# terms

id: PBO:0028122
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-lateral_cortical_nodes_present_in_increased_numbers","termid":"PBO:0028122"}


id: GO:0019755
data:
  {"annotated_genes":["SJAG_04731","SJAG_02125"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072489"},{"annotations":[58056],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071918"}]},"cv_name":"biological_process","definition":"The directed movement of one-carbon compounds into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02125":null,"SJAG_04731":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"one-carbon compound transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"one carbon compound transport","type":"exact"}],"termid":"GO:0019755","terms_by_termid":{"GO:0071918":null,"GO:0072489":null}}


id: GO:0019745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pentacyclic triterpenoid compounds, terpenoids with six isoprene units and 5 carbon rings.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triterpenoid biosynthetic process","termid":"GO:0016104"},{"relation_name":"is_a","term_name":"pentacyclic triterpenoid metabolic process","termid":"GO:0019742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"pentacyclic triterpenoid biosynthetic process","synonyms":[{"name":"pentacyclic triterpenoid anabolism","type":"exact"},{"name":"pentacyclic triterpenoid biosynthesis","type":"exact"},{"name":"pentacyclic triterpenoid formation","type":"exact"},{"name":"pentacyclic triterpenoid synthesis","type":"exact"}],"termid":"GO:0019745"}


id: FYPO:0006378
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endoplasmic reticulum is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to endoplasmic reticulum during vegetative growth","synonyms":[{"name":"normal protein localisation to endoplasmic reticulum during vegetative growth","type":"exact"},{"name":"normal protein localization to ER during vegetative growth","type":"exact"},{"name":"normal protein localization to endoplasmic reticulum during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006378"}


id: PBO:0090977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory pathway protein Sec39","termid":"PBO:0090977"}


id: PBO:0064985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich protein BstNI subfamily 2","termid":"PBO:0064985"}


id: PBO:0116271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Evolutionarily-conserved 5'-3' exonuclease; deNADing enzyme that modulates mitochondrial NAD-capped RNA; component of cytoplasmic P-bodies involved in mRNA decay; positively regulates transcription initiation and elongation; involved in microtubule-mediated processes, filamentous growth, rRNA maturation, telomere maintenance, tRNA intron turnover; negative regulator of autophagy; activated by glycolytic flux and scavenger decapping enzyme Dcs1p; role in preventing L-A mycovirus pathogenesis","termid":"PBO:0116271"}


id: PBO:0050570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hornerin","termid":"PBO:0050570"}


id: PBO:0054997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2412","termid":"PBO:0054997"}


id: MONDO:0005669
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A superficial mycosis that is caused by Piedraia hortae and is manifested by a small firm black nodule involving the hair shaft.","direct_ancestors":[{"relation_name":"is_a","term_name":"piedra","termid":"MONDO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"black piedra","secondary_identifiers":["UMLS:C0153249","icd11.foundation:1990974193","MEDGEN:452132","SCTID:33666009","DOID:12711","ICD10CM:B36.3","ICD9:111.3"],"termid":"MONDO:0005669","xrefs":{"Monarch":{"xref_id":"0005669"}}}


id: GO:0021661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of rhombomere 4 is generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:curators","GO_REF:0000021","GOC:dgh","GOC:dph","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere morphogenesis","termid":"GO:0021593"},{"relation_name":"part_of","term_name":"rhombomere 4 development","termid":"GO:0021570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 4 morphogenesis","termid":"GO:0021661"}


id: GO:0002186
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dimeric protein complex having creatine kinase activity.","definition_xrefs":["PMID:173175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"creatine kinase complex","termid":"GO:0002185"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991","GO:0005829"],"is_obsolete":false,"name":"cytosolic creatine kinase complex","termid":"GO:0002186"}


id: PBO:0030761
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_selenite_ion","termid":"PBO:0030761"}


id: GO:0033773
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an isoflavone + O2 + reduced [NADPH-hemoprotein reductase] = a 2'-hydroxyisoflavone + H+ + H2O + oxidized [NADPH-hemoprotein reductase].","definition_xrefs":["RHEA:18849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"isoflavone 2'-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-11846","EC:1.14.14.90"],"synonyms":[{"name":"CYP Ge-3","type":"related"},{"name":"CYP81E1","type":"related"},{"name":"isoflavone 2'-monooxygenase activity","type":"broad"}],"termid":"GO:0033773"}


id: MONDO:0018303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete generalized isolated dystonia (obsolete MONDO:0018303)","termid":"MONDO:0018303","xrefs":{"Monarch":{"xref_id":"0018303"}}}


id: MONDO:0014659
data:
  {"annotated_genes":["SJAG_04956"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86911],"is_not":false,"summary":null,"term":"MONDO:0014659"}]},"cv_name":"mondo","definition":"Any infantile liver failure in which the cause of the disease is a mutation in the NBAS gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infantile liver failure","termid":"MONDO:0000023"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04956":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"infantile liver failure syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C158135","GARD:13113","MEDGEN:815981","OMIM:616483","UMLS:C3809651"],"synonyms":[{"name":"ILFS2","type":"exact"},{"name":"NBAS infantile liver failure","type":"exact"},{"name":"infantile liver failure caused by mutation in NBAS","type":"exact"},{"name":"infantile liver failure syndrome 2","type":"exact"},{"name":"infantile liver failure syndrome type 2","type":"exact"}],"termid":"MONDO:0014659","terms_by_termid":{"MONDO:0014659":null},"xrefs":{"Monarch":{"xref_id":"0014659"}}}


id: PBO:0026825
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_protein_localization_to_chromatin_at_replication_origin","termid":"PBO:0026825"}


id: GO:0019791
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete FAT10 hydrolase activity (obsolete GO:0019791)","synonyms":[{"name":"FAT10 hydrolase activity","type":"exact"}],"termid":"GO:0019791"}


id: GO:0019643
data:
  {"annotated_genes":["SJAG_03920"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118617],"is_not":false,"summary":null,"term":"GO:0019643"}]},"cv_name":"biological_process","definition":"A pathway leading to the fixation of two molecules of CO2 and the production of one molecule of acetyl-CoA; essentially the oxidative TCA cycle running in reverse. Acetyl-CoA is reductively carboxylated to pyruvate, from which all other central metabolites can be formed. Most of the enzymes of reductive and oxidative TCA cycle are shared, with the exception of three key enzymes that allow the cycle to run in reverse: ATP citrate lyase, 2-oxoglutarate:ferredoxin oxidoreductase, and fumarate reductase. 2-oxoglutarate:ferredoxin oxidoreductase catalyzes the carboxylation of succinyl-CoA to 2-oxoglutarate, ATP citrate lyase the ATP-dependent cleavage of citrate to acetyl-CoA and oxaloacetate, and fumarate reductase the reduction of fumarate forming succinate.","definition_xrefs":["GOC:jl","PMID:15838028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon fixation","termid":"GO:0015977"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03920":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reductive tricarboxylic acid cycle","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0019644"],"synonyms":[{"name":"reductive Kreb's cycle","type":"exact"},{"name":"reductive TCA cycle","type":"exact"},{"name":"reductive carboxylate cycle","type":"exact"},{"name":"reductive carboxylic acid cycle","type":"exact"},{"name":"reductive citric acid pathway","type":"exact"}],"termid":"GO:0019643","terms_by_termid":{"GO:0019643":null}}


id: PR:P0CT62
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps3001 gene.","definition_xrefs":["UniProtKB:P0CT62","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S30-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19B12.04","synonyms":[{"name":"Spom972h-rps3001","type":"exact"}],"termid":"PR:P0CT62"}


id: PBO:0091367
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"swi5delta rad57delta double mutant produced each recombination class (gene conversion, crossover and long tract gene conversion) at frequencies similar to that of the rad51delta single mutant","termid":"PBO:0091367"}


id: PBO:0048910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member E, pseudogene","termid":"PBO:0048910"}


id: PBO:0109380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 11","termid":"PBO:0109380"}


id: PBO:0057176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 328","termid":"PBO:0057176"}


id: PBO:0004686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 domain protein Git1","termid":"PBO:0004686"}


id: PBO:0090131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V0 subunit c' (proteolipid subunit)","termid":"PBO:0090131"}


id: MONDO:0010726
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A severe neurodevelopmental disorder affecting the central nervous system.","definition_xrefs":["Orphanet:778"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"excluded_subClassOf","term_name":"obsolete motor stereotypies (obsolete MONDO:0017656)","termid":"MONDO:0017656"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"pervasive developmental disorder","termid":"MONDO:0000594"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"Rett syndrome","secondary_identifiers":["NANDO:1200603","icd11.foundation:201200685","NORD:1666","OMIM:312750","DOID:1206","NANDO:2100219","MedDRA:10039000","SCTID:68618008","NANDO:1200604","ICD9:330.8","NCIT:C75488","MEDGEN:48441","UMLS:C0035372","NANDO:2200825","GARD:5696","MESH:D015518"],"synonyms":[{"name":"RTS","type":"exact"},{"name":"RTT","type":"exact"},{"name":"Rett syndrome","type":"exact"},{"name":"Rett syndrome, X-linked dominant","type":"exact"},{"name":"Rett syndrome, Zappella variant","type":"related"},{"name":"Rett syndrome, atypical","type":"related"},{"name":"Rett syndrome, atypical, X-linked dominant","type":"exact"},{"name":"Rett syndrome, preserved speech variant","type":"related"},{"name":"Rett syndrome, preserved speech variant, X-linked dominant","type":"exact"},{"name":"Rett's disorder","type":"exact"},{"name":"Rett’s disease","type":"exact"},{"name":"autism, dementia, ataxia, and loss of purposeful hand use","type":"related"},{"name":"cerebroatrophic hyperammonemia","type":"exact"}],"termid":"MONDO:0010726","xrefs":{"Monarch":{"xref_id":"0010726"}}}


