# terms

id: PBO:0025416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene, possibly truncated by rearrangement and LTR","termid":"PBO:0025416"}


id: MONDO:0014148
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Estrogen resistance syndrome is a rare, genetic endocrine disease characterized by estrogen-receptor insensitivity to estrogens and the presence of elevated estrogen and gonadotropin serum levels. Clinical manifestations include absent breast development and primary amenorrhea in association with multicystic ovaries and/or hypoplastic uterus in female patients, normal or abnormal gonadal development in male patients and markedly delayed bone maturation, persistence of open epiphyses, reduced bone mineral density, and variable tall stature in both sexes. Glucose intolerance, hyperinsulinemia and lipid abnormalities may also be present.","definition_xrefs":["Orphanet:785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"estrogen resistance syndrome","secondary_identifiers":["GARD:16548","icd11.foundation:1267163286","OMIM:615363","UMLS:C3809250","MEDGEN:815580","SCTID:724555000"],"synonyms":[{"name":"ESTRR","type":"related"},{"name":"estrogen insensitivity","type":"related"},{"name":"estrogen resistance","type":"related"},{"name":"oestrogen insensitivity","type":"related"},{"name":"oestrogen resistance","type":"related"}],"termid":"MONDO:0014148","xrefs":{"Monarch":{"xref_id":"0014148"}}}


id: PBO:0041632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACNA1C antisense RNA 2","termid":"PBO:0041632"}


id: PBO:0058093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4309","termid":"PBO:0058093"}


id: GO:0052474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of the T-cell mediated immune response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of symbiont T-cell mediated immune response (obsolete GO:0052474)","synonyms":[{"name":"negative regulation by organism of symbiont T-cell mediated immune response","type":"exact"}],"termid":"GO:0052474"}


id: MOD:00885
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by formation of an ester bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ester crosslinked residues","termid":"MOD:00885"}


id: PBO:0079725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream binding transcription factor like 1","termid":"PBO:0079725"}


id: GO:0033808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3 malonyl-CoA + 4-coumaroyl-CoA + NADPH + H+ = 4 CoA + isoliquiritigenin + 3 CO2 + NADP+ + H2O.","definition_xrefs":["EC:2.3.1.170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"6'-deoxychalcone synthase activity","secondary_identifiers":["RHEA:10584","MetaCyc:RXN-3142"],"synonyms":[{"name":"malonyl-CoA:4-coumaroyl-CoA malonyltransferase (cyclizing, reducing) activity","type":"related"}],"termid":"GO:0033808"}


id: PBO:0048198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit alpha2","termid":"PBO:0048198"}


id: MONDO:0000603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hypersensitivity reaction type II disease that involves the cardiovascular system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder","termid":"MONDO:0004995"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune disorder of cardiovascular system","secondary_identifiers":["DOID:0060051"],"synonyms":[{"name":"cardiovascular system autoimmune disease","type":"exact"},{"name":"cardiovascular system hypersensitivity reaction type II disease","type":"exact"}],"termid":"MONDO:0000603","xrefs":{"Monarch":{"xref_id":"0000603"}}}


id: MONDO:0970960
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare non-saccular limited dorsal myeloschisis histologically characterized by skin tissue with a jagged depression of squamous epithelium continued to subcutaneous mature adipose tissue with loose connective tissue. GFAP-immunopositive glial cells are embedded in the subcutaneous lipoma. The extradural and intradural stalk have cord-like fibrocollagenous tissue containing adipose tissue, peripheral nerve fibers, clusters of melanocytes, and skeletal muscle fibers.","definition_xrefs":["Orphanet:645300"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-saccular limited dorsal myeloschisis","termid":"MONDO:0968989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lipomatous non-saccular limited dorsal myeloschisis","secondary_identifiers":["UMLS:C5816723","MEDGEN:1853134"],"termid":"MONDO:0970960","xrefs":{"Monarch":{"xref_id":"0970960"}}}


id: MONDO:0022918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disease that has its basis in the disruption of cytokine activity.","definition_xrefs":["MONDO:patterns/basis_in_disruption_of_process"],"gene_count":0,"genotype_count":0,"name":"obsolete cytokine deficiency (obsolete MONDO:0022918)","synonyms":[{"name":"cytokine activity disease","type":"exact"},{"name":"disorder of cytokine activity","type":"exact"}],"termid":"MONDO:0022918","xrefs":{"Monarch":{"xref_id":"0022918"}}}


id: PBO:0054025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1356","termid":"PBO:0054025"}


id: GO:0001616
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with ghrelin to initiate a change in cell activity.","definition_xrefs":["GOC:mah","PMID:17983853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"growth hormone secretagogue receptor activity","synonyms":[{"name":"ghrelin receptor activity","type":"exact"}],"termid":"GO:0001616"}


id: PBO:0109915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylosome subunit pICln, Saf5","termid":"PBO:0109915"}


id: MONDO:0018408
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"echinococcus granulosus infectious disease","termid":"MONDO:0044346"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystic echinococcosis","secondary_identifiers":["SCTID:721822004","UMLS:C4553297","MedDRA:10014096","GARD:2764","Orphanet:400","ICD9:122.4","MEDGEN:1639841","DOID:1495"],"synonyms":[{"name":"Echinococcus granulosus infection","type":"exact"},{"name":"Echinococcus granulosus infection of lung","type":"exact"},{"name":"Echinococcus granulosus infection of thyroid","type":"exact"},{"name":"Echinococcus granulosus infectious disease of liver","type":"exact"},{"name":"Hydatidosis","type":"exact"},{"name":"echinococcus granulosus","type":"exact"},{"name":"echinococcus granulosus infectious disease of liver","type":"exact"},{"name":"echinococcus granulosus infectious disease of thyroid","type":"exact"},{"name":"hydatid disease","type":"exact"},{"name":"liver echinococcus granulosus","type":"exact"},{"name":"lung echinococcus granulosus","type":"exact"},{"name":"thyroid echinococcus granulosus","type":"exact"},{"name":"unilocular echinococcosis","type":"exact"},{"name":"unilocular hydatid disease","type":"exact"}],"termid":"MONDO:0018408","xrefs":{"Monarch":{"xref_id":"0018408"}}}


id: PBO:0091384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi Ca(2+)/H(+) antiporter Gdt2","termid":"PBO:0091384"}


id: GO:0098781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transcription of non (protein) coding RNA from a DNA template.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete ncRNA transcription (obsolete GO:0098781)","termid":"GO:0098781"}


id: PBO:0054729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2138","termid":"PBO:0054729"}


id: PBO:0043066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor muscarinic 2","termid":"PBO:0043066"}


id: PBO:0055138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2557","termid":"PBO:0055138"}


id: PBO:0041639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel subunit alpha1 F","termid":"PBO:0041639"}


id: FYPO:0001562
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-histidine measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular histidine level","secondary_identifiers":["FYPO:0001620"],"synonyms":[{"name":"decreased cellular L-histidine level","type":"exact"},{"name":"decreased cellular histidine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular histidine level during vegetative growth","type":"exact"},{"name":"decreased histidine accumulation","type":"related"},{"name":"reduced cellular histidine level","type":"exact"}],"termid":"FYPO:0001562"}


id: PBO:0033817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional activator Sak1","termid":"PBO:0033817"}


id: PBO:0042974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHD1 divergent transcript","termid":"PBO:0042974"}


id: MONDO:0013841
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"stutter disorder","termid":"MONDO:0000723"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stuttering, familial persistent, 3","secondary_identifiers":["MEDGEN:766295","UMLS:C3553381","OMIM:614655"],"synonyms":[{"name":"STUT3","type":"exact"},{"name":"stuttering, familial persistent, 3","type":"exact"}],"termid":"MONDO:0013841","xrefs":{"Monarch":{"xref_id":"0013841"}}}


id: GO:0030196
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: formamide = H2O + hydrogen cyanide.","definition_xrefs":["EC:4.2.1.66","RHEA:21720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cyanide hydratase activity","secondary_identifiers":["KEGG_REACTION:R01408","MetaCyc:CYANIDE-HYDRATASE-RXN"],"synonyms":[{"name":"formamide dehydratase activity","type":"related"},{"name":"formamide hydro-lyase (cyanide-forming)","type":"related"},{"name":"formamide hydro-lyase activity","type":"related"}],"termid":"GO:0030196"}


id: PBO:0074952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 113-3","termid":"PBO:0074952"}


id: PBO:0039144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 2 pseudogene 1","termid":"PBO:0039144"}


id: PBO:0041927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromobox 1 pseudogene 2","termid":"PBO:0041927"}


id: PBO:0004910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome assembly protein (predicted)","termid":"PBO:0004910"}


id: MONDO:0100275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disorder of plasmalogen biosynthesis in which the cause of the disease is a mutation in the FAR1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of plasmalogens biosynthesis","termid":"MONDO:0017986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0019053","MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"fatty acyl-CoA reductase defects","synonyms":[{"name":"FAR1 defect","type":"exact"},{"name":"fatty acyl-CoA reductase defects","type":"exact"}],"termid":"MONDO:0100275","xrefs":{"Monarch":{"xref_id":"0100275"}}}


id: MONDO:0021149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disease characteristic","termid":"MONDO:0021125"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary vs non-hereditary etiology","termid":"MONDO:0021149","xrefs":{"Monarch":{"xref_id":"0021149"}}}


id: PBO:0071417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 23","termid":"PBO:0071417"}


id: PBO:0048282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GALNT16 and EXD2 antisense RNA 1","termid":"PBO:0048282"}


id: GO:0090309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate, frequency, or extent of DNA methylation-dependent heterochromatin formation.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of DNA methylation-dependent heterochromatin formation (obsolete GO:0090309)","synonyms":[{"name":"positive regulation of DNA methylation-dependent heterochromatin assembly","type":"exact"},{"name":"positive regulation of methylation-dependent chromatin silencing","type":"broad"}],"termid":"GO:0090309"}


id: GO:0036048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a succinyl group (CO-CH2-CH2-CO) from a residue in a peptide or protein.","definition_xrefs":["GOC:sp","PMID:22076378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deacylation","termid":"GO:0035601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein desuccinylation","termid":"GO:0036048"}


id: GO:0018812
data:
  {"annotated_genes":["SJAG_01300"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102158"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-hydroxy-fatty acyl-CoA = a (2E)-enoyl-CoA + H2O.","definition_xrefs":["RHEA:33767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enoyl-CoA hydratase activity","termid":"GO:0004300"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01300":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydratase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["Reactome:R-HSA-2066778","Reactome:R-HSA-5676637","Reactome:R-HSA-6809263","Reactome:R-HSA-8957389","Reactome:R-HSA-390252","Reactome:R-HSA-389986","Reactome:R-HSA-2066780"],"termid":"GO:0018812","terms_by_termid":{"GO:0102158":null}}


id: PBO:0031416
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell-substrate_adhesion","termid":"PBO:0031416"}


id: MONDO:0019958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete insulinoma (obsolete MONDO:0019958)","termid":"MONDO:0019958","xrefs":{"Monarch":{"xref_id":"0019958"}}}


id: GO:1990275
data:
  {"annotated_genes":["SJAG_04599"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72700],"is_not":false,"summary":null,"term":"GO:1990275"}]},"cv_name":"molecular_function","definition":"Binding to a preribosome.","definition_xrefs":["GOC:di","PMID:22735702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex binding","termid":"GO:0043021"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04599":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"preribosome binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:1990275","terms_by_termid":{"GO:1990275":null}}


id: MONDO:0000846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete craniodiaphyseal dysplasia (obsolete MONDO:0000846)","termid":"MONDO:0000846","xrefs":{"Monarch":{"xref_id":"0000846"}}}


id: MOD:00674
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a carboxyl group with a carboxamido group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidated residue","termid":"MOD:00674"}


id: MONDO:0023175
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fontaine farriaux blanckaert syndrome","secondary_identifiers":["GARD:2358"],"termid":"MONDO:0023175","xrefs":{"Monarch":{"xref_id":"0023175"}}}


id: PBO:0114352
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metazoa do not have tef3 due to differenees in the translation machinery","termid":"PBO:0114352"}


id: MOD:00646
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to either N-acetyl-L-cysteine or S-acetyl-L-cysteine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylated residue","termid":"MOD:00394"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"acetylated L-cysteine","synonyms":[{"name":"AcCys","type":"exact"}],"termid":"MOD:00646"}


id: PBO:0076964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGFB induced factor homeobox 1 pseudogene 1","termid":"PBO:0076964"}


id: PBO:0120111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic protein involved in the regulation of phospholipid metabolism; one of 6 proteins (Ist2p, Scs2p, Scs22p, Tcb1p, Tcb2p, Tcb3p) that connect the ER and plasma membrane (PM); regulates PI4P levels by controlling access of Sac1p to PM substrate PI4P; VAMP-associated protein (VAP) homolog; role in NVJ integrity and micronucleophagy; SCS22 has a paralog, SCS2, that arose from the whole genome duplication","termid":"PBO:0120111"}


id: MONDO:0032600
data:
  {"annotated_genes":["SJAG_03982"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88017],"is_not":false,"summary":null,"term":"MONDO:0032600"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03982":null},"genotype_count":0,"is_obsolete":false,"name":"Snijders Blok-Campeau syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4748701","MEDGEN:1648495","Orphanet:599082","OMIM:618205","GARD:13806"],"synonyms":[{"name":"CHD3-related developmental delay-speech delay-intellectual disability-abnormalities of vision-facial dysmorphism syndrome","type":"exact"},{"name":"SNIBCPS","type":"related"},{"name":"SNIJDERS BLOK-CAMPEAU SYNDROME","type":"related"},{"name":"intellectual developmental disorder with macrocephaly, speech delay, and dysmorphic facies","type":"exact"}],"termid":"MONDO:0032600","terms_by_termid":{"MONDO:0032600":null},"xrefs":{"Monarch":{"xref_id":"0032600"}}}


id: PBO:0113206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial DNA-binding and packaging factor; mtDNA maintenance factor involved in mitochondrial DNA replication and recombination, regulating mtDNA copy number in opposition to DPI34; HMG1 DNA-binding protein family member containing two HMG-boxes; activity may be regulated by protein kinase A phosphorylation; ABF2 has a paralog, IXR1, that arose from the whole genome duplication; human homolog TFAM can complement yeast abf2 mutant, rescuing the loss-of-mitochondrial DNA phenotype","termid":"PBO:0113206"}


id: GO:0030053
data:
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id: GO:0002138
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id: GO:0051276
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id: PBO:0084458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannosyltransferase, involved in N-linked glycosylation; catalyzes the transfer of both the seventh mannose residue on B-arm and ninth mannose residue on the C-arm from Dol-P-Man to lipid-linked oligosaccharides; human homolog ALG9 can complement yeast null mutant; mutation of human homolog causes type 1 congenital disorders of glycosylation","termid":"PBO:0084458"}


id: PR:Q12126
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell division protein kinase 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase crk1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F8.07","secondary_identifiers":["UniProtKB:Q12126"],"synonyms":[{"name":"Spom972h-CDK7","type":"exact"},{"name":"mitotic catastrophe suppressor 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q12126"}


id: PBO:0051446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-32 (non-functional)","termid":"PBO:0051446"}


id: PBO:0091248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,3-galactosyltransferase Otg1","termid":"PBO:0091248"}


id: GO:0046485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ether lipids, lipids that contain (normally) one lipid alcohol in ether linkage to one of the carbon atoms (normally C-1) of glycerol.","definition_xrefs":["PMID:15337120","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid metabolic process","termid":"GO:0006629"},{"relation_name":"is_a","term_name":"glycerol ether metabolic process","termid":"GO:0006662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ether lipid metabolic process","secondary_identifiers":["Wikipedia:Ether_lipid"],"synonyms":[{"name":"ether lipid metabolism","type":"exact"},{"name":"plasmalogen metabolic process","type":"narrow"}],"termid":"GO:0046485"}


id: PBO:0071759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P1 pseudogene 6","termid":"PBO:0071759"}


id: PBO:0017019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase, human DHX29 ortholog (predicted)","termid":"PBO:0017019"}


id: GO:2001279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of unsaturated fatty acid biosynthetic process.","definition_xrefs":["GO:0006636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid biosynthetic process","termid":"GO:0042304"},{"relation_name":"regulates","term_name":"unsaturated fatty acid biosynthetic process","termid":"GO:0006636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of unsaturated fatty acid biosynthetic process","synonyms":[{"name":"regulation of fatty acid desaturation","type":"related"},{"name":"regulation of polyunsaturated fatty acid biosynthesis","type":"related"},{"name":"regulation of unsaturated fatty acid anabolism","type":"exact"},{"name":"regulation of unsaturated fatty acid biosynthesis","type":"exact"},{"name":"regulation of unsaturated fatty acid formation","type":"exact"},{"name":"regulation of unsaturated fatty acid synthesis","type":"exact"}],"termid":"GO:2001279"}


id: PBO:0083471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene PRY2","termid":"PBO:0083471"}


id: GO:0090042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an acetyl group from tubulin. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deacetylation","termid":"GO:0006476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tubulin deacetylation","termid":"GO:0090042"}


id: GO:1990433
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A DNA-binding transcription factor complex consisting of CSL and mastermind proteins in complex with the cleaved, intracellular domain of Notch. It is required for both repression and activation of Notch target genes.","definition_xrefs":["GOC:bhm","GOC:dos","PMID:16530045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"CSL-Notch-Mastermind transcription factor complex","synonyms":[{"name":"CSL-NotchIC-MASTERMIND complex","type":"exact"}],"termid":"GO:1990433"}


id: MONDO:0009349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The most severe form of holoprosencephaly in which there is a complete absence of midline forebrain division resulting in the presence of fused hemispheres and a single ventricle (alobar holoprosencephaly). It is mapped to chromosome 21q22.","definition_xrefs":["NCIT:C75476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"holoprosencephaly","termid":"MONDO:0016296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"holoprosencephaly 1","secondary_identifiers":["DOID:0110881","UMLS:C0266667","MEDGEN:78617","OMIM:236100"],"synonyms":[{"name":"Demyer sequence","type":"related"},{"name":"HPE1","type":"exact"},{"name":"Hpe, familial","type":"broad"},{"name":"arhinencephaly","type":"related"},{"name":"cyclopia","type":"broad"},{"name":"holoprosencephaly 1","type":"exact"},{"name":"holoprosencephaly 1, isolated cases","type":"exact"},{"name":"holoprosencephaly type 1","type":"exact"},{"name":"holoprosencephaly, familial Alobar","type":"related"},{"name":"isolated arhinencephaly","type":"related"}],"termid":"MONDO:0009349","xrefs":{"Monarch":{"xref_id":"0009349"}}}


id: PBO:0041651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit beta 1","termid":"PBO:0041651"}


id: MONDO:0000422
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inborn glycogen metabolism disorder (obsolete MONDO:0000422)","termid":"MONDO:0000422","xrefs":{"Monarch":{"xref_id":"0000422"}}}


id: PBO:0074788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 9","termid":"PBO:0074788"}


id: PBO:0036300
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital sideroblastic anemia","termid":"PBO:0036300"}


id: GO:0051613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of serotonin into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neurotransmitter uptake","termid":"GO:0051582"},{"relation_name":"is_a","term_name":"regulation of serotonin uptake","termid":"GO:0051611"},{"relation_name":"positively_regulates","term_name":"serotonin uptake","termid":"GO:0051610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of serotonin uptake","synonyms":[{"name":"activation of serotonin uptake","type":"narrow"},{"name":"positive regulation of 5-HT uptake","type":"exact"},{"name":"positive regulation of 5-hydroxytryptamine uptake","type":"exact"},{"name":"positive regulation of 5HT uptake","type":"exact"},{"name":"positive regulation of serotonin import","type":"exact"},{"name":"stimulation of serotonin uptake","type":"narrow"},{"name":"up regulation of serotonin uptake","type":"exact"},{"name":"up-regulation of serotonin uptake","type":"exact"},{"name":"upregulation of serotonin uptake","type":"exact"}],"termid":"GO:0051613"}


id: GO:1902051
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to (25S)-Delta(4)-dafachronate.","definition_xrefs":["PMID:16529801","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"steroid hormone binding","termid":"GO:1990239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0008289","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"(25S)-Delta(4)-dafachronate binding","termid":"GO:1902051"}


id: FYPO:0005959
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a spindle forms with microtubules emanating from three or more poles.","definition_xrefs":["PMID:15992541","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle morphology","termid":"FYPO:0003607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000120"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000120","FYPO:0000054","FYPO:0000002","FYPO:0005447","FYPO:0002399"],"is_obsolete":false,"name":"multipolar spindle","termid":"FYPO:0005959"}


id: MONDO:0004690
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer involving a tonsillar fossa.","definition_xrefs":["MONDO:patterns/cancer"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tonsil cancer","termid":"MONDO:0006998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"tonsillar fossa cancer","secondary_identifiers":["DOID:8969","ICD9:146.1","ICD10CM:C09.0","MEDGEN:509269","SCTID:363394001","UMLS:C0153384"],"synonyms":[{"name":"cancer of tonsillar fossa","type":"exact"},{"name":"malignant neoplasm of tonsillar fossa","type":"exact"},{"name":"malignant tonsillar fossa neoplasm","type":"exact"},{"name":"malignant tumor of tonsillar fossa","type":"exact"},{"name":"malignant tumour of tonsillar fossa","type":"exact"},{"name":"tonsillar fossa cancer","type":"exact"}],"termid":"MONDO:0004690","xrefs":{"Monarch":{"xref_id":"0004690"}}}


id: PBO:0003632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Fcf1 (predicted)","termid":"PBO:0003632"}


id: GO:0047687
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-ascorbate + H2O + O2 = L-threonate + 2 H+ + oxalate.","definition_xrefs":["EC:1.13.11.13"],"gene_count":0,"genotype_count":0,"name":"obsolete ascorbate 2,3-dioxygenase activity (obsolete GO:0047687)","synonyms":[{"name":"AAoxygenase activity","type":"exact"},{"name":"ascorbate 2,3-dioxygenase activity","type":"exact"},{"name":"ascorbate:oxygen 2,3-oxidoreductase (bond-cleaving)","type":"exact"}],"termid":"GO:0047687"}


id: PBO:0003624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ATP-dependent RNA helicase Mss116 (predicted)","termid":"PBO:0003624"}


id: GO:0052823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2Z,4E,7E)-2-hydroxy-6-oxonona-2,4,7-trienedioate + H2O = (2Z)-2-hydroxypenta-2,4-dienoate + fumarate + H+.","definition_xrefs":["RHEA:34191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"2-hydroxy-6-oxonona-2,4,7-trienedioate hydrolase activity","secondary_identifiers":["MetaCyc:RXN-12070","KEGG_REACTION:R06789","UM-BBD_reactionID:r1622"],"synonyms":[{"name":"(2E,4Z,7E)-2-hydroxy-6-oxonona-2,4,7-trienedioate fumarylhydrolase activity","type":"exact"},{"name":"2-hydroxy-6-ketonona-2,4,7-trienedoic acid hydrolase activity","type":"exact"}],"termid":"GO:0052823"}


id: MONDO:0006753
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of gram-negative meningitis that tends to occur in neonates, in association with anatomical abnormalities (which feature communication between the meninges and cutaneous structures) or as opportunistic infections in association with immunologic deficiency syndromes. In premature neonates the clinical presentation may be limited to anorexia; vomiting; lethargy; or respiratory distress. Full-term infants may have as additional features fever; seizures; and bulging of the anterior fontanelle. (From Menkes, Textbook of Child Neurology, 5th ed, pp398-400)","definition_xrefs":["MESH:D020814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial meningitis","termid":"MONDO:0006670"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Escherichia coli meningitis","secondary_identifiers":["ICD9:320.82","UMLS:C0338395","MEDGEN:90920","EFO:1000929","ICD9:320.7","SCTID:192655005"],"termid":"MONDO:0006753","xrefs":{"Monarch":{"xref_id":"0006753"}}}


id: PR:O94706
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription initiation factor TFIID subunit 8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23307:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID subunit 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.06","secondary_identifiers":["UniProtKB:O94706"],"synonyms":[{"name":"SPCC1259.06","type":"related"},{"name":"Spom972h-TAF8","type":"exact"},{"name":"TBP-associated factor 8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94706"}


id: PBO:0048695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLIS family zinc finger 3","termid":"PBO:0048695"}


id: PBO:0004639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase Swf1 (predicted)","termid":"PBO:0004639"}


id: PBO:0085686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in recovery from arrest in response to pheromone; acts in a cell cycle arrest recovery pathway independent from Far1p; interacts with Far3p, Far7p, Far9p, Far10p, and Far11p","termid":"PBO:0085686"}


id: GO:0007454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures derived from the labial disc are generated and organized. This includes the transformation of a labial imaginal disc from a monolayered epithelium in the larvae of holometabolous insects into recognizable adult structures including parts of the proboscis.","definition_xrefs":["GOC:bf","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc morphogenesis","termid":"GO:0007560"},{"relation_name":"part_of","term_name":"labial disc development","termid":"GO:0035217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"labial disc morphogenesis","synonyms":[{"name":"labial disc metamorphosis","type":"exact"}],"termid":"GO:0007454"}


id: GO:0160139
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine(2605) in 23S rRNA = pseudouridine(2605) in 23S rRNA.","definition_xrefs":["RHEA:42520","EC:5.4.99.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA pseudouridine synthase activity","termid":"GO:0120159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853","GO:0140098"],"is_obsolete":false,"name":"23S rRNA pseudouridine(2605) synthase activity","termid":"GO:0160139"}


id: GO:0110112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate, or extent of lipid transporter activity.","definition_xrefs":["PMID:27365390","GOC:BHF_miRNA","GOC:BHF","GOC:rph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of lipid transporter activity (obsolete GO:0110112)","termid":"GO:0110112"}


id: PBO:0109912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 29","termid":"PBO:0109912"}


id: GO:0052542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which callose is transported to, and/or maintained in, a specific location during the defense response. Callose is a linear 1,3-beta-d-glucan formed from UDP-glucose and is found in certain plant cell walls.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response","termid":"GO:0006952"},{"relation_name":"is_a","term_name":"response to carbohydrate","termid":"GO:0009743"},{"relation_name":"is_a","term_name":"callose localization","termid":"GO:0052545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"defense response by callose deposition","synonyms":[{"name":"callose deposition during defense response","type":"related"},{"name":"callose localization during defense response","type":"related"}],"termid":"GO:0052542"}


id: PBO:0045853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 43","termid":"PBO:0045853"}


id: MONDO:0009363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hydrocephaly-tall stature-joint laxity syndrome is a multiple congenital anomalies syndrome described in two sisters and characterized by the presence of hydrocephalus (onset in infancy), tall stature, joint laxity, and thoracolumbar kyphosis. There have been no further descriptions in the literature since 1989.","definition_xrefs":["Orphanet:2181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrocephaly-tall stature-joint laxity syndrome","secondary_identifiers":["SCTID:732926009","GARD:1666","MEDGEN:383828","UMLS:C1856051","MESH:C535770","OMIM:236660"],"synonyms":[{"name":"Daish Hardman Lamont syndrome","type":"related"},{"name":"Daish-Hardman-Lamont syndrome","type":"exact"},{"name":"hydrocephalus, tall stature, JOINT laxity, and kyphoscoliosis","type":"related"},{"name":"hydrocephalus, tall stature, joint laxity and kyphoscoliosis","type":"related"},{"name":"hydrocephaly - tall stature - joint laxity","type":"related"}],"termid":"MONDO:0009363","xrefs":{"Monarch":{"xref_id":"0009363"}}}


id: PATO:0000574
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A length quality which is relatively small.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"length","termid":"PATO:0000122"},{"relation_name":"is_a","term_name":"decreased size","termid":"PATO:0000587"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased length","synonyms":[{"name":"short","type":"exact"},{"name":"shortened","type":"related"},{"name":"stubby","type":"related"}],"termid":"PATO:0000574"}


