MONDO:0028743","xrefs":{"Monarch":{"xref_id":"0028743"}}}


id: PBO:0062230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily B member 3","termid":"PBO:0062230"}


id: GO:1901541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ent-pimara-8(14),15-diene.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene biosynthetic process","termid":"GO:0046246"},{"relation_name":"is_a","term_name":"ent-pimara-8(14),15-diene metabolic process","termid":"GO:1901539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"ent-pimara-8(14),15-diene biosynthetic process","synonyms":[{"name":"ent-pimara-8(14),15-diene anabolism","type":"exact"},{"name":"ent-pimara-8(14),15-diene biosynthesis","type":"exact"},{"name":"ent-pimara-8(14),15-diene formation","type":"exact"},{"name":"ent-pimara-8(14),15-diene synthesis","type":"exact"}],"termid":"GO:1901541"}


id: MONDO:0014532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn mitochondrial myopathy","termid":"MONDO:0009637"},{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"metabolic myopathy","termid":"MONDO:0020123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005336","MONDO:0005066"],"is_obsolete":false,"name":"autosomal dominant mitochondrial myopathy with exercise intolerance","secondary_identifiers":["OMIM:616209","GARD:17794","Orphanet:457050","UMLS:C4015513","DOID:0081357","MEDGEN:863950"],"synonyms":[{"name":"IMMD","type":"related"},{"name":"myopathy, isolated mitochondrial, autosomal dominant","type":"related"}],"termid":"MONDO:0014532","xrefs":{"Monarch":{"xref_id":"0014532"}}}


id: GO:0090368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the chemical reactions and pathways involving ornithine, an amino acid only rarely found in proteins, but which is important in living organisms as an intermediate in the reactions of the urea cycle and in arginine biosynthesis.","definition_xrefs":["GOC:dph","GOC:tb","GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid metabolic process","termid":"GO:0006521"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"ornithine metabolic process","termid":"GO:0006591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of ornithine metabolic process","termid":"GO:0090368"}


id: GO:0016723
data:
  {"annotated_genes":["SJAG_04459","SJAG_04042"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76296,80809],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030586"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction in which the metal ion is reduced and NAD+ or NADP+ acts as an electron acceptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on metal ions","termid":"GO:0016722"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04042":null,"SJAG_04459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on metal ions, NAD or NADP as acceptor","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:1.16.1.-"],"synonyms":[{"name":"oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor","type":"related"},{"name":"oxidoreductase activity, reducing metal ions, NAD or NADP as acceptor","type":"related"}],"termid":"GO:0016723","terms_by_termid":{"GO:0030586":null}}


id: PR:Q9P7J9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC24B10.06 gene.","definition_xrefs":["UniProtKB:Q9P7J9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24B10.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.06","synonyms":[{"name":"Spom972h-SPCC24B10.06","type":"exact"}],"termid":"PR:Q9P7J9"}


id: PBO:0005103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set1C PHD Finger protein Spf1","termid":"PBO:0005103"}


id: GO:0070822
data:
  {"annotated_genes":["SJAG_03230","SJAG_02439","SJAG_03441","SJAG_03255","SJAG_03884","SJAG_04576","SJAG_02981","SJAG_01804","SJAG_00349","SJAG_03867","SJAG_01230","SJAG_00441","SJAG_04758","SJAG_02846","SJAG_01110","SJAG_00868","SJAG_00581"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[63732,61573,77694,80718,64515,82008,90921,108580,77885,77566,79084,96452,116092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033698"},{"annotations":[78336,97263,95590,63731,74457,74710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032221"}]},"cv_name":"cellular_component","definition":"Any of a number of evolutionarily conserved histone deacetylase complexes (HDACs) containing a core consisting of a paired amphipathic helix motif protein (e.g. Sin3p in S. cerevisiae, Pst1 in S. pombe or Sin3A in mammals) at least one class I histone deacetylase (e.g. Rpd3p in S. cerevisiae, Clr6 in S. pombe, or HDAC1 and HDAC2 in mammals), and at least one WD40 repeat protein (e.g. Ume1p in S. cerevisiae, Prw1 in S. pombe, or RbAp46 and RbAp48 in mammals). These complexes also contain a variable number of other proteins that direct histone binding, DNA binding, or add other functionality to the complex.","definition_xrefs":["PMID:18292778","PMID:15565322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase complex","termid":"GO:0000118"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"},{"relation_name":"part_of","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00349":null,"SJAG_00441":null,"SJAG_00581":null,"SJAG_00868":null,"SJAG_01110":null,"SJAG_01230":null,"SJAG_01804":null,"SJAG_02439":null,"SJAG_02846":null,"SJAG_02981":null,"SJAG_03230":null,"SJAG_03255":null,"SJAG_03441":null,"SJAG_03867":null,"SJAG_03884":null,"SJAG_04576":null,"SJAG_04758":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991","GO:0005694","GO:0005654"],"is_obsolete":false,"name":"Sin3-type complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0070822","terms_by_termid":{"GO:0032221":null,"GO:0033698":null}}