id: MONDO:0013812
data:
  {"annotated_genes":["SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88245],"is_not":false,"summary":null,"term":"MONDO:0013812"}]},"cv_name":"mondo","definition":"Any Baraitser-Winter cerebrofrontofacial syndrome in which the cause of the disease is a mutation in the ACTG1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Baraitser-Winter cerebrofrontofacial syndrome","termid":"MONDO:0017579"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"Baraitser-winter syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0081113","MEDGEN:482865","GARD:15817","OMIM:614583","UMLS:C3281235"],"synonyms":[{"name":"ACTG1 Baraitser-Winter cerebrofrontofacial syndrome","type":"exact"},{"name":"BRWS2","type":"related"},{"name":"Baraitser-WINTER syndrome 2","type":"related"},{"name":"Baraitser-Winter cerebrofrontofacial syndrome caused by mutation in ACTG1","type":"exact"},{"name":"Baraitser-Winter syndrome type 2","type":"exact"},{"name":"Baraitser-winter syndrome 2","type":"exact"}],"termid":"MONDO:0013812","terms_by_termid":{"MONDO:0013812":null},"xrefs":{"Monarch":{"xref_id":"0013812"}}}


id: MONDO:0005842
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or chronic inflammatory process affecting the mucous membrane of the maxillary sinus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sinusitis","termid":"MONDO:0005961"},{"relation_name":"is_a","term_name":"mouth disorder","termid":"MONDO:0006858"},{"relation_name":"is_a","term_name":"disorder of facial skeleton","termid":"MONDO:0023369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maxillary sinusitis","secondary_identifiers":["UMLS:C0024959","SCTID:88348008","NCIT:C34809","MESH:D015523","DOID:2051","EFO:0007361","MEDGEN:44313"],"termid":"MONDO:0005842","xrefs":{"Monarch":{"xref_id":"0005842"}}}


id: GO:0045464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into an R8 cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["PMID:11880339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoreceptor cell fate specification","termid":"GO:0043704"},{"relation_name":"part_of","term_name":"R8 cell fate commitment","termid":"GO:0007460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"R8 cell fate specification","termid":"GO:0045464"}


id: PBO:0120181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the MPP10 chaperone complex and the small subunit (SSU) processome; contains both U3 snoRNA and rRNA primary transcript binding activity, as well as RNA chaperone activity; SSU processome is required for pre-18S rRNA processing; interacts with Mpp10p; member of a superfamily of proteins that contain a sigma(70)-like motif and associate with RNAs","termid":"PBO:0120181"}


id: PBO:0044612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 13 pseudogene 3","termid":"PBO:0044612"}


id: MONDO:0016545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Leukoencephalopathy-palmoplantar keratoderma syndrome is a rare, genetic epidermal disease characterized by early childhood-onset of punctate palmoplantar keratoderma in association with adult-onset leukoencephalopathy manifested by progressive tetrapyramidal syndrome and cognitive deterioration.","definition_xrefs":["Orphanet:2386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"leukoencephalopathy-palmoplantar keratoderma syndrome","secondary_identifiers":["MEDGEN:1652044","UMLS:C4749769","GARD:3232"],"synonyms":[{"name":"leukoencephalopathy palmoplantar keratoderma","type":"related"}],"termid":"MONDO:0016545","xrefs":{"Monarch":{"xref_id":"0016545"}}}


id: GO:0007425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process in which a cell becomes capable of differentiating autonomously into an epithelial cell within an open tracheal system regardless of its environment; upon determination, the cell fate cannot be reversed. Tracheal cells are set aside as 10 clusters of approximately 80 cells on each side of the embryo (termed tracheal placodes). An example of this is found in Drosophila melanogaster.","definition_xrefs":["PMID:11063940","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"open tracheal system development","termid":"GO:0007424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell fate determination, open tracheal system","secondary_identifiers":["GO:0046846"],"synonyms":[{"name":"tracheal cell fate determination","type":"broad"},{"name":"tracheal epithelial cell fate determination","type":"exact"},{"name":"tracheal placode cell fate determination","type":"related"}],"termid":"GO:0007425"}


id: PBO:0082278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Anthranilate synthase; catalyzes the initial step of tryptophan biosynthesis, forms multifunctional hetero-oligomeric anthranilate synthase:indole-3-glycerol phosphate synthase enzyme complex with Trp3p","termid":"PBO:0082278"}


id: PBO:0091918
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FrataXiN","termid":"PBO:0091918"}


id: GO:2000184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of progesterone biosynthetic process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of steroid biosynthetic process","termid":"GO:0010893"},{"relation_name":"is_a","term_name":"positive regulation of hormone biosynthetic process","termid":"GO:0046886"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of progesterone biosynthetic process","termid":"GO:2000182"},{"relation_name":"positively_regulates","term_name":"progesterone biosynthetic process","termid":"GO:0006701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"positive regulation of progesterone biosynthetic process","synonyms":[{"name":"positive regulation of progesterone anabolism","type":"exact"},{"name":"positive regulation of progesterone biosynthesis","type":"exact"},{"name":"positive regulation of progesterone formation","type":"exact"},{"name":"positive regulation of progesterone synthesis","type":"exact"}],"termid":"GO:2000184"}


id: PBO:0061387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 47","termid":"PBO:0061387"}


id: GO:1902966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to early endosome.","definition_xrefs":["GOC:sjp","GOC:TermGenie","PMID:22621900","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to early endosome","termid":"GO:1902965"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to endosome","termid":"GO:1905668"},{"relation_name":"positively_regulates","term_name":"protein localization to early endosome","termid":"GO:1902946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to early endosome","synonyms":[{"name":"activation of protein localisation in early endosome","type":"narrow"},{"name":"activation of protein localisation to early endosome","type":"narrow"},{"name":"activation of protein localization in early endosome","type":"narrow"},{"name":"activation of protein localization to early endosome","type":"narrow"},{"name":"positive regulation of protein localisation in early endosome","type":"exact"},{"name":"positive regulation of protein localisation to early endosome","type":"exact"},{"name":"positive regulation of protein localization in early endosome","type":"exact"},{"name":"up regulation of protein localisation in early endosome","type":"exact"},{"name":"up regulation of protein localisation to early endosome","type":"exact"},{"name":"up regulation of protein localization in early endosome","type":"exact"},{"name":"up regulation of protein localization to early endosome","type":"exact"},{"name":"up-regulation of protein localisation in early endosome","type":"exact"},{"name":"up-regulation of protein localisation to early endosome","type":"exact"},{"name":"up-regulation of protein localization in early endosome","type":"exact"},{"name":"up-regulation of protein localization to early endosome","type":"exact"},{"name":"upregulation of protein localisation in early endosome","type":"exact"},{"name":"upregulation of protein localisation to early endosome","type":"exact"},{"name":"upregulation of protein localization in early endosome","type":"exact"},{"name":"upregulation of protein localization to early endosome","type":"exact"}],"termid":"GO:1902966"}


id: PBO:0058964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"makorin ring finger protein 7, pseudogene","termid":"PBO:0058964"}


id: GO:1900179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of aflatoxin biosynthetic process.","definition_xrefs":["GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of aflatoxin biosynthetic process","termid":"GO:1900177"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"positively_regulates","term_name":"aflatoxin biosynthetic process","termid":"GO:0045122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of aflatoxin biosynthetic process","synonyms":[{"name":"activation of aflatoxin anabolism","type":"narrow"},{"name":"activation of aflatoxin biosynthesis","type":"narrow"},{"name":"activation of aflatoxin biosynthetic process","type":"narrow"},{"name":"activation of aflatoxin formation","type":"narrow"},{"name":"activation of aflatoxin synthesis","type":"narrow"},{"name":"positive regulation of aflatoxin anabolism","type":"exact"},{"name":"positive regulation of aflatoxin biosynthesis","type":"exact"},{"name":"positive regulation of aflatoxin formation","type":"exact"},{"name":"positive regulation of aflatoxin synthesis","type":"exact"},{"name":"up regulation of aflatoxin anabolism","type":"exact"},{"name":"up regulation of aflatoxin biosynthesis","type":"exact"},{"name":"up regulation of aflatoxin biosynthetic process","type":"exact"},{"name":"up regulation of aflatoxin formation","type":"exact"},{"name":"up regulation of aflatoxin synthesis","type":"exact"},{"name":"up-regulation of aflatoxin anabolism","type":"exact"},{"name":"up-regulation of aflatoxin biosynthesis","type":"exact"},{"name":"up-regulation of aflatoxin biosynthetic process","type":"exact"},{"name":"up-regulation of aflatoxin formation","type":"exact"},{"name":"up-regulation of aflatoxin synthesis","type":"exact"},{"name":"upregulation of aflatoxin anabolism","type":"exact"},{"name":"upregulation of aflatoxin biosynthesis","type":"exact"},{"name":"upregulation of aflatoxin biosynthetic process","type":"exact"},{"name":"upregulation of aflatoxin formation","type":"exact"},{"name":"upregulation of aflatoxin synthesis","type":"exact"}],"termid":"GO:1900179"}


id: PBO:0062456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 129 pseudogene","termid":"PBO:0062456"}


id: PBO:0086604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression regulated by copper levels","termid":"PBO:0086604"}


id: PBO:0028005
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete_mitotic_sister_chromatid_segregation,_with_phi-shaped_DNA_mass","termid":"PBO:0028005"}


id: PBO:0081264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF32 antisense RNA 2","termid":"PBO:0081264"}


id: PATO:0000469
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000469 high (obsolete PATO:0000469)","termid":"PATO:0000469"}


id: PBO:0078228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 12-3","termid":"PBO:0078228"}


id: PBO:0040692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCDIN3 domain containing RNA methyltransferase","termid":"PBO:0040692"}


id: GO:1903798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of microRNA processing.","definition_xrefs":["GOC:BHF_miRNA","GO_REF:0000058","GOC:rph","PMID:22269326","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of regulatory ncRNA processing","termid":"GO:0070920"},{"relation_name":"regulates","term_name":"miRNA processing","termid":"GO:0035196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of miRNA processing","synonyms":[{"name":"regulation of gene silencing by miRNA, production of miRNAs","type":"exact"},{"name":"regulation of miRNA biogenesis","type":"related"},{"name":"regulation of miRNA maturation","type":"narrow"},{"name":"regulation of microRNA biogenesis","type":"related"},{"name":"regulation of microRNA biosynthesis","type":"related"},{"name":"regulation of microRNA biosynthetic process","type":"related"},{"name":"regulation of microRNA metabolic process","type":"related"},{"name":"regulation of microRNA metabolism","type":"related"},{"name":"regulation of microRNA processing","type":"broad"},{"name":"regulation of microRNA-mediated gene silencing, production of microRNAs","type":"exact"}],"termid":"GO:1903798"}