id: PBO:0086213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that binds to cruciform DNA structures; CRP1 has a paralog, MDG1, that arose from the whole genome duplication","termid":"PBO:0086213"}


id: MONDO:0019512
data:
  {"annotated_genes":["SJAG_02730"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0016581"},{"annotations":[88393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008542"}]},"cv_name":"mondo","definition":"A disease that has its basis in the disruption of heart development.","definition_xrefs":["MONDO:patterns/basis_in_disruption_of_process"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of cardiovascular system","termid":"MONDO:0024239"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02730":null},"genotype_count":0,"is_obsolete":false,"name":"congenital heart malformation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1680993","UMLS:C3649636","EFO:0005269","Orphanet:88991"],"synonyms":[{"name":"congenital heart malformation","type":"exact"},{"name":"congenital non-syndromic heart malformation","type":"related"},{"name":"disorder of heart development","type":"exact"},{"name":"heart development disease","type":"exact"},{"name":"rare congenital non-syndromic heart malformation","type":"related"}],"termid":"MONDO:0019512","terms_by_termid":{"MONDO:0008542":null,"MONDO:0016581":null},"xrefs":{"Monarch":{"xref_id":"0019512"}}}


id: PBO:0081286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 70 pseudogene 1","termid":"PBO:0081286"}


id: PBO:0047857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, 5-azacytidine type, common, fra(1)(q12)","termid":"PBO:0047857"}


id: GO:0046399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glucuronate, the anion of glucuronic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronate metabolic process","termid":"GO:0019585"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glucuronate biosynthetic process","synonyms":[{"name":"glucuronate anabolism","type":"exact"},{"name":"glucuronate biosynthesis","type":"exact"},{"name":"glucuronate formation","type":"exact"},{"name":"glucuronate synthesis","type":"exact"}],"termid":"GO:0046399"}


id: MONDO:0958325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited thrombocytopenia","termid":"MONDO:0100241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombocytopenia 12 with or without myopathy","secondary_identifiers":["OMIM:620757","UMLS:C5935593","MEDGEN:1861803"],"termid":"MONDO:0958325","xrefs":{"Monarch":{"xref_id":"0958325"}}}


id: PBO:0031136
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_interphase_microtubule_nucleation","termid":"PBO:0031136"}


id: PBO:0086124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for flavinylation of Sdh1p; binds to Sdh1p and promotes FAD cofactor attachment, which is necessary for succinate dehydrogenase (SDH) complex assembly and activity; mutations in human ortholog PGL2 are associated with neuroendocrine tumors (paraganglioma)","termid":"PBO:0086124"}


id: PR:P87227
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A centromere protein I that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00370","PANTHER:PTHR15408:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner centromere protein mis6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.20c","secondary_identifiers":["UniProtKB:P87227"],"synonyms":[{"name":"Spom972h-CENPI","type":"exact"},{"name":"sim4 complex subunit mis6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87227"}


id: GO:0070734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of one or more methyl groups to lysine at position 27 of the histone.","definition_xrefs":["GOC:mah","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K27 methylation (obsolete GO:0070734)","synonyms":[{"name":"histone H3 K27 methylation","type":"exact"},{"name":"histone H3K27me","type":"exact"},{"name":"histone lysine H3 K27 methylation","type":"exact"}],"termid":"GO:0070734"}


id: MONDO:0024276
data:
  {"annotated_genes":["SJAG_03677","SJAG_00440","SJAG_01970","SJAG_04067","SJAG_01144","SJAG_03787","SJAG_02231","SJAG_03453","SJAG_01151","SJAG_02049"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"},{"annotations":[88434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007256"},{"annotations":[87947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0003789"},{"annotations":[88575,88573,88574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007763"},{"annotations":[87662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012004"},{"annotations":[89115,89116,87639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008566"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial neoplasm","termid":"MONDO:0005626"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00440":null,"SJAG_01144":null,"SJAG_01151":null,"SJAG_01970":null,"SJAG_02049":null,"SJAG_02231":null,"SJAG_03453":null,"SJAG_03677":null,"SJAG_03787":null,"SJAG_04067":null},"genotype_count":0,"is_obsolete":false,"name":"glandular cell neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0205854","NCIT:C7132","HP:0031493","MEDGEN:64458"],"synonyms":[{"name":"glandular cell epithelial neoplasm","type":"exact"},{"name":"glandular cell epithelium neoplasm","type":"exact"},{"name":"glandular cell neoplasm","type":"exact"},{"name":"glandular cell tumor","type":"exact"},{"name":"glandular cell tumour","type":"exact"}],"termid":"MONDO:0024276","terms_by_termid":{"MONDO:0003789":null,"MONDO:0007256":null,"MONDO:0007763":null,"MONDO:0008566":null,"MONDO:0012004":null,"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0024276"}}}


id: GO:1990063
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. In E. coli it is composed of BamABCDE, of the outer membrane protein BamA, and four lipoproteins BamB, BamC, BamD and BamE. BamA interacts directly with BamB and the BamCDE subcomplex.","definition_xrefs":["GOC:bhm","PMID:20378773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"periplasmic side of cell outer membrane","termid":"GO:0031241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Bam protein complex","synonyms":[{"name":"OMP complex","type":"exact"}],"termid":"GO:1990063"}


id: PBO:0050985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 57","termid":"PBO:0050985"}


id: PBO:0041155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 pseudogene 10","termid":"PBO:0041155"}


id: GO:0018627
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-aminobenzenesulfonate + 2 H+ + NADH + O2 = 2,3-dihydroxybenzenesulfonate + NAD+ + NH4. 2,3-dihydroxybenzenesulfonate is also known as 3-sulfocatechol.","definition_xrefs":["RHEA:23468","EC:1.14.12.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2-aminobenzenesulfonate 2,3-dioxygenase activity","secondary_identifiers":["GO:0018605","MetaCyc:2ASDOSALCAL-RXN","UM-BBD_reactionID:r0218","KEGG_REACTION:R05156"],"synonyms":[{"name":"2-aminobenzenesulfonate dioxygenase activity","type":"exact"},{"name":"2-aminobenzenesulfonate,NADH:oxygen oxidoreductase (2,3-hydroxylating, ammonia-forming)","type":"related"},{"name":"2-aminobenzenesulphonate 2,3-dioxygenase activity","type":"exact"},{"name":"2-aminobenzenesulphonate dioxygenase activity","type":"exact"},{"name":"2-aminosulfobenzene 2,3-dioxygenase activity","type":"related"}],"termid":"GO:0018627"}


id: PBO:0080004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP12 antisense RNA 1","termid":"PBO:0080004"}


id: GO:0047104
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CoA + NAD+ + palmitaldehyde = H+ + NADH + palmitoyl-CoA.","definition_xrefs":["RHEA:19705","EC:1.2.1.42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty aldehyde dehydrogenase (NAD+) activity","termid":"GO:0050061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"hexadecanal dehydrogenase (acylating) activity","secondary_identifiers":["KEGG_REACTION:R01277","MetaCyc:1.2.1.42-RXN","UM-BBD_reactionID:r1374"],"synonyms":[{"name":"fatty acyl-CoA reductase activity","type":"broad"},{"name":"hexadecanal:NAD+ oxidoreductase (CoA-acylating)","type":"related"}],"termid":"GO:0047104"}


id: SO:0001200
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A negative_sense_RNA_viral_sequence is a ss_RNA_viral_sequence that is the sequence of a single stranded RNA virus that is complementary to mRNA and must be converted to positive sense RNA by RNA polymerase before translation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ss_RNA_viral_sequence","termid":"SO:0001199"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative_sense_ssRNA_viral_sequence","synonyms":[{"name":"negative sense single stranded RNA virus","type":"related"},{"name":"negative sense ssRNA viral sequence","type":"exact"}],"termid":"SO:0001200"}


id: PBO:0078658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 11-1","termid":"PBO:0078658"}


id: MONDO:0017251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pulmonary airway malformation","termid":"MONDO:0016580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital pulmonary airway malformation type 3","secondary_identifiers":["GARD:21096","icd11.foundation:1342201768","Orphanet:280847","MEDGEN:1741544","UMLS:C5437762"],"synonyms":[{"name":"CCAM type 3","type":"exact"},{"name":"CPAM type 3","type":"exact"},{"name":"congenital cystic adenomatoid malformation of the lung type 3","type":"exact"},{"name":"congenital cystic adenomatous malformation of the lung type 3","type":"exact"},{"name":"congenital cystic disease of the lung type 3","type":"exact"}],"termid":"MONDO:0017251","xrefs":{"Monarch":{"xref_id":"0017251"}}}


id: PBO:0046941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 66 member C","termid":"PBO:0046941"}


id: GO:0014742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of muscle hypertrophy.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle hypertrophy","termid":"GO:0014743"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"muscle hypertrophy","termid":"GO:0014896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of muscle hypertrophy","termid":"GO:0014742"}


id: PBO:0076719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor like 5","termid":"PBO:0076719"}


id: PBO:0074124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 30 member 7","termid":"PBO:0074124"}


id: PBO:0089793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATOR1-SEACIT GTPase complex subunit Npr2","termid":"PBO:0089793"}


id: PBO:0015680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF4E, 4F complex E subunit isoform 2, stress response factor","termid":"PBO:0015680"}


id: PBO:0114317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional coactivator for ribosomal proteins via TOR signaling pathway Crf1Ifh1","termid":"PBO:0114317"}


id: PBO:0040589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain and CNC homolog 1","termid":"PBO:0040589"}


id: MONDO:0016468
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aform of botulism (see this term), a rare acquired neuromuscular junction disease, characterized by descending flaccid paralysis caused by botulinum neurotoxins (BoNTs), produced in vivo leading to toxin-mediated infection. Infectious botulism includes wound botulism and intestinal toxemia botulism (infant botulism and adult intestinal botulism).","definition_xrefs":["Orphanet:230800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"botulism","termid":"MONDO:0005498"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toxin-mediated infectious botulism","secondary_identifiers":["icd11.foundation:1373611689","MEDGEN:1842703","UMLS:C5679843","GARD:20597"],"synonyms":[{"name":"toxin-mediated infective botulism","type":"exact"}],"termid":"MONDO:0016468","xrefs":{"Monarch":{"xref_id":"0016468"}}}


id: GO:0007245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Upregulation of MAPKKK activity in the context of transduction of mating pheromone signal, as described for Saccharomyces.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKKK (mating sensu Saccharomyces) (obsolete GO:0007245)","synonyms":[{"name":"activation of MAPKKK (mating sensu Saccharomyces)","type":"exact"}],"termid":"GO:0007245"}


id: GO:0044758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts synaptic transmission, the communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse, in its host organism.","definition_xrefs":["GOC:jl","PMID:31075318","PMID:26487282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host synaptic transmission","synonyms":[{"name":"modulation by symbiont of host synaptic transmission","type":"exact"},{"name":"regulation by symbiont of host synaptic transmission","type":"exact"}],"termid":"GO:0044758"}


id: PBO:0001294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial cytochrome c-heme linkage protein Cyc2 (predicted)","termid":"PBO:0001294"}


id: GO:0001027
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an RNA polymerase III (Pol III) complex, typically composed of seventeen subunits, and with another protein, macromolecule, or complex, permitting those molecules to function in a coordinated way. Once recruited to an RNA polymerase III type 1 promoter by TFIIIA-type and TFIIIC-type factors, binds to DNA, recruits RNA polymerase III and facilitates the transition from the closed to the open complex.","definition_xrefs":["PMID:12381659","GOC:txnOH-2018"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase III type 1 promoter TFIIIB-type transcription factor activity (obsolete GO:0001027)","synonyms":[{"name":"RNA polymerase III type 1 promoter polymerase recruiting transcription factor activity","type":"related"}],"termid":"GO:0001027"}


id: MONDO:0020526
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute megakaryoblastic leukemia","termid":"MONDO:0018872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"acute megakaryoblastic leukemia in down syndrome","secondary_identifiers":["MEDGEN:1863778","Orphanet:99887","UMLS:C5925108","GARD:19697"],"synonyms":[{"name":"DS-AMKL","type":"exact"}],"termid":"MONDO:0020526","xrefs":{"Monarch":{"xref_id":"0020526"}}}


id: PBO:0054721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2130","termid":"PBO:0054721"}


id: PBO:0091755
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human ELL","termid":"PBO:0091755"}


id: MONDO:0003510
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant tumor predominantly affecting young men and often associated with cryptorchidism. Seminoma is the most frequently seen malignant testicular germ cell tumor, followed by embryonal carcinoma and yolk sac tumor.","definition_xrefs":["NCIT:C9063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular cancer","termid":"MONDO:0005447"},{"relation_name":"is_a","term_name":"malignant germ cell tumor","termid":"MONDO:0006290"},{"relation_name":"is_a","term_name":"testicular germ cell tumor","termid":"MONDO:0010108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant testicular germ cell tumor","secondary_identifiers":["UMLS:C0855197","MEDGEN:163616","ICD9:186.9","DOID:5556","SCTID:713646001"],"synonyms":[{"name":"malignant germ cell neoplasm of testis","type":"exact"},{"name":"malignant germ cell neoplasm of the testis","type":"exact"},{"name":"malignant germ cell tumor of testis","type":"exact"},{"name":"malignant germ cell tumor of the testis","type":"exact"},{"name":"malignant germ cell tumour of testis","type":"exact"},{"name":"malignant germ cell tumour of the testis","type":"exact"},{"name":"malignant testicular germ cell neoplasm","type":"exact"},{"name":"malignant testicular germ cell tumor","type":"exact"},{"name":"testicular ca. (no germ/tropho.)","type":"exact"},{"name":"testicular cancer","type":"broad"},{"name":"testicular cancer (excluding germ cell or trophoblastic cancer)","type":"exact"},{"name":"testicular germ cell cancer","type":"exact"},{"name":"testicular malignant germ cell cancer","type":"related"}],"termid":"MONDO:0003510","xrefs":{"Monarch":{"xref_id":"0003510"}}}


id: FYPO:0002593
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone phosphorylation occurs to a lower extent than normal. All histone phosphorylation may be affected, or phosphorylation of specific sites on specific histones may be decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone phosphorylation during vegetative growth","termid":"FYPO:0002591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased histone phosphorylation during vegetative growth","synonyms":[{"name":"decreased histone phosphorylation during mitotic cell cycle","type":"related"},{"name":"reduced histone phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002593"}


id: PBO:0004330
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitotic Spindle Disanchored","termid":"PBO:0004330"}


id: PBO:0087792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO E3 ligase; required for synaptonemal complex formation; localizes to synapsis initiation sites on meiotic chromosomes; associates with centromeres early in meiosis, then with chromosome axes and finally with double-strand break sites that are engaged in repair by crossovers; potential Cdc28p substrate","termid":"PBO:0087792"}


id: PR:000050536
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H4, hhf3 gene translation product (Schizosaccharomyces pombe) that has had the initiator methionine removed and that has been dimethylated at the position equivalent to Lys-21 of the amino acid sequence represented by UniProtKB:P09322. UniProtKB:P09322, 2-103, Lys-21, MOD:00084.","definition_xrefs":["PMID:22150589","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4, hhf3 gene translation product (Schizosaccharomyces pombe)","termid":"PR:000050528"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hhf3/Me2(K20)","pombase_gene_id":"SPBC1105.12","synonyms":[{"name":"PRO_0000158357, Lys-21, MOD:00084","type":"exact"},{"name":"PomBase_original_PRO_term_name: histone H4, hhf3 gene translation product, initiator methionine removed dimethylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hhf3/InitMet-/Me2:1","type":"exact"},{"name":"UniProtKB:P09322, 2-103, Lys-21, MOD:00084","type":"broad"},{"name":"hhf3/Me2(K20)","type":"exact"},{"name":"histone H4 K20me2 (Schizosaccharomyces pombe)","type":"broad"},{"name":"histone H4 hhf3 K20me2 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000050536"}


id: FYPO:0007592
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitophagy, i.e. autophagic degradation of the mitochondria, is normal (i.e. indistinguishable from wild type) when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitophagy","termid":"FYPO:0007591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal mitophagy during nitrogen starvation","synonyms":[{"name":"normal autophagy of mitochondrion during nitrogen depletion","type":"exact"},{"name":"normal autophagy of mitochondrion during nitrogen deprivation","type":"exact"},{"name":"normal autophagy of mitochondrion during nitrogen starvation","type":"exact"}],"termid":"FYPO:0007592"}


id: PBO:0117091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKAB1, TMEM233 and CCDC60 antisense RNA 1","termid":"PBO:0117091"}


id: PBO:0055413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2843","termid":"PBO:0055413"}


id: MONDO:0009162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ellis-van Creveld syndrome (EVC) is a skeletal and ectoderlam dysplasia characterized by a tetrad of short stature, postaxial polydactyly, ectodermal dysplasia, and congenital heart defects.","definition_xrefs":["Orphanet:289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"Jeune syndrome","termid":"MONDO:0018770"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0005267","MONDO:0005093","MONDO:0006025"],"is_obsolete":false,"name":"Ellis-van Creveld syndrome","secondary_identifiers":["MESH:D004613","UMLS:C0013903","GARD:1301","MedDRA:10008724","OMIM:225500","DOID:12714","ICD9:756.55","ICD10CM:Q77.6","NORD:1083","MEDGEN:8584","NCIT:C84684","SCTID:62501005"],"synonyms":[{"name":"Chondroectodermal dysplasia","type":"exact"},{"name":"EVC","type":"exact"},{"name":"Ellis Van Creveld Syndrome","type":"exact"},{"name":"Ellis Van Creveld syndrome","type":"exact"},{"name":"Ellis-VAN Creveld syndrome","type":"exact"},{"name":"Ellis-van Creveld syndrome","type":"exact"},{"name":"Mesoectodermal dysplasia","type":"exact"},{"name":"mesodermic dysplasia","type":"exact"}],"termid":"MONDO:0009162","xrefs":{"Monarch":{"xref_id":"0009162"}}}


id: PBO:0027041
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_binding_at_heat-shock-inducible_genes_during_cellular_response_to_heat_shock","termid":"PBO:0027041"}


id: PBO:0049391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein 4","termid":"PBO:0049391"}


id: GO:0022884
data:
  {"annotated_genes":["SJAG_03358","SJAG_05259","SJAG_04996","SJAG_00959","SJAG_02208","SJAG_03415","SJAG_03560","SJAG_03502","SJAG_03515","SJAG_02077","SJAG_01879","SJAG_02330","SJAG_01640","SJAG_04218"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75717,76741,80494,108005,75364,75173,74955,80893,69343,80713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008320"},{"annotations":[107019,105106,109403,109426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015450"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a macromolecule from one side of a membrane to the other.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00959":null,"SJAG_01640":null,"SJAG_01879":null,"SJAG_02077":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_04218":null,"SJAG_04996":null,"SJAG_05259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"macromolecule transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0022884","terms_by_termid":{"GO:0008320":null,"GO:0015450":null}}


id: GO:0097623
data:
  {"annotated_genes":["SJAG_04167"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114200],"is_not":false,"summary":null,"term":"GO:0097623"}]},"cv_name":"biological_process","definition":"The directed movement of potassium ions from inside of a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["PMID:11932440","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium ion transmembrane transport","termid":"GO:0071805"},{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04167":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"potassium ion export across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0071435","GO:0098668"],"synonyms":[{"name":"potassium export","type":"broad"},{"name":"potassium export across plasma membrane","type":"exact"},{"name":"potassium ion export","type":"broad"},{"name":"potassium ion export from cell","type":"exact"}],"termid":"GO:0097623","terms_by_termid":{"GO:0097623":null}}


id: GO:0070846
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of an Hsp90 protein by removal of acetyl groups.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deacetylation","termid":"GO:0006476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Hsp90 deacetylation","termid":"GO:0070846"}


id: MONDO:0019953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cystic malformation of the posterior fossa","termid":"MONDO:0020134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"mega-cisterna magna","secondary_identifiers":["UMLS:C1853377","MEDGEN:344031","GARD:19355","Orphanet:97252"],"termid":"MONDO:0019953","xrefs":{"Monarch":{"xref_id":"0019953"}}}


id: PBO:0051770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intracisternal A particle-promoted polypeptide","termid":"PBO:0051770"}


id: MOD:01817
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to a 2'-oxo-L-tryptophan.","definition_xrefs":["PubMed:9461080","RESID:AA0543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon oxygenated residue","termid":"MOD:00679"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidation of tryptophan to 2'-oxo-L-tryptophan","synonyms":[{"name":"(2S)-2-amino-3-[(3S)-2-oxo-2,3-dihydro-1H-indol-3-yl]propanoic acid","type":"exact"},{"name":"2'-oxo-L-tryptophan","type":"exact"},{"name":"2-azanyl-3-[(3S)-2-oxo-2,3-dihydro-1H-indol-3-yl]propanoic acid","type":"exact"},{"name":"2-oxo-L-tryptophan","type":"exact"},{"name":"2-oxotryptophan","type":"exact"}],"termid":"MOD:01817"}


id: FYPO:0006424
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between sister chromatids does not occur in centromeric regions during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic sister chromatid cohesion","termid":"FYPO:0002092"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abolished meiotic sister chromatid cohesion at centromere during meiosis I","synonyms":[{"name":"abolished meiotic sister chromatid cohesion at centromere during first meiotic nuclear division","type":"exact"},{"name":"abolished meiotic sister chromatid cohesion, centromeric, during meiosis I","type":"exact"},{"name":"abolished sister chromatid cohesion at centromere during meiosis I","type":"exact"},{"name":"meiotic sister chromatid cohesion abolished at centromere during meiosis I","type":"exact"}],"termid":"FYPO:0006424"}


id: PBO:0049833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haloacid dehalogenase like hydrolase domain containing 5","termid":"PBO:0049833"}


id: MONDO:0100119
data:
  {"annotated_genes":["SJAG_00845","SJAG_02878"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88961,88962],"is_not":false,"summary":null,"term":"MONDO:0100119"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Knobloch syndrome","termid":"MONDO:0800166"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00845":null,"SJAG_02878":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Knobloch syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618458","UMLS:C5676897","MEDGEN:1812153"],"termid":"MONDO:0100119","terms_by_termid":{"MONDO:0100119":null},"xrefs":{"Monarch":{"xref_id":"0100119"}}}


id: GO:0099058
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic endocytic zone membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of postsynaptic endocytic zone membrane (obsolete GO:0099058)","termid":"GO:0099058"}


id: PBO:0064716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 52","termid":"PBO:0064716"}


id: PBO:0000578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family","termid":"PBO:0000578"}


id: GO:0030868
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding the smooth endoplasmic reticulum.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"smooth endoplasmic reticulum","termid":"GO:0005790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005783","GO:0005789"],"is_obsolete":false,"name":"smooth endoplasmic reticulum membrane","secondary_identifiers":["NIF_Subcellular:sao1596955044"],"synonyms":[{"name":"SER membrane","type":"exact"},{"name":"smooth ER membrane","type":"exact"}],"termid":"GO:0030868"}


id: MONDO:0004046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A brain meningioma that occurs during childhood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pediatric meningioma","termid":"MONDO:0003057"},{"relation_name":"is_a","term_name":"brain neoplasm","termid":"MONDO:0021211"},{"relation_name":"is_a","term_name":"intracranial meningioma","termid":"MONDO:0850302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood brain meningioma","secondary_identifiers":["NCIT:C6253","DOID:6939","UMLS:C1332949","MEDGEN:234122"],"synonyms":[{"name":"Brain meningioma","type":"exact"},{"name":"brain paediatric meningioma","type":"exact"},{"name":"brain pediatric meningioma","type":"exact"},{"name":"childhood meningioma of brain","type":"exact"},{"name":"childhood meningioma of the brain","type":"exact"},{"name":"paediatric brain meningioma","type":"exact"},{"name":"paediatric meningioma of brain","type":"exact"},{"name":"paediatric meningioma of the brain","type":"exact"},{"name":"pediatric brain meningioma","type":"exact"},{"name":"pediatric meningioma of brain","type":"exact"},{"name":"pediatric meningioma of the brain","type":"exact"}],"termid":"MONDO:0004046","xrefs":{"Monarch":{"xref_id":"0004046"}}}


id: GO:0051296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that set the alignment of meiotic spindle relative to other cellular structures.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of spindle orientation","termid":"GO:0051294"},{"relation_name":"is_a","term_name":"establishment of meiotic spindle localization","termid":"GO:0051295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0007010","GO:0000226","GO:0051179","GO:0007163"],"is_obsolete":false,"name":"establishment of meiotic spindle orientation","synonyms":[{"name":"establishment of spindle orientation during meiosis","type":"related"},{"name":"establishment of spindle orientation involved in meiotic cell cycle","type":"exact"},{"name":"meiotic spindle orientation","type":"exact"},{"name":"orienting of meiotic spindle","type":"exact"}],"termid":"GO:0051296"}


id: GO:0060795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to specific cell fates of the endoderm, ectoderm, or mesoderm as a part of gastrulation.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"formation of primary germ layer","termid":"GO:0001704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell fate commitment involved in formation of primary germ layer","termid":"GO:0060795"}


id: GO:0021628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the olfactory nerve. This process pertains to the initial formation of a structure from unspecified parts. The olfactory nerve is a collection of sensory nerve rootlets that extend down from the olfactory bulb to the olfactory mucosa of the upper parts of the nasal cavity. This nerve conducts odor information to the brainstem.","definition_xrefs":["GO_REF:0000021","GOC:dph","ISBN:0838580343","GOC:jid","GOC:dgh","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"olfactory nerve morphogenesis","termid":"GO:0021627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory nerve formation","synonyms":[{"name":"CN I biosynthesis","type":"related"},{"name":"CN I formation","type":"related"}],"termid":"GO:0021628"}


id: GO:0042246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of lost or destroyed tissues.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regeneration","termid":"GO:0031099"},{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tissue regeneration","termid":"GO:0042246"}


id: PBO:0069793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1079, pseudogene","termid":"PBO:0069793"}


id: MONDO:0005812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute viral infection of the respiratory tract, occurring in isolated cases, in epidemics, or in pandemics; it is caused by serologically different strains of viruses (influenzaviruses) designated A, B, and C, has a 3-day incubation period, and usually lasts for 3 to 10 days. It is marked by inflammation of the nasal mucosa, pharynx, and conjunctiva; headache; myalgia; often fever, chills, and prostration; and occasionally involvement of the myocardium or central nervous system.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral respiratory tract infection","termid":"MONDO:0024352"},{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"influenza","secondary_identifiers":["EFO:0007328","MESH:D009976","NCIT:C53482","UMLS:C0021400","SCTID:61700007","MESH:D007251","ICD9:487.8","icd11.foundation:145723401","MEDGEN:9466","ICD9:487","DOID:8469"],"synonyms":[{"name":"Influenza with other manifestations","type":"exact"},{"name":"flu","type":"exact"},{"name":"influenza infection","type":"exact"},{"name":"influenza with non-respiratory manifestation","type":"exact"},{"name":"orthomyxoviridae caused disease or disorder","type":"exact"},{"name":"orthomyxoviridae disease or disorder","type":"exact"},{"name":"orthomyxoviridae infectious disease","type":"exact"}],"termid":"MONDO:0005812","xrefs":{"Monarch":{"xref_id":"0005812"}}}