id: PBO:0114380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface membrane anchored protein, probably carbohydrate binding domain","termid":"PBO:0114380"}


id: MONDO:0019298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare urticaria.","gene_count":0,"genotype_count":0,"name":"obsolete rare urticaria (obsolete MONDO:0019298)","secondary_identifiers":["Orphanet:79384"],"synonyms":[{"name":"rare hives","type":"exact"},{"name":"rare urticaria","type":"exact"},{"name":"rare urticaria (disease)","type":"exact"}],"termid":"MONDO:0019298","xrefs":{"Monarch":{"xref_id":"0019298"}}}


id: MONDO:0017591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic interstitial pneumonia","termid":"MONDO:0002429"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"combined pulmonary fibrosis-emphysema syndrome","secondary_identifiers":["GARD:21238","MEDGEN:838971","icd11.foundation:1361267223","Orphanet:300564","UMLS:C3872815"],"synonyms":[{"name":"CPFE","type":"exact"}],"termid":"MONDO:0017591","xrefs":{"Monarch":{"xref_id":"0017591"}}}


id: PBO:0040856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bridge-like lipid transfer protein family member 2","termid":"PBO:0040856"}


id: RO:0002606
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"c is a substance that treats d if c is a material entity (such as a small molecule or compound) and d is a pathological process, phenotype or disease, and c is capable of some activity that negative regulates or decreases the magnitude of d.","direct_ancestors":[{"relation_name":"is_a","term_name":"capable_of_inhibiting_or_preventing_pathological_process","termid":"RO:0002599"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_substance_that_treats","termid":"RO:0002606"}


id: MONDO:0020496
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of porencephaly that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebrovascular disorder","termid":"MONDO:0011057"},{"relation_name":"is_a","term_name":"porencephaly","termid":"MONDO:0017410"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial porencephaly","secondary_identifiers":["Orphanet:99810","GARD:2258","MEDGEN:401353","DOID:0112313","icd11.foundation:1833583032","OMIMPS:175780","UMLS:C1867983"],"synonyms":[{"name":"familial porencephalic white matter disease","type":"related"},{"name":"hereditary porencephaly","type":"exact"}],"termid":"MONDO:0020496","xrefs":{"Monarch":{"xref_id":"0020496"}}}


id: PBO:0074819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 18B","termid":"PBO:0074819"}


id: PBO:0067108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 150, pseudogene","termid":"PBO:0067108"}


id: GO:0099018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont evades the DNA restriction modification system of its host. This process occurs in phages to protein themselves from bacterial restriction enzyme systems. Some viruses encode their own methyltransferase in order to protect their genome from host restriction enzymes. Others directly inhibit restriction enzymes while some use unusual bases in their genome to avoid restriction.","definition_xrefs":["VZ:3966","PMID:20348932","PMID:24123737","PMID:23979432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated evasion of recognition by host innate immune effector","termid":"GO:0141177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated evasion of host restriction-modification system","synonyms":[{"name":"evasion by virus of host restriction-modification system","type":"related"},{"name":"evasion of host restriction-modification system","type":"exact"},{"name":"restriction-modification system evasion by virus","type":"exact"}],"termid":"GO:0099018"}


id: MONDO:0007465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distichiasis with congenital anomalies of the heart and peripheral vasculature","secondary_identifiers":["UMLS:C1852062","MEDGEN:338862","MESH:C565092","OMIM:126320","Orphanet:1683"],"synonyms":[{"name":"distichiasis with congenital anomalies of the heart and peripheral vasculature","type":"exact"},{"name":"distichiasis-congenital heart defects-peripheral vascular anomalies syndrome","type":"exact"}],"termid":"MONDO:0007465","xrefs":{"Monarch":{"xref_id":"0007465"}}}


id: GO:0003681
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to DNA in a bent conformation.","definition_xrefs":["GOC:jl","PMID:12627977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"bent DNA binding","termid":"GO:0003681"}


id: MONDO:0016406
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete other metabolic disease with epilepsy (obsolete MONDO:0016406)","secondary_identifiers":["Orphanet:225713"],"termid":"MONDO:0016406","xrefs":{"Monarch":{"xref_id":"0016406"}}}


id: PBO:0027917
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vegetative_growth_on_myriocin","termid":"PBO:0027917"}


id: MONDO:0035461
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete systemic disease with glomerulopathy as a major feature (obsolete MONDO:0035461)","secondary_identifiers":["Orphanet:567554"],"termid":"MONDO:0035461","xrefs":{"Monarch":{"xref_id":"0035461"}}}


id: PBO:0090233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-BAR domain protein Cdc15","termid":"PBO:0090233"}