id: FYPO:0006722
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the Cdr2 medial cortical node complex is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:28924043","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000138","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to Cdr2 medial cortical node complex","synonyms":[{"name":"normal protein localisation to Cdr2 medial cortical node complex","type":"exact"},{"name":"normal protein localization to Cdr2 medial cortical node complex during mitotic cell cycle","type":"related"},{"name":"normal protein localization to Cdr2 medial cortical node complex during vegetative growth","type":"exact"}],"termid":"FYPO:0006722"}


id: GO:0034056
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an estrogen response element (ERE), a conserved sequence found in the promoters of genes whose expression is regulated in response to estrogen.","definition_xrefs":["GOC:ecd","PMID:17975005","PMID:15036253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding","termid":"GO:0000978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0000976","GO:0005488"],"is_obsolete":false,"name":"estrogen response element binding","synonyms":[{"name":"ERE binding","type":"exact"}],"termid":"GO:0034056"}


id: PBO:0064230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C eta 1","termid":"PBO:0064230"}


id: GO:0004156
data:
  {"annotated_genes":["SJAG_00815"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81533],"is_not":false,"summary":null,"term":"GO:0004156"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate + 4-aminobenzoate = diphosphate + dihydropteroate.","definition_xrefs":["EC:2.5.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00815":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016765","GO:0003674"],"is_obsolete":false,"name":"dihydropteroate synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:19949","MetaCyc:H2PTEROATESYNTH-RXN"],"synonyms":[{"name":"(2-amino-4-hydroxy-7,8-dihydropteridin-6-yl)methyl-diphosphate:4-aminobenzoate 2-amino-4-hydroxydihydropteridine-6-methenyltransferase activity","type":"related"},{"name":"2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine-diphosphate:4-aminobenzoate 2-amino-4-hydroxydihydropteridine-6-methenyltransferase activity","type":"related"},{"name":"7,8-dihydropteroate synthase activity","type":"related"},{"name":"7,8-dihydropteroate synthetase activity","type":"related"},{"name":"7,8-dihydropteroic acid synthetase activity","type":"related"},{"name":"DHPS activity","type":"related"},{"name":"dihydropteroate diphosphorylase activity","type":"related"},{"name":"dihydropteroate pyrophosphorylase activity","type":"related"},{"name":"dihydropteroate synthetase activity","type":"related"},{"name":"dihydropteroic synthetase activity","type":"related"}],"termid":"GO:0004156","terms_by_termid":{"GO:0004156":null}}


id: PBO:0002081
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sh3 Homology Domain","termid":"PBO:0002081"}


id: PBO:0000136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor (predicted)","termid":"PBO:0000136"}


id: PBO:0050029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA-DQB1 antisense RNA 1","termid":"PBO:0050029"}


id: PBO:0047395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBXO34 antisense RNA 1","termid":"PBO:0047395"}


id: PR:Q09815
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pom2 gene.","definition_xrefs":["UniProtKB:Q09815","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16C9.07","synonyms":[{"name":"Spom972h-pom2","type":"exact"},{"name":"meiotically up-regulated gene 189 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09815"}


id: PBO:0068605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 56, pseudogene","termid":"PBO:0068605"}


id: PBO:0044900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"derlin 2","termid":"PBO:0044900"}


id: PBO:0003825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prospore membrane protein Mcp4/Mug101","termid":"PBO:0003825"}


id: PBO:0017815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Ubc14 (predicted)","termid":"PBO:0017815"}


id: FYPO:0003070
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a single-stranded DNA 5'-3' exodeoxyribonuclease activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"},{"relation_name":"is_a","term_name":"abnormal nuclease activity","termid":"FYPO:0003163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0005447","FYPO:0000661","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal single-stranded DNA 5'-3' exodeoxyribonuclease activity","termid":"FYPO:0003070"}


id: GO:0050046
data:
  {"annotated_genes":["SJAG_00717","SJAG_03509"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91477,109367],"is_not":false,"summary":null,"term":"GO:0050046"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a delta(7)-sterol + 2 ferrocytochrome b5 + O2 + 2 H+ -> a delta(5,7)-sterol + 2 ferricytochrome b5 + 2 H2O.","definition_xrefs":["RHEA:54320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol desaturase activity","termid":"GO:0070704"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00717":null,"SJAG_03509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"delta7-sterol 5(6)-desaturase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-16378","EC:1.14.19.20"],"synonyms":[{"name":"5-DES","type":"related"},{"name":"delta7-sterol 5-desaturase activity","type":"related"},{"name":"delta7-sterol delta5-dehydrogenase activity","type":"related"},{"name":"delta7-sterol-C5(6)-desaturase activity","type":"related"},{"name":"lathosterol 5-desaturase activity","type":"related"},{"name":"lathosterol oxidase activity","type":"exact"}],"termid":"GO:0050046","terms_by_termid":{"GO:0050046":null}}


id: MONDO:0020525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Transient neonatal diabetes mellitus (TNDM) is a genetically heterogeneous form of neonatal diabetes (NDM) characterized by hyperglycemia presenting in the neonatal period that remits during infancy but recurs in later life in most patients.","definition_xrefs":["Orphanet:99886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neonatal diabetes mellitus","termid":"MONDO:0016391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005015","MONDO:0005066"],"is_obsolete":false,"name":"transient neonatal diabetes mellitus","secondary_identifiers":["UMLS:C0342273","icd11.foundation:1596856936","DOID:0060334","NCIT:C114899","SCTID:237603002","HP:0008255","MEDGEN:449530"],"synonyms":[{"name":"TNDM","type":"exact"},{"name":"chromosome 6-associated transient diabetes mellitus","type":"related"},{"name":"diabetes mellitus, 6q24-related transient neonatal","type":"related"},{"name":"diabetes mellitus, transient neonatal","type":"related"},{"name":"transient neonatal diabetes mellitus","type":"exact"},{"name":"transient neonatal diabetes mellitus (disease)","type":"exact"}],"termid":"MONDO:0020525","xrefs":{"Monarch":{"xref_id":"0020525"}}}


id: GO:1904290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitotic DNA damage checkpoint.","definition_xrefs":["GOC:kmv","GOC:TermGenie","PMID:16549501","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cell cycle","termid":"GO:0045931"},{"relation_name":"is_a","term_name":"regulation of mitotic DNA damage checkpoint","termid":"GO:1904289"},{"relation_name":"is_a","term_name":"negative regulation of DNA damage checkpoint","termid":"GO:2000002"},{"relation_name":"negatively_regulates","term_name":"mitotic DNA damage checkpoint signaling","termid":"GO:0044773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0023052","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitotic DNA damage checkpoint","synonyms":[{"name":"down regulation of mitotic DNA damage checkpoint","type":"exact"},{"name":"down-regulation of mitotic DNA damage checkpoint","type":"exact"},{"name":"downregulation of mitotic DNA damage checkpoint","type":"exact"},{"name":"inhibition of mitotic DNA damage checkpoint","type":"narrow"}],"termid":"GO:1904290"}


id: GO:0007026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of microtubule polymerization or depolymerization","termid":"GO:0031111"},{"relation_name":"is_a","term_name":"regulation of microtubule depolymerization","termid":"GO:0031114"},{"relation_name":"is_a","term_name":"negative regulation of protein depolymerization","termid":"GO:1901880"},{"relation_name":"is_a","term_name":"negative regulation of supramolecular fiber organization","termid":"GO:1902904"},{"relation_name":"negatively_regulates","term_name":"microtubule depolymerization","termid":"GO:0007019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"negative regulation of microtubule depolymerization","synonyms":[{"name":"down regulation of microtubule depolymerization","type":"exact"},{"name":"down-regulation of microtubule depolymerization","type":"exact"},{"name":"downregulation of microtubule depolymerization","type":"exact"},{"name":"inhibition of microtubule depolymerization","type":"narrow"},{"name":"microtubule rescue","type":"narrow"},{"name":"microtubule stabilization","type":"exact"},{"name":"negative regulation of microtubule catastrophe","type":"narrow"},{"name":"negative regulation of microtubule disassembly","type":"exact"}],"termid":"GO:0007026"}


id: PBO:0039121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allograft inflammatory factor 1","termid":"PBO:0039121"}


id: FYPO:0007632
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the acetylation of lysine at position 16 of histone H4 occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone acetylation during vegetative growth","termid":"FYPO:0000332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0002274","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H4-K16 acetylation during vegetative growth","synonyms":[{"name":"increased histone H4-K16 acetylation during mitotic cell cycle","type":"related"},{"name":"increased histone H4K16 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0007632"}


id: PBO:0065340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prune homolog 2 with BCH domain","termid":"PBO:0065340"}


id: PBO:0043896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich protein 1 pseudogene 3","termid":"PBO:0043896"}


id: GO:1901967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to iron ion starvation.","definition_xrefs":["PMID:23115244","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to nutrient levels","termid":"GO:0032108"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cellular response to iron ion starvation","termid":"GO:1901966"},{"relation_name":"negatively_regulates","term_name":"cellular response to iron ion starvation","termid":"GO:0010106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to iron ion starvation","synonyms":[{"name":"down regulation of cellular response to iron ion starvation","type":"exact"},{"name":"down-regulation of cellular response to iron ion starvation","type":"exact"},{"name":"downregulation of cellular response to iron ion starvation","type":"exact"},{"name":"inhibition of cellular response to iron ion starvation","type":"narrow"}],"termid":"GO:1901967"}


id: PBO:0091477
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I:g.3460318_3460319insC","termid":"PBO:0091477"}


id: PBO:0117039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARCHF10 antisense RNA 1","termid":"PBO:0117039"}


id: PBO:0051562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL12A antisense RNA 1","termid":"PBO:0051562"}


id: PBO:0027144
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_mitotic_G2_DNA_damage_checkpoint","termid":"PBO:0027144"}


id: PBO:0053610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 644","termid":"PBO:0053610"}


id: PBO:0066300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol binding protein 2","termid":"PBO:0066300"}


id: PBO:0052798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 38","termid":"PBO:0052798"}


id: PBO:0042378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD209 molecule","termid":"PBO:0042378"}


id: PATO:0002415
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Single lesion with expansion into surrounding tissue.","definition_xrefs":["PATOC:MPATH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localized","termid":"PATO:0000627"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focally extensive","termid":"PATO:0002415"}