id: MONDO:0005122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bacterial infection induced by Pectobacterium carotovorum which is is a bacterium of the family Enterobacteriaceae. This bacterius is a ubiquitous plant pathogen with a wide host range (carrot, potato, tomato, leafy greens, squash and other cucurbits, onion, green peppers, African violets etc.), able to cause disease in almost any plant tissue it invades. It is a very economically important pathogen in terms of postharvest losses, and a common cause of decay in stored fruits and vegetables. Decay caused by E. carotovora is often simply referred to as \\\"bacterial soft rot\\\" (BSR) though this may also be caused by other bacteria. Most plants or plant parts can resist invasion by the bacteria, unless some type of wound is present. High humidity and temperatures around 30°C favor development of decay. Mutants can be produced which are less virulent. Virulence factors include: pectinases, cellulases, (which degrade plant cell walls), and also proteases, lipases, xylanases and nucleases (along with the normal virulence factors for pathogens – Fe acquisition, LPS integrity, multiple global regulatory systems).","definition_xrefs":["EFO:0000781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pectobacterium carotovorum infection","secondary_identifiers":["Wikipedia:Pectobacterium_carotovorum"],"synonyms":[{"name":"Pectobacterium caused disease or disorder","type":"exact"},{"name":"Pectobacterium disease or disorder","type":"exact"},{"name":"Pectobacterium infectious disease","type":"exact"}],"termid":"MONDO:0005122","xrefs":{"Monarch":{"xref_id":"0005122"}}}


id: PBO:0068734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5A small nuclear 5, pseudogene","termid":"PBO:0068734"}


id: PBO:0082010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger SWIM-type containing 8","termid":"PBO:0082010"}


id: GO:0015041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. An electron transfer flavoprotein that functions as a housekeeping protein that is synthesized only under certain specific growth conditions and receives electrons from the oxidation of specific substrates, e.g. trimethylamine, carnitine and in nitrogen fixation.","definition_xrefs":["PMID:8599534"],"gene_count":0,"genotype_count":0,"name":"obsolete electron transfer flavoprotein, group II (obsolete GO:0015041)","synonyms":[{"name":"electron transfer flavoprotein, group II","type":"exact"}],"termid":"GO:0015041"}


id: GO:2000812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of barbed-end actin filament capping.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament polymerization","termid":"GO:0030833"},{"relation_name":"is_a","term_name":"regulation of actin filament depolymerization","termid":"GO:0030834"},{"relation_name":"regulates","term_name":"barbed-end actin filament capping","termid":"GO:0051016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0007010","GO:0030036","GO:0065003"],"is_obsolete":false,"name":"regulation of barbed-end actin filament capping","synonyms":[{"name":"regulation of barbed-end F-actin capping activity","type":"exact"},{"name":"regulation of barbed-end actin capping activity","type":"exact"},{"name":"regulation of plus-end F-actin capping activity","type":"exact"},{"name":"regulation of plus-end actin filament capping activity","type":"exact"}],"termid":"GO:2000812"}


id: MONDO:0014813
data:
  {"annotated_genes":["SJAG_00586"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87597],"is_not":false,"summary":null,"term":"MONDO:0014813"}]},"cv_name":"mondo","definition":"Any leukodystrophy in which the cause of the disease is a mutation in the HIKESHI gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00586":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hypomyelinating leukodystrophy 13","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060795","OMIM:616881","MEDGEN:896545","UMLS:C4225170"],"synonyms":[{"name":"HIKESHI leukodystrophy","type":"exact"},{"name":"HLD13","type":"exact"},{"name":"hikeshi leukodystrophy","type":"exact"},{"name":"hypomyelinating leukodystrophy type 13","type":"exact"},{"name":"leukodystrophy caused by mutation in HIKESHI","type":"exact"},{"name":"leukodystrophy caused by mutation in hikeshi","type":"exact"},{"name":"leukodystrophy, hypomyelinating, 13","type":"exact"},{"name":"leukodystrophy, hypomyelinating, type 13","type":"exact"}],"termid":"MONDO:0014813","terms_by_termid":{"MONDO:0014813":null},"xrefs":{"Monarch":{"xref_id":"0014813"}}}


id: PBO:0056697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis initiator","termid":"PBO:0056697"}


id: GO:0003675
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein (obsolete GO:0003675)","synonyms":[{"name":"protein","type":"exact"}],"termid":"GO:0003675"}


id: FYPO:0001565
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-threonine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular threonine level","synonyms":[{"name":"increased cellular L-threonine level","type":"exact"},{"name":"increased cellular threonine level during mitotic cell cycle","type":"related"},{"name":"increased cellular threonine level during vegetative growth","type":"exact"},{"name":"increased threonine accumulation","type":"related"}],"termid":"FYPO:0001565"}


id: PBO:0040190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 3","termid":"PBO:0040190"}


id: MONDO:0011459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any arrhythmogenic right ventricular cardiomyopathy in which the cause of the disease is a mutation in the TMEM43 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated arrhythmogenic right ventricular dysplasia","termid":"MONDO:0016342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"arrhythmogenic right ventricular dysplasia 5","secondary_identifiers":["MEDGEN:346805","DOID:0110074","MESH:C565776","OMIM:604400","UMLS:C1858379"],"synonyms":[{"name":"ARVC5","type":"exact"},{"name":"ARVD5","type":"exact"},{"name":"TMEM43 arrhythmogenic right ventricular cardiomyopathy","type":"exact"},{"name":"arrhythmogenic right ventricular cardiomyopathy 5","type":"exact"},{"name":"arrhythmogenic right ventricular cardiomyopathy caused by mutation in TMEM43","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia 5","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia type 5","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia, familial, 5","type":"related"},{"name":"arrhythmogenic right ventricular dysplasia, familial, type 5","type":"exact"},{"name":"familial arrhythmogenic right ventricular dysplasia 5","type":"exact"}],"termid":"MONDO:0011459","xrefs":{"Monarch":{"xref_id":"0011459"}}}


id: SO:0001742
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence alteration whereby the copy number of a given regions is greater than the reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copy_number_variation","termid":"SO:0001019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copy_number_gain","synonyms":[{"name":"copy number gain","type":"exact"},{"name":"gain","type":"related"}],"termid":"SO:0001742"}


id: PBO:0079522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TYRO3P protein tyrosine kinase pseudogene","termid":"PBO:0079522"}


id: PBO:0090494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rix1 complex WD repeat subunit Crb3","termid":"PBO:0090494"}


id: GO:0001966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an animal in response to touch.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thigmotaxis","synonyms":[{"name":"stereotaxis","type":"exact"},{"name":"taxis in response to mechanical stimulus","type":"broad"},{"name":"taxis in response to touch stimulus","type":"exact"}],"termid":"GO:0001966"}


id: FYPO:0000894
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which intracellular mitochondrion distribution, the process that results in the spatial arrangement of mitochondria in a cell, is abnormal.","definition_xrefs":["PomBase:mah","GO:0048312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial distribution","termid":"FYPO:0000489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abnormal intracellular mitochondrion distribution","synonyms":[{"name":"abnormal intracellular mitochondrion distribution during mitotic cell cycle","type":"related"},{"name":"abnormal intracellular mitochondrion distribution during vegetative growth","type":"exact"}],"termid":"FYPO:0000894"}


id: MONDO:0009413
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"common variable immunodeficiency","termid":"MONDO:0015517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"immunodeficiency, common variable, 2","secondary_identifiers":["OMIM:240500","GARD:15184","MEDGEN:461704","DOID:0081145","UMLS:C3150354"],"synonyms":[{"name":"CVID2","type":"related"},{"name":"antibody deficiency due to TACI defect","type":"related"},{"name":"hypogammaglobulinemia due to TACI deficiency","type":"related"},{"name":"immunodeficiency, common variable, 2","type":"exact"},{"name":"immunodeficiency, common variable, type 2","type":"exact"}],"termid":"MONDO:0009413","xrefs":{"Monarch":{"xref_id":"0009413"}}}


id: MONDO:0017015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"interstitial lung disease specific to childhood","termid":"MONDO:0017014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary interstitial lung disease specific to childhood","secondary_identifiers":["GARD:10559","UMLS:C3161253","Orphanet:264665","MEDGEN:853969","icd11.foundation:1408868257"],"synonyms":[{"name":"cHILD","type":"related"},{"name":"children's interstitial lung disease","type":"related"},{"name":"primary ILD specific to childhood","type":"exact"},{"name":"primary interstitial lung disease specific to childhood","type":"exact"}],"termid":"MONDO:0017015","xrefs":{"Monarch":{"xref_id":"0017015"}}}


id: GO:0141151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of nitric oxide-cGMP mediated signal transduction.","definition_xrefs":["PMID:35931019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nitric oxide mediated signal transduction","termid":"GO:0010751"},{"relation_name":"is_a","term_name":"negative regulation of cGMP-mediated signaling","termid":"GO:0010754"},{"relation_name":"is_a","term_name":"regulation of nitric oxide-cGMP mediated signal transduction","termid":"GO:0141149"},{"relation_name":"negatively_regulates","term_name":"nitric oxide-cGMP-mediated signaling","termid":"GO:0038060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of nitric oxide-cGMP mediated signal transduction","termid":"GO:0141151"}


id: FYPO:0005067
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 1,1-bis(2-aminoethyl)-2-hydroxy-3-oxotriazane (DETA NONOate). Cells stop growing (and may die) at a concentration of 1,1-bis(2-aminoethyl)-2-hydroxy-3-oxotriazane that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to 1,1-bis(2-aminoethyl)-2-hydroxy-3-oxotriazane","synonyms":[{"name":"hypersensitive to 1,1-bis(2-aminoethyl)-2-hydroxy-3-oxotriazane","type":"exact"},{"name":"sensitive to 1,1-bis(2-aminoethyl)-2-hydroxy-3-oxotriazane during mitotic cell cycle","type":"related"},{"name":"sensitive to 1,1-bis(2-aminoethyl)-2-hydroxy-3-oxotriazane during vegetative growth","type":"exact"},{"name":"sensitive to DETA NONOate","type":"exact"},{"name":"sensitive to diethylenetriamine NONOate","type":"exact"}],"termid":"FYPO:0005067"}


id: MONDO:0018708
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tongue squamous cell carcinoma","termid":"MONDO:0000500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"squamous cell carcinoma of the oral tongue","secondary_identifiers":["NCIT:C8169","Orphanet:457252"],"synonyms":[{"name":"OTSCC","type":"exact"},{"name":"oral tongue squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0018708","xrefs":{"Monarch":{"xref_id":"0018708"}}}


id: MONDO:0018355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Prader-Willi-like syndrome","termid":"MONDO:0018354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"SIM1-related Prader-Willi-like syndrome","secondary_identifiers":["UMLS:C5680040","MEDGEN:1802084","GARD:21642","Orphanet:398079"],"synonyms":[{"name":"PWS-like due to a point mutation","type":"related"},{"name":"PWS-like due to point mutation","type":"related"},{"name":"Prader-Willi-like syndrome due to a point mutation","type":"related"},{"name":"SIM1-related PWLS","type":"exact"}],"termid":"MONDO:0018355","xrefs":{"Monarch":{"xref_id":"0018355"}}}


id: PBO:0044574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dopamine beta-hydroxylase","termid":"PBO:0044574"}


id: PBO:0030846
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cell_tip,_with_protein_distributed_in_plasma_membrane_or_cortex","termid":"PBO:0030846"}


id: PBO:0038815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 20 pseudogene 2","termid":"PBO:0038815"}


id: SO:0001334
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Hydroxywybutosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxywybutosine","secondary_identifiers":["RNAMOD:039"],"synonyms":[{"name":"OHyW","type":"exact"}],"termid":"SO:0001334"}


id: RO:0009005
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"'has primary substance added' indicates that an entity has had the given substance added to it in a proportion greater than any other added substance.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_substance_added","termid":"RO:0009001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_primary_substance_added","termid":"RO:0009005"}


id: MONDO:0003166
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pilocytic astrocytoma (obsolete MONDO:0003166)","termid":"MONDO:0003166","xrefs":{"Monarch":{"xref_id":"0003166"}}}


id: MONDO:0016826
data:
  {"annotated_genes":["SJAG_01199"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010184"}]},"cv_name":"mondo","definition":"An inborn error of vitamin B12 (cobalamin) metabolism characterized by megaloblastic anemia, lethargy, failure to thrive, developmental delay, intellectual deficit and seizures. There are four complementation classes of cobalamin defects (cblC, cblD, cblF and cblJ) that are responsible for methylmalonic acidemia - homocystinuria (methylmalonic acidemia - homocystinuria cblC, cblD cblF and cblJ).","definition_xrefs":["Orphanet:26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylmalonic acidemia","termid":"MONDO:0002012"},{"relation_name":"is_a","term_name":"homocystinuria","termid":"MONDO:0004737"},{"relation_name":"is_a","term_name":"hereditary anemia","termid":"MONDO:0016624"},{"relation_name":"is_a","term_name":"classic organic aciduria","termid":"MONDO:0019215"},{"relation_name":"is_a","term_name":"inborn disorder of cobalamin metabolism and transport","termid":"MONDO:0019220"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01199":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0002280","MONDO:0005066","MONDO:0005570"],"is_obsolete":false,"name":"methylmalonic aciduria and homocystinuria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:3579","MESH:C537359","MEDGEN:1864102","UMLS:C5848324","OMIMPS:277400"],"synonyms":[{"name":"combined defect in adenosylcobalamin and methylcobalamin synthesis","type":"exact"},{"name":"methylmalonic acidemia and homocystinemia","type":"related"},{"name":"methylmalonic aciduria with homocystinuria","type":"exact"}],"termid":"MONDO:0016826","terms_by_termid":{"MONDO:0010184":null},"xrefs":{"Monarch":{"xref_id":"0016826"}}}


id: MONDO:0004647
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant epithelial neoplasm which is confined to the epithelial layer without evidence of further tissue invasion.","definition_xrefs":["NCIT:C2917"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pre-malignant neoplasm","termid":"MONDO:0000611"},{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"},{"relation_name":"is_a","term_name":"high grade malignant neoplasm","termid":"MONDO:0020665"},{"relation_name":"is_a","term_name":"precancerous condition","termid":"MONDO:0021074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"in situ carcinoma","secondary_identifiers":["ICDO:8010/2","ICD9:230-234","ICD9:234.8","MESH:D002278","ICD9:234.9","MEDGEN:763","SCTID:109355002","UMLS:C0007099","DOID:8719"],"synonyms":[{"name":"CIS","type":"broad"},{"name":"carcinoma in situ","type":"exact"},{"name":"carcinoma, in situ, malignant","type":"exact"},{"name":"epithelial tumor, in situ, malignant","type":"exact"},{"name":"intraepithelial carcinoma","type":"exact"},{"name":"non-invasive carcinoma","type":"exact"},{"name":"stage 0 disease","type":"exact"}],"termid":"MONDO:0004647","xrefs":{"Monarch":{"xref_id":"0004647"}}}


id: MONDO:0013657
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant non-syndromic intellectual disability in which the cause of the disease is a mutation in the CACNG2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 10","secondary_identifiers":["MEDGEN:481914","OMIM:614256","DOID:0070040","GARD:16460","UMLS:C3280284"],"synonyms":[{"name":"CACNG2 autosomal dominant non-syndromic intellectual disability","type":"exact"},{"name":"MRD10","type":"exact"},{"name":"autosomal dominant intellectual disability 10","type":"exact"},{"name":"autosomal dominant mental retardation 10","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 10","type":"related"},{"name":"autosomal dominant non-syndromic intellectual disability caused by mutation in CACNG2","type":"exact"},{"name":"intellectual disability, autosomal dominant 10","type":"exact"},{"name":"intellectual disability, autosomal dominant type 10","type":"exact"},{"name":"mental retardation, autosomal dominant 10","type":"related"},{"name":"mental retardation, autosomal dominant type 10","type":"exact"}],"termid":"MONDO:0013657","xrefs":{"Monarch":{"xref_id":"0013657"}}}


id: PBO:0047749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folliculin interacting protein 2","termid":"PBO:0047749"}


id: GO:0004383
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP = 3',5'-cyclic GMP + diphosphate.","definition_xrefs":["EC:4.6.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674","GO:0009975"],"is_obsolete":false,"name":"guanylate cyclase activity","secondary_identifiers":["MetaCyc:GUANYLCYC-RXN","Reactome:R-HSA-392152","RHEA:13665","Reactome:R-HSA-74885"],"synonyms":[{"name":"GTP diphosphate-lyase (cyclizing) activity","type":"related"},{"name":"GTP diphosphate-lyase (cyclizing; 3',5'-cyclic-GMP-forming) activity","type":"related"},{"name":"guanyl cyclase activity","type":"related"},{"name":"guanylyl cyclase activity","type":"exact"},{"name":"receptor guanylate cyclase activity","type":"narrow"}],"termid":"GO:0004383"}


id: PBO:0026884
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_RNA_polymerase_II_promoter_during_nitrogen_starvation","termid":"PBO:0026884"}


id: PBO:0002836
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression induced by salt stress","termid":"PBO:0002836"}


id: PBO:0086772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; subunit of evolutionarily conserved EMC (Endoplasmic Reticulum Membrane Complex) implicated in ERAD (ER-associated degradation) and proper assembly of multi-pass transmembrane (TM) proteins; EMC acts in yeast as an ER-mitochondria tether that interacts with outer membrane protein Tom5p of TOM (Translocase of the Mitochondrial Outer Membrane) complex; YDR056C is not an essential protein","termid":"PBO:0086772"}


id: MONDO:0014184
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A communication disorder that involves the processing of linguistic information.","direct_ancestors":[{"relation_name":"is_a","term_name":"specific language impairment","termid":"MONDO:0000724"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"specific language impairment 5","secondary_identifiers":["EFO:0005425","MEDGEN:815813","OMIM:615432","UMLS:C3809483"],"synonyms":[{"name":"SLI5","type":"exact"},{"name":"specific language impairment 5","type":"exact"},{"name":"specific language impairment type 5","type":"exact"}],"termid":"MONDO:0014184","xrefs":{"Monarch":{"xref_id":"0014184"}}}


id: MONDO:0011000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase 2E","secondary_identifiers":["OMIM:601138"],"synonyms":[{"name":"GC-E","type":"related"},{"name":"GUCY2E","type":"related"},{"name":"GUCY2EP","type":"related"},{"name":"Gucy2D, mouse, homolog of","type":"related"},{"name":"guanylate cyclase 2E","type":"exact"},{"name":"guanylate cyclase 2E, pseudogene","type":"related"},{"name":"guanylate cyclase type 2E","type":"exact"},{"name":"guanylyl cyclase, Membrane, type E","type":"related"}],"termid":"MONDO:0011000","xrefs":{"Monarch":{"xref_id":"0011000"}}}


id: MONDO:0001790
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign adipose tissue neoplasm of the spinal cord. It is usually associated with dysraphism in which the intraspinal component communicates with a subcutaneous lipoma through a defect in the posterior elements of the spine. Non-dysraphic intramedullary spinal cord lipomas are very rare.","definition_xrefs":["NCIT:C4619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system lipoma","termid":"MONDO:0003844"},{"relation_name":"is_a","term_name":"benign neoplasm of spinal cord","termid":"MONDO:0021506"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal cord lipoma","secondary_identifiers":["Orphanet:645276","SCTID:189017000","UMLS:C0347446","NANDO:2200815","DOID:13743","ICD9:214.8","MEDGEN:91131"],"synonyms":[{"name":"lipoma of spinal cord","type":"exact"},{"name":"spinal cord lipoma","type":"exact"}],"termid":"MONDO:0001790","xrefs":{"Monarch":{"xref_id":"0001790"}}}


id: MONDO:0000023
data:
  {"annotated_genes":["SJAG_04956","SJAG_01166","SJAG_02015","SJAG_00358"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013111"},{"annotations":[87707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024568"},{"annotations":[86911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014659"},{"annotations":[88645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032844"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"liver failure","termid":"MONDO:0100192"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00358":null,"SJAG_01166":null,"SJAG_02015":null,"SJAG_04956":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"infantile liver failure","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5681094","Orphanet:464724","OMIMPS:615438","DOID:0080716","GARD:17820","MEDGEN:1813021"],"synonyms":[{"name":"fever-associated acute infantile liver failure syndrome","type":"exact"},{"name":"infantile liver failure syndrome","type":"exact"},{"name":"liver failure, infantile","type":"exact"}],"termid":"MONDO:0000023","terms_by_termid":{"MONDO:0013111":null,"MONDO:0014659":null,"MONDO:0024568":null,"MONDO:0032844":null},"xrefs":{"Monarch":{"xref_id":"0000023"}}}


id: GO:0090007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mitotic anaphase, a cell cycle process comprising the steps by which a cell progresses through anaphase, the stage of mitosis during which the two sets of chromosomes separate and move away from each other.","definition_xrefs":["GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mitotic anaphase (obsolete GO:0090007)","synonyms":[{"name":"regulation of mitotic anaphase","type":"exact"}],"termid":"GO:0090007"}


id: PR:O94574
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1773.17c gene.","definition_xrefs":["UniProtKB:O94574","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hydroxyacid dehydrogenase C1773.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.17c","synonyms":[{"name":"Spom972h-SPBC1773.17c","type":"exact"}],"termid":"PR:O94574"}


id: PBO:0017429
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_has_input","termid":"PBO:0017429"}


id: PBO:0083296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; open reading frame overlaps the verified gene RFC1/YOR217W","termid":"PBO:0083296"}


id: GO:0102698
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (+)-5-epi-aristolochene + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:4.2.3.61"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"5-epi-aristolochene synthase activity","secondary_identifiers":["MetaCyc:RXN-4781","RHEA:28635"],"termid":"GO:0102698"}


id: PBO:0079395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUBB4B pseudogene 2","termid":"PBO:0079395"}


id: PBO:0072216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S19","termid":"PBO:0072216"}


id: MONDO:0015243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Allergic bronchopulmonary aspergillosis (ABPA) is a rare immunologic pulmonary disorder caused by hypersensitivity to Aspergillus fumigatus, clinically manifesting with poorly controlled asthma and recurrent pulmonary infiltrates.","definition_xrefs":["Orphanet:1164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allergic respiratory disease","termid":"MONDO:0000771"},{"relation_name":"is_a","term_name":"aspergillosis","termid":"MONDO:0005657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"allergic bronchopulmonary aspergillosis","secondary_identifiers":["NCIT:C84547","ICD10EXP:B44.1+","SCTID:37981002","icd11.foundation:1591607082","ICD10CM:B44.81","OMIM:103920","GARD:602","DOID:13166","EFO:0007140","MedDRA:10006474","ICD10EXP:J99.8*","MEDGEN:479932","ICD9:518.6","MESH:D001229","UMLS:C3278302"],"synonyms":[{"name":"ABPA","type":"exact"},{"name":"Hinson-Pepys disease","type":"exact"},{"name":"allergic aspergillosis","type":"exact"},{"name":"allergic bronchopulmonary aspergillosis, familial","type":"related"},{"name":"allergic bronchopulmonary mycosis","type":"related"},{"name":"aspergillosis, allergic bronchopulmonary","type":"related"},{"name":"pulmonary aspergillus disease","type":"exact"}],"termid":"MONDO:0015243","xrefs":{"Monarch":{"xref_id":"0015243"}}}


id: PBO:0091558
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TetratricoPeptide Repeat","termid":"PBO:0091558"}


id: PBO:0071403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 9","termid":"PBO:0071403"}


id: GO:0004001
data:
  {"annotated_genes":["SJAG_01070"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71734],"is_not":false,"summary":null,"term":"GO:0004001"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + adenosine = ADP + AMP.","definition_xrefs":["EC:2.7.1.20","PMID:11223943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside kinase activity","termid":"GO:0019206"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01070":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"adenosine kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:20824","MetaCyc:ADENOSINE-KINASE-RXN","Reactome:R-HSA-109624","Reactome:R-HSA-9754974"],"synonyms":[{"name":"ATP:adenosine 5'-phosphotransferase activity","type":"related"},{"name":"adenosine 5-phosphotransferase activity","type":"exact"},{"name":"adenosine kinase (phosphorylating)","type":"related"}],"termid":"GO:0004001","terms_by_termid":{"GO:0004001":null}}


id: GO:0031325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways by which individual cells transform chemical substances.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cellular metabolic process (obsolete GO:0031325)","secondary_identifiers":["Reactome:R-HSA-163765"],"synonyms":[{"name":"activation of cellular metabolic process","type":"narrow"},{"name":"positive regulation of cellular metabolism","type":"exact"},{"name":"stimulation of cellular metabolic process","type":"narrow"},{"name":"up regulation of cellular metabolic process","type":"exact"},{"name":"up-regulation of cellular metabolic process","type":"exact"},{"name":"upregulation of cellular metabolic process","type":"exact"}],"termid":"GO:0031325"}


id: PBO:0063394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCD6IP pseudogene 1","termid":"PBO:0063394"}


id: GO:0047925
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + bicarbonate + geranoyl-CoA = 3-(4-methylpent-3-en-1-yl)pent-2-enedioyl-CoA + ADP + 2 H+ + phosphate.","definition_xrefs":["RHEA:17701","EC:6.4.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA carboxylase activity","termid":"GO:0016421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"geranoyl-CoA carboxylase activity","secondary_identifiers":["KEGG_REACTION:R03494","UM-BBD_reactionID:r1166","MetaCyc:GERANOYL-COA-CARBOXYLASE-RXN"],"synonyms":[{"name":"geranoyl coenzyme A carboxylase activity","type":"related"},{"name":"geranoyl-CoA:carbon-dioxide ligase (ADP-forming)","type":"related"},{"name":"geranyl-CoA carboxylase activity","type":"related"}],"termid":"GO:0047925"}


id: PBO:0059849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 2","termid":"PBO:0059849"}


id: GO:0044726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The global programming of epigenetic modifications in the female pronucleus of the newly fertilized zygote. The maternal genome is protected from global DNA demethylation before the first division of the zygote, and instead undergoes passive, replication-dependent demethylation during early embryogenesis, arising from inhibition of the DNA maintenance methyltransferase Dnmt1.","definition_xrefs":["PMID:22868271","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epigenetic programming in the zygotic pronuclei","termid":"GO:0044725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006325"],"is_obsolete":false,"name":"epigenetic programing of female pronucleus","synonyms":[{"name":"maintenance of DNA methylation at imprinted genes","type":"related"},{"name":"protection of DNA demethylation of female pronucleus","type":"narrow"},{"name":"protection of DNA methylation in female pronucleus","type":"narrow"}],"termid":"GO:0044726"}


id: PBO:0084840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; appears as two protein spots (YmL10 and YmL18) on two-dimensional SDS gels","termid":"PBO:0084840"}


id: MONDO:0012881
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bipolar disorder","termid":"MONDO:0004985"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major affective disorder 7","secondary_identifiers":["MESH:C567529","MEDGEN:438008","OMIM:612371","UMLS:C2700438"],"synonyms":[{"name":"MAFD7","type":"related"},{"name":"bipolar affective disorder","type":"related"},{"name":"major affective disorder 7","type":"exact"},{"name":"major affective disorder type 7","type":"exact"},{"name":"major affective disorder-7, susceptibility to","type":"exact"}],"termid":"MONDO:0012881","xrefs":{"Monarch":{"xref_id":"0012881"}}}


id: GO:0031890
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a vasoactive intestinal polypeptide receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"vasoactive intestinal polypeptide receptor binding","synonyms":[{"name":"VIP receptor binding","type":"exact"},{"name":"vasoactive intestinal polypeptide receptor ligand","type":"narrow"}],"termid":"GO:0031890"}


id: MOD:00909
data:
  {"annotated_genes":["SJAG_01671"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[82372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00226"}]},"cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-histidine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01671":null},"genotype_count":0,"is_obsolete":false,"name":"modified L-histidine residue","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"ModHis","type":"exact"}],"termid":"MOD:00909","terms_by_termid":{"MOD:00226":null}}


id: PBO:0080192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VENT homeobox","termid":"PBO:0080192"}


id: PATO:0001876
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape quality inhering in a bearer by virtue of the bearer's having two parts, roughly spherical and of equal size, connected by a bar.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dumbbell-shaped","termid":"PATO:0001876"}