id: PBO:0059146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-phase specific PLK1 interacting protein","termid":"PBO:0059146"}


id: GO:1905493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of G-quadruplex DNA binding.","definition_xrefs":["GO_REF:0000059","PMID:26503245","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of G-quadruplex DNA binding (obsolete GO:1905493)","synonyms":[{"name":"regulation of G quadruplex DNA binding","type":"exact"},{"name":"regulation of G quartet DNA binding","type":"exact"},{"name":"regulation of G quartet binding","type":"broad"},{"name":"regulation of G-DNA binding","type":"exact"},{"name":"regulation of G-quartet DNA binding","type":"exact"},{"name":"regulation of G-quartet binding","type":"broad"},{"name":"regulation of quadruplex DNA binding","type":"exact"},{"name":"regulation of tetraplex DNA binding","type":"exact"}],"termid":"GO:1905493"}


id: MONDO:0000835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ischemic bone disease (obsolete MONDO:0000835)","termid":"MONDO:0000835","xrefs":{"Monarch":{"xref_id":"0000835"}}}


id: GO:0060077
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse in which an action potential in the presynaptic cell reduces the probability of an action potential occurring in the postsynaptic cell.","definition_xrefs":["GOC:ef","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"inhibitory synapse","secondary_identifiers":["Wikipedia:Inhibitory_postsynaptic_potential"],"termid":"GO:0060077"}


id: PBO:0057891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3195","termid":"PBO:0057891"}


id: PBO:0062304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily P member 1 pseudogene","termid":"PBO:0062304"}


id: GO:0034285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disaccharide stimulus.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to carbohydrate","termid":"GO:0009743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to disaccharide","synonyms":[{"name":"response to disaccharide stimulus","type":"exact"}],"termid":"GO:0034285"}


id: GO:0090410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of malonate, the propanedioate ion.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid catabolic process","termid":"GO:0043649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"malonate catabolic process","termid":"GO:0090410"}


id: GO:0060687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of prostate gland branching, the process in which the branching structure of the prostate gland is generated and organized. A branch is a division or offshoot from a main stem.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of morphogenesis of a branching structure","termid":"GO:0060688"},{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"branching involved in prostate gland morphogenesis","termid":"GO:0060442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of branching involved in prostate gland morphogenesis","termid":"GO:0060687"}


id: MONDO:0035785
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic anorectal malformation with vestibular fistula (obsolete MONDO:0035785)","secondary_identifiers":["Orphanet:600993"],"termid":"MONDO:0035785","xrefs":{"Monarch":{"xref_id":"0035785"}}}


id: PBO:0005880
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intronic ORF","termid":"PBO:0005880"}


id: PBO:0043163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell death inducing DFFA like effector c","termid":"PBO:0043163"}


id: PBO:0041343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C3orf49 pseudogene 1","termid":"PBO:0041343"}


id: PBO:0047097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 149 member B1 pseudogene 1","termid":"PBO:0047097"}


id: PR:Q9P7L3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC21C3.10c gene.","definition_xrefs":["UniProtKB:Q9P7L3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.10c","synonyms":[{"name":"2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"2,5-diamino-6-ribitylamino-4(3H)-pyrimidinone 5'-phosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DARIPP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DAROPP reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DARP reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC21C3.10c","type":"exact"}],"termid":"PR:Q9P7L3"}


id: PBO:0062727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily B member 1 pseudogene","termid":"PBO:0062727"}


id: PBO:0032727
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cut_following_normal_mitotic_chromosome_condensation","termid":"PBO:0032727"}


id: PBO:0066404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REL divergent transcript","termid":"PBO:0066404"}


id: PBO:0090745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate S. pombe SPBC28E12.04 ortholog, syntenic position","termid":"PBO:0090745"}


id: MONDO:0006244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A biologic subset of breast carcinoma defined by high expression of HER2, GRB7, and TRAP100, and by lack of expression of estrogen receptor (ER).","definition_xrefs":["NCIT:C53556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast carcinoma by gene expression profile","termid":"MONDO:0006116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"HER2 positive breast carcinoma","secondary_identifiers":["MEDGEN:743175","DOID:0060079","SCTID:427685000","UMLS:C1960398","EFO:1000294"],"synonyms":[{"name":"ERBB2 Overexpressing subtype of breast carcinoma","type":"exact"},{"name":"HER2 Overexpressing breast carcinoma","type":"exact"},{"name":"HER2 Overexpressing subtype of breast carcinoma","type":"exact"},{"name":"HER2 Positive breast cancer","type":"exact"},{"name":"HER2 positive breast carcinoma","type":"exact"},{"name":"Her2-receptor positive breast cancer","type":"exact"}],"termid":"MONDO:0006244","xrefs":{"Monarch":{"xref_id":"0006244"}}}