id: SO:1000185
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant effect, causing an intron to be gained by the processed transcript; usually a result of a donor acceptor mutation (SO:1000072).","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000185 sequence_variant_causes_intron_gain (obsolete SO:1000185)","synonyms":[{"name":"mutation causes intron gain","type":"related"},{"name":"sequence variant causes intron gain","type":"exact"}],"termid":"SO:1000185"}


id: PBO:0051348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2D-36 (pseudogene)","termid":"PBO:0051348"}


id: PBO:0088665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-GATA type, iron-sensing Fep1","termid":"PBO:0088665"}


id: MONDO:0021379
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the epicardium.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart neoplasm","termid":"MONDO:0021209"},{"relation_name":"is_a","term_name":"neoplasm of pericardium","termid":"MONDO:0021381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"neoplasm of epicardium","secondary_identifiers":["UMLS:C1290403","MEDGEN:224850","NCIT:C5347","ICD9:239.89","SCTID:126733004"],"synonyms":[{"name":"epicardial neoplasm","type":"exact"},{"name":"epicardial tumor","type":"exact"},{"name":"epicardial tumour","type":"exact"},{"name":"epicardium neoplasm","type":"exact"},{"name":"epicardium neoplasm (disease)","type":"exact"},{"name":"epicardium tumor","type":"exact"},{"name":"epicardium tumour","type":"exact"},{"name":"neoplasm of epicardium","type":"exact"},{"name":"neoplasm of the epicardium","type":"exact"},{"name":"tumor of epicardium","type":"exact"},{"name":"tumor of the epicardium","type":"exact"},{"name":"tumour of epicardium","type":"exact"},{"name":"tumour of the epicardium","type":"exact"}],"termid":"MONDO:0021379","xrefs":{"Monarch":{"xref_id":"0021379"}}}


id: PBO:0034153
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_deep_homology_relationship_with","termid":"PBO:0034153"}


id: PBO:0081115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger AN1-type containing 4","termid":"PBO:0081115"}


id: GO:0044310
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded vesicle found predominantly in Plasmodium female gametocytes, that becomes progressively more abundant as the gametocyte reaches full maturity. These vesicles lie beneath the subpellicular membrane of the gametocyte, and the release of their contents into the parasitophorous vacuole has been postulated to aid in the escape of gametocytes from the erythrocyte after ingestion by the mosquito.","definition_xrefs":["GOC:jl","PMID:18086189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"osmiophilic body","termid":"GO:0044310"}


id: GO:0006800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH).","definition_xrefs":["PMID:12115731","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxygen and reactive oxygen species metabolic process (obsolete GO:0006800)","synonyms":[{"name":"oxygen and AOS metabolism","type":"exact"},{"name":"oxygen and ROI metabolism","type":"exact"},{"name":"oxygen and ROS metabolic process","type":"exact"},{"name":"oxygen and ROS metabolism","type":"exact"},{"name":"oxygen and active oxygen species metabolism","type":"exact"},{"name":"oxygen and reactive oxidative species metabolism","type":"exact"},{"name":"oxygen and reactive oxygen intermediate metabolism","type":"exact"},{"name":"oxygen and reactive oxygen species metabolic process","type":"exact"},{"name":"oxygen and reactive oxygen species metabolism","type":"exact"}],"termid":"GO:0006800"}


id: GO:0032865
data:
  {"annotated_genes":["SJAG_01929","SJAG_03710","SJAG_04370","SJAG_01305","SJAG_03416"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71683,71726,76510,81816,118473],"is_not":false,"summary":null,"term":"GO:0032865"}]},"cv_name":"cellular_component","definition":"A protein complex that links the endoplasmic reticulum with mitochondria and may have a role in promoting exchange of calcium and phospholipids between the two organelles.","definition_xrefs":["PMID:19556461","GOC:mcc","PMID:29279306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"outer mitochondrial membrane protein complex","termid":"GO:0098799"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"mitochondria-associated endoplasmic reticulum membrane contact site","termid":"GO:0044233"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01305":null,"SJAG_01929":null,"SJAG_03416":null,"SJAG_03710":null,"SJAG_04370":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005737","GO:0005739","GO:0032991","GO:0005575","GO:0005783"],"is_obsolete":false,"name":"ERMES complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ER-mitochondria encounter structure","type":"exact"},{"name":"MMM1 complex","type":"exact"},{"name":"Mdm10/Mdm12/Mmm1 complex","type":"exact"},{"name":"mitochore","type":"exact"}],"termid":"GO:0032865","terms_by_termid":{"GO:0032865":null}}


id: PBO:0078757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase activator subunit 11-2","termid":"PBO:0078757"}


id: GO:0016290
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: palmitoyl-CoA + H2O = CoA + palmitate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete palmitoyl-CoA hydrolase activity (obsolete GO:0016290)","synonyms":[{"name":"fatty acyl thioesterase I","type":"related"},{"name":"long-chain fatty-acyl-CoA hydrolase activity","type":"broad"},{"name":"palmitoyl coenzyme A hydrolase activity","type":"related"},{"name":"palmitoyl thioesterase activity","type":"related"},{"name":"palmitoyl-CoA deacylase activity","type":"related"},{"name":"palmityl thioesterase I","type":"related"},{"name":"palmityl thioesterase activity","type":"related"},{"name":"palmityl-CoA deacylase activity","type":"related"}],"termid":"GO:0016290"}


id: GO:0072707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sodium dodecyl sulfate (SDS) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to sodium dodecyl sulfate","termid":"GO:0072706"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sodium dodecyl sulfate","synonyms":[{"name":"cellular response to SDS","type":"exact"}],"termid":"GO:0072707"}


id: PBO:0072528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 57","termid":"PBO:0072528"}


id: PBO:0028071
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_aseptate_mononucleate_vegetative_cell","termid":"PBO:0028071"}


id: FYPO:0006070
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the addition of one or more adenylyl residues to the 3' end of a small RNA (sRNA) molecule occurs to a greater extent than normal.","definition_xrefs":["PMID:28541282","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0000294","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased small RNA 3' adenylation","synonyms":[{"name":"increased sRNA 3' adenylation","type":"exact"},{"name":"increased small RNA 3' adenylation during mitotic cell cycle","type":"related"},{"name":"increased small RNA 3' adenylation during vegetative growth","type":"exact"},{"name":"increased small regulatory RNA 3' adenylation","type":"exact"}],"termid":"FYPO:0006070"}


id: MONDO:0009370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"L-2-hydroxyglutaric aciduria is a primarily neurological form of 2-hydroxyglutaric aciduria characterized by psychomotor retardation, cerebellar ataxia and variable macrocephaly or epilepsy.","definition_xrefs":["Orphanet:79314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-hydroxyglutaric aciduria","termid":"MONDO:0016001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"L-2-hydroxyglutaric aciduria","secondary_identifiers":["GARD:10472","icd11.foundation:562958433","OMIM:236792","SCTID:237961001","DOID:0050574","MEDGEN:341029","UMLS:C1855995"],"synonyms":[{"name":"L-2-HGA","type":"exact"},{"name":"L-2-hydroxyglutaric acidemia","type":"exact"},{"name":"L-2-hydroxyglutaric aciduria","type":"exact"},{"name":"L2HGA","type":"related"}],"termid":"MONDO:0009370","xrefs":{"Monarch":{"xref_id":"0009370"}}}


id: _global:directly_positively_regulates_activity_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"The entity A, immediately upstream of the entity B, has an activity that positively regulates an activity performed by B. \\nFor example, A and B may be gene products and binding of B by A positively regulates the kinase activity of B.","direct_ancestors":[{"relation_name":"is_a","term_name":"directly_regulates_activity_of","termid":"_global:directly_regulates_activity_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_positively_regulates_activity_of","secondary_identifiers":["RO:0002450"],"synonyms":[{"name":"molecularly increases activity of","type":"exact"}],"termid":"_global:directly_positively_regulates_activity_of"}


id: PBO:0084678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial assembly factor; important for assembly of the mitochondrial respiratory chain bc1 complex (complex III), cytochrome oxidase (complex IV), and the complex III-complex IV supercomplex; embedded in the mitochondrial inner membrane, facing the intermembrane space","termid":"PBO:0084678"}


id: PR:Q9UUA9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-rRNA-processing protein TSR2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21250:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-rRNA-processing protein tsr2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.15","secondary_identifiers":["UniProtKB:Q9UUA9"],"synonyms":[{"name":"SPBC409.15","type":"related"},{"name":"Spom972h-TSR2","type":"exact"}],"termid":"PR:Q9UUA9"}


id: PBO:0075550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm flagellar 2","termid":"PBO:0075550"}


id: MONDO:0022007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition resulting from the excessive retention of water with sodium depletion.","definition_xrefs":["MESH:D014869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"water intoxication","secondary_identifiers":["UMLS:C0043049","MEDGEN:53061","SCTID:71785001"],"synonyms":[{"name":"WATER INTOX","type":"related"},{"name":"Water Intoxication","type":"related"},{"name":"Water intoxication","type":"related"},{"name":"Water intoxication syndrome","type":"related"},{"name":"water intoxication syndrome","type":"exact"}],"termid":"MONDO:0022007","xrefs":{"Monarch":{"xref_id":"0022007"}}}


id: PBO:0042221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCNQ pseudogene 2","termid":"PBO:0042221"}


id: MONDO:0006763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A painful inflammatory process leads to a mechanical block in active and passive range of motion (ROM) of the shoulder. Adhesive capsulitis of the shoulder is characterized by functional loss of passive and active shoulder motion. This inflammatory process results in fibroblastic proliferation and extensive scar tissue formation. Fibroblastic proliferation, a late phase of the inflammatory process involved in tissue repair, leads to thickening, fibrosis, and adhesion of the capsule to itself and the humerus.","definition_xrefs":["PMID:34772852"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"muscle tissue disorder","termid":"MONDO:0003939"},{"relation_name":"is_a","term_name":"arthropathy","termid":"MONDO:0006816"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frozen shoulder","secondary_identifiers":["MESH:D002062","UMLS:C0311223","EFO:1000941","DOID:14188","ICD10CM:M75.0","ICD9:726.0","SCTID:399114005","MEDGEN:90227","MedDRA:10017391"],"synonyms":[{"name":"adhesions-capsulitis,shoulder","type":"exact"},{"name":"adhesive capsulitis","type":"exact"},{"name":"adhesive capsulitis of shoulder","type":"exact"}],"termid":"MONDO:0006763","xrefs":{"Monarch":{"xref_id":"0006763"}}}