id: MONDO:0016943
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 6p duplication is a chromosome abnormality that occurs when there is an extra copy of genetic material on the short arm (p) of chromosome 6. The severity of the condition and the signs and symptoms depend on the size and location of the duplication and which genes are involved. Features that often occur in people with chromosome 6p duplication include developmental delay, intellectual disability, behavioral problems and distinctive facial features. This condition can occur sporadically or be inherited from a parent who is either mildy affected (has the deletion) or carries a balanced translocation. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0005352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 6","termid":"MONDO:0016927"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the short arm of chromosome 6","secondary_identifiers":["MESH:C537811","icd11.foundation:657610285","MEDGEN:1826043","GARD:5352","Orphanet:262740","UMLS:C5679721"],"synonyms":[{"name":"6p duplication","type":"related"},{"name":"6p trisomy","type":"related"},{"name":"Duplication 6p","type":"related"},{"name":"chromosome 6p duplication","type":"related"},{"name":"partial duplication of chromosome 6p","type":"exact"},{"name":"partial duplication of the short arm of chromosome type 6","type":"exact"},{"name":"partial trisomy 6p","type":"related"},{"name":"partial trisomy of chromosome 6p","type":"exact"},{"name":"partial trisomy of the short arm of chromosome 6","type":"exact"},{"name":"trisomy 6p","type":"related"}],"termid":"MONDO:0016943","xrefs":{"Monarch":{"xref_id":"0016943"}}}


id: PBO:0090951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha SNAP","termid":"PBO:0090951"}


id: GO:0045119
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + azole(in) = H+(in) + azole(out). Azoles are heterocyclic compounds found in many biologically important substances.","definition_xrefs":["GOC:ai","ISBN:3527307206","Wikipedia:Azole"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"azole transmembrane transporter activity","termid":"GO:1901474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"azole:proton antiporter activity","synonyms":[{"name":"azole:hydrogen antiporter activity","type":"exact"},{"name":"bicyclomycin/sulfathiazole:hydrogen antiporter activity","type":"narrow"}],"termid":"GO:0045119"}


id: PBO:0056853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain associated RNA transcript","termid":"PBO:0056853"}


id: PBO:0031431
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_glycerol_dehydrogenase_activity","termid":"PBO:0031431"}


id: PBO:0090622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-ketoglutarate-dependent xanthine dioxygenase Xan1","termid":"PBO:0090622"}


id: PATO:0001956
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability quality inhering in a bearer by virtue of whether the bearer exhibits size variation or change.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variability","termid":"PATO:0001303"},{"relation_name":"towards","term_name":"size","termid":"PATO:0000117"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variability of size","termid":"PATO:0001956"}


id: MONDO:0012260
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cataract that has material basis in variation in the region 19q13.","definition_xrefs":["DOID:0110261","PMID:15671291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset nuclear cataract","termid":"MONDO:0020376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 35","secondary_identifiers":["UMLS:C1836272","MESH:C563728","GARD:9492","MEDGEN:373050","OMIM:609376"],"synonyms":[{"name":"CATCN1","type":"exact"},{"name":"CTRCT35","type":"exact"},{"name":"autosomal recessive congenital nuclear cataract 1","type":"exact"},{"name":"cataract 35","type":"exact"},{"name":"cataract 35, congenital nuclear","type":"exact"},{"name":"cataract type 35","type":"exact"},{"name":"cataract, congenital nuclear, autosomal recessive 1","type":"related"}],"termid":"MONDO:0012260","xrefs":{"Monarch":{"xref_id":"0012260"}}}


id: PBO:0110477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FIGLA pseudogene 1","termid":"PBO:0110477"}


id: MONDO:0001193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chorioretinal scar (obsolete MONDO:0001193)","secondary_identifiers":["ICD9:363.30","SCTID:53854005","ICD9:363.3","DOID:11086"],"termid":"MONDO:0001193","xrefs":{"Monarch":{"xref_id":"0001193"}}}


id: PBO:0048004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing 4B","termid":"PBO:0048004"}


id: PBO:0074754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 113","termid":"PBO:0074754"}


id: MONDO:0005619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bacterial infectious disorder contracted by consumption of food or drink contaminated with Salmonella typhi. This disorder is common in developing countries and can be treated with antibiotics.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salmonellosis","termid":"MONDO:0000827"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"typhoid fever","secondary_identifiers":["DOID:13258","NCIT:C35089","ICD10CM:A01.0","EFO:0006789","MONDO:0020486","icd11.foundation:1528414070","MEDGEN:11973","ICD9:002.0","MESH:D014435","Orphanet:99745","SCTID:4834000","GARD:9564","UMLS:C0041466"],"synonyms":[{"name":"typhoid","type":"exact"},{"name":"typhoid fever","type":"exact"},{"name":"typhoidal salmonellosis","type":"exact"}],"termid":"MONDO:0005619","xrefs":{"Monarch":{"xref_id":"0005619"}}}


id: GO:0120092
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxybutanoyl-CoA = (2E)-butenoyl-CoA + H2O. (2E)-butenoyl-CoA is also known as crotonoyl-CoA.","definition_xrefs":["RHEA:45584","PMID:28803779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-hydroxyacyl-CoA dehydratase activity","termid":"GO:0018812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"crotonyl-CoA hydratase activity","termid":"GO:0120092"}


id: GO:0046027
data:
  {"annotated_genes":["SJAG_03162"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76306],"is_not":false,"summary":null,"term":"GO:0046027"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a glycerophospholipid + a 1,2-diacyl-sn-glycerol = a monoacylglycerophospholipid + a triacyl-sn-glycerol.","definition_xrefs":["RHEA:14057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"phospholipid:diacylglycerol acyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:2.3.1.158","MetaCyc:2.3.1.158-RXN"],"synonyms":[{"name":"PDAT activity","type":"related"},{"name":"phospholipid:1,2-diacyl-sn-glycerol O-acyltransferase activity","type":"related"}],"termid":"GO:0046027","terms_by_termid":{"GO:0046027":null}}


id: PATO:0002100
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a bearer by virtue of having not yet acquired a special structure of function.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular potency","termid":"PATO:0001397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"undifferentiated","termid":"PATO:0002100"}


id: MONDO:0000670
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An agnosia that is a loss of the ability to perceive any auditory information but whose hearing is intact.","definition_xrefs":["DOID:0060140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auditory agnosia","termid":"MONDO:0000667"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortical deafness","secondary_identifiers":["UMLS:C0392704","MEDGEN:98233"],"termid":"MONDO:0000670","xrefs":{"Monarch":{"xref_id":"0000670"}}}


id: PBO:0080057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP27X divergent transcript","termid":"PBO:0080057"}


id: PBO:0063579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PERP pseudogene 2","termid":"PBO:0063579"}


id: PBO:0040259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 12 pseudogene 2","termid":"PBO:0040259"}


id: GO:0008725
data:
  {"annotated_genes":["SJAG_01971"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103400],"is_not":false,"summary":null,"term":"GO:0008725"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: DNA containing 3-methyladenine + H2O = DNA with abasic site + 3-methyladenine. This reaction is the hydrolysis of DNA by cleavage of the N-C1' glycosidic bond between the damaged DNA 3-methyladenine and the deoxyribose sugar to remove the 3-methyladenine, leaving an abasic site.","definition_xrefs":["GOC:elh","PMID:10872450","EC:3.2.2.20","PMID:9224623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-3-methylbase glycosylase activity","termid":"GO:0043733"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01971":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0140097","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"DNA-3-methyladenine glycosylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN0-5189"],"synonyms":[{"name":"3-methyladenine DNA glycosylase I","type":"related"},{"name":"DNA glycosidase I activity","type":"related"},{"name":"DNA-3-methyladenine glycosidase I activity","type":"related"},{"name":"DNA-3-methyladenine glycosylase I activity","type":"exact"},{"name":"deoxyribonucleate 3-methyladenine glycosidase I","type":"related"}],"termid":"GO:0008725","terms_by_termid":{"GO:0008725":null}}


id: PBO:0063802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylase kinase regulatory subunit alpha 1 pseudogene","termid":"PBO:0063802"}


id: GO:0030601
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of N-terminal Arg and Lys from oligopeptides when P1' is not Pro. Also acts on arylamides of Arg and Lys.","definition_xrefs":["EC:3.4.11.6"],"gene_count":0,"genotype_count":0,"name":"obsolete aminopeptidase B activity (obsolete GO:0030601)","synonyms":[{"name":"Cl--activated arginine aminopeptidase activity","type":"related"},{"name":"L-arginine aminopeptidase activity","type":"related"},{"name":"aminopeptidase B activity","type":"exact"},{"name":"arginyl aminopeptidase activity","type":"exact"},{"name":"arylamidase II","type":"related"},{"name":"cytosol aminopeptidase IV","type":"related"}],"termid":"GO:0030601"}


id: MONDO:0005808
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the conjunctiva in a newborn due to Chlamydia trachomatis which was acquired during labor and delivery.","definition_xrefs":["NCIT:C116817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlamydia trachomatis infectious disease","termid":"MONDO:0005701"},{"relation_name":"is_a","term_name":"bacterial conjunctivitis","termid":"MONDO:0006668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"inclusion conjunctivitis","secondary_identifiers":["EFO:0007324","MESH:D003235","ICD10CM:A74.0","DOID:13800","ICD9:077.0","SCTID:231861005","ICD9:077.98","UMLS:C0009770","MEDGEN:1095"],"synonyms":[{"name":"Chlamydial conjunctivitis","type":"exact"},{"name":"Paratrachoma","type":"related"},{"name":"Trachoma","type":"exact"},{"name":"adult inclusion conjunctivitis","type":"exact"},{"name":"inclusion blennorrhoea","type":"exact"},{"name":"inclusion blenorrhea","type":"exact"},{"name":"neonatal Chlamydia conjunctivitis","type":"exact"}],"termid":"MONDO:0005808","xrefs":{"Monarch":{"xref_id":"0005808"}}}


id: MONDO:1010836
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Wilson disease that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Wilson disease, non-human animal","termid":"MONDO:1010164"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wilson disease, sheep","secondary_identifiers":["OMIA:001071-9940"],"termid":"MONDO:1010836","xrefs":{"Monarch":{"xref_id":"1010836"}}}


id: GO:0097228
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The segment of the sperm flagellum where the mitochondrial sheath ends, and the outer dense fibers (ODFs) associated with outer axonemal doublets 3 and 8 are replaced by the 2 longitudinal columns of the fibrous sheath (FS) which run the length of the principal piece and are stabilized by circumferential ribs. The principal piece makes up ~2/3 of the length of the sperm flagellum and is defined by the presence of the FS and of only 7 (rather than 9) ODFs which taper and then terminate near the distal end of the principal piece.","definition_xrefs":["GOC:cjm","MP:0009836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sperm flagellum","termid":"GO:0036126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sperm principal piece","termid":"GO:0097228"}


id: GO:0071211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of directing proteins towards the vacuole using signals contained within the protein, occurring as part of autophagy, the process in which cells digest parts of their own cytoplasm.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein targeting to vacuole","termid":"GO:0006623"},{"relation_name":"part_of","term_name":"autophagy","termid":"GO:0006914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006605"},{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006914","GO:0006810","GO:0006605","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein targeting to vacuole involved in autophagy","synonyms":[{"name":"protein targeting to autophagosome","type":"related"}],"termid":"GO:0071211"}


id: GO:2000536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of entry of bacterium into host cell.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of entry of bacterium into host cell","termid":"GO:2000535"},{"relation_name":"negatively_regulates","term_name":"entry of bacterium into host cell","termid":"GO:0035635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of entry of bacterium into host cell","synonyms":[{"name":"negative regulation of bacterial entry into host cell","type":"exact"},{"name":"negative regulation of invasion of bacteria into host cell","type":"exact"}],"termid":"GO:2000536"}


id: PBO:0065021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin 3","termid":"PBO:0065021"}


id: GO:0001028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an RNA polymerase III (Pol III) complex, typically composed of seventeen subunits, and with another protein, macromolecule, or complex, permitting those molecules to function in a coordinated way. Once recruited to an RNA polymerase III type 2 promoter by a TFIIIC-type factor, binds to DNA, recruits RNA polymerase III and facilitates the transition from the closed to the open complex.","definition_xrefs":["GOC:txnOH-2018","PMID:12381659"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase III type 2 promoter TFIIIB-type transcription factor activity (obsolete GO:0001028)","synonyms":[{"name":"RNA polymerase III type 2 promoter polymerase recruiting transcription factor activity","type":"related"}],"termid":"GO:0001028"}


id: GO:0070961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the directed killing of a symbiont target cell by a neutrophil.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to biotic stimulus","termid":"GO:0002833"},{"relation_name":"is_a","term_name":"positive regulation of defense response","termid":"GO:0031349"},{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"is_a","term_name":"positive regulation of killing of cells of another organism","termid":"GO:0051712"},{"relation_name":"is_a","term_name":"regulation of neutrophil mediated killing of symbiont cell","termid":"GO:0070949"},{"relation_name":"is_a","term_name":"positive regulation of neutrophil mediated cytotoxicity","termid":"GO:0070960"},{"relation_name":"positively_regulates","term_name":"neutrophil-mediated killing of symbiont cell","termid":"GO:0070943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neutrophil mediated killing of symbiont cell","synonyms":[{"name":"activation of neutrophil mediated killing of symbiont cell","type":"narrow"},{"name":"stimulation of neutrophil mediated killing of symbiont cell","type":"narrow"},{"name":"up regulation of neutrophil mediated killing of symbiont cell","type":"exact"},{"name":"up-regulation of neutrophil mediated killing of symbiont cell","type":"exact"},{"name":"upregulation of neutrophil mediated killing of symbiont cell","type":"exact"}],"termid":"GO:0070961"}


id: GO:0035581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of binding or confining an extracellular signaling ligand, such that the ligand is unable to bind to its cell surface receptor.","definition_xrefs":["GOC:BHF","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular negative regulation of signal transduction","termid":"GO:1900116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"sequestering of extracellular ligand from receptor","synonyms":[{"name":"extracellular sequestering of receptor ligand","type":"exact"},{"name":"negative regulation of protein bioavailability","type":"related"}],"termid":"GO:0035581"}


id: MONDO:0000073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete nail disorder, nonsyndromic congenital (obsolete MONDO:0000073)","termid":"MONDO:0000073","xrefs":{"Monarch":{"xref_id":"0000073"}}}


id: PBO:0049553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 15","termid":"PBO:0049553"}


id: PBO:0031901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIP domain protein Grp2 (predicted)","termid":"PBO:0031901"}


id: MOD:01491
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Applied Biosystems iTRAQ4plex-114 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-114 reporter+balance reagent acylated residue","termid":"MOD:01485"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent O-acylated residue","termid":"MOD:01713"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-114 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"iTRAQ4plex114","type":"related"}],"termid":"MOD:01491"}


id: FYPO:0006535
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell periphery is increased when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell periphery","termid":"FYPO:0006533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to cell periphery during nitrogen starvation","synonyms":[{"name":"increased protein localisation to cell periphery during nitrogen starvation","type":"exact"},{"name":"increased protein localization to cell periphery during nitrogen depletion","type":"exact"},{"name":"increased protein localization to cell periphery during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0006535"}


id: PBO:0040957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 28","termid":"PBO:0040957"}


id: MONDO:0009399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperphosphatemia, polyuria, and seizures","secondary_identifiers":["UMLS:C1855922","OMIM:239350","MEDGEN:343444","MESH:C565494"],"synonyms":[{"name":"hyperphosphatemia, polyuria, and seizures","type":"exact"}],"termid":"MONDO:0009399","xrefs":{"Monarch":{"xref_id":"0009399"}}}


id: PR:Q7Z992
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sst6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q7Z992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT-I complex subunit vps23 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11H11.01","synonyms":[{"name":"Spom972h-sst6","type":"exact"},{"name":"suppressor of ste12 deletion protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q7Z992"}


id: GO:0010278
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein transport machinery of the chloroplast outer membrane that contains at least three components Toc159, Toc75 and Toc34, interacts with precursor proteins which are imported into the chloroplast in a GTP dependant manner.","definition_xrefs":["PMID:11299338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"chloroplast outer membrane","termid":"GO:0009707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"chloroplast outer membrane translocon","termid":"GO:0010278"}


id: MONDO:0023208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fuqua Berkovitz syndrome","termid":"MONDO:0023208","xrefs":{"Monarch":{"xref_id":"0023208"}}}


id: MONDO:0029138
data:
  {"annotated_genes":["SJAG_02316"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88153],"is_not":false,"summary":null,"term":"MONDO:0029138"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"genetic developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 67","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1648285","GARD:16295","UMLS:C4748341","OMIM:618141","DOID:0112203"],"synonyms":[{"name":"DEE67","type":"exact"},{"name":"EIEE67","type":"exact"},{"name":"developmental and epileptic encephalopathy 67","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 67","type":"exact"}],"termid":"MONDO:0029138","terms_by_termid":{"MONDO:0029138":null},"xrefs":{"Monarch":{"xref_id":"0029138"}}}


id: MONDO:0014174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any renal-hepatic-pancreatic dysplasia in which the cause of the disease is a mutation in the NEK8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal-hepatic-pancreatic dysplasia","termid":"MONDO:0017417"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal-hepatic-pancreatic dysplasia 2","secondary_identifiers":["GARD:18432","OMIM:615415","MEDGEN:815764","UMLS:C3809434"],"synonyms":[{"name":"NEK8 renal-hepatic-pancreatic dysplasia","type":"exact"},{"name":"RHPD2","type":"related"},{"name":"renal-hepatic-pancreatic dysplasia 2","type":"exact"},{"name":"renal-hepatic-pancreatic dysplasia caused by mutation in NEK8","type":"exact"},{"name":"renal-hepatic-pancreatic dysplasia type 2","type":"exact"}],"termid":"MONDO:0014174","xrefs":{"Monarch":{"xref_id":"0014174"}}}


id: PBO:0068991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 235, pseudogene","termid":"PBO:0068991"}


id: SO:0001300
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N6_isopentenyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_isopentenyladenosine","secondary_identifiers":["RNAMOD:006"],"synonyms":[{"name":"N6 isopentenyladenosine","type":"exact"},{"name":"N6-isopentenyladenosine","type":"exact"},{"name":"i6A","type":"exact"}],"termid":"SO:0001300"}


id: GO:0009004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of N-terminal leader sequences from secreted and periplasmic proteins precursor.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete signal peptidase I activity (obsolete GO:0009004)","synonyms":[{"name":"Escherichia coli leader peptidase","type":"narrow"},{"name":"HOSP","type":"related"},{"name":"PuIO prepilin peptidase","type":"narrow"},{"name":"SPC","type":"related"},{"name":"SPase I activity","type":"related"},{"name":"bacterial leader peptidase 1","type":"related"},{"name":"bacterial leader peptidase I activity","type":"narrow"},{"name":"eukaryotic signal peptidase","type":"narrow"},{"name":"eukaryotic signal proteinase","type":"narrow"},{"name":"leader peptidase I","type":"related"},{"name":"leader peptidase activity","type":"related"},{"name":"leader peptide hydrolase activity","type":"related"},{"name":"leader proteinase activity","type":"related"},{"name":"phage-procoat-leader peptidase activity","type":"narrow"},{"name":"pilin leader peptidase","type":"narrow"},{"name":"prokaryotic leader peptidase","type":"narrow"},{"name":"prokaryotic signal peptidase","type":"narrow"},{"name":"prokaryotic signal proteinase","type":"narrow"},{"name":"propeptidase activity","type":"related"},{"name":"signal peptidase I activity","type":"exact"},{"name":"signal peptide hydrolase activity","type":"related"},{"name":"signal proteinase activity","type":"related"},{"name":"signalase activity","type":"related"}],"termid":"GO:0009004"}


id: GO:0052897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N(8)-acetylspermidine + O2 = 1,3-diaminopropane + 4-acetamidobutanal + H2O2. Also active with N(1)-acetylspermine, weak activity with N(1),N(12)- diacetylspermine.","definition_xrefs":["EC:1.5.3.15","RHEA:25972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine oxidase activity","termid":"GO:0046592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N8-acetylspermidine:oxygen oxidoreductase (propane-1,3-diamine-forming) activity","secondary_identifiers":["MetaCyc:RXN-10463","KEGG_REACTION:R09075"],"synonyms":[{"name":"N(8)-acetylspermidine oxidase (propane-1,3-diamine-forming) activity","type":"broad"}],"termid":"GO:0052897"}


id: GO:0032912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of production of transforming growth factor-beta2.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transforming growth factor beta2 production","termid":"GO:0032909"},{"relation_name":"is_a","term_name":"negative regulation of transforming growth factor beta production","termid":"GO:0071635"},{"relation_name":"negatively_regulates","term_name":"transforming growth factor beta2 production","termid":"GO:0032906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of transforming growth factor beta2 production","synonyms":[{"name":"down regulation of transforming growth factor-beta2 production","type":"exact"},{"name":"down-regulation of transforming growth factor-beta2 production","type":"exact"},{"name":"downregulation of transforming growth factor-beta2 production","type":"exact"},{"name":"inhibition of transforming growth factor-beta2 production","type":"narrow"},{"name":"negative regulation of TGF-B2 production","type":"exact"},{"name":"negative regulation of TGFB2 production","type":"exact"},{"name":"negative regulation of transforming growth factor-beta2 production","type":"exact"}],"termid":"GO:0032912"}


id: PBO:0080882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YPEL5 pseudogene 2","termid":"PBO:0080882"}


id: MONDO:0001642
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hordeolum that results from obstruction and infection of an eyelash follicle and adjacent glands of Zeis or Moll glands. Follicle obstruction may be associated with blepharitis.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"blepharitis","termid":"MONDO:0004785"},{"relation_name":"is_a","term_name":"hordeolum","termid":"MONDO:0005800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093"],"is_obsolete":false,"name":"hordeolum externum","secondary_identifiers":["UMLS:C0019919","icd11.foundation:522397394","DOID:13134","SCTID:1489008","MEDGEN:5613","ICD9:373.11","ICD10CM:H00.01"],"synonyms":[{"name":"external stye","type":"exact"}],"termid":"MONDO:0001642","xrefs":{"Monarch":{"xref_id":"0001642"}}}


id: FYPO:0004335
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another does not occur during a cellular response to hydrogen peroxide. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PMID:22139357","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction during cellular response to rapamycin","termid":"FYPO:0003425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000702"],"is_obsolete":false,"name":"abolished protein-protein interaction during cellular response to hydrogen peroxide","synonyms":[{"name":"abolished protein binding cellular response to hydrogen peroxide","type":"exact"},{"name":"abolished protein-protein interaction during cellular response to H2O2","type":"exact"},{"name":"protein-protein interaction abolished during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0004335"}


id: GO:0070810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Hulle cell development, a process that leads to the formation of Hulle cells. Hulle cells are specialized multinucleate cells that originate from a nest-like aggregation of hyphae during sexual development and serve as nurse cells to the developing cleistothecium, or fruiting body.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of Hulle cell development","termid":"GO:0070808"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"Hulle cell development","termid":"GO:0070792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of Hulle cell development","termid":"GO:0070810"}


id: PBO:0065160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer associated non-coding RNA 1","termid":"PBO:0065160"}


id: PBO:0081632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 561","termid":"PBO:0081632"}


id: GO:0006314
data:
  {"annotated_genes":["SJAG_MIT07","SJAG_MIT05","SJAG_MIT06"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[120917,120924,120925],"is_not":false,"summary":null,"term":"GO:0006314"}]},"cv_name":"biological_process","definition":"Lateral transfer of an intron to a homologous allele that lacks the intron, mediated by a site-specific endonuclease encoded within the mobile intron.","definition_xrefs":["PMID:10487208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":3,"genes_by_uniquename":{"SJAG_MIT05":null,"SJAG_MIT06":null,"SJAG_MIT07":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006259"],"is_obsolete":false,"name":"intron homing","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006314","terms_by_termid":{"GO:0006314":null}}


id: PBO:0112905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-remodelling mannose-ethanolamine phosphate phosphodiesterase Ted2","termid":"PBO:0112905"}


id: FYPO:0005034
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins occurs to a lower extent than normal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation","termid":"FYPO:0002679"},{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during nitrogen starvation","termid":"FYPO:0005033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0002494","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein phosphorylation during nitrogen starvation","synonyms":[{"name":"decreased protein phosphorylation during cellular response to nitrogen starvation","type":"exact"},{"name":"decreased protein phosphorylation during nitrogen depletion","type":"exact"},{"name":"decreased protein phosphorylation during nitrogen deprivation","type":"exact"},{"name":"reduced protein phosphorylation during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005034"}


id: PBO:0038848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTS16 divergent transcript","termid":"PBO:0038848"}


id: PBO:0048437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate binding protein 1","termid":"PBO:0048437"}


id: GO:0003908
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: DNA (containing 6-O-methylguanine) + (protein)-L-cysteine = DNA (without 6-O-methylguanine) + protein S-methyl-L-cysteine.","definition_xrefs":["EC:2.1.1.63"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-methyltransferase activity","termid":"GO:0008172"},{"relation_name":"is_a","term_name":"protein methyltransferase activity","termid":"GO:0008276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0008276","GO:0016741","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"methylated-DNA-[protein]-cysteine S-methyltransferase activity","secondary_identifiers":["Reactome:R-HSA-73892","RHEA:24000","MetaCyc:2.1.1.63-RXN"],"synonyms":[{"name":"6-O-methylguanine-DNA methyltransferase activity","type":"related"},{"name":"DNA-6-O-methylguanine:[protein]-L-cysteine S-methyltransferase activity","type":"exact"},{"name":"DNA-6-O-methylguanine:protein-L-cysteine S-methyltransferase activity","type":"related"},{"name":"MGMT","type":"exact"},{"name":"O-6-methylguanine-DNA-alkyltransferase activity","type":"related"},{"name":"O6-alkylguanine-DNA alkyltransferase","type":"broad"},{"name":"methylated-DNA-protein-cysteine S-methyltransferase activity","type":"related"}],"termid":"GO:0003908"}


id: PBO:0073925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 16 member 13","termid":"PBO:0073925"}


id: FYPO:0002917
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 4 of histone H3 does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K4 methylation during vegetative growth","termid":"FYPO:0002330"},{"relation_name":"is_a","term_name":"abolished histone methylation during vegetative growth","termid":"FYPO:0002565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0002274","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished histone H3-K4 methylation during vegetative growth","synonyms":[{"name":"abolished histone H3 K4 methylation during vegetative growth","type":"exact"},{"name":"abolished histone H3-K4 methylation during mitotic cell cycle","type":"related"},{"name":"abolished histone H3K4me during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K4 methylation during vegetative growth","type":"exact"},{"name":"histone H3-K4 methylation abolished during vegetative growth","type":"exact"},{"name":"histone H3-K4 methylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0002917"}


id: MONDO:0021355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the esophagus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophageal disorder","termid":"MONDO:0003749"},{"relation_name":"is_a","term_name":"digestive system neoplasm","termid":"MONDO:0021223"},{"relation_name":"is_a","term_name":"neoplasm of thorax","termid":"MONDO:0021350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"neoplasm of esophagus","secondary_identifiers":["MEDGEN:4547","SCTID:126817006","UMLS:C0014859","NCIT:C3028"],"synonyms":[{"name":"esophageal neoplasm","type":"exact"},{"name":"esophageal neoplasms, benign and malignant","type":"exact"},{"name":"esophageal tumor","type":"exact"},{"name":"esophageal tumors","type":"exact"},{"name":"esophageal tumour","type":"exact"},{"name":"esophageal tumours","type":"exact"},{"name":"esophagus neoplasm","type":"exact"},{"name":"esophagus neoplasm (disease)","type":"exact"},{"name":"esophagus tumor","type":"exact"},{"name":"neoplasm of esophagus","type":"exact"},{"name":"neoplasm of the esophagus","type":"exact"},{"name":"neoplasm of the oesophagus","type":"exact"},{"name":"oesophagus neoplasm","type":"exact"},{"name":"oesophagus neoplasm (disease)","type":"exact"},{"name":"oesophagus tumour","type":"exact"},{"name":"tumor of esophagus","type":"exact"},{"name":"tumor of the esophagus","type":"exact"},{"name":"tumour of oesophagus","type":"exact"},{"name":"tumour of the oesophagus","type":"exact"}],"termid":"MONDO:0021355","xrefs":{"Monarch":{"xref_id":"0021355"}}}


id: PBO:0025533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-C ortholog Cnp3","termid":"PBO:0025533"}


id: PBO:0035977
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_acetylation_during_vegetative_growth","termid":"PBO:0035977"}


id: SO:0000814
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a region's ability, when introduced to a mutant organism, to re-establish (rescue) a phenotype.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rescue","termid":"SO:0000814"}


id: PBO:0002717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein kinase regulatory subunit Atg13","termid":"PBO:0002717"}


id: GO:0060273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The behavior in which an organism sheds tears, often accompanied by non-verbal vocalizations and in response to external or internal stimuli.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"crying behavior","termid":"GO:0060273"}


id: MONDO:0001284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Endometriosis that affects the intesines.","direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"},{"relation_name":"is_a","term_name":"endometriosis","termid":"MONDO:0005133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"endometriosis of intestine","secondary_identifiers":["MEDGEN:510251","DOID:11428","icd11.foundation:706777963","ICD9:617.5","SCTID:5562006","UMLS:C0156347","ICD10CM:N80.5"],"synonyms":[{"name":"endometriosis (disease) of intestine","type":"exact"},{"name":"intestine endometriosis (disease)","type":"exact"}],"termid":"MONDO:0001284","xrefs":{"Monarch":{"xref_id":"0001284"}}}


id: PBO:0029119
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mononucleate_cell_with_increased_DNA_content_during_stationary_phase","termid":"PBO:0029119"}


id: MONDO:0700230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any foveal hypoplasia with or without albinism caused by a variant in the GPR143 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"foveal hypoplasia","termid":"MONDO:0044203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPR143-related foveal hypoplasia","synonyms":[{"name":"GPR143-related foveal hypoplasia with or without albinism","type":"exact"}],"termid":"MONDO:0700230","xrefs":{"Monarch":{"xref_id":"0700230"}}}


id: PR:O13870
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- not3 gene.","definition_xrefs":["UniProtKB:O13870","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general negative regulator of transcription subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.05","synonyms":[{"name":"Spom972h-not3","type":"exact"}],"termid":"PR:O13870"}


id: PBO:0074185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 6","termid":"PBO:0074185"}


id: GO:0140608
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of a cysteine-type endopeptidase.","definition_xrefs":["PMID:32558991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase activator activity","termid":"GO:0061133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0140677","GO:0003674","GO:0098772","GO:0030234"],"is_obsolete":false,"name":"cysteine-type endopeptidase activator activity","synonyms":[{"name":"caspase activator activator activity","type":"narrow"}],"termid":"GO:0140608"}


id: MONDO:0021366
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the middle ear.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"middle ear disorder","termid":"MONDO:0003276"},{"relation_name":"is_a","term_name":"ear neoplasm","termid":"MONDO:0021233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplasm of middle ear","secondary_identifiers":["MEDGEN:87509","SCTID:127006003","UMLS:C0345617","NCIT:C4412","ICD9:239.89"],"synonyms":[{"name":"middle Ear neoplasm","type":"exact"},{"name":"middle Ear tumor","type":"exact"},{"name":"middle Ear tumour","type":"exact"},{"name":"middle ear neoplasm","type":"exact"},{"name":"middle ear neoplasm (disease)","type":"exact"},{"name":"middle ear tumor","type":"exact"},{"name":"middle ear tumour","type":"exact"},{"name":"neoplasm of middle ear","type":"exact"},{"name":"neoplasm of the middle Ear","type":"exact"},{"name":"tumor of middle Ear","type":"exact"},{"name":"tumor of middle ear","type":"exact"},{"name":"tumor of the middle Ear","type":"exact"},{"name":"tumour of middle Ear","type":"exact"},{"name":"tumour of middle ear","type":"exact"},{"name":"tumour of the middle Ear","type":"exact"}],"termid":"MONDO:0021366","xrefs":{"Monarch":{"xref_id":"0021366"}}}


id: GO:0090491
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalyzes the reaction: N-Hydroxy-L-tryptophan + Oxygen + NADPH + H+ = N,N-Dihydroxy-L-tryptophan + NADP+ + H2O.","definition_xrefs":["KEGG_REACTION:R09584"],"gene_count":0,"genotype_count":0,"name":"obsolete N-hydroxy-L-tryptophan,NADPH:oxygen oxidoreductase (N-hydroxylating) (obsolete GO:0090491)","termid":"GO:0090491"}


id: GO:0034910
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 6-hydroxy-3-succinoylpyridine + H2O = succinic semialdehyde + 2,5-dihydroxypyridine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 6-hydroxy-3-succinoylpyridine hydrolase activity (obsolete GO:0034910)","termid":"GO:0034910"}


id: GO:0003922
data:
  {"annotated_genes":["SJAG_04634","SJAG_00964"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95236],"is_not":false,"summary":null,"term":"GO:0003922"},{"annotations":[76450],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0003921"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + XMP + L-glutamine + H2O = AMP + diphosphate + GMP + L-glutamate + 2H+.","definition_xrefs":["RHEA:11680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","termid":"GO:0016884"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00964":null,"SJAG_04634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"GMP synthase (glutamine-hydrolyzing) activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9748957","Reactome:R-HSA-73792","EC:6.3.5.2","Wikipedia:GMP_synthase_(glutamine-hydrolysing)","MetaCyc:GMP-SYN-GLUT-RXN"],"synonyms":[{"name":"GMP synthase (glutamine-hydrolysing)","type":"related"},{"name":"GMP synthetase (glutamine-hydrolysing)","type":"related"},{"name":"GMP synthetase (glutamine-hydrolyzing) activity","type":"related"},{"name":"glutamine amidotransferase activity","type":"related"},{"name":"guanosine 5'-monophosphate synthetase activity","type":"related"},{"name":"guanosine monophosphate synthetase (glutamine-hydrolyzing)","type":"related"},{"name":"guanylate synthetase (glutamine-hydrolyzing)","type":"related"},{"name":"xanthosine 5'-phosphate amidotransferase activity","type":"related"},{"name":"xanthosine-5'-phosphate:L-glutamine amido-ligase (AMP-forming)","type":"related"}],"termid":"GO:0003922","terms_by_termid":{"GO:0003921":null,"GO:0003922":null}}


id: GO:1900509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of pentose catabolic process to ethanol.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of pentose catabolic process to ethanol (obsolete GO:1900509)","synonyms":[{"name":"regulation of pentose catabolism to ethanol","type":"exact"}],"termid":"GO:1900509"}


id: FYPO:0007412
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the orientation of the mitotic spindle is normal (i.e. indistinguishable from wild type, parallel with the long axis of the cell).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"},{"relation_name":"is_a","term_name":"normal spindle","termid":"FYPO:0004568"},{"relation_name":"part_of","term_name":"normal mitotic spindle","termid":"FYPO:0001399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic spindle orientation","termid":"FYPO:0007412"}


id: PBO:0042131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil glutamate rich protein 2","termid":"PBO:0042131"}


id: PBO:0038441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha and gamma adaptin binding protein","termid":"PBO:0038441"}


id: GO:0090347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the chemical reactions and pathways involving organohalogen compounds, as carried out by individual cells.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"organohalogen metabolic process","termid":"GO:0090345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of organohalogen metabolic process","termid":"GO:0090347"}


id: PBO:0040947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 18","termid":"PBO:0040947"}


id: PBO:0055566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3002","termid":"PBO:0055566"}


id: MONDO:0010292
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"FHL1-related myopathy","termid":"MONDO:0800462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"Uruguay Faciocardiomusculoskeletal syndrome","secondary_identifiers":["DOID:0112148","MEDGEN:335320","MESH:C564544","UMLS:C1846010","OMIM:300280"],"synonyms":[{"name":"FCMSU","type":"related"},{"name":"Fcms","type":"related"},{"name":"URUGUAY FACIOCARDIOMUSCULOSKELETAL syndrome","type":"related"},{"name":"Uruguay Faciocardiomusculoskeletal syndrome","type":"exact"},{"name":"faciocardiomusculoskeletal syndrome, Uruguay type","type":"related"},{"name":"uruguay faciocardiomusculoskeletal syndrome, X-linked recessive","type":"exact"}],"termid":"MONDO:0010292","xrefs":{"Monarch":{"xref_id":"0010292"}}}


id: GO:0061549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a sympathetic ganglion over time, from its formation to the mature structure.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ganglion development","termid":"GO:0061548"},{"relation_name":"part_of","term_name":"sympathetic nervous system development","termid":"GO:0048485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sympathetic ganglion development","synonyms":[{"name":"sympathetic ganglia development","type":"related"}],"termid":"GO:0061549"}


id: PBO:0052964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L1 cell adhesion molecule","termid":"PBO:0052964"}


id: GO:0102624
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + scutellarein 7-methyl ether = H+ + ladanein + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:73239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"scutellarein 7-methyl ether 4'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-15529"],"termid":"GO:0102624"}


id: PBO:0051514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IKAROS family zinc finger 4","termid":"PBO:0051514"}


id: MONDO:0015925
data:
  {"annotated_genes":["SJAG_03125","SJAG_05979","SJAG_02194","SJAG_03855","SJAG_01836","SJAG_00570","SJAG_03626","SJAG_00566","SJAG_02206","SJAG_02805"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010926"},{"annotations":[86833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800029"},{"annotations":[87990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011871"},{"annotations":[88354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957261"},{"annotations":[88353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957263"},{"annotations":[88119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957294"},{"annotations":[87950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013878"},{"annotations":[87074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014612"},{"annotations":[88939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030690"},{"annotations":[88861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100215"},{"annotations":[87647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100220"}]},"cv_name":"mondo","definition":"A diverse group of lung diseases that affect the lung parenchyma. They are characterized by an initial inflammation of pulmonary alveoli that extends to the interstitium and beyond leading to diffuse pulmonary fibrosis. Interstitial lung diseases are classified by their etiology (known or unknown causes), and radiological-pathological features.","definition_xrefs":["MESH:D017563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00566":null,"SJAG_00570":null,"SJAG_01836":null,"SJAG_02194":null,"SJAG_02206":null,"SJAG_02805":null,"SJAG_03125":null,"SJAG_03626":null,"SJAG_03855":null,"SJAG_05979":null},"genotype_count":0,"is_obsolete":false,"name":"interstitial lung disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MedDRA:10022611","NCIT:C164315","ICD10CM:J80-J84","Orphanet:182095","SCTID:233703007","DOID:3082","UMLS:C5441745","EFO:0004244","MEDGEN:1788738"],"synonyms":[{"name":"ILD","type":"exact"},{"name":"interstitial lung disease","type":"exact"}],"termid":"MONDO:0015925","terms_by_termid":{"MONDO:0010926":null,"MONDO:0011871":null,"MONDO:0013878":null,"MONDO:0014612":null,"MONDO:0030690":null,"MONDO:0100215":null,"MONDO:0100220":null,"MONDO:0800029":null,"MONDO:0957261":null,"MONDO:0957263":null,"MONDO:0957294":null},"xrefs":{"Monarch":{"xref_id":"0015925"}}}


id: PBO:0030859
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization","termid":"PBO:0030859"}


id: FYPO:0002781
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a greater extent than normal during a cellular response to nitric oxide. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000294","FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"increased transcription during cellular response to nitric oxide","synonyms":[{"name":"increased transcription during cellular response to NO during vegetative growth","type":"exact"},{"name":"increased transcription during cellular response to nitric oxide during mitotic cell cycle","type":"related"},{"name":"increased transcription during cellular response to nitric oxide during vegetative growth","type":"exact"},{"name":"increased transcription during cellular response to nitric oxide stress","type":"related"}],"termid":"FYPO:0002781"}


id: PBO:0042934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholesterol 25-hydroxylase","termid":"PBO:0042934"}


id: MONDO:0006066
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A variant of acinar prostate adenocarcinoma characterized by the presence of malignant cells with abundant xanthomatous appearing cytoplasm.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostatic acinar adenocarcinoma","termid":"MONDO:0002493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"acinar prostate adenocarcinoma, foamy gland variant","secondary_identifiers":["UMLS:C5787290","MEDGEN:1835068","NCIT:C39882","EFO:1000064"],"termid":"MONDO:0006066","xrefs":{"Monarch":{"xref_id":"0006066"}}}


id: GO:0060479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features of a mature cell found in the lung. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung cell differentiation","synonyms":[{"name":"pulmonary cell differentiation","type":"exact"}],"termid":"GO:0060479"}


id: PBO:0005495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP endonuclease Apn1","termid":"PBO:0005495"}


id: SO:0000083
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the macronuclei of ciliates.","direct_ancestors":[{"relation_name":"is_a","term_name":"organelle_sequence","termid":"SO:0000736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macronuclear_sequence","synonyms":[{"name":"macronuclear sequence","type":"exact"}],"termid":"SO:0000083"}


id: PR:Q9P4W7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An anaphase-promoting complex subunit 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC959.09c","secondary_identifiers":["UniProtKB:Q9P4W7"],"synonyms":[{"name":"20S cyclosome/APC complex protein apc5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ANAPC5","type":"exact"}],"termid":"PR:Q9P4W7"}


id: PBO:0076471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAF family member associated NFKB activator","termid":"PBO:0076471"}


id: GO:0034235
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a glycosylphosphatidylinositol anchor. GPI anchors serve to attach membrane proteins to the lipid bilayer of cell membranes.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol binding","termid":"GO:0035091"},{"relation_name":"is_a","term_name":"glycolipid binding","termid":"GO:0051861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"GPI anchor binding","synonyms":[{"name":"glycosylphosphatidylinositol binding","type":"exact"}],"termid":"GO:0034235"}


id: FYPO:0007213
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in one or more heterochromatin islands occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:29214404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation at heterochromatin island during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 dimethylation at heterochromatin island during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at heterochromatin island during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9 dimethylation at heterochromatin island during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me2 at heterochromatin island during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 dimethylation at heterochromatin island during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 dimethylation at heterochromatin island during vegetative growth","type":"exact"}],"termid":"FYPO:0007213"}


id: PBO:0055335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2763","termid":"PBO:0055335"}


id: PBO:0062182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily N member 3B pseudogene","termid":"PBO:0062182"}


id: GO:0075028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent symbiont appressorium initiation.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of appressorium initiation (obsolete GO:0075028)","synonyms":[{"name":"negative regulation of appressorium initiation on or near host","type":"related"},{"name":"negative regulation of initiation of appressorium on or near host","type":"exact"}],"termid":"GO:0075028"}


id: MONDO:0016473
data:
  {"annotated_genes":["SJAG_04213","SJAG_01111","SJAG_04755","SJAG_05313"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86968,86967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012252"},{"annotations":[89141,89142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013224"}]},"cv_name":"mondo","definition":"A neoplastic syndrome most often caused by mutations in the hSNF5/INI1 tumor suppressor gene. It is characterized by the development of an atypical teratoid/rhabdoid tumor in infancy and early childhood. This highly aggressive tumor develops in the central nervous system as an isolated lesion or in combination with extrarenal or renal rhabdoid tumor. Patients may also develop other central nervous system malignancies including medulloblastoma, supratentorial primitive neuroectodermal tumor, and choroid plexus carcinoma.","definition_xrefs":["NCIT:C93268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhabdoid tumor","termid":"MONDO:0002728"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01111":null,"SJAG_04213":null,"SJAG_04755":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"familial rhabdoid tumor","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:457750","GARD:17159","OMIMPS:609322","UMLS:C2985524","Orphanet:231108"],"synonyms":[{"name":"RTPS","type":"exact"},{"name":"familial posterior fossa brain tumor syndrome of infancy","type":"exact"},{"name":"familial posterior fossa brain tumour syndrome of infancy","type":"exact"},{"name":"familial rhabdoid tumor","type":"exact"},{"name":"hereditary rhabdoid tumor","type":"exact"},{"name":"hereditary rhabdoid tumour","type":"exact"},{"name":"rhabdoid predisposition syndrome","type":"exact"},{"name":"rhabdoid tumor predisposition syndrome","type":"exact"},{"name":"rhabdoid tumour predisposition syndrome","type":"exact"}],"termid":"MONDO:0016473","terms_by_termid":{"MONDO:0012252":null,"MONDO:0013224":null},"xrefs":{"Monarch":{"xref_id":"0016473"}}}


id: PBO:0067308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 394, pseudogene","termid":"PBO:0067308"}


id: PBO:0040005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 14 effector protein like","termid":"PBO:0040005"}


id: MONDO:0000968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare benign adipose tissue neoplasm of the kidney. It predominantly affects middle-aged females. It may originate from renal parenchymal fat or fat cells within the renal capsule. Clinical presentation includes hematuria and pain.","definition_xrefs":["NCIT:C5101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney benign neoplasm","termid":"MONDO:0002513"},{"relation_name":"is_a","term_name":"lipoma","termid":"MONDO:0005106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"kidney lipoma","secondary_identifiers":["MEDGEN:277588","DOID:10194","UMLS:C1335744"],"synonyms":[{"name":"kidney lipoma","type":"exact"},{"name":"lipoma of kidney","type":"exact"},{"name":"lipoma of the kidney","type":"exact"},{"name":"renal lipoma","type":"exact"}],"termid":"MONDO:0000968","xrefs":{"Monarch":{"xref_id":"0000968"}}}


id: GO:0003314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the heart rudiment are generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"},{"relation_name":"part_of","term_name":"heart rudiment development","termid":"GO:0003313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart rudiment morphogenesis","synonyms":[{"name":"heart cone morphogenesis","type":"exact"}],"termid":"GO:0003314"}


id: PBO:0039236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-aminolevulinate synthase 1","termid":"PBO:0039236"}


id: GO:0002263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in the morphology or behavior of a cell resulting from exposure to an activating factor such as a cellular or soluble ligand, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["GOC:add","GO_REF:0000022","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation","termid":"GO:0001775"},{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"},{"relation_name":"part_of","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell activation involved in immune response","synonyms":[{"name":"cell activation during immune response","type":"related"}],"termid":"GO:0002263"}


id: MONDO:0009403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertelorism and tetralogy of fallot","secondary_identifiers":["MEDGEN:344606","OMIM:239711","MESH:C538386","UMLS:C1855903"],"synonyms":[{"name":"hypertelorism and tetralogy of fallot","type":"exact"}],"termid":"MONDO:0009403","xrefs":{"Monarch":{"xref_id":"0009403"}}}


id: PBO:0060370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotilin","termid":"PBO:0060370"}


id: MONDO:0019120
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pili bifurcati is an uncommon transitory hair shaft dysplasia characterized by segmental duplication of the hair shaft: a ramification generates two parallel branches which fuse to form a single shaft again. Each branch is covered by its own cuticle.","definition_xrefs":["Orphanet:720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hair anomaly","termid":"MONDO:0019278"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pili bifurcati","secondary_identifiers":["UMLS:C5574653","icd11.foundation:674923489","GARD:18703","MEDGEN:1812698","SCTID:717360009"],"termid":"MONDO:0019120","xrefs":{"Monarch":{"xref_id":"0019120"}}}


id: PBO:0045581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine triphosphatase pseudogene 3","termid":"PBO:0045581"}


id: MONDO:0006273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A low grade fibromyxoid sarcoma characterized by the presence of prominent collagen rosettes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"low grade fibromyxoid sarcoma","termid":"MONDO:0006272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"low grade fibromyxoid sarcoma with giant collagen rosettes","secondary_identifiers":["MEDGEN:310942","UMLS:C1708749","NCIT:C45203","EFO:1000329"],"synonyms":[{"name":"hyalinizing spindle cell tumor with giant Rosettes","type":"exact"},{"name":"hyalinizing spindle cell tumour with giant Rosettes","type":"exact"}],"termid":"MONDO:0006273","xrefs":{"Monarch":{"xref_id":"0006273"}}}


id: GO:0004047
data:
  {"annotated_genes":["SJAG_02901"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57987],"is_not":false,"summary":null,"term":"GO:0004047"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N(6)-[(R)-S(8)-aminomethyldihydrolipoyl]-L-lysyl-[protein] + (6S)-5,6,7,8-tetrahydrofolate = N(6)-[(R)-dihydrolipoyl]-L-lysyl-[protein] + (6R)-5,10-methylene-5,6,7,8-tetrahydrofolate + NH4+.","definition_xrefs":["RHEA:16945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"aminomethyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["EC:2.1.2.10","MetaCyc:GCVT-RXN","Reactome:R-HSA-5693977"],"synonyms":[{"name":"S-aminomethyldihydrolipoylprotein:(6S)-tetrahydrofolate aminomethyltransferase (ammonia-forming) activity","type":"related"},{"name":"T-protein","type":"related"},{"name":"glycine synthase activity","type":"related"},{"name":"glycine-cleavage system T-protein activity","type":"related"},{"name":"protein-8-S-aminomethyldihydrolipoyllysine:tetrahydrofolate aminomethyltransferase (ammonia-forming) activity","type":"related"},{"name":"protein-S8-aminomethyldihydrolipoyllysine:tetrahydrofolate aminomethyltransferase (ammonia-forming) activity","type":"related"},{"name":"tetrahydrofolate aminomethyltransferase activity","type":"related"}],"termid":"GO:0004047","terms_by_termid":{"GO:0004047":null}}


id: MONDO:0000889
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections of the nervous system caused by bacteria of the genus haemophilus, and marked by prominent inflammation of the meninges. haemophilus influenzae type B is the most common causative organism. The condition primarily affects children under 6 years of age but may occur in adults.","definition_xrefs":["MESH:D008583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial meningitis","termid":"MONDO:0006670"},{"relation_name":"is_a","term_name":"haemophilus infectious disease","termid":"MONDO:0006926"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haemophilus meningitis","secondary_identifiers":["MedDRA:10018953","SCTID:192643004","SCTID:5900006","UMLS:C0025292","EFO:1000955","MEDGEN:7535","ICD9:320.0","DOID:0080179"],"synonyms":[{"name":"Haemophilus influenzae bacterial meningitis","type":"exact"},{"name":"Haemophilus influenzae caused bacterial meningitis","type":"exact"}],"termid":"MONDO:0000889","xrefs":{"Monarch":{"xref_id":"0000889"}}}


id: GO:2000504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of blood vessel remodeling.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tissue remodeling","termid":"GO:0034105"},{"relation_name":"is_a","term_name":"regulation of blood vessel remodeling","termid":"GO:0060312"},{"relation_name":"positively_regulates","term_name":"blood vessel remodeling","termid":"GO:0001974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood vessel remodeling","synonyms":[{"name":"positive regulation of blood vessel remodelling","type":"exact"}],"termid":"GO:2000504"}


id: PBO:0039086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP/GTP binding carboxypeptidase 1","termid":"PBO:0039086"}


id: PBO:0067884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 186","termid":"PBO:0067884"}


id: PBO:0059709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 17","termid":"PBO:0059709"}


id: MONDO:0003624
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A breast adenocarcinoma characterized by the presence of serous (acinic cell) differentiation.","definition_xrefs":["NCIT:C40367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"invasive ductal breast carcinoma","termid":"MONDO:0004953"},{"relation_name":"is_a","term_name":"acinar cell carcinoma","termid":"MONDO:0004965"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"acinic cell breast carcinoma","secondary_identifiers":["UMLS:C1515868","MEDGEN:272988","DOID:5743"],"synonyms":[{"name":"acinar cell breast carcinoma","type":"exact"},{"name":"acinic cell breast carcinoma","type":"exact"},{"name":"breast carcinoma of acinar cell","type":"exact"}],"termid":"MONDO:0003624","xrefs":{"Monarch":{"xref_id":"0003624"}}}


id: PBO:0001843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol-phosphate mannosyltransferase catalytic subunit Dpm1","termid":"PBO:0001843"}


id: GO:0080167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a karrikin stimulus. Karrikins are signaling molecules in smoke from burning vegetation that trigger seed germination for many angiosperms (flowering plants).","definition_xrefs":["PMID:20351290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to karrikin","termid":"GO:0080167"}


id: GO:1904083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of epiboly.","definition_xrefs":["PMID:24892953","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of epiboly (obsolete GO:1904083)","synonyms":[{"name":"regulation of epiboly","type":"exact"}],"termid":"GO:1904083"}


id: PATO:0002496
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed dorsolaterally.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dorsolateral orientation","synonyms":[{"name":"dorsolaterally directed","type":"exact"}],"termid":"PATO:0002496"}


id: PR:Q10133
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rho2 gene.","definition_xrefs":["UniProtKB:Q10133","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"GTP-binding protein rho2 (Schizosaccharomyces pombe)","termid":"PR:000050250"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein rho2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16.01","synonyms":[{"name":"Spom972h-rho2","type":"exact"}],"termid":"PR:Q10133"}


id: PBO:0055196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2621","termid":"PBO:0055196"}


id: PBO:0001356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U-box domain","termid":"PBO:0001356"}


id: MONDO:0018250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"diffuse palmoplantar keratoderma with painful fissures","secondary_identifiers":["MEDGEN:1660049","Orphanet:369999","GARD:17595","UMLS:C4755309"],"termid":"MONDO:0018250","xrefs":{"Monarch":{"xref_id":"0018250"}}}


id: MONDO:0010958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial long QT syndrome","termid":"MONDO:0019171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiac arrhythmia, ankyrin-B-related","secondary_identifiers":["DOID:0111700","DOID:0111701","GARD:10432","SCTID:764457005","MEDGEN:370181","OMIM:600919","UMLS:C1970119"],"synonyms":[{"name":"LQT4","type":"related"},{"name":"ankyrin-B syndrome","type":"exact"},{"name":"cardiac arrhythmia, ankyrin-b-related","type":"exact"}],"termid":"MONDO:0010958","xrefs":{"Monarch":{"xref_id":"0010958"}}}


id: GO:0030851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a myeloid precursor cell acquires the specialized features of a granulocyte. Granulocytes are a class of leukocytes characterized by the presence of granules in their cytoplasm. These cells are active in allergic immune reactions such as arthritic inflammation and rashes. This class includes basophils, eosinophils and neutrophils.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte differentiation","termid":"GO:0002573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"granulocyte differentiation","secondary_identifiers":["Reactome:R-HSA-9616222"],"synonyms":[{"name":"granulocyte cell differentiation","type":"exact"}],"termid":"GO:0030851"}


id: GO:0034748
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains Par3, the tumor suppressor protein adenomatous polyposis coli (APC), and the kinesin-related protein KIF3A; involved in establishing neuronal cell polarity.","definition_xrefs":["PMID:15556865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"Par3-APC-KIF3A complex","termid":"GO:0034748"}


id: PBO:0058863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9718","termid":"PBO:0058863"}


id: FYPO:0006243
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic chromosome condensation is abnormal over short (less than 90 kb) ranges within a chromosome arm.","definition_xrefs":["PomBase:mah","PMID:28825727"],"gene_count":0,"genotype_count":0,"name":"obsolete abnormal short range intra-arm mitotic chromosome condensation during interphase (obsolete FYPO:0006243)","synonyms":[{"name":"abnormal short range intra-arm chromosome condensation during interphase of mitotic cell cycle","type":"exact"},{"name":"abnormal short range intra-arm chromosome condensation during mitotic interphase","type":"exact"},{"name":"abnormal short range intra-arm mitotic chromosome condensation during interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0006243"}


id: MONDO:0019559
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic cutaneous lupus erythematosus","termid":"MONDO:0015574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"hypertrophic or verrucous lupus erythematosus","secondary_identifiers":["MEDGEN:698156","Orphanet:90282","GARD:19132","UMLS:C1274838"],"termid":"MONDO:0019559","xrefs":{"Monarch":{"xref_id":"0019559"}}}


id: FYPO:0005919
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to TOP-53. Cells stop growing (and may die) at a concentration of TOP-53 that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002683","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to TOP-53","synonyms":[{"name":"hypersensitive to TOP-53","type":"exact"},{"name":"sensitive to TOP-53 during mitotic cell cycle","type":"related"},{"name":"sensitive to TOP-53 during vegetative growth","type":"exact"}],"termid":"FYPO:0005919"}