id: MOD:02037
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, Hex(7) HexNAc(2)","definition_xrefs":["PubMed:33135055","Unimod:1480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"Hex7HexNAc2 N4-glycosylated asparagine","synonyms":[{"name":"M7/Man7","type":"related"}],"termid":"MOD:02037"}


id: GO:0014732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process, occurring in skeletal muscle, that is characterized by a decrease in protein content, fiber diameter, force production and fatigue resistance in response to different conditions such as starvation, aging and disuse.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle atrophy","termid":"GO:0014891"},{"relation_name":"is_a","term_name":"skeletal muscle adaptation","termid":"GO:0043501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle atrophy","termid":"GO:0014732"}


id: PBO:0064185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLA2G10 pseudogene 1","termid":"PBO:0064185"}


id: GO:0048563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Morphogenesis, during the post-embryonic phase, of an animal tissue or tissues that work together to perform a specific function or functions. Morphogenesis pertains to process in which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete post-embryonic animal organ morphogenesis (obsolete GO:0048563)","termid":"GO:0048563"}


id: MONDO:0017516
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic brachydactyly of fingers","termid":"MONDO:0017451"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly of fingers, bilateral","secondary_identifiers":["Orphanet:295130","UMLS:C4751023","MEDGEN:1665318","icd11.foundation:412618992"],"synonyms":[{"name":"short fingers, bilateral","type":"exact"}],"termid":"MONDO:0017516","xrefs":{"Monarch":{"xref_id":"0017516"}}}


id: SO:0001773
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant where the mutated gene product does not allow for one or more basic functions necessary for survival.","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_abnormal","termid":"SO:0002218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal_variant","synonyms":[{"name":"lethal variant","type":"exact"}],"termid":"SO:0001773"}


id: GO:0035012
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The terminal region of a polytene chromosome.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete polytene chromosome, telomeric region (obsolete GO:0035012)","termid":"GO:0035012"}


id: PBO:0057337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 523","termid":"PBO:0057337"}


id: PBO:0077113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 22","termid":"PBO:0077113"}


id: PBO:0091301
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript retaining intron IV represents 15% of total mRNA","termid":"PBO:0091301"}


id: GO:0006520
data:
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id: FYPO:0001065
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{"annotated_genes":["SJAG_04677","SJAG_02240","SJAG_04870","SJAG_02578","SJAG_01694","SJAG_01353","SJAG_01713","SJAG_02968","SJAG_00822","SJAG_03862","SJAG_04096","SJAG_04757","SJAG_03866","SJAG_04760","SJAG_02080","SJAG_02834","SJAG_04892","SJAG_04698","SJAG_04607","SJAG_00244","SJAG_04185","SJAG_02019","SJAG_00222","SJAG_02532","SJAG_02457","SJAG_04031","SJAG_00668","SJAG_00916","SJAG_03793","SJAG_01990","SJAG_00532","SJAG_02399","SJAG_00792","SJAG_03516","SJAG_02474","SJAG_03519","SJAG_03850","SJAG_04032","SJAG_03631","SJAG_03644","SJAG_01803","SJAG_03624","SJAG_04167","SJAG_00923","SJAG_04675","SJAG_00328","SJAG_00802","SJAG_04743","SJAG_00232","SJAG_01078","SJAG_03061","SJAG_04111","SJAG_04028","SJAG_04242","SJAG_02883","SJAG_02735","SJAG_01400","SJAG_01007","SJAG_01000","SJAG_04867","SJAG_04584","SJAG_04403","SJAG_01435","SJAG_01004","SJAG_02847","SJAG_03667","SJAG_03528","SJAG_03401","SJAG_01541","SJAG_03879","SJAG_05325"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102304,95921,114651,59630,79462],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010106"},{"annotations":[75156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055064"},{"annotations":[72530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032468"},{"annotations":[80158,74159,75254,99921,75334,81931,110639,72826,101734,73178,76903,81978,120452,71858,75400,115217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006874"},{"annotations":[76786,101978,79786,94948,109688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006878"},{"annotations":[59283,76018,72905,79787,94117,95867,76787,77498,106079,79925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006879"},{"annotations":[72042,76229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010961"},{"annotations":[77496,75436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030026"},{"annotations":[98995,116907,104416,93949,64035,109409,104417,90526,109529,110875,104415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030643"},{"annotations":[72408,101735,73962,97253,79845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030007"},{"annotations":[105994,78938,101979,116202,96537,77649,74541,76483,80053,105393,106134,75922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006882"},{"annotations":[105604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033212"},{"annotations":[115068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098711"},{"annotations":[57722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010960"},{"annotations":[75157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055075"},{"annotations":[79460,94261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033215"},{"annotations":[62948,71055,62621],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033214"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of inorganic ions within an organism or cell.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical 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ion homeostasis","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"termid":"GO:0098771","terms_by_termid":{"GO:0006874":null,"GO:0006878":null,"GO:0006879":null,"GO:0006882":null,"GO:0010106":null,"GO:0010960":null,"GO:0010961":null,"GO:0030007":null,"GO:0030026":null,"GO:0030643":null,"GO:0032468":null,"GO:0033212":null,"GO:0033214":null,"GO:0033215":null,"GO:0055064":null,"GO:0055075":null,"GO:0098711":null}}


id: PBO:0064857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 15A","termid":"PBO:0064857"}


id: PBO:0027930
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_cellular_response_to_heat","termid":"PBO:0027930"}


id: GO:1905648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of shell calcification.","definition_xrefs":["PMID:14648763","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biomineral tissue development","termid":"GO:0070167"},{"relation_name":"regulates","term_name":"shell calcification","termid":"GO:0031215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of shell calcification","termid":"GO:1905648"}


id: PBO:0029054
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_degradation","termid":"PBO:0029054"}


id: PBO:0000904
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.6.2","termid":"PBO:0000904"}


id: GO:0048325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of axial mesoderm cell fate determination.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of axial mesodermal cell fate determination","termid":"GO:0048324"},{"relation_name":"is_a","term_name":"negative regulation of mesodermal cell fate determination","termid":"GO:0048335"},{"relation_name":"negatively_regulates","term_name":"axial mesodermal cell fate determination","termid":"GO:0048323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of axial mesodermal cell fate determination","synonyms":[{"name":"down regulation of axial mesodermal cell fate determination","type":"exact"},{"name":"down-regulation of axial mesodermal cell fate determination","type":"exact"},{"name":"downregulation of axial mesodermal cell fate determination","type":"exact"},{"name":"inhibition of axial mesodermal cell fate determination","type":"narrow"}],"termid":"GO:0048325"}


id: PBO:0034707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase Tgs1","termid":"PBO:0034707"}


id: GO:0015520
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + tetracycline(in) = H+(in) + tetracycline(out).","definition_xrefs":["TC:2.A.1.2.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetracycline transmembrane transporter activity","termid":"GO:0008493"},{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"tetracycline:proton antiporter activity","synonyms":[{"name":"tetracyclin:hydrogen antiporter activity","type":"exact"},{"name":"tetracyclin:proton antiporter activity","type":"exact"},{"name":"tetracycline:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0015520"}


id: MONDO:1012555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitral valve dysplasia, non-human animal","termid":"MONDO:1011652"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitral valve dysplasia, domestic cat","secondary_identifiers":["OMIA:002521-9685"],"termid":"MONDO:1012555","xrefs":{"Monarch":{"xref_id":"1012555"}}}


id: GO:0072518
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Rho GTPase-dependent catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein.","definition_xrefs":["GOC:ecd","PMID:12778124","PMID:20230755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0004672","GO:0140096","GO:0016740","GO:0003674","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"Rho-dependent protein serine/threonine kinase activity","synonyms":[{"name":"ROCK kinase activity","type":"exact"},{"name":"Rho-associated protein kinase activity","type":"exact"}],"termid":"GO:0072518"}


id: PBO:0051359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2/OR22-4 (pseudogene)","termid":"PBO:0051359"}


id: MONDO:0009812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete osteomalacia, sclerosing, with cerebral calcification (obsolete MONDO:0009812)","termid":"MONDO:0009812","xrefs":{"Monarch":{"xref_id":"0009812"}}}


id: MONDO:1012127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease, non-human animal","termid":"MONDO:1011724"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunodeficiency disease, llama","secondary_identifiers":["OMIA:000550-9844"],"termid":"MONDO:1012127","xrefs":{"Monarch":{"xref_id":"1012127"}}}


id: MONDO:0009588
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Langer mesomelic dysplasia (LMD) is characterized by severe disproportionate short stature with mesomelic and rhizomelic shortening of the upper and lower limbs.","definition_xrefs":["Orphanet:2632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesomelic dysplasia","termid":"MONDO:0023599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Langer mesomelic dysplasia","secondary_identifiers":["GARD:3553","MESH:C537267","OMIM:249700","SCTID:38494008","MEDGEN:96585","ICD9:756.59","UMLS:C0432230","NCIT:C126876"],"synonyms":[{"name":"LMD","type":"related"},{"name":"Langer mesomelic dysplasia","type":"exact"},{"name":"Langer syndrome","type":"exact"},{"name":"Langer type mesomelic dysplasia","type":"exact"},{"name":"dyschondrosteosis, homozygous","type":"related"},{"name":"langer mesomelic dysplasia, pseudoautosomal recessive","type":"exact"},{"name":"mesomelic dwarfism of the hypoplastic ulna, fibula and mandible type","type":"related"},{"name":"mesomelic dwarfism of the hypoplastic ulna, fibula, and mandible type","type":"related"},{"name":"mesomelic dwarfism, Langer type","type":"exact"}],"termid":"MONDO:0009588","xrefs":{"Monarch":{"xref_id":"0009588"}}}


id: MONDO:0010764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nonsyndromic deafness, Y-linked","termid":"MONDO:0033304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497"],"is_obsolete":false,"name":"hearing loss, Y-linked 1","secondary_identifiers":["OMIM:400043","MEDGEN:854748","UMLS:C3888076","DOID:0111759"],"synonyms":[{"name":"DFNY1","type":"exact"},{"name":"deafness, Y-linked 1","type":"narrow"},{"name":"deafness, Y-linked 1, Y-linked","type":"narrow"}],"termid":"MONDO:0010764","xrefs":{"Monarch":{"xref_id":"0010764"}}}