id: MONDO:0700292
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bone benign neoplasm","termid":"MONDO:0000631"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desmoplastic fibroma","termid":"MONDO:0700292","xrefs":{"Monarch":{"xref_id":"0700292"}}}


id: GO:0009785
data:
  {"annotated_genes":["SJAG_02860"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67612],"is_not":false,"summary":null,"term":"GO:0009785"}]},"cv_name":"biological_process","definition":"The series of molecular signals initiated upon sensing of blue light by photoreceptor molecule, at a wavelength between 400nm and 470nm.","definition_xrefs":["GOC:lr","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular receptor signaling pathway","termid":"GO:0030522"},{"relation_name":"is_a","term_name":"cellular response to blue light","termid":"GO:0071483"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02860":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"blue light signaling pathway","references_by_uniquename":{"GO_REF:0000108":null},"synonyms":[{"name":"blue light signalling pathway","type":"exact"}],"termid":"GO:0009785","terms_by_termid":{"GO:0009785":null}}


id: MOD:01548
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Applied Biosystems iTRAQ8plex-115 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-115 reporter+balance reagent acylated residue","termid":"MOD:01542"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-115 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01548"}


id: MOD:01242
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 3x(2)H labeled L-glutamic acid 5-methyl ester.","definition_xrefs":["PubMed:1326520","Unimod:298#E","OMSSA:20"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"L-glutamic acid 5-methyl ester (Glu)","termid":"MOD:00081"},{"relation_name":"is_a","term_name":"3x(2)H residue methyl ester","termid":"MOD:00617"},{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3x(2)H labeled L-glutamic acid 5-methyl ester","synonyms":[{"name":"Methyl:2H(3)","type":"related"},{"name":"deuterated methyl ester","type":"related"},{"name":"trideuteromethyle","type":"exact"}],"termid":"MOD:01242"}


id: FYPO:0008005
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of reactive oxygen species (ROS) measured in a cell that is normal (i.e. indistinguishable from wild type) during stationary phase.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell","termid":"FYPO:0001076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal reactive oxygen species level during stationary phase","synonyms":[{"name":"normal ROS accumulation during stationary phase","type":"related"},{"name":"normal ROS level during stationary phase","type":"exact"},{"name":"normal ROS level in stationary phase","type":"exact"},{"name":"normal reactive oxygen species accumulation during stationary phase","type":"related"},{"name":"normal reactive oxygen species level in stationary phase","type":"exact"}],"termid":"FYPO:0008005"}


id: GO:0009708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of benzyl isoquinoline alkaloids, compounds with bicyclic N-containing aromatic rings.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoquinoline alkaloid biosynthetic process","termid":"GO:0033075"},{"relation_name":"is_a","term_name":"benzyl isoquinoline alkaloid metabolic process","termid":"GO:0046445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"benzyl isoquinoline alkaloid biosynthetic process","synonyms":[{"name":"benzyl isoquinoline alkaloid anabolism","type":"exact"},{"name":"benzyl isoquinoline alkaloid biosynthesis","type":"exact"},{"name":"benzyl isoquinoline alkaloid formation","type":"exact"},{"name":"benzyl isoquinoline alkaloid synthesis","type":"exact"}],"termid":"GO:0009708"}


id: GO:0047193
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: CDP-acylglycerol + arachidonyl-CoA = CDP-diacylglycerol + CoA.","definition_xrefs":["EC:2.3.1.70","MetaCyc:2.3.1.70-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete CDP-acylglycerol O-arachidonoyltransferase activity (obsolete GO:0047193)","synonyms":[{"name":"CDP-acylglycerol O-arachidonoyltransferase activity","type":"exact"},{"name":"CDP-acylglycerol O-arachidonyltransferase activity","type":"exact"},{"name":"CDPacylglycerol O-arachidonyltransferase activity","type":"related"},{"name":"arachidonoyl-CoA:CDP-acylglycerol O-arachidonoyltransferase activity","type":"related"},{"name":"arachidonyl-CoA:CDP-acylglycerol O-arachidonyltransferase activity","type":"related"}],"termid":"GO:0047193"}


id: PATO:0000480
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000480 positive regulation (obsolete PATO:0000480)","termid":"PATO:0000480"}


id: PBO:0061782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OCIA domain containing 2 pseudogene 1","termid":"PBO:0061782"}


id: MONDO:0003691
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymoma occurring in children.","definition_xrefs":["NCIT:C8097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant mesenchymoma","termid":"MONDO:0003633"},{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood malignant mesenchymoma","secondary_identifiers":["DOID:5893","UMLS:C0279991","MEDGEN:124688"],"synonyms":[{"name":"childhood malignant mesenchymoma","type":"exact"},{"name":"malignant mesenchymoma","type":"broad"},{"name":"malignant mesenchymoma of childhood","type":"exact"},{"name":"paediatric malignant mesenchymoma","type":"exact"},{"name":"pediatric malignant mesenchymoma","type":"exact"}],"termid":"MONDO:0003691","xrefs":{"Monarch":{"xref_id":"0003691"}}}


id: FYECO:0000094
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any series of two or more different sets of conditions used in a single experiment.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping condition combinations","termid":"FYECO:0000238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grouping sequential growth conditions","termid":"FYECO:0000094"}


id: GO:0005248
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a sodium ion by a voltage-gated channel. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium channel activity","termid":"GO:0005272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"voltage-gated sodium channel activity","secondary_identifiers":["Reactome:R-HSA-5576895"],"synonyms":[{"name":"voltage gated sodium channel activity","type":"exact"},{"name":"voltage-dependent sodium channel activity","type":"exact"},{"name":"voltage-gated sodium ion channel activity","type":"exact"},{"name":"voltage-sensitive sodium channel","type":"exact"}],"termid":"GO:0005248"}


id: MONDO:0010053
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary spherocytosis in which the cause of the disease is a mutation in the SPTA1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spherocytosis","termid":"MONDO:0019350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"hereditary spherocytosis type 3","secondary_identifiers":["MEDGEN:394798","UMLS:C2678338","GARD:15236","MESH:C567489","OMIM:270970","DOID:0110918"],"synonyms":[{"name":"HS3","type":"exact"},{"name":"SPH3","type":"exact"},{"name":"SPTA1 hereditary spherocytosis","type":"exact"},{"name":"hereditary spherocytosis 3","type":"exact"},{"name":"hereditary spherocytosis caused by mutation in SPTA1","type":"exact"},{"name":"spherocytosis, hereditary, 3","type":"related"},{"name":"spherocytosis, type 3","type":"related"}],"termid":"MONDO:0010053","xrefs":{"Monarch":{"xref_id":"0010053"}}}


id: GO:1990948
data:
  {"annotated_genes":["SJAG_01515","SJAG_04699"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100506,117422],"is_not":false,"summary":null,"term":"GO:1990948"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a ubiquitin ligase.","definition_xrefs":["GOC:vw","PMID:21389117","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-protein transferase inhibitor activity","termid":"GO:0055105"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01515":null,"SJAG_04699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0140678","GO:0003674","GO:0030234","GO:0098772","GO:0004857"],"is_obsolete":false,"name":"ubiquitin ligase inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0061637","GO:0090645"],"synonyms":[{"name":"APC-Cdc20 complex inhibitor activity","type":"narrow"},{"name":"mitotic anaphase-promoting complex inhibitor activity","type":"narrow"}],"termid":"GO:1990948","terms_by_termid":{"GO:1990948":null}}


id: MONDO:0009298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOMBO syndrome","secondary_identifiers":["MESH:C537284","UMLS:C1856274","OMIM:233270","MEDGEN:343515"],"synonyms":[{"name":"GOMBO syndrome","type":"exact"},{"name":"Growth retardation, ocular abnormalities, microcephaly, brachydactyly, and oligophrenia","type":"related"}],"termid":"MONDO:0009298","xrefs":{"Monarch":{"xref_id":"0009298"}}}


id: PBO:0079221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTBK2 antisense RNA 1","termid":"PBO:0079221"}


id: MONDO:0020369
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chandler syndrome, the most frequent clinical variant of iridocorneal endothelial (ICE) syndrome, is characterized by very few iris abnormalities but more severe corneal edema and less severe secondary glaucoma than seen in the other two ICE syndrome variants: Cogan-Reese syndrome and essential iris atrophy.","definition_xrefs":["Orphanet:98979"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corneal dystrophy","termid":"MONDO:0018102"},{"relation_name":"is_a","term_name":"iridocorneal endothelial syndrome","termid":"MONDO:0018988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Chandler syndrome","secondary_identifiers":["MedDRA:10057487","NORD:918","GARD:6033","icd11.foundation:806443940","DOID:11554","SCTID:416960004","UMLS:C0544008","MEDGEN:107777","ICD9:371.57"],"synonyms":[{"name":"Chandler's Syndrome","type":"exact"},{"name":"Chandler's syndrome","type":"exact"},{"name":"dystrophy of corneal endothelium","type":"exact"},{"name":"endothelial corneal dystrophy","type":"exact"},{"name":"posterior membrane corneal dystrophy","type":"exact"}],"termid":"MONDO:0020369","xrefs":{"Monarch":{"xref_id":"0020369"}}}


id: PBO:0042103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 175","termid":"PBO:0042103"}


id: FYPO:0001585
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell tip is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip during vegetative growth","termid":"FYPO:0001584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to cell tip during vegetative growth","synonyms":[{"name":"abolished protein localisation to cell tip during vegetative growth","type":"exact"},{"name":"abolished protein localization to cell end during vegetative growth","type":"exact"},{"name":"abolished protein localization to cell tip during mitotic cell cycle","type":"related"},{"name":"protein localization to cell tip abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0001585"}


id: PBO:0000010
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-localization_dependency","termid":"PBO:0000010"}


id: GO:0102719
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: eugenol + S-adenosyl-L-methionine = H+ + O-methyleugenol + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete S-adenosyl-L-methionine:eugenol-O-methyltransferase activity (obsolete GO:0102719)","termid":"GO:0102719"}


id: GO:0018304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron into a 4Fe-4S iron-sulfur cluster via tris-L-cysteinyl-L-aspartato tetrairon tetrasulfide.","definition_xrefs":["RESID:AA0286"],"gene_count":0,"genotype_count":0,"name":"obsolete iron incorporation into iron-sulfur cluster via tris-L-cysteinyl-L-aspartato tetrairon tetrasulfide (obsolete GO:0018304)","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via tris-L-cysteinyl-L-aspartato tetrairon tetrasulphide","type":"exact"}],"termid":"GO:0018304"}


id: PBO:0075742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 68 pseudogene 1","termid":"PBO:0075742"}


id: MONDO:0005833
data:
  {"annotated_genes":["SJAG_00993","SJAG_01407","SJAG_02648","SJAG_00570","SJAG_02453","SJAG_02923","SJAG_01697","SJAG_01181","SJAG_02572","SJAG_03536","SJAG_02342","SJAG_03453","SJAG_04745"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012146"},{"annotations":[87458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011336"},{"annotations":[88414],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013135"},{"annotations":[87764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011997"},{"annotations":[88264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007918"},{"annotations":[88116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011257"},{"annotations":[88721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009756"},{"annotations":[87990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011871"},{"annotations":[87983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011873"},{"annotations":[89074,89075,89076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008104"},{"annotations":[87558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033669"},{"annotations":[88441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012371"},{"annotations":[88232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013186"}]},"cv_name":"mondo","definition":"A disease involving the lymphatic part of lymphoid system.","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoid system disorder","termid":"MONDO:0044986"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00570":null,"SJAG_00993":null,"SJAG_01181":null,"SJAG_01407":null,"SJAG_01697":null,"SJAG_02342":null,"SJAG_02453":null,"SJAG_02572":null,"SJAG_02648":null,"SJAG_02923":null,"SJAG_03453":null,"SJAG_03536":null,"SJAG_04745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphatic system disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C50764","MEDGEN:892707","EFO:0007352","MESH:D008206","SCTID:362971004","DOID:75","UMLS:C4021976"],"synonyms":[{"name":"adenopathy","type":"related"},{"name":"disease of lymphatic part of lymphoid system","type":"exact"},{"name":"disease of lympoid system","type":"related"},{"name":"disease or disorder of lymphatic part of lymphoid system","type":"exact"},{"name":"disorder of lymph node and lymphatics","type":"exact"},{"name":"disorder of lymphatic part of lymphoid system","type":"exact"},{"name":"disorder of lymphatic system","type":"exact"},{"name":"disorder of lymphoid system","type":"related"},{"name":"glands, swollen","type":"exact"},{"name":"lymphadenopathy","type":"narrow"},{"name":"lymphangiopathy","type":"narrow"},{"name":"lymphatic disease","type":"exact"},{"name":"lymphatic disorder","type":"exact"},{"name":"lymphatic part of lymphoid system disease","type":"exact"},{"name":"lymphatic part of lymphoid system disease or disorder","type":"exact"},{"name":"lympoid system disease","type":"related"},{"name":"swollen gland","type":"exact"},{"name":"swollen glands","type":"exact"}],"termid":"MONDO:0005833","terms_by_termid":{"MONDO:0007918":null,"MONDO:0008104":null,"MONDO:0009756":null,"MONDO:0011257":null,"MONDO:0011336":null,"MONDO:0011871":null,"MONDO:0011873":null,"MONDO:0011997":null,"MONDO:0012146":null,"MONDO:0012371":null,"MONDO:0013135":null,"MONDO:0013186":null,"MONDO:0033669":null},"xrefs":{"Monarch":{"xref_id":"0005833"}}}


id: PBO:0066564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid domain containing 3","termid":"PBO:0066564"}


id: GO:1990261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the unspliced pre-mRNA (pre-messenger RNA).","definition_xrefs":["GOC:rb","PMID:22844259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA catabolic process","termid":"GO:0006401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pre-mRNA catabolic process","synonyms":[{"name":"pre-mRNA decay","type":"exact"},{"name":"unspliced RNA decay","type":"exact"}],"termid":"GO:1990261"}


id: GO:0034490
data:
  {"annotated_genes":["SJAG_03256","SJAG_00877","SJAG_02029","SJAG_04725"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96405],"is_not":false,"summary":null,"term":"GO:0034490"},{"annotations":[105648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090518"},{"annotations":[105651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"},{"annotations":[105652,111873,104623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090517"}]},"cv_name":"biological_process","definition":"The directed movement of basic amino acids into the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane import into vacuole","termid":"GO:0032975"},{"relation_name":"is_a","term_name":"basic amino acid transmembrane transport","termid":"GO:1990822"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00877":null,"SJAG_02029":null,"SJAG_03256":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"basic amino acid transmembrane import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034490","terms_by_termid":{"GO:0034490":null,"GO:0090513":null,"GO:0090517":null,"GO:0090518":null}}


id: GO:0034051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the hypersensitive response in a plant.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plant-type hypersensitive response","termid":"GO:0010363"},{"relation_name":"is_a","term_name":"negative regulation of programmed cell death","termid":"GO:0043069"},{"relation_name":"is_a","term_name":"negative regulation of innate immune response","termid":"GO:0045824"},{"relation_name":"negatively_regulates","term_name":"plant-type hypersensitive response","termid":"GO:0009626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of plant-type hypersensitive response","synonyms":[{"name":"down regulation of plant-type hypersensitive response","type":"exact"},{"name":"down-regulation of plant-type hypersensitive response","type":"exact"},{"name":"downregulation of plant-type hypersensitive response","type":"exact"},{"name":"inhibition of plant-type hypersensitive response","type":"narrow"},{"name":"negative regulation of HR","type":"exact"},{"name":"negative regulation of HR-PCD","type":"exact"},{"name":"negative regulation of plant hypersensitive response","type":"exact"}],"termid":"GO:0034051"}


id: MONDO:0015530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A headache disorder characterized by episodes of unilateral, short lasting pain and associated ipsilateral cranial autonomic symptoms.","definition_xrefs":["NCIT:C117074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trigeminal nerve disorder","termid":"MONDO:0003543"},{"relation_name":"is_a","term_name":"hypnic headache","termid":"MONDO:0017181"},{"relation_name":"is_a","term_name":"neurovascular disorder","termid":"MONDO:0043218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trigeminal autonomic cephalalgia","secondary_identifiers":["Orphanet:157843","SCTID:449814007","icd11.foundation:607078588","ICD9:339.09","MESH:D051303","GARD:20017","MEDGEN:327950","UMLS:C1565172"],"termid":"MONDO:0015530","xrefs":{"Monarch":{"xref_id":"0015530"}}}


id: PBO:0003741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein Klp5","termid":"PBO:0003741"}


id: GO:0048246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a macrophage in response to an external stimulus.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte chemotaxis","termid":"GO:0030595"},{"relation_name":"is_a","term_name":"macrophage migration","termid":"GO:1905517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macrophage chemotaxis","termid":"GO:0048246"}


id: GO:0050652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The elongation of dermatan sulfate proteoglycan chains by alternate addition of N-acetylhexosamine and GlcUA residues to the GAG-protein linkage region tetrasaccharide of dermatan sulfate.","definition_xrefs":["GOC:ai","PMID:11788602"],"gene_count":0,"genotype_count":0,"name":"obsolete dermatan sulfate proteoglycan biosynthetic process, chain elongation (obsolete GO:0050652)","synonyms":[{"name":"chondroitin sulfate B proteoglycan biosynthesis, polysaccharide chain biosynthesis","type":"exact"},{"name":"chondroitin sulfate B proteoglycan biosynthesis, polysaccharide chain biosynthetic process","type":"exact"},{"name":"chondroitin sulfate B proteoglycan chain elongation","type":"exact"},{"name":"dermatan sulfate proteoglycan anabolism, polysaccharide chain anabolism","type":"exact"},{"name":"dermatan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process","type":"exact"},{"name":"dermatan sulfate proteoglycan chain elongation","type":"exact"},{"name":"dermatan sulfate proteoglycan formation, polysaccharide chain biosynthesis","type":"exact"},{"name":"dermatan sulfate proteoglycan formation, polysaccharide chain formation","type":"exact"},{"name":"dermatan sulfate proteoglycan synthesis, polysaccharide chain synthesis","type":"exact"},{"name":"dermatan sulphate proteoglycan biosynthesis, polysaccharide chain biosynthesis","type":"exact"},{"name":"dermatan sulphate proteoglycan biosynthesis, polysaccharide chain biosynthetic process","type":"exact"}],"termid":"GO:0050652"}


id: GO:0017009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The linkage of the chromophore phycocyanobilin to phycocyanin or allophycocyanin.","definition_xrefs":["RESID:AA0131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-bilin linkage","termid":"GO:0017007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-phycocyanobilin linkage","termid":"GO:0017009"}


id: PBO:0061449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 4 group A member 1","termid":"PBO:0061449"}


id: PR:O59855
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssa2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein ssa2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.13","synonyms":[{"name":"Spom972h-ssa2","type":"exact"}],"termid":"PR:O59855"}


id: SO:0001224
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is silenced by RNA interference.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"silenced_by_RNA_interference","termid":"SO:0001220"},{"relation_name":"is_a","term_name":"silenced_gene","termid":"SO:0000127"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_silenced_by_RNA_interference","synonyms":[{"name":"RNA interference silenced gene","type":"exact"},{"name":"RNAi silenced gene","type":"exact"},{"name":"gene silenced by RNA interference","type":"exact"}],"termid":"SO:0001224"}


id: GO:0090220
data:
  {"annotated_genes":["SJAG_03092","SJAG_01263","SJAG_01538","SJAG_03287","SJAG_05226","SJAG_03680","SJAG_03685","SJAG_01777","SJAG_00756","SJAG_05260","SJAG_05196"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65551,91579],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070197"},{"annotations":[104640,101742,89209,106934,91580],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032121"},{"annotations":[117803,98529,119422,119560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045141"},{"annotations":[115844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044821"}]},"cv_name":"biological_process","definition":"The directed movement of a chromosome to the nuclear envelope that contributes to homologous chromosome segregation and precedes synapsis.","definition_xrefs":["GOC:ascb_2009","PMID:19913287","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome localization","termid":"GO:0050000"},{"relation_name":"part_of","term_name":"homologous chromosome segregation","termid":"GO:0045143"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00756":null,"SJAG_01263":null,"SJAG_01538":null,"SJAG_01777":null,"SJAG_03092":null,"SJAG_03287":null,"SJAG_03680":null,"SJAG_03685":null,"SJAG_05196":null,"SJAG_05226":null,"SJAG_05260":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0140013","GO:0008150","GO:0007049","GO:0051179"],"is_obsolete":false,"name":"chromosome localization to nuclear envelope involved in homologous chromosome segregation","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"chromosome localisation to nuclear envelope involved in homologous chromosome segregation","type":"exact"}],"termid":"GO:0090220","terms_by_termid":{"GO:0032121":null,"GO:0044821":null,"GO:0045141":null,"GO:0070197":null}}


id: GO:0052373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism stops, prevents, or reduces the frequency, rate or extent to which it enters into a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response to symbiont","termid":"GO:0140546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"suppression of symbiont entry into host","synonyms":[{"name":"down regulation by organism of entry into other organism during symbiotic interaction","type":"related"},{"name":"down-regulation by organism of entry into other organism during symbiotic interaction","type":"related"},{"name":"downregulation by organism of entry into other organism during symbiotic interaction","type":"related"},{"name":"inhibition by organism of entry into other organism during symbiotic interaction","type":"narrow"},{"name":"negative regulation by organism of entry into other organism during symbiotic interaction","type":"related"},{"name":"negative regulation by organism of entry into other organism involved in symbiotic interaction","type":"broad"},{"name":"suppression of symbiont entry into host by host","type":"exact"}],"termid":"GO:0052373"}


id: PBO:0068577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 28, pseudogene","termid":"PBO:0068577"}


id: PBO:0065301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 8","termid":"PBO:0065301"}


id: MONDO:0012078
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Joubert syndrome in which the cause of the disease is a mutation in the AHI1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome with ocular defect","termid":"MONDO:0016364"},{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0020022","MONDO:0006025"],"is_obsolete":false,"name":"Joubert syndrome 3","secondary_identifiers":["DOID:0110998","NCIT:C148259","MEDGEN:332931","MESH:C536295","OMIM:608629","GARD:15435","UMLS:C1837713"],"synonyms":[{"name":"AHI1 Joubert syndrome","type":"exact"},{"name":"JBTS3","type":"exact"},{"name":"Joubert syndrome 3","type":"exact"},{"name":"Joubert syndrome caused by mutation in AHI1","type":"exact"},{"name":"Joubert syndrome type 3","type":"exact"}],"termid":"MONDO:0012078","xrefs":{"Monarch":{"xref_id":"0012078"}}}


id: GO:0032890
data:
  {"annotated_genes":["SJAG_00991","SJAG_05346","SJAG_02605","SJAG_03591","SJAG_03970","SJAG_04920"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905533"},{"annotations":[91742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035432"},{"annotations":[95141,100692,112389,93559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"},{"annotations":[93560,100693,95142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"},{"annotations":[95143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of organic acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"organic acid transport","termid":"GO:0015849"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_03970":null,"SJAG_04920":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of organic acid transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032890","terms_by_termid":{"GO:0035432":null,"GO:1905533":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null}}


id: MONDO:0034895
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare syndromic esophageal malformation characterized by severe congenital brachyesophagus with midline diaphragmatic hernia and secondary intrathoracic stomach, and vertebral anomalies (in particular rachischisis of the cervical/thoracic spine). Additional reported manifestations include intrauterine growth restriction, short neck, intestinal malrotation, herniation of other abdominal organs, and cleft lip, among others. The condition is mostly fatal in the neonatal or early infantile period.","definition_xrefs":["Orphanet:514352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital brachyesophagus-intrathoracic stomach-vertebral anomalies syndrome","secondary_identifiers":["UMLS:C5680208","GARD:22076","MEDGEN:1807957"],"synonyms":[{"name":"serpentine-like syndrome","type":"exact"}],"termid":"MONDO:0034895","xrefs":{"Monarch":{"xref_id":"0034895"}}}


id: PBO:0017468
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-formed_as_result_of","termid":"PBO:0017468"}


id: SO:0000348
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence consisting of nucleobases bound to repeating units. The forms found in nature are deoxyribonucleic acid (DNA), where the repeating units are 2-deoxy-D-ribose rings connected to a phosphate backbone, and ribonucleic acid (RNA), where the repeating units are D-ribose rings connected to a phosphate backbone.","definition_xrefs":["RSC:cb","CHEBI:33696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polymer_attribute","termid":"SO:0000443"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleic_acid","secondary_identifiers":["http://en.wikipedia.org/wiki/Nucleic_acid"],"synonyms":[{"name":"nucleic acid","type":"exact"}],"termid":"SO:0000348"}


id: GO:0044836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The anaerobic enzymatic conversion of D-xylose to ethanol, yielding energy in the form of ATP.","definition_xrefs":["GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete D-xylose fermentation (obsolete GO:0044836)","termid":"GO:0044836"}


id: PBO:0040993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bolA family member 2 pseudogene 3","termid":"PBO:0040993"}


id: PBO:0078290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 23-1","termid":"PBO:0078290"}


id: PBO:0028213
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphorylation_during_cellular_response_to_arsenic-containing_substance","termid":"PBO:0028213"}


id: GO:0044558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which the extent of smooth muscle contraction is reduced in the uterus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"relaxation of smooth muscle","termid":"GO:0044557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"uterine smooth muscle relaxation","synonyms":[{"name":"smooth muscle relaxation of the uterus","type":"exact"}],"termid":"GO:0044558"}


id: PBO:0087234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sensor-transducer of the stress-activated PKC1-MPK1 signaling pathway; involved in maintenance of cell wall integrity and recovery from heat shock; required for the arrest of secretion response; WSC2 has a paralog, WSC3, that arose from the whole genome duplication","termid":"PBO:0087234"}


id: MONDO:0043224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A common form of dementia caused by multiple cortical or subcortical cerebral infarctions.","definition_xrefs":["NCIT:C34522"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral infarction","termid":"MONDO:0002679"},{"relation_name":"is_a","term_name":"vascular dementia","termid":"MONDO:0004648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"multi-infarct dementia","secondary_identifiers":["UMLS:C0011263","icd11.foundation:645643099","MESH:D015161","SCTID:56267009","MEDGEN:8277"],"synonyms":[{"name":"Binswanger disease","type":"related"},{"name":"Binswanger's disease","type":"related"},{"name":"Dementias, Multiinfarct","type":"related"},{"name":"Dementias, lacunar","type":"related"},{"name":"Dementias, multi-infarct","type":"related"},{"name":"Multiinfarct Dementias","type":"related"},{"name":"Multiinfarct dementia","type":"related"},{"name":"arteriosclerotic dementia","type":"related"},{"name":"dementia multi infarct","type":"related"},{"name":"dementia multi-infarct","type":"related"},{"name":"dementia multi-infarcts","type":"related"},{"name":"dementia, Multiinfarct","type":"related"},{"name":"dementia, lacunar","type":"related"},{"name":"dementia, multi infarct","type":"related"},{"name":"lacunar Dementias","type":"related"},{"name":"lacunar dementia","type":"related"},{"name":"multi infarct dementia","type":"exact"},{"name":"multi-infarct Dementias","type":"related"},{"name":"multi-infarct dementia","type":"exact"},{"name":"multi-infarct, dementia","type":"related"},{"name":"multi-infarcts, dementia","type":"related"}],"termid":"MONDO:0043224","xrefs":{"Monarch":{"xref_id":"0043224"}}}


id: PBO:0027822
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_single-stranded_DNA_binding","termid":"PBO:0027822"}


id: FYPO:0005537
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomerase holoenzyme complex assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal telomerase holoenzyme complex assembly","synonyms":[{"name":"normal telomerase holoenzyme complex assembly during mitotic cell cycle","type":"related"},{"name":"normal telomerase holoenzyme complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0005537"}


id: PBO:0038324
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malacards_disease_slug","termid":"PBO:0038324"}


id: PBO:0002178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YjeF family pyridoxamine-phosphate oxidase (predicted)","termid":"PBO:0002178"}


id: GO:0003945
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-galactose + N-acetyl-D-glucosamine = UDP + N-acetyllactosamine.","definition_xrefs":["EC:2.4.1.90"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"N-acetyllactosamine synthase activity","secondary_identifiers":["MetaCyc:N-ACETYLLACTOSAMINE-SYNTHASE-RXN","RHEA:17745"],"synonyms":[{"name":"Gal-T","type":"related"},{"name":"N-acetylglucosamine (beta-1,4)galactosyltransferase activity","type":"related"},{"name":"N-acetylglucosamine beta-(1,4)-galactosyltransferase activity","type":"related"},{"name":"N-acetyllactosamine synthetase activity","type":"related"},{"name":"NAL synthetase activity","type":"related"},{"name":"UDP-Gal:N-acetylglucosamine beta-1,4-galactosyltransferase activity","type":"related"},{"name":"UDP-beta-1,4-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose N-acetylglucosamine beta-4-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose-N-acetylglucosamine beta-1,4-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose-N-acetylglucosamine beta-D-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose-N-acetylglucosamine galactosyltransferase activity","type":"related"},{"name":"UDP-galactose-acetylglucosamine galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:N-acetyl-D-glucosamine 4-beta-D-galactosyltransferase activity","type":"exact"},{"name":"UDP-galactose:N-acetylglucosaminide beta-1,4-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose-N-acetylglucosamine beta-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:N-acetyl-D-glucosamine 4-beta-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:N-acetylglucosaminyl(beta-1,4)galactosyltransferase activity","type":"related"},{"name":"acetyllactosamine synthetase activity","type":"related"},{"name":"beta-(1,4)-galactosyltransferase activity","type":"related"},{"name":"beta-1,4-GalT","type":"related"},{"name":"beta-1,4-galactosyltransferase activity","type":"related"},{"name":"beta-N-acetylglucosaminide beta-1,4-galactosyltransferase activity","type":"related"},{"name":"lactosamine synthase activity","type":"related"},{"name":"lactosamine synthetase activity","type":"related"},{"name":"lactose synthetase A protein","type":"related"},{"name":"uridine diphosphogalactose-acetylglucosamine galactosyltransferase activity","type":"related"}],"termid":"GO:0003945"}


id: MONDO:0022926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete daentl towsend Siegel syndrome (obsolete MONDO:0022926)","termid":"MONDO:0022926","xrefs":{"Monarch":{"xref_id":"0022926"}}}


id: MONDO:0018069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal trisomy 17q is a rare chromosomal anomaly syndrome with variable phenotype principally characterized by intellectual disability, developmental delay, short stature, craniofacial dysmorphism (incl. microcephaly, low posterior hairline, frontal bossing, bitemporal narrowing, low-set and malformed ears, flat nasal bridge, long philtrum, wide mouth with downturned corners, thin upper lip) and a short, webbed neck, as well as skeletal anomalies (e.g. brachyrhizomelia, poly-/syndactyly) and joint hyperlaxity. Cardiac, cerebral, and urogenital anomalies are also frequently associated.","definition_xrefs":["Orphanet:3379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 17","termid":"MONDO:0016967"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal trisomy 17q","secondary_identifiers":["SCTID:766051001","GARD:18794","MEDGEN:1635674","UMLS:C4707663"],"synonyms":[{"name":"distal duplication 17q","type":"exact"},{"name":"distal trisomy type 17q","type":"exact"},{"name":"telomeric duplication 17q","type":"exact"},{"name":"trisomy 17qter","type":"exact"}],"termid":"MONDO:0018069","xrefs":{"Monarch":{"xref_id":"0018069"}}}


id: FYPO:0003254
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of arginine into the cell is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished amino acid import during vegetative growth","termid":"FYPO:0003253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abolished arginine import","synonyms":[{"name":"abolished L-arginine import across plasma membrane","type":"exact"},{"name":"abolished L-arginine import into cell","type":"exact"},{"name":"abolished arginine import during mitotic cell cycle","type":"related"},{"name":"abolished arginine import during vegetative growth","type":"exact"},{"name":"abolished arginine import into cell","type":"exact"},{"name":"abolished arginine uptake","type":"exact"},{"name":"arginine import abolished","type":"exact"}],"termid":"FYPO:0003254"}


id: GO:0044164
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of the host cell cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell cytosol","synonyms":[{"name":"host cytosol","type":"exact"}],"termid":"GO:0044164"}


id: PBO:0054993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2408","termid":"PBO:0054993"}


id: GO:0050320
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tartrate = (2R,3S)-tartrate.","definition_xrefs":["EC:5.1.2.5","RHEA:22212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on hydroxy acids and derivatives","termid":"GO:0016856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"tartrate epimerase activity","secondary_identifiers":["KEGG_REACTION:R02546","MetaCyc:TARTRATE-EPIMERASE-RXN"],"synonyms":[{"name":"tartaric racemase activity","type":"related"}],"termid":"GO:0050320"}


id: GO:0080149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate of translation as a result of increase in sucrose level.","definition_xrefs":["PMID:19403731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation in response to stress","termid":"GO:0032055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"sucrose induced translational repression","synonyms":[{"name":"negative regulation of translation in response to sucrose","type":"exact"}],"termid":"GO:0080149"}


id: FYPO:0001604
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in the cytosol differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"altered level of substance in cytosol","synonyms":[{"name":"abnormal cytosolic level of substance","type":"exact"},{"name":"abnormal level of substance in cytosol","type":"exact"},{"name":"abnormal level of substance in cytosol during vegetative growth","type":"exact"},{"name":"altered cytosolic level of substance","type":"exact"},{"name":"altered level of substance in cytosol during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001604"}


id: MONDO:0006063
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete carbohydrate metabolic disorder (obsolete MONDO:0006063)","termid":"MONDO:0006063","xrefs":{"Monarch":{"xref_id":"0006063"}}}


id: PBO:0080233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VLDLR antisense RNA 1","termid":"PBO:0080233"}


id: PBO:0004940
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of PIm","termid":"PBO:0004940"}


id: MONDO:0008304
data:
  {"annotated_genes":["SJAG_04699","SJAG_01082"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87761,87762],"is_not":false,"summary":null,"term":"MONDO:0008304"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01082":null,"SJAG_04699":null},"genotype_count":0,"is_obsolete":false,"name":"premature chromatid separation trait","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:400517","OMIM:176430","UMLS:C1864389"],"synonyms":[{"name":"PCS","type":"related"},{"name":"premature chromatid separation trait","type":"exact"},{"name":"total premature chromatid separation trait","type":"related"}],"termid":"MONDO:0008304","terms_by_termid":{"MONDO:0008304":null},"xrefs":{"Monarch":{"xref_id":"0008304"}}}


id: SO:1000145
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A ring chromosome which is a copy of another chromosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"free","termid":"SO:0001516"},{"relation_name":"is_a","term_name":"ring_chromosome","termid":"SO:1000045"},{"relation_name":"is_a","term_name":"free_duplication","termid":"SO:1000144"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"free_ring_duplication","synonyms":[{"name":"(Drosophila)R","type":"related"},{"name":"free ring duplication","type":"exact"}],"termid":"SO:1000145"}


id: PBO:0053010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LAMP5 antisense RNA 1","termid":"PBO:0053010"}


id: PBO:0054280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1671","termid":"PBO:0054280"}


id: PBO:0074584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 2C","termid":"PBO:0074584"}


id: MONDO:0020500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Marburg hemorrhagic fever (MHF), caused by Marburg virus, is a severe viral hemorrhagic disease characterized by initial fever and malaise followed by gastrointestinal symptoms, bleeding, shock, and multi-organ system failure.","definition_xrefs":["Orphanet:99826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Filoviridae infectious disease","termid":"MONDO:0005762"},{"relation_name":"is_a","term_name":"viral hemorrhagic fever","termid":"MONDO:0018087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Marburg hemorrhagic fever","secondary_identifiers":["MEDGEN:9888","DOID:4327","icd11.foundation:696598707","MedDRA:10026822","MESH:D008379","SCTID:77503002","UMLS:C0024788","ICD10CM:A98.3","EFO:0007358","GARD:9444","ICD9:078.89","NCIT:C84883"],"synonyms":[{"name":"Green monkey disease","type":"exact"},{"name":"MHF","type":"exact"},{"name":"Marburg disease","type":"exact"},{"name":"Marburg virus disease","type":"exact"}],"termid":"MONDO:0020500","xrefs":{"Monarch":{"xref_id":"0020500"}}}


id: GO:0097169
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An inflammasome complex that consists of AIM2, ASC, and caspase-1. AIM2 is a member of the HN-200 protein family that appears to be the sensor of cytosolic double-stranded DNA.","definition_xrefs":["GOC:vp","PMID:20303873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canonical inflammasome complex","termid":"GO:0061702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005829","GO:0005575"],"is_obsolete":false,"name":"AIM2 inflammasome complex","termid":"GO:0097169"}


id: GO:0009219
data:
  {"annotated_genes":["SJAG_04657","SJAG_04665","SJAG_02874","SJAG_04627","SJAG_03771","SJAG_04487","SJAG_00885"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97304,109089,94250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[72779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[81214,71649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[94251,72780,70216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[72778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[71648,81237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"},{"annotations":[81238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a pyrimidine deoxynucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide metabolic process","termid":"GO:0006220"},{"relation_name":"is_a","term_name":"2'-deoxyribonucleotide metabolic process","termid":"GO:0009394"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02874":null,"SJAG_03771":null,"SJAG_04487":null,"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleotide metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine deoxyribonucleotide metabolism","type":"exact"}],"termid":"GO:0009219","terms_by_termid":{"GO:0006226":null,"GO:0006227":null,"GO:0006231":null,"GO:0006233":null,"GO:0006235":null,"GO:0006240":null,"GO:0046081":null}}


id: MONDO:0009814
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Kaler-Garrity-Stern syndrome is a rare syndrome, described in two sisters of Mennonite descent, characterized by sparse hair, osteopenia, intellectual disability, minor facial abnormalities, joint laxity and hypotonia. There have been no further descriptions in the literature since 1992.","definition_xrefs":["Orphanet:2324"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteopenia-intellectual disability-sparse hair syndrome","secondary_identifiers":["SCTID:732954002","UMLS:C1850140","OMIM:259690","GARD:354","MEDGEN:337979","MESH:C537706"],"synonyms":[{"name":"Kaler Garrity Stern syndrome","type":"related"},{"name":"Kaler-Garrity-Stern syndrome","type":"exact"},{"name":"osteopenia and sparse hair","type":"related"},{"name":"osteopenia intellectual disability sparse hair","type":"related"},{"name":"osteopenia mental retardation sparse hair","type":"related"}],"termid":"MONDO:0009814","xrefs":{"Monarch":{"xref_id":"0009814"}}}


id: PBO:0079611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 H pseudogene 1","termid":"PBO:0079611"}


id: MONDO:0020271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete phakomatosis with eye involvement (obsolete MONDO:0020271)","secondary_identifiers":["Orphanet:98701"],"termid":"MONDO:0020271","xrefs":{"Monarch":{"xref_id":"0020271"}}}


id: SO:0001494
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A centromere DNA Element II (CDEII) is part a conserved region of the centromere, consisting of a consensus region that is AT-rich and ~ 75-100 bp in length.","definition_xrefs":["PMID:11222754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conserved_region","termid":"SO:0000330"},{"relation_name":"part_of","term_name":"point_centromere","termid":"SO:0001794"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere_DNA_Element_II","synonyms":[{"name":"CDEII","type":"exact"},{"name":"centromere DNA Element II","type":"exact"}],"termid":"SO:0001494"}


id: PBO:0055624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3063","termid":"PBO:0055624"}


id: MONDO:0019945
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Solar urticaria (SU) is a rare and difficult to treat photosensitive disease, in which local skin swelling occurs within minutes of exposure to natural sunlight or even artificial light sources emitting ultraviolet radiation.","definition_xrefs":["Orphanet:97230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"solar urticaria","secondary_identifiers":["SCTID:10347006","icd11.foundation:64163683","GARD:19353","ICD10CM:L56.3","MedDRA:10041307","UMLS:C0263610","ICD9:708.8","MEDGEN:538004"],"termid":"MONDO:0019945","xrefs":{"Monarch":{"xref_id":"0019945"}}}


id: GO:0031515
data:
  {"annotated_genes":["SJAG_02637","SJAG_02386"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75889,76679],"is_not":false,"summary":null,"term":"GO:0031515"}]},"cv_name":"cellular_component","definition":"A protein complex involved in the catalysis of the formation of the modified nucleotide 1-methyladenosine (m1A) in tRNA. In yeast, it is a heterotetramer of two subunits, Gcd10p and Gcd14p, while in bacteria and archaea it is a homotetramer.","definition_xrefs":["PMID:14739239","PMID:10779558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methyltransferase complex","termid":"GO:0043527"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02386":null,"SJAG_02637":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"tRNA (m1A) methyltransferase complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0031515","terms_by_termid":{"GO:0031515":null}}


id: PBO:0088704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arf GEF","termid":"PBO:0088704"}


id: PBO:0055654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3094","termid":"PBO:0055654"}


id: MONDO:0033650
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex IV deficiency, nuclear-type","termid":"MONDO:0033885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex 4 deficiency, nuclear type 15","secondary_identifiers":["GARD:16412","DOID:0070500","MEDGEN:1773430","UMLS:C5436712","OMIM:619059"],"synonyms":[{"name":"MC4DN15","type":"exact"},{"name":"mitochondrial complex IV deficiency, nuclear type 15","type":"exact"}],"termid":"MONDO:0033650","xrefs":{"Monarch":{"xref_id":"0033650"}}}


id: PBO:0056433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 6","termid":"PBO:0056433"}


id: PBO:0041955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil and C2 domain containing 2A","termid":"PBO:0041955"}


id: PBO:0039495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A18, pseudogene","termid":"PBO:0039495"}


id: GO:0004847
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + bicarbonate + urea = ADP + 2 H+ + phosphate + urea-1-carboxylate.","definition_xrefs":["RHEA:20896","EC:6.3.4.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"urea carboxylase activity","secondary_identifiers":["KEGG_REACTION:R00774","MetaCyc:UREA-CARBOXYLASE-RXN"],"synonyms":[{"name":"ATP--urea amidolyase activity","type":"related"},{"name":"UALase activity","type":"related"},{"name":"UCA activity","type":"related"},{"name":"urea amidolyase activity","type":"related"},{"name":"urea carboxylase (hydrolysing)","type":"related"},{"name":"urea carboxylase (hydrolyzing) activity","type":"related"},{"name":"urea:carbon-dioxide ligase (ADP-forming)","type":"related"},{"name":"urease (ATP-hydrolysing)","type":"related"},{"name":"urease (ATP-hydrolyzing) activity","type":"related"}],"termid":"GO:0004847"}


id: PBO:0086034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function, essential for stationary phase survival; not required for growth on nonfermentable carbon sources; possibly linked with vacuolar transport","termid":"PBO:0086034"}


id: PBO:0079185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 14, pseudogene","termid":"PBO:0079185"}


id: GO:0102756
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: malonyl-CoA + a very-long-chain 2,3,4-saturated fatty acyl CoA = carbon dioxide + coenzyme A + a very-long-chain oxoacyl-CoA.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete very-long-chain 3-ketoacyl-CoA synthase activity (obsolete GO:0102756)","termid":"GO:0102756"}


id: PBO:0074557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 10","termid":"PBO:0074557"}


id: GO:0043429
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-nonaprenyl-6-methoxy-1,4-benzoquinone + S-adenosyl-L-methionine = 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinone + S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:11583838","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-nonaprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity (obsolete GO:0043429)","synonyms":[{"name":"2-nonaprenyl-6-methoxy-1,4-benzoquinone methylase activity","type":"exact"}],"termid":"GO:0043429"}


id: GO:0051282
data:
  {"annotated_genes":["SJAG_03850"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061454"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the binding or confining calcium ions such that they are separated from other components of a biological system.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"sequestering of calcium ion","termid":"GO:0051208"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sequestering of calcium ion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of calcium ion (Ca2+) retention","type":"exact"},{"name":"regulation of calcium ion (Ca2+) sequestering","type":"exact"},{"name":"regulation of calcium ion (Ca2+) sequestration","type":"exact"},{"name":"regulation of calcium ion (Ca2+) storage","type":"exact"},{"name":"regulation of retention of calcium ion (Ca2+)","type":"exact"},{"name":"regulation of sequestering of calcium ion (Ca2+)","type":"exact"},{"name":"regulation of sequestration of calcium ion (Ca2+)","type":"exact"},{"name":"regulation of storage of calcium ion (Ca2+)","type":"exact"}],"termid":"GO:0051282","terms_by_termid":{"GO:0061454":null}}


id: GO:1905614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of developmental vegetative growth.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11606552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"regulation of developmental vegetative growth","termid":"GO:1905613"},{"relation_name":"negatively_regulates","term_name":"developmental vegetative growth","termid":"GO:0080186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of developmental vegetative growth","synonyms":[{"name":"down regulation of developmental vegetative growth","type":"exact"},{"name":"down-regulation of developmental vegetative growth","type":"exact"},{"name":"downregulation of developmental vegetative growth","type":"exact"},{"name":"inhibition of developmental vegetative growth","type":"narrow"}],"termid":"GO:1905614"}


id: PBO:0086113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for clearance of inclusion bodies; localizes to the inclusion bodies formed under protein misfolding stress; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; protein abundance increases in response to DNA replication stress; IML2 has a paralog, YKR018C, that arose from the whole genome duplication","termid":"PBO:0086113"}


id: GO:0102472
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: eriodictyol + NADPH + O2 + 2 H+ = 2-hydroxyeriodictyol + NADP + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete eriodictyol 2-hydroxylase activity (obsolete GO:0102472)","termid":"GO:0102472"}


id: GO:0005948
data:
  {"annotated_genes":["SJAG_03985","SJAG_06635"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77481,77803],"is_not":false,"summary":null,"term":"GO:0005948"}]},"cv_name":"cellular_component","definition":"A dimeric (a large and a small chain) or tetrameric (two large and two small chains) enzyme complex. Catalyzes the formation of acetolactate from pyruvate.","definition_xrefs":["PMID:8756689","GOC:jl","PMID:16458324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03985":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"acetolactate synthase complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"acetohydroxyacid synthase complex","type":"exact"}],"termid":"GO:0005948","terms_by_termid":{"GO:0005948":null}}


id: PBO:0035765
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_spindle_assembly_checkpoint","termid":"PBO:0035765"}


id: PBO:0069153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 405, pseudogene","termid":"PBO:0069153"}


id: PBO:0038574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABRA C-terminal like","termid":"PBO:0038574"}


id: PBO:0052893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 10-4","termid":"PBO:0052893"}


id: MONDO:0003943
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare benign slow growing adipose tumor, characterized by the presence of polygonal brown fat cells with abundant cytoplasm, that arises within the nervous system.","definition_xrefs":["NCIT:C6997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system lipoma","termid":"MONDO:0003844"},{"relation_name":"is_a","term_name":"hibernoma","termid":"MONDO:0021168"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central nervous system hibernoma","secondary_identifiers":["UMLS:C1708362","DOID:6607","MEDGEN:317749"],"synonyms":[{"name":"central nervous system hibernoma","type":"exact"},{"name":"hibernoma of central nervous system","type":"exact"},{"name":"hibernoma of nervous system","type":"exact"},{"name":"hibernoma of the central nervous system","type":"exact"},{"name":"nervous system hibernoma","type":"related"}],"termid":"MONDO:0003943","xrefs":{"Monarch":{"xref_id":"0003943"}}}


id: MONDO:0010741
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any tooth agenesis in which the cause of the disease is a mutation in the EDA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tooth agenesis","termid":"MONDO:0005486"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tooth agenesis, selective, X-linked, 1","secondary_identifiers":["MEDGEN:410143","MESH:C567060","OMIM:313500","UMLS:C1970757","GARD:18246"],"synonyms":[{"name":"EDA tooth agenesis","type":"exact"},{"name":"STHAGX1","type":"related"},{"name":"hypodontia/oligodontia, X-linked, 1","type":"related"},{"name":"tooth agenesis caused by mutation in EDA","type":"exact"},{"name":"tooth agenesis, selective, X-linked 1, X-linked dominant","type":"exact"},{"name":"tooth agenesis, selective, X-linked, 1","type":"exact"},{"name":"tooth agenesis, selective, X-linked, type 1","type":"exact"}],"termid":"MONDO:0010741","xrefs":{"Monarch":{"xref_id":"0010741"}}}


id: PBO:0016913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0300 family protein 1","termid":"PBO:0016913"}


id: PBO:0057665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1256","termid":"PBO:0057665"}


id: PBO:0004313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg9","termid":"PBO:0004313"}


id: PBO:0073504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH2B adaptor protein 3","termid":"PBO:0073504"}


id: MOD:00122
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-tyrosine residue by a thioether bond to form 2-(S-L-cysteinyl)-L-tyrosine.","definition_xrefs":["DeltaMass:0","PubMed:15917234","PubMed:2002850","RESID:AA0113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioether crosslinked residues","termid":"MOD:00687"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"3'-(S-L-cysteinyl)-L-tyrosine","synonyms":[{"name":"(2S)-2-amino-3-(3-[(2R)2-amino-2-carboxyethylsulfanyl]-4-hydroxyphenyl)propanoic acid","type":"exact"},{"name":"2-amino-3-[3-(2-amino-2-carboxyethylthio)-4-hydroxyphenyl]propanoic acid","type":"exact"},{"name":"3'-(L-cystein-S-yl)-L-tyrosine","type":"exact"},{"name":"3'-(cystein-S-yl)tyrosine","type":"exact"},{"name":"CROSSLNK 3'-(S-cysteinyl)-tyrosine (Cys-Tyr)","type":"exact"},{"name":"CROSSLNK 3'-(S-cysteinyl)-tyrosine (Tyr-Cys)","type":"exact"},{"name":"S-(3-Tyr) (Crosslinked to Cysteine)","type":"exact"},{"name":"S-(tyros-3'-yl)cysteine","type":"exact"},{"name":"XLNK-SCys-3'Tyr","type":"exact"}],"termid":"MOD:00122"}


id: GO:0046216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of indole phytoalexins, any indole compound produced by plants as part of their defense response.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole-containing compound catabolic process","termid":"GO:0042436"},{"relation_name":"is_a","term_name":"indole phytoalexin metabolic process","termid":"GO:0046217"},{"relation_name":"is_a","term_name":"detoxification of nitrogen compound","termid":"GO:0051410"},{"relation_name":"is_a","term_name":"phytoalexin catabolic process","termid":"GO:0052316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0008150","GO:0098754","GO:0019748"],"is_obsolete":false,"name":"indole phytoalexin catabolic process","synonyms":[{"name":"indole phytoalexin breakdown","type":"exact"},{"name":"indole phytoalexin catabolism","type":"exact"},{"name":"indole phytoalexin degradation","type":"exact"}],"termid":"GO:0046216"}


id: PBO:0073101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex subunit D pseudogene 5","termid":"PBO:0073101"}


id: GO:0140522
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The activity of joining two lipid bilayers to form a single membrane.","definition_xrefs":["PMID:10332732","PMID:12600315","PMID:11493675","PMID:32100701","PMID:32641474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"fusogenic activity","termid":"GO:0140522"}


id: PBO:0080073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 37","termid":"PBO:0080073"}


id: PBO:0058684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6812","termid":"PBO:0058684"}


id: PBO:0079106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSC22D1 antisense RNA 1","termid":"PBO:0079106"}


id: GO:1990964
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex probably required for the internalization of endosomes during actin-coupled endocytosis. Links the site of endocytosis to the cell membrane-associated actin cytoskeleton, coordinating ARP2/3 stimulation at the later stages of endocytosis. Present in the late endocytic coat.","definition_xrefs":["PMID:10594004","PMID:11739778","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"actin cytoskeleton-regulatory complex","termid":"GO:1990964"}


id: PBO:0082107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A cargo receptor protein for Pma1p; works with Psg1p to promote the transport and maturation of Pma1p; localizes to the ER and COPII vesicles; a non-essential protein","termid":"PBO:0082107"}


id: GO:0098989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by glutamate binding to an NMDA-selective glutamate receptor on the surface of the target cell, followed by the movement of ions through a channel in the receptor complex, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:dos","ISBN:9780071120005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ionotropic glutamate receptor signaling pathway","termid":"GO:0035235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"NMDA selective glutamate receptor signaling pathway","termid":"GO:0098989"}


id: PBO:0079036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon AAC) 5-1","termid":"PBO:0079036"}


id: PR:Q9UUG2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC926.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUG2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized leucine-rich repeat-containing protein C926.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC926.06c","synonyms":[{"name":"Spom972h-SPAC926.06c","type":"exact"}],"termid":"PR:Q9UUG2"}


id: GO:1900911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of olefin biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of olefin metabolic process","termid":"GO:1900908"},{"relation_name":"regulates","term_name":"olefin biosynthetic process","termid":"GO:1900674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of olefin biosynthetic process","synonyms":[{"name":"regulation of olefin anabolism","type":"exact"},{"name":"regulation of olefin biosynthesis","type":"exact"},{"name":"regulation of olefin formation","type":"exact"},{"name":"regulation of olefin synthesis","type":"exact"}],"termid":"GO:1900911"}


id: MONDO:0007891
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial generalized lentiginosis is a rare, inherited, skin hyperpigmentation disorder characterized by widespread lentigines without associated noncutaneous abnormalities. Patients present multiple brown to dark brown, non-elevated macula of 0.2 to 1 cm in diameter, spread over the entire body, sometimes including palms or soles, but never oral mucosa.","definition_xrefs":["Orphanet:231040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"familial generalized lentiginosis","secondary_identifiers":["GARD:17158","SCTID:765195000","MEDGEN:486897","OMIM:151001","MESH:C573023","UMLS:C3492944"],"synonyms":[{"name":"familial lentigines profusa","type":"exact"},{"name":"familial multiple lentigines syndrome without systemic involvement","type":"exact"},{"name":"lentiginosis profusa","type":"related"},{"name":"lentiginosis, diffuse","type":"related"},{"name":"lentiginosis, generalised","type":"related"},{"name":"lentiginosis, generalized","type":"related"},{"name":"lentiginosis, inherited patterned","type":"related"}],"termid":"MONDO:0007891","xrefs":{"Monarch":{"xref_id":"0007891"}}}


id: PBO:0004561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Cwf29","termid":"PBO:0004561"}


id: PBO:0053433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 378","termid":"PBO:0053433"}


id: MONDO:0859576
data:
  {"annotated_genes":["SJAG_03436"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87396],"is_not":false,"summary":null,"term":"MONDO:0859576"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mosaic variegated aneuploidy syndrome","termid":"MONDO:0000141"},{"relation_name":"is_a","term_name":"Atelis syndrome","termid":"MONDO:0859393"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03436":null},"genotype_count":0,"is_obsolete":false,"name":"Atelis syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1824055","UMLS:C5774282","OMIM:620185"],"termid":"MONDO:0859576","terms_by_termid":{"MONDO:0859576":null},"xrefs":{"Monarch":{"xref_id":"0859576"}}}


id: PBO:0048736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate dehydrogenase 1 pseudogene 9","termid":"PBO:0048736"}


id: GO:0075289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a nonmotile, asexual spore is formed within a cell in certain algae and fungi (commonly in the Phycomycetes), the wall of aplanospore is distinct from that of the parent cell.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sporangiospore formation","termid":"GO:0034300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aplanospore formation","termid":"GO:0075289"}


id: PBO:0068208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 515","termid":"PBO:0068208"}