id: GO:0031892
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2 vasoactive intestinal polypeptide receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasoactive intestinal polypeptide receptor binding","termid":"GO:0031890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"type 2 vasoactive intestinal polypeptide receptor binding","synonyms":[{"name":"type 2 vasoactive intestinal polypeptide receptor ligand","type":"narrow"},{"name":"type 3 PACAP receptor binding","type":"exact"}],"termid":"GO:0031892"}


id: MONDO:0013338
data:
  {"annotated_genes":["SJAG_04409","SJAG_00488"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88851,88852],"is_not":false,"summary":null,"term":"MONDO:0013338"}]},"cv_name":"mondo","definition":"Autosomal recessive intermediate Charcot-Marie-Tooth disease type B is an extremely rare subtype of autosomal recessive intermediate Charcot-Marie-Tooth (CMT) disease characterized by a CMT neuropathy associated with developmental delay, self-abusive behavior, dysmorphic features and vestibular Schwannoma. Motor nerve conduction velocities demonstrate features of both demyelinating and axonal pathology.","definition_xrefs":["Orphanet:254334"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive intermediate Charcot-Marie-Tooth disease","termid":"MONDO:0017058"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00488":null,"SJAG_04409":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease recessive intermediate B","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110204","GARD:12454","OMIM:613641","MEDGEN:462247","UMLS:C3150897"],"synonyms":[{"name":"CMTRIB","type":"exact"},{"name":"Charcot-Marie-Tooth disease caused by mutation in KARS","type":"exact"},{"name":"Charcot-Marie-Tooth disease recessive intermediate type B","type":"exact"},{"name":"Charcot-Marie-Tooth disease, recessive Intermediate type B","type":"exact"},{"name":"Charcot-Marie-Tooth disease, recessive intermediate B","type":"related"},{"name":"Charcot-Marie-Tooth disease, recessive intermediate, B","type":"related"},{"name":"Charcot-Marie-Tooth neuropathy recessive intermediate B","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, recessive Intermediate B","type":"related"},{"name":"KARS Charcot-Marie-Tooth disease","type":"exact"},{"name":"RI-CMT type B","type":"exact"},{"name":"RI-CMTB","type":"exact"},{"name":"autosomal recessive intermediate Charcot-Marie-Tooth disease type B","type":"exact"}],"termid":"MONDO:0013338","terms_by_termid":{"MONDO:0013338":null},"xrefs":{"Monarch":{"xref_id":"0013338"}}}


id: PBO:0073045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small cysteine and glycine repeat containing 3","termid":"PBO:0073045"}


id: GO:0070043
data:
  {"annotated_genes":["SJAG_02281"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96720],"is_not":false,"summary":null,"term":"GO:0070043"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing N7-methylguanine.","definition_xrefs":["GOC:imk","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"rRNA (guanine) methyltransferase activity","termid":"GO:0016435"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02281":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0140098","GO:0003674","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"rRNA (guanine-N7-)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6790982"],"termid":"GO:0070043","terms_by_termid":{"GO:0070043":null}}


id: PBO:0050640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor Y-linked 5, pseudogene","termid":"PBO:0050640"}


id: PBO:0060085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 32","termid":"PBO:0060085"}


id: MONDO:0024337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm involving a urothelium.","definition_xrefs":["MONDO:patterns/neoplasm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary system neoplasm","termid":"MONDO:0021066"},{"relation_name":"is_a","term_name":"transitional cell neoplasm","termid":"MONDO:0037254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urothelial neoplasm","secondary_identifiers":["NCIT:C39852","MEDGEN:275551","UMLS:C1519840"],"synonyms":[{"name":"neoplasm of urothelium","type":"exact"},{"name":"transitional cell neoplasm of the urinary tract","type":"exact"},{"name":"tumor of urothelium","type":"exact"},{"name":"tumour of urothelium","type":"exact"},{"name":"urothelial neoplasm","type":"exact"},{"name":"urothelium neoplasm","type":"exact"},{"name":"urothelium neoplasm (disease)","type":"exact"},{"name":"urothelium tumor","type":"exact"},{"name":"urothelium tumour","type":"exact"}],"termid":"MONDO:0024337","xrefs":{"Monarch":{"xref_id":"0024337"}}}


id: GO:0141081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or stops an inflammasome-mediated signal transduction pathway in the host organism by interfering with its normal execution. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:34324582","PMID:26687278","PMID:36227980","PMID:29061850","PMID:27214553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host inflammasome-mediated signal transduction","synonyms":[{"name":"perturbation of host inflammasome-mediated signal transduction","type":"broad"}],"termid":"GO:0141081"}


id: GO:1900018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any phosphorylation of RNA polymerase II C-terminal domain serine 5 residues that is involved in recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex.","definition_xrefs":["PMID:10594013","GOC:rb","PMID:19666497","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphorylation of RNA polymerase II C-terminal domain serine 5 residues involved in recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex (obsolete GO:1900018)","termid":"GO:1900018"}


id: PBO:0079587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 D3","termid":"PBO:0079587"}


id: PBO:0000815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol cholinephosphotranferase/ diacylglycerol ethanolaminesphotranferase (predicted)","termid":"PBO:0000815"}


id: PBO:0047175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 197 Y-linked member 8","termid":"PBO:0047175"}


id: PBO:0116316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase F(o) subunit J, Atp18","termid":"PBO:0116316"}


id: MONDO:0030525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex","termid":"MONDO:0017610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa simplex 2B, generalized intermediate","secondary_identifiers":["MEDGEN:1794219","OMIM:619588","UMLS:C5562009"],"synonyms":[{"name":"EBS2B","type":"exact"}],"termid":"MONDO:0030525","xrefs":{"Monarch":{"xref_id":"0030525"}}}


id: FYPO:0007454
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of ATP binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ATP binding","termid":"FYPO:0003671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased ATP binding","synonyms":[{"name":"reduced ATP binding","type":"exact"}],"termid":"FYPO:0007454"}


id: PBO:0064476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POLG divergent transcript","termid":"PBO:0064476"}


id: PR:Q09711
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A neuronal calcium sensor 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00114","PANTHER:PTHR23055:SF22","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium-binding protein NCS-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18B11.04","secondary_identifiers":["UniProtKB:Q09711"],"synonyms":[{"name":"Spom972h-NCS1","type":"exact"}],"termid":"PR:Q09711"}


id: FYPO:0004853
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype that affects the localization of an RNA in a cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization phenotype","termid":"FYPO:0000138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"RNA localization phenotype","synonyms":[{"name":"RNA localisation phenotype","type":"exact"},{"name":"fission yeast RNA localization phenotype","type":"exact"}],"termid":"FYPO:0004853"}


id: MONDO:0015332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare developmental defect with connective tissue involvement (obsolete MONDO:0015332)","secondary_identifiers":["Orphanet:139030"],"termid":"MONDO:0015332","xrefs":{"Monarch":{"xref_id":"0015332"}}}


id: PBO:0066624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIC8 guanine nucleotide exchange factor A","termid":"PBO:0066624"}


id: PBO:0081698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 620","termid":"PBO:0081698"}


id: GO:0009968
data:
  {"annotated_genes":["SJAG_03353","SJAG_02392","SJAG_01386","SJAG_02451","SJAG_02514","SJAG_03486","SJAG_00457","SJAG_00990","SJAG_00991","SJAG_02233","SJAG_02379","SJAG_03508","SJAG_04455","SJAG_00975","SJAG_04551","SJAG_01790","SJAG_01253","SJAG_03185","SJAG_00289","SJAG_03355","SJAG_02389","SJAG_01679","SJAG_01142","SJAG_02311","SJAG_03974","SJAG_04206","SJAG_03592","SJAG_01464","SJAG_04825","SJAG_02013","SJAG_04462","SJAG_00883","SJAG_03678","SJAG_00266","SJAG_01983","SJAG_01297","SJAG_02336","SJAG_03501","SJAG_00229","SJAG_01114","SJAG_04259","SJAG_00169","SJAG_02426","SJAG_02858","SJAG_00526","SJAG_04910","SJAG_04943","SJAG_02231","SJAG_02481","SJAG_01245","SJAG_03799","SJAG_01184","SJAG_03089","SJAG_00424","SJAG_04249","SJAG_02765","SJAG_03263","SJAG_06270","SJAG_03126","SJAG_03893","SJAG_02000","SJAG_00642","SJAG_00293","SJAG_04522","SJAG_03072","SJAG_00875","SJAG_02169","SJAG_05000","SJAG_00824","SJAG_00610","SJAG_05346","SJAG_00209","SJAG_03681"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115641,113813,109064,116129,117760,92534,101403,110092,105711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[94563,118239,109807,102257,93903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110034"},{"annotations":[102815,117987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106057"},{"annotations":[101252,108877,120194,105619,97666,109445],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"},{"annotations":[104664,103960,91251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902660"},{"annotations":[96009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[96850,97788,120195,93481,101254,118943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903753"},{"annotations":[90021,108970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180040"},{"annotations":[95134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090029"},{"annotations":[74066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046580"},{"annotations":[73283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035024"},{"annotations":[108932,112015,93549,117763,95269,109375,103090,92538,94741,106871,74647,109065,97453,94656,101405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"},{"annotations":[113565,93052,107724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000639"},{"annotations":[74910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032007"},{"annotations":[111519,75396,120098,81668,97915,111112,101387,104833,89836,62916,106961,95140,116435,115015,115833,118343,100690,118906,108982,75289,103274,117988,119905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904262"},{"annotations":[118134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903940"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of signal transduction.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"negative regulation of cell communication","termid":"GO:0010648"},{"relation_name":"is_a","term_name":"negative regulation of signaling","termid":"GO:0023057"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"negatively_regulates","term_name":"signal 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regulation of signal transduction","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0035467","Reactome:R-HSA-8849472"],"synonyms":[{"name":"down regulation of signal transduction","type":"exact"},{"name":"down-regulation of signal transduction","type":"exact"},{"name":"downregulation of signal transduction","type":"exact"},{"name":"inhibition of signal transduction","type":"narrow"},{"name":"negative regulation of signaling pathway","type":"related"},{"name":"negative regulation of signalling pathway","type":"related"}],"termid":"GO:0009968","terms_by_termid":{"GO:0031030":null,"GO:0032007":null,"GO:0035024":null,"GO:0046580":null,"GO:0090029":null,"GO:0106057":null,"GO:0110034":null,"GO:0140499":null,"GO:0180040":null,"GO:1902426":null,"GO:1902660":null,"GO:1903138":null,"GO:1903753":null,"GO:1903940":null,"GO:1904262":null,"GO:2000639":null}}