id: MONDO:0004574
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Deficiency of vitamin B6. It is usually caused by alcoholism, malabsorption, or as a side effect of medications. Signs and symptoms include stomatitis, glossitis, dermatitis, peripheral neuropathy, irritability, seizures, and anemia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin B deficiency","termid":"MONDO:0042976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxine deficiency anemia","secondary_identifiers":["ICD9:266.1","MEDGEN:543733","UMLS:C0272013","DOID:8455","MESH:D026681","NCIT:C85221","SCTID:86448001","ICD9:281.8"],"synonyms":[{"name":"B6 deficiencies, vitamin","type":"related"},{"name":"B6 deficiency, vitamin","type":"related"},{"name":"B6 vitamin deficiencies","type":"related"},{"name":"B6 vitamin deficiency","type":"related"},{"name":"deficiencies, B6 vitamin","type":"related"},{"name":"deficiencies, vitamin B6","type":"related"},{"name":"deficiency, B6 vitamin","type":"related"},{"name":"deficiency, pyridoxine","type":"related"},{"name":"deficiency, vitamin B 6","type":"related"},{"name":"deficiency, vitamin B6","type":"related"},{"name":"pyridoxine Deficincy","type":"exact"},{"name":"pyridoxine deficiency","type":"related"},{"name":"vitamin B6 deficiencies","type":"related"},{"name":"vitamin B6 deficiency","type":"related"},{"name":"vitamin B6 deficiency syndrome","type":"exact"},{"name":"vitamin deficiencies, B6","type":"related"},{"name":"vitamin deficiency, B6","type":"related"}],"termid":"MONDO:0004574","xrefs":{"Monarch":{"xref_id":"0004574"}}}


id: MONDO:0015169
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by chronic diarrhea in infancy or childhood in association with intestinal glucoamylase deficiency.","definition_xrefs":["Orphanet:103907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of carbohydrate transmembrane transport and absorption","termid":"MONDO:0017706"},{"relation_name":"is_a","term_name":"chronic diarrheal disease","termid":"MONDO:0044751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0004335","MONDO:0005066"],"is_obsolete":false,"name":"chronic diarrhea due to glucoamylase deficiency","secondary_identifiers":["icd11.foundation:2084206046","GARD:19838","MEDGEN:898614","SCTID:716277000","UMLS:C4275068","NANDO:2200911"],"synonyms":[{"name":"chronic diarrhea due to glucoamylase deficiency","type":"exact"},{"name":"maltase glucoamylase deficiency","type":"related"},{"name":"maltase-glucoamylase deficiency","type":"exact"}],"termid":"MONDO:0015169","xrefs":{"Monarch":{"xref_id":"0015169"}}}


id: MONDO:0002307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of both the eyelids and the conjunctiva.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conjunctivitis","termid":"MONDO:0003799"},{"relation_name":"is_a","term_name":"blepharitis","termid":"MONDO:0004785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"blepharoconjunctivitis","secondary_identifiers":["ICD9:372.2","UMLS:C0005743","DOID:2456","icd11.foundation:956823887","ICD9:372.20","ICD10CM:H10.5","MEDGEN:2669","NCIT:C34430","SCTID:68659002"],"termid":"MONDO:0002307","xrefs":{"Monarch":{"xref_id":"0002307"}}}


id: GO:0048700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a seed acquires tolerance to severe drying, before entering into a dry, either dormant or quiescent state.","definition_xrefs":["ISBN:9781405139830","GOC:ki","GOC:jid","GOC:PO_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"acquisition of desiccation tolerance","termid":"GO:0097439"},{"relation_name":"part_of","term_name":"seed dormancy process","termid":"GO:0010162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acquisition of desiccation tolerance in seed","synonyms":[{"name":"acquisition of desiccation tolerance","type":"broad"}],"termid":"GO:0048700"}


id: PBO:0004817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L19","termid":"PBO:0004817"}


id: GO:1990389
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of ubiquitin-conjugating enzyme activity during ER-associated protein degradation (ERAD). In S. cerevisiae, UBC7 is the ubiquitin-conjugating enzyme (E2) and requires binding to the ER surface by CUE1.","definition_xrefs":["PMID:23028185","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER ubiquitin ligase complex","termid":"GO:0000835"},{"relation_name":"is_a","term_name":"ubiquitin conjugating enzyme complex","termid":"GO:0031371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737","GO:0005789","GO:0005783"],"is_obsolete":false,"name":"CUE1-UBC7 ubiquitin-conjugating enzyme complex","synonyms":[{"name":"CUE1-UBC7 ubiquitin-conjugating enzyme (E2)","type":"exact"}],"termid":"GO:1990389"}


id: PBO:0089515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA (guanine-N7-)-methyltransferase Bud23","termid":"PBO:0089515"}


id: FYPO:0004423
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of threonine residues of one or more specific proteins is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation","termid":"FYPO:0004422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein threonine phosphorylation","synonyms":[{"name":"normal peptidyl-threonine phosphorylation","type":"exact"}],"termid":"FYPO:0004423"}


id: GO:0070216
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an isoform of the MDM4 protein, a negative regulator of p53.","definition_xrefs":["GOC:mah","GOC:nln"],"gene_count":0,"genotype_count":0,"name":"obsolete MDM4 binding (obsolete GO:0070216)","synonyms":[{"name":"MDM4 binding","type":"exact"},{"name":"MDMX binding","type":"exact"}],"termid":"GO:0070216"}


id: PBO:0065232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 13","termid":"PBO:0065232"}


id: PBO:0054281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1672","termid":"PBO:0054281"}


id: FYPO:0003146
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to hydrostatic pressure.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to hydrostatic pressure","synonyms":[{"name":"decreased growth during cellular response to hydrostatic pressure","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to hydrostatic pressure","type":"exact"},{"name":"hypersensitive to hydrostatic pressure","type":"exact"},{"name":"sensitive to hydrostatic pressure during mitotic cell cycle","type":"related"},{"name":"sensitive to hydrostatic pressure during vegetative growth","type":"exact"}],"termid":"FYPO:0003146"}


id: MOD:01573
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems iTRAQ8plex-119 reporter+balance group.","definition_xrefs":["Unimod:731#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"iTRAQ8plex-119 reporter+balance reagent acylated residue","termid":"MOD:01570"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-119 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01573"}


id: GO:0031236
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of a plasma membrane consisting of gene products and protein complexes that are loosely bound to its periplasmic surface, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mah","GOC:dos","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of external side of plasma membrane","termid":"GO:0031232"},{"relation_name":"part_of","term_name":"periplasmic side of plasma membrane","termid":"GO:0098567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"part_of","termid":"GO:0009986"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0009986"],"is_obsolete":false,"name":"extrinsic component of periplasmic side of plasma membrane","secondary_identifiers":["GO:0031238"],"synonyms":[{"name":"extrinsic to external leaflet of plasma membrane, in periplasmic space","type":"narrow"},{"name":"extrinsic to external side of plasma membrane, in periplasmic space","type":"narrow"}],"termid":"GO:0031236"}


id: GO:1902920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving poly(hydroxyvalerate).","definition_xrefs":["GOC:TermGenie","GO_REF:0000068","PMID:21705209","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poly(hydroxyalkanoate) metabolic process","termid":"GO:1901440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly(hydroxyvalerate) metabolic process","synonyms":[{"name":"poly(hydroxyvalerate) metabolism","type":"exact"}],"termid":"GO:1902920"}


id: MONDO:0014424
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Congenital deficiency in alpha-fetoprotein is a benign genetic condition characterized by a dramatically decreased level of alpha-fetoprotein in fetus or neonate.","definition_xrefs":["Orphanet:168612"],"gene_count":0,"genotype_count":0,"name":"obsolete congenital deficiency in alpha-fetoprotein (obsolete MONDO:0014424)","secondary_identifiers":["MESH:C566300","OMIM:615969"],"synonyms":[{"name":"AFPD","type":"related"},{"name":"ALPHA-fetoprotein deficiency","type":"related"}],"termid":"MONDO:0014424","xrefs":{"Monarch":{"xref_id":"0014424"}}}


id: GO:0010124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phenylacetate.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"phenylacetate catabolic process","secondary_identifiers":["MetaCyc:PWY0-321"],"synonyms":[{"name":"phenylacetate breakdown","type":"exact"},{"name":"phenylacetate catabolism","type":"exact"},{"name":"phenylacetate degradation","type":"exact"}],"termid":"GO:0010124"}


id: GO:1905632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within an euchromatin.","definition_xrefs":["GO_REF:0000087","GOC:TermGenie","PMID:20889714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chromatin","termid":"GO:0071168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to euchromatin","synonyms":[{"name":"protein localisation in euchromatin","type":"exact"},{"name":"protein localisation to euchromatin","type":"exact"},{"name":"protein localization in euchromatin","type":"exact"}],"termid":"GO:1905632"}


id: PBO:0044216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortactin binding protein 2","termid":"PBO:0044216"}


id: MONDO:1012538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital dyserythropoietic anemia, non-human animal","termid":"MONDO:1011707"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital dyserythropoietic anemia, cattle","secondary_identifiers":["OMIA:002300-9913"],"termid":"MONDO:1012538","xrefs":{"Monarch":{"xref_id":"1012538"}}}


id: PBO:0070792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 22","termid":"PBO:0070792"}


id: MONDO:0006935
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The obstruction of the right ventricular outflow tract that originates within the body of the right ventricle, that exists at the time of birth; it often occurs in association with other intracardiac anomalies.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary valve stenosis","termid":"MONDO:0006936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"pulmonary subvalvular stenosis","secondary_identifiers":["NCIT:C34961","SCTID:204370002","ICD10CM:Q24.3","MESH:D011662","NANDO:2200276","ICD9:746.83","NANDO:2100092","EFO:1001137","UMLS:C0034084","DOID:8861","MEDGEN:11030"],"synonyms":[{"name":"congenital infundibular stenosis","type":"exact"},{"name":"infundibular pulmonic stenosis","type":"exact"},{"name":"infundibular pulmonic stenosis, congenital","type":"exact"},{"name":"pulmonary infundibular stenosis","type":"exact"},{"name":"subvalvular pulmonic stenosis","type":"exact"}],"termid":"MONDO:0006935","xrefs":{"Monarch":{"xref_id":"0006935"}}}


id: GO:0021727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the intermediate reticular formation over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GOC:jid","GO_REF:0000021","GOC:cls","GOC:curators","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"medullary reticular formation development","termid":"GO:0021723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intermediate reticular formation development","synonyms":[{"name":"intermediate reticular nucleus development","type":"exact"}],"termid":"GO:0021727"}


id: GO:0061009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the common bile duct over time, from its formation to the mature structure. The common bile duct is formed from the joining of the common hepatic duct running from the liver, and the cystic duct running from the gallbladder. The common bile duct transports bile from the liver and gallbladder to the intestine.","definition_xrefs":["PMID:20614624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"part_of","term_name":"hepaticobiliary system development","termid":"GO:0061008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"common bile duct development","synonyms":[{"name":"CBD development","type":"exact"},{"name":"EHBD development","type":"broad"},{"name":"bile duct development","type":"exact"},{"name":"extrahepatic bile duct development","type":"broad"}],"termid":"GO:0061009"}


id: MONDO:0037256
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"glandular cell neoplasm","termid":"MONDO:0024276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serous neoplasm","secondary_identifiers":["NCIT:C7074","UMLS:C1335951","MEDGEN:233442"],"synonyms":[{"name":"serous neoplasm","type":"exact"}],"termid":"MONDO:0037256","xrefs":{"Monarch":{"xref_id":"0037256"}}}


id: MONDO:1012680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inherited rickets that occurs in domestic cats due to a mutation in the VDR gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"rickets, non-human animal","termid":"MONDO:1011456"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin D-dependent rickets, VDR-related, cat","secondary_identifiers":["OMIA:001431-9685"],"synonyms":[{"name":"vitamin D-deficiency rickets, type II, domestic cat","type":"related"}],"termid":"MONDO:1012680","xrefs":{"Monarch":{"xref_id":"1012680"}}}


id: GO:1900860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of brevianamide F biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of brevianamide F biosynthetic process (obsolete GO:1900860)","synonyms":[{"name":"up regulation of brevianamide F biosynthetic process","type":"exact"},{"name":"up-regulation of brevianamide F biosynthetic process","type":"exact"},{"name":"upregulation of brevianamide F biosynthetic process","type":"exact"}],"termid":"GO:1900860"}


id: MONDO:1011269
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary progressive, bilateral lens opacity affecting dogs within the first few months of life due to a mutation in the HSF4 gene.","definition_xrefs":["PMID:17611257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early onset cataract HSF4-related, dog","secondary_identifiers":["OMIA:001758-9615"],"termid":"MONDO:1011269","xrefs":{"Monarch":{"xref_id":"1011269"}}}


id: PBO:0031032
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vacuole_organization_during_vegetative_growth","termid":"PBO:0031032"}


id: PBO:0058762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6886","termid":"PBO:0058762"}


id: MONDO:0859525
data:
  {"annotated_genes":["SJAG_05330"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88370],"is_not":false,"summary":null,"term":"MONDO:0859525"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"hearing loss, autosomal dominant 87","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1840978","UMLS:C5830342","OMIM:620281"],"termid":"MONDO:0859525","terms_by_termid":{"MONDO:0859525":null},"xrefs":{"Monarch":{"xref_id":"0859525"}}}


id: PBO:0012536
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_maturation_of","termid":"PBO:0012536"}


id: GO:1904552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chemotaxis to arachidonic acid.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16382163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"regulates","term_name":"chemotaxis to arachidonate","termid":"GO:0034670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of chemotaxis to arachidonate","synonyms":[{"name":"regulation of chemotaxis to arachidonic acid","type":"exact"}],"termid":"GO:1904552"}


id: MONDO:0022756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 1q deletion is a chromosome abnormality that occurs when there is a missing copy of the genetic material located on thelong arm (q) of chromosome 1. The severity of the condition and the signs and symptoms depend on the size and location of the deletion and which genes are involved. Features that often occur in people with chromosome 1q deletion include developmental delay, intellectual disability, behavioral problems, and distinctive facial features. Most cases are not inherited, but people can pass the deletion on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0008669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 1","termid":"MONDO:0016866"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1q deletion","secondary_identifiers":["icd11.foundation:296620919","MEDGEN:1825942","GARD:8669","Orphanet:262001","UMLS:C5679674"],"synonyms":[{"name":"1q deletion","type":"related"},{"name":"1q monosomy","type":"related"},{"name":"deletion 1q","type":"related"},{"name":"monosomy 1q","type":"related"},{"name":"partial deletion of chromosome 1q","type":"exact"},{"name":"partial deletion of the long arm of chromosome 1","type":"exact"},{"name":"partial deletion of the long arm of chromosome type 1","type":"exact"},{"name":"partial monosomy 1q","type":"related"},{"name":"partial monosomy of chromosome 1q","type":"exact"},{"name":"partial monosomy of the long arm of chromosome 1","type":"exact"}],"termid":"MONDO:0022756","xrefs":{"Monarch":{"xref_id":"0022756"}}}


id: GO:0034389
data:
  {"annotated_genes":["SJAG_04059","SJAG_03162","SJAG_01537","SJAG_02980","SJAG_01180","SJAG_03609","SJAG_04049"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[120759,90580,96462,63059,112839,113915,116044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140042"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a lipid particle.","definition_xrefs":["GOC:mah","GOC:dph","PMID:18093937","PMID:18250201","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01180":null,"SJAG_01537":null,"SJAG_02980":null,"SJAG_03162":null,"SJAG_03609":null,"SJAG_04049":null,"SJAG_04059":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipid droplet organization","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-8964572"],"synonyms":[{"name":"adiposome organization","type":"exact"},{"name":"lipid body organization","type":"exact"},{"name":"lipid particle organisation","type":"exact"},{"name":"lipid particle organization","type":"exact"},{"name":"lipid particle organization and biogenesis","type":"broad"}],"termid":"GO:0034389","terms_by_termid":{"GO:0140042":null}}


id: MONDO:0004056
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive or non-invasive papillary transitional cell carcinoma of the urinary bladder. It is classified as low - or high-grade. -- 2003","definition_xrefs":["NCIT:C7383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bladder papillary urothelial neoplasm","termid":"MONDO:0003442"},{"relation_name":"is_a","term_name":"bladder transitional cell carcinoma","termid":"MONDO:0005611"},{"relation_name":"is_a","term_name":"papillary transitional cell carcinoma","termid":"MONDO:0006350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bladder papillary urothelial carcinoma","secondary_identifiers":["UMLS:C1518882","MEDGEN:309552","DOID:6975"],"synonyms":[{"name":"bladder papillary urothelial carcinoma","type":"exact"},{"name":"bladder urothelial papillary carcinoma","type":"related"},{"name":"urinary bladder papillary transitional cell carcinoma","type":"exact"},{"name":"urothelial papillary carcinoma of the bladder","type":"exact"}],"termid":"MONDO:0004056","xrefs":{"Monarch":{"xref_id":"0004056"}}}


id: PBO:0071418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 24","termid":"PBO:0071418"}


id: PBO:0042576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDKN2B antisense RNA 1","termid":"PBO:0042576"}


id: GO:1905102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of apoptosome assembly.","definition_xrefs":["GOC:BHF_miRNA","GOC:TermGenie","PMID:26265044","GOC:bc","GO_REF:0000058","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of apoptosome assembly","termid":"GO:1905100"},{"relation_name":"positively_regulates","term_name":"apoptosome assembly","termid":"GO:0097314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of apoptosome assembly","synonyms":[{"name":"activation of apoptosome assembly","type":"narrow"},{"name":"activation of apoptosome formation","type":"narrow"},{"name":"positive regulation of apoptosome formation","type":"exact"},{"name":"up regulation of apoptosome assembly","type":"exact"},{"name":"up regulation of apoptosome formation","type":"exact"},{"name":"up-regulation of apoptosome assembly","type":"exact"},{"name":"up-regulation of apoptosome formation","type":"exact"},{"name":"upregulation of apoptosome assembly","type":"exact"},{"name":"upregulation of apoptosome formation","type":"exact"}],"termid":"GO:1905102"}


id: GO:0070173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of enamel mineralization, the deposition of calcium salts in tooth enamel.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tooth mineralization","termid":"GO:0070170"},{"relation_name":"regulates","term_name":"enamel mineralization","termid":"GO:0070166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of enamel mineralization","termid":"GO:0070173"}


id: GO:0047098
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 O2 + donor-H2 + Latia luciferin = light + H2O + acceptor + formate + CO2 + oxidized Latia luciferin.","definition_xrefs":["EC:1.14.99.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"},{"relation_name":"is_a","term_name":"luciferin monooxygenase activity","termid":"GO:0045289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"Latia-luciferin monooxygenase (demethylating) activity","secondary_identifiers":["RHEA:12677","MetaCyc:1.14.99.21-RXN"],"synonyms":[{"name":"Latia luciferin monooxygenase (demethylating)","type":"related"},{"name":"Latia-luciferin,hydrogen-donor:oxygen oxidoreductase (demethylating)","type":"related"},{"name":"luciferase (Latia luciferin)","type":"related"}],"termid":"GO:0047098"}


id: GO:0140626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of an opioid growth factor receptor binding to its physiological ligand, opioid growth factor (OGF, met-enkephalin). The OGF-OGFr complex leads to the increase in the synthesis of the selective cyclin-dependent kinase (CDK) inhibitor proteins, p12 (POLD4) and p16 (CDKN2A).","definition_xrefs":["PMID:19675283","PMID:19923357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"opioid growth factor receptor signaling pathway","secondary_identifiers":["Wikipedia:OGFr","Wikipedia:Opioid_receptor"],"termid":"GO:0140626"}


id: CHEBI:53090
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-dicyclohexylcarbodiimide","termid":"CHEBI:53090"}


id: MONDO:0017515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic brachydactyly of fingers","termid":"MONDO:0017451"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly of fingers, unilateral","secondary_identifiers":["icd11.foundation:825108601","Orphanet:295128"],"synonyms":[{"name":"short fingers, unilateral","type":"exact"}],"termid":"MONDO:0017515","xrefs":{"Monarch":{"xref_id":"0017515"}}}


id: PBO:0059408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S34","termid":"PBO:0059408"}


id: PBO:0001409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated ubiquitin-like modifier Atg12","termid":"PBO:0001409"}


id: PBO:0080992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 24","termid":"PBO:0080992"}


id: PBO:0038721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 16","termid":"PBO:0038721"}


id: MONDO:0017139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oromandibular-limb hypogenesis syndromes (OLHS) are a group of dysmorphic complexes (including Charlie M syndrome, Hanhart syndrome and glossopalatine ankylosis) characterized by the association of severe asymmetric limb defects (primarily involving distal segments) and abnormalities of the oral cavity and mandible (hypoglossia, aglossia, micrognathia, glossopalatine ankylosis, cleft palate, and gingival anomalies).","definition_xrefs":["Orphanet:2749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"oromandibular-limb anomalies syndrome","termid":"MONDO:0015498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"oromandibular-limb hypogenesis syndrome","secondary_identifiers":["MEDGEN:1843329","icd11.foundation:1665391511","UMLS:C5679764","GARD:4116"],"synonyms":[{"name":"Oroacral syndrome","type":"exact"},{"name":"oro-mandibular-limb hypogenesis syndrome","type":"related"}],"termid":"MONDO:0017139","xrefs":{"Monarch":{"xref_id":"0017139"}}}


id: MONDO:0001561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Narrowing of the pyloric lumen caused either by hypertrophy of the surrounding muscles or tissue scarring due to a chronic peptic ulcer.","definition_xrefs":["NCIT:C34966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stomach disorder","termid":"MONDO:0004298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pyloric stenosis","secondary_identifiers":["MedDRA:10062499","UMLS:C0034194","HP:0002021","MEDGEN:18780","MESH:D017219","EFO:0009626","DOID:12639","DOID:3122","SCTID:367403001","MESH:D011707"],"synonyms":[{"name":"GOO","type":"exact"},{"name":"gastric outflow obstruction","type":"exact"},{"name":"gastric outlet obstruction","type":"exact"},{"name":"pyloric stenosis","type":"exact"},{"name":"pyloric stenosis (disease)","type":"exact"}],"termid":"MONDO:0001561","xrefs":{"Monarch":{"xref_id":"0001561"}}}


id: GO:0141060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption of an anatomical structure of another organism, leading to damage or temporary subversion of that structure.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in interspecies interaction between organisms","termid":"GO:0044419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"disruption of anatomical structure in another organism","termid":"GO:0141060"}


id: PBO:0072238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 13","termid":"PBO:0072238"}


id: GO:0030121
data:
  {"annotated_genes":["SJAG_04609","SJAG_04565","SJAG_00379","SJAG_01809"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[62802,79369,114639,114851],"is_not":false,"summary":null,"term":"GO:0030121"}]},"cv_name":"cellular_component","definition":"A heterotetrameric AP-type membrane coat adaptor complex that consists of beta1, gamma, mu1 and sigma1 subunits and links clathrin to the membrane surface of a vesicle; vesicles with AP-1-containing coats are normally found primarily in the trans-Golgi network. In at least humans, the AP-1 complex can be heterogeneric due to the existence of multiple subunit isoforms encoded by different genes (gamma1 and gamma2, mu1A and mu1B, and sigma1A, sigma1B and sigma1C).","definition_xrefs":["PMID:21097499","PMID:10611976","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin adaptor complex","termid":"GO:0030131"},{"relation_name":"part_of","term_name":"clathrin coat of trans-Golgi network vesicle","termid":"GO:0030130"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00379":null,"SJAG_01809":null,"SJAG_04565":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0032991","GO:0005794","GO:0005575"],"is_obsolete":false,"name":"AP-1 adaptor complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"AP-1 related adapter complex","type":"related"},{"name":"HA1","type":"exact"},{"name":"HA1 clathrin adaptor","type":"exact"}],"termid":"GO:0030121","terms_by_termid":{"GO:0030121":null}}


id: GO:0016155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10-formyltetrahydrofolate + H2O + NADP+ = (6S)-5,6,7,8-tetrahydrofolate + CO2 + H+ + NADPH.","definition_xrefs":["EC:1.5.1.6","RHEA:10180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"formyltetrahydrofolate dehydrogenase activity","secondary_identifiers":["MetaCyc:FORMYLTETRAHYDROFOLATE-DEHYDROGENASE-RXN","KEGG_REACTION:R00941"],"synonyms":[{"name":"10-formyl tetrahydrofolate:NADP oxidoreductase activity","type":"related"},{"name":"10-formyl-H2PtGlu:NADP oxidoreductase activity","type":"related"},{"name":"10-formyl-H4folate dehydrogenase activity","type":"related"},{"name":"10-formyltetrahydrofolate dehydrogenase activity","type":"related"},{"name":"10-formyltetrahydrofolate:NADP+ oxidoreductase activity","type":"related"},{"name":"N10-formyltetrahydrofolate dehydrogenase activity","type":"related"}],"termid":"GO:0016155"}


id: PBO:0004294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase regulator Est1","termid":"PBO:0004294"}


id: MONDO:0001586
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The most common type of mucopolysaccharidosis. It is inherited in an autosomal recessive pattern. It comprises a group of lysosomal storage diseases which includes the most severe form (Hurler syndrome) and the mildest form (Scheie syndrome).","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete eyebrow hypertrophy (obsolete MONDO:0020186)","termid":"MONDO:0020186"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"bone disorder","termid":"MONDO:0005381"},{"relation_name":"is_a","term_name":"mucopolysaccharidosis","termid":"MONDO:0019249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328","MONDO:0002561","MONDO:0037792"],"is_obsolete":false,"name":"mucopolysaccharidosis type 1","secondary_identifiers":["NANDO:2201168","icd11.foundation:1539226250","SCTID:75610003","GARD:10335","MEDGEN:44171","Orphanet:579","MedDRA:10056886","NANDO:2200547","DOID:12802","NCIT:C85053","NORD:1462","UMLS:C0023786"],"synonyms":[{"name":"Alpha-L-iduronidase deficiency","type":"exact"},{"name":"Hurler syndrome","type":"narrow"},{"name":"Hurler syndrome (subtype)","type":"related"},{"name":"Hurler-Scheie syndrome (subtype)","type":"related"},{"name":"IDUA deficiency","type":"related"},{"name":"MPS 1","type":"related"},{"name":"MPS I","type":"related"},{"name":"MPS I - Hurler syndrome","type":"exact"},{"name":"MPS1","type":"exact"},{"name":"MPSI","type":"exact"},{"name":"Mucopolysaccharidosis Type I","type":"exact"},{"name":"Scheie syndrome (subtype) formerly known as Mucopoly-saccharidosis type V)","type":"related"},{"name":"attenuated MPS I (subtype, includes Hurler-Scheie and Scheie syndrome)","type":"related"},{"name":"iduronidase deficiency disease","type":"exact"},{"name":"lipochondrodystrophy","type":"exact"},{"name":"mucopolysaccharidosis I","type":"related"},{"name":"mucopolysaccharidosis type 1","type":"exact"},{"name":"mucopolysaccharidosis type I","type":"exact"},{"name":"mucopolysaccharidosis, MPS-I","type":"exact"},{"name":"mucopolysaccharidosis, type 1","type":"exact"},{"name":"severe MPS I (subtype, also known as Hurler syndrome)","type":"related"}],"termid":"MONDO:0001586","xrefs":{"Monarch":{"xref_id":"0001586"}}}


id: PBO:0027210
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-large_vacuoles_present_in_decreased_numbers_during_salt_stress","termid":"PBO:0027210"}


id: MONDO:0001768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lacrimal apparatus disorder","termid":"MONDO:0001854"},{"relation_name":"is_a","term_name":"eyelid disorder","termid":"MONDO:0003382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"stenosis of lacrimal passage","secondary_identifiers":["MEDGEN:509870","ICD9:375.53","SCTID:81345003","UMLS:C0155245","DOID:13654"],"synonyms":[{"name":"stenosis of lacrimal canaliculi","type":"exact"}],"termid":"MONDO:0001768","xrefs":{"Monarch":{"xref_id":"0001768"}}}