id: GO:0004205
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase-8 activity (obsolete GO:0004205)","synonyms":[{"name":"caspase-8 activity","type":"exact"}],"termid":"GO:0004205"}


id: GO:0070586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of one cell to another cell affecting gastrulation.","definition_xrefs":["PMID:19091770","GOC:dsf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion via plasma-membrane adhesion molecules","termid":"GO:0098742"},{"relation_name":"part_of","term_name":"gastrulation","termid":"GO:0007369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell-cell adhesion involved in gastrulation","termid":"GO:0070586"}


id: FYPO:0003837
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of RNA polymerase II carboxy-terminal domain kinase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein kinase activity","termid":"FYPO:0002700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"increased RNA polymerase II carboxy-terminal domain kinase activity","termid":"FYPO:0003837"}


id: PBO:0038377
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_treated_by_substance","termid":"PBO:0038377"}


id: FYPO:0006760
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which centromeres do not detach properly from the spindle pole body (SPB) during the meiotic cell cycle. Normally, centromeres are located at the SPB during mitotic interphase, and upon entering meiosis, telomeres cluster at the SPB, followed by centromere detachment from the SPB.","definition_xrefs":["PomBase:mah","PMID:27611693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic chromosome organization","termid":"FYPO:0006759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"abnormal centromere detachment from spindle pole body during meiotic chromosome organization","synonyms":[{"name":"abnormal centromere detachment from SPB during meiotic chromosome organization","type":"exact"},{"name":"abnormal centromere detachment from spindle pole body during meiotic chromosome organisation","type":"exact"},{"name":"abnormal centromere detachment from spindle pole body involved in chromosome organization involved in meiotic cell cycle","type":"exact"},{"name":"abnormal centromere detachment from spindle pole body involved in meiotic chromosome organization","type":"exact"},{"name":"defective centromere detachment from the SPB during karyogamy and meiotic prophase","type":"exact"}],"termid":"FYPO:0006760"}


id: PBO:0061180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (TTG) 10-1","termid":"PBO:0061180"}


id: MOD:01742
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Proteome Sciences TMT6plex-128 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-128 reporter+balance reagent acylated residue","termid":"MOD:01736"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-128 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01742"}


id: PBO:0079883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroplakin 3B","termid":"PBO:0079883"}


id: MONDO:0018066
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trisomy X is a sex chromosome anomaly with a variable phenotype caused by the presence of an extra X chromosome in females (47,XXX instead of 46,XX).","definition_xrefs":["Orphanet:3375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"},{"relation_name":"is_a","term_name":"chromosome X disorder","termid":"MONDO:0700027"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"trisomy X","secondary_identifiers":["MESH:C535318","NCIT:C129718","GARD:5672","SCTID:35111009","MEDGEN:113140","icd11.foundation:423644907","UMLS:C0221033","NORD:1798"],"synonyms":[{"name":"47 XXX syndrome","type":"related"},{"name":"47,XXX","type":"exact"},{"name":"47,XXX syndrome","type":"exact"},{"name":"Triplo X syndrome","type":"related"},{"name":"Triplo-X syndrome","type":"exact"},{"name":"XXX syndrome","type":"exact"},{"name":"triple X syndrome","type":"exact"},{"name":"triple-X chromosome syndrome","type":"related"},{"name":"triple-X female","type":"related"},{"name":"trisomy X","type":"exact"},{"name":"trisomy type X","type":"exact"}],"termid":"MONDO:0018066","xrefs":{"Monarch":{"xref_id":"0018066"}}}


id: PBO:0065681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-tRNA hydrolase domain containing 1","termid":"PBO:0065681"}


id: MONDO:0010014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Craniometadiaphyseal dysplasia, wormian bone type is an extremely rare craniotubular bone dysplasia syndrome described in fewer than 10 patients to date. Clinical manifestations include macrocephaly, frontal bossing, malar hypoplasia, prominent mandible and dental hypoplasia. Other skeletal anomalies include abnormal bone modeling in tubular bones, multiple wormian bones and deformities of chest, pelvis and elbows. An increased risk of fractures is noted.","definition_xrefs":["Orphanet:85184"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniometadiaphyseal dysplasia, wormian bone type","secondary_identifiers":["SCTID:278833002","MEDGEN:1382152","icd11.foundation:1055011248","OMIM:269300","UMLS:C4510809","GARD:16737"],"synonyms":[{"name":"CRANIOMETADIAPHYSEAL dysplasia","type":"related"},{"name":"CRMDD","type":"related"},{"name":"Schwartz-Lelek syndrome","type":"exact"}],"termid":"MONDO:0010014","xrefs":{"Monarch":{"xref_id":"0010014"}}}


id: MONDO:0044924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute myeloid leukemia with mutated CEBPA (obsolete MONDO:0044924)","termid":"MONDO:0044924","xrefs":{"Monarch":{"xref_id":"0044924"}}}


id: GO:1904730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intestinal lipid absorption.","definition_xrefs":["GO_REF:0000058","PMID:18768481","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intestinal absorption","termid":"GO:1904479"},{"relation_name":"is_a","term_name":"regulation of intestinal lipid absorption","termid":"GO:1904729"},{"relation_name":"negatively_regulates","term_name":"intestinal lipid absorption","termid":"GO:0098856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of intestinal lipid absorption","synonyms":[{"name":"down regulation of intestinal lipid absorption","type":"exact"},{"name":"down-regulation of intestinal lipid absorption","type":"exact"},{"name":"downregulation of intestinal lipid absorption","type":"exact"},{"name":"inhibition of intestinal lipid absorption","type":"narrow"}],"termid":"GO:1904730"}


id: MONDO:0017459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete central polydactyly of toes (obsolete MONDO:0017459)","secondary_identifiers":["SCTID:253967005","Orphanet:295010"],"synonyms":[{"name":"central polydactyly of foot","type":"exact"},{"name":"mesoaxial polydactyly of toes","type":"exact"},{"name":"mirror foot","type":"exact"}],"termid":"MONDO:0017459","xrefs":{"Monarch":{"xref_id":"0017459"}}}


id: PBO:0060900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuralized E3 ubiquitin protein ligase 3","termid":"PBO:0060900"}


id: PBO:0062787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ORC1 pseudogene 1","termid":"PBO:0062787"}


id: PBO:0030591
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_vacuolar_lysine_level","termid":"PBO:0030591"}


id: FYPO:0000491
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial genome maintenance does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial genome maintenance","termid":"FYPO:0000490"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished mitochondrial genome maintenance","synonyms":[{"name":"abolished mitochondrial genome maintenance during mitotic cell cycle","type":"related"},{"name":"absent mitochondrial genome maintenance","type":"exact"},{"name":"mitochondrial genome maintenance abolished","type":"exact"},{"name":"mitochondrial genome maintenance abolished during vegetative growth","type":"exact"},{"name":"mitochondrial genome maintenance: absent","type":"related"}],"termid":"FYPO:0000491"}


id: PBO:0065407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha 6 pseudogene 3","termid":"PBO:0065407"}


id: PBO:0067904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 206","termid":"PBO:0067904"}


id: MONDO:0017219
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microform holoprosencephaly is a benign form of holoprosencephaly (HPE) characterized by midline defects without the typical HPE defect in brain cleavage.","definition_xrefs":["Orphanet:280200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"holoprosencephaly","termid":"MONDO:0016296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"microform holoprosencephaly","secondary_identifiers":["ICD10CM:Q04.2","GARD:17290","UMLS:C5393309","icd11.foundation:44293173","DOID:0111380","MEDGEN:1711978"],"synonyms":[{"name":"HPE, minor form","type":"exact"},{"name":"HPE-L","type":"exact"},{"name":"HoloprosencC)phalie, minor form","type":"exact"},{"name":"Holoprosencéphalie, minor form","type":"exact"},{"name":"Microform HPE","type":"exact"},{"name":"holoprosencephaly-like","type":"exact"}],"termid":"MONDO:0017219","xrefs":{"Monarch":{"xref_id":"0017219"}}}


id: GO:0022889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of serine from one side of a membrane to the other. Serine is 2-amino-3-hydroxypropanoic acid.","definition_xrefs":["GOC:mtg_transport","RHEA:35031","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete serine transmembrane transporter activity (obsolete GO:0022889)","termid":"GO:0022889"}


id: PBO:0002923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2AF small subunit, U2AF-23","termid":"PBO:0002923"}


id: MONDO:0042977
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial multiple trichoepithelioma","termid":"MONDO:0011114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"trichoepithelioma, multiple familial, 1","secondary_identifiers":["GARD:5262","OMIM:601606"],"synonyms":[{"name":"Brooke-Fordyce Trichoepitheliomas","type":"related"},{"name":"MFT1","type":"related"},{"name":"epithelioma adenoides cysticum of Brooke","type":"related"},{"name":"epithelioma, hereditary multiple benign cystic","type":"related"},{"name":"multiple familial trichoepithelioma 1","type":"related"},{"name":"trichoepithelioma multiple familial 1","type":"related"},{"name":"trichoepithelioma, multiple familial, 1","type":"exact"}],"termid":"MONDO:0042977","xrefs":{"Monarch":{"xref_id":"0042977"}}}


id: PBO:0090972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Srp1 family splicing factor","termid":"PBO:0090972"}


id: GO:0072097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor resulting in the reduction of the frequency, rate or extent of branch elongation involved in ureteric bud branching, the growth of a branch of the ureteric bud along its axis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of branch elongation involved in ureteric bud branching by BMP signaling pathway (obsolete GO:0072097)","synonyms":[{"name":"negative regulation of branch elongation involved in ureteric bud branching by BMP signalling pathway","type":"exact"}],"termid":"GO:0072097"}


id: PBO:0088448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsp40 family ER-associated DNAJ domain protein Scj1","termid":"PBO:0088448"}


id: PBO:0061774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OBSCN antisense RNA 1","termid":"PBO:0061774"}


id: PBO:0057428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 550a-1","termid":"PBO:0057428"}


id: MONDO:0013114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant nonsyndromic deafness that is characterized postlingual onset in the second decade of life with flat progressive hearing loss and has material basis in mutation in the MIRN96 gene on chromosome 7q32.","definition_xrefs":["DOID:0110576","PMID:19363479"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 50","secondary_identifiers":["OMIM:613074","MEDGEN:854780","GARD:18132","UMLS:C3888123"],"synonyms":[{"name":"DFNA50","type":"narrow"},{"name":"autosomal dominant deafness 50","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 50","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 50","type":"narrow"},{"name":"deafness, autosomal dominant 50","type":"related"},{"name":"deafness, autosomal dominant type 50","type":"narrow"}],"termid":"MONDO:0013114","xrefs":{"Monarch":{"xref_id":"0013114"}}}


id: PBO:0049959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A pseudogene 5","termid":"PBO:0049959"}


id: GO:0009606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of an organism, or part of an organism, in response to an external source of stimulus, usually toward or away from it.","definition_xrefs":["GOC:curators","ISBN:0877795088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external stimulus","termid":"GO:0009605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tropism","secondary_identifiers":["Wikipedia:Tropism"],"termid":"GO:0009606"}


id: GO:0008418
data:
  {"annotated_genes":["SJAG_00476","SJAG_00450"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68955,80664],"is_not":false,"summary":null,"term":"GO:0008418"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N-terminal L-asparaginyl-[protein] + H+ + H2O = N-terminal L-aspartyl-[protein] + NH4+. This reaction is the deamidation of an N-terminal asparagine residue in a peptide or protein.","definition_xrefs":["PMID:8910481","RHEA:50676"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein asparagine deamidase activity","termid":"GO:0160260"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00450":null,"SJAG_00476":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0140096","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"protein-N-terminal asparagine amidohydrolase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["EC:3.5.1.121"],"termid":"GO:0008418","terms_by_termid":{"GO:0008418":null}}


id: PBO:0017920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3H and G-patch domain Sqs1(predicted)","termid":"PBO:0017920"}


id: GO:0071660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of IP-10.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"is_a","term_name":"regulation of IP-10 production","termid":"GO:0071658"},{"relation_name":"positively_regulates","term_name":"IP-10 production","termid":"GO:0071612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of IP-10 production","synonyms":[{"name":"positive regulation of CXCL10 production","type":"exact"},{"name":"positive regulation of chemokine (C-C motif) ligand 10 production","type":"exact"}],"termid":"GO:0071660"}


id: GO:0055117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac muscle contraction.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of striated muscle contraction","termid":"GO:0006942"},{"relation_name":"is_a","term_name":"regulation of heart contraction","termid":"GO:0008016"},{"relation_name":"regulates","term_name":"cardiac muscle contraction","termid":"GO:0060048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle contraction","termid":"GO:0055117"}


id: GO:1904107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a microvillus membrane.","definition_xrefs":["GO_REF:0000087","GOC:kmv","PMID:25335890","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"},{"relation_name":"is_a","term_name":"protein localization to microvillus","termid":"GO:1904106"},{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to microvillus membrane","synonyms":[{"name":"protein localisation in microvillus membrane","type":"exact"},{"name":"protein localisation to microvillus membrane","type":"exact"},{"name":"protein localization in microvillus membrane","type":"exact"}],"termid":"GO:1904107"}


id: GO:0047107
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-guanidinobutanal + H2O + NAD+ = 4-guanidinobutanoate + 2 H+ + NADH.","definition_xrefs":["RHEA:14381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"gamma-guanidinobutyraldehyde dehydrogenase (NAD+) activity","secondary_identifiers":["KEGG_REACTION:R03177","MetaCyc:1.2.1.54-RXN","EC:1.2.1.54"],"synonyms":[{"name":"4-guanidinobutanal:NAD+ 1-oxidoreductase activity","type":"related"},{"name":"4-guanidinobutyraldehyde dehydrogenase activity","type":"related"},{"name":"GBAL dehydrogenase activity","type":"related"},{"name":"alpha-guanidinobutyraldehyde dehydrogenase activity","type":"related"}],"termid":"GO:0047107"}


id: MONDO:0010788
data:
  {"annotated_genes":["SJAG_MIT13","SJAG_MIT03","SJAG_MIT15"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87329,87330,87331],"is_not":false,"summary":null,"term":"MONDO:0010788"}]},"cv_name":"mondo","definition":"Leber's hereditary optic neuropathy (LHON) is a mitochondrial neurodegenerative disease affecting the optic nerve and often characterized by sudden vision loss in young adult carriers.","definition_xrefs":["Orphanet:104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"},{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"hereditary optic neuropathy","termid":"MONDO:0020249"},{"relation_name":"is_a","term_name":"hereditary optic atrophy","termid":"MONDO:0043878"}],"gene_count":3,"genes_by_uniquename":{"SJAG_MIT03":null,"SJAG_MIT13":null,"SJAG_MIT15":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005328","MONDO:0005559","MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"Leber hereditary optic neuropathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:182973","NCIT:C84808","icd11.foundation:1018428959","OMIM:535000","MESH:D029242","DOID:705","NANDO:1200178","SCTID:58610003","NANDO:1200940","NORD:1352","UMLS:C0917796","GARD:6870"],"synonyms":[{"name":"LHON","type":"exact"},{"name":"Leber Hereditary optic atrophy","type":"exact"},{"name":"Leber hereditary optic neuropathy","type":"exact"},{"name":"Leber optic atrophy","type":"exact"},{"name":"Leber's hereditary optic neuropathy","type":"exact"},{"name":"Leber's optic atrophy","type":"exact"},{"name":"Leber’s disease","type":"related"},{"name":"optic atrophy, Leber type","type":"related"}],"termid":"MONDO:0010788","terms_by_termid":{"MONDO:0010788":null},"xrefs":{"Monarch":{"xref_id":"0010788"}}}


id: PBO:0047060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 120A2, pseudogene","termid":"PBO:0047060"}


id: PBO:0088283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase delta subunit","termid":"PBO:0088283"}


id: GO:0000366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining together of two independently transcribed RNAs from two different genes, each of which also produces mRNA(s) via cis-splicing.","definition_xrefs":["PMID:11726664","PMID:12110900","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA trans splicing, via spliceosome","termid":"GO:0000365"},{"relation_name":"is_a","term_name":"alternative mRNA splicing, via spliceosome","termid":"GO:0000380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"mRNA alternative trans-splicing","synonyms":[{"name":"intergenic mRNA trans splicing","type":"exact"},{"name":"intergenic nuclear mRNA trans splicing","type":"exact"}],"termid":"GO:0000366"}


id: PR:P40901
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An asc-type amino acid transporter 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02267","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sexual differentiation process putative amino-acid permease isp5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1039.09","secondary_identifiers":["UniProtKB:P40901"],"synonyms":[{"name":"Spom972h-SLC7A10","type":"exact"}],"termid":"PR:P40901"}


id: FYPO:0004609
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain more spindle pole bodies (SPBs) than normal during one or both meiotic nuclear divisions. In this phenotype, extra SPBs typically contain normal components but seldom attach to spindle microtubules.","definition_xrefs":["PomBase:mah","PMID:15569158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"},{"relation_name":"output_of","term_name":"increased meiotic spindle pole body duplication","termid":"FYPO:0007259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"spindle pole bodies present in increased numbers during meiosis","synonyms":[{"name":"SPBs present in increased numbers during meiosis","type":"exact"},{"name":"excess meiotic spindle pole bodies present","type":"exact"},{"name":"excess spindle pole bodies present during meiosis","type":"exact"},{"name":"extra spindle pole bodies present during meiosis","type":"exact"},{"name":"pseudo-SPBs present during meiosis","type":"exact"},{"name":"spindle pole bodies present in greater numbers during meiosis","type":"exact"},{"name":"spindle pole bodies present in increased numbers during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0004609"}


id: PBO:0060574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 10","termid":"PBO:0060574"}


id: GO:0099703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The induction of synaptic vesicle release by any process that leads to a rise in intracellular calcium ion concentration at the presynapse. This is the first step in synaptic transmission.","definition_xrefs":["GOC:dos","ISBN:9780071120005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"presynaptic modulation of chemical synaptic transmission","termid":"GO:0099171"},{"relation_name":"is_a","term_name":"positive regulation of presynaptic cytosolic calcium concentration","termid":"GO:0099533"},{"relation_name":"is_a","term_name":"positive regulation of synaptic vesicle exocytosis","termid":"GO:2000302"},{"relation_name":"part_of","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"induction of synaptic vesicle exocytosis by positive regulation of presynaptic cytosolic calcium ion concentration","termid":"GO:0099703"}


id: PBO:0065851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11 family interacting protein 2","termid":"PBO:0065851"}


id: PBO:0003419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribose diphosphatase, NudF subfamily (predicted)","termid":"PBO:0003419"}


id: PBO:0030154
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleus_during_vegetative_growth","termid":"PBO:0030154"}


id: PBO:0061116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family pyrin domain containing 7","termid":"PBO:0061116"}


id: SO:0001850
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element that consists of at least three copies of the pentanucleotide NGAAN, bound by the heat shock transcription factor HSF.","definition_xrefs":["PMID:8689565","PMID:17347150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSE","synonyms":[{"name":"heat shock element","type":"exact"}],"termid":"SO:0001850"}


id: GO:0044428
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the nucleus, a membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear part (obsolete GO:0044428)","synonyms":[{"name":"nuclear subcomponent","type":"exact"},{"name":"nucleus component","type":"exact"}],"termid":"GO:0044428"}


id: MONDO:0012821
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"colorectal cancer","termid":"MONDO:0005575"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal cancer, susceptibility to, 5","secondary_identifiers":["UMLS:C2677122","OMIM:612230","MEDGEN:393664"],"synonyms":[{"name":"CRCS5","type":"exact"},{"name":"colorectal cancer, susceptibility to, 5","type":"exact"},{"name":"colorectal cancer, susceptibility to, on chromosome 10","type":"related"}],"termid":"MONDO:0012821","xrefs":{"Monarch":{"xref_id":"0012821"}}}


id: MONDO:0009224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fetal iodine syndrome refers to symptoms and signs that may be observed in a fetus or newborn when the mother was exposed during pregnancy to inappropriate (insufficient or excessive) amounts of iodine. Iodine deficiency is associated with goiter and hypothyroidism. When severe iodine deficiency occurs during pregnancy, it is associated with congenital hypothyroidism that is manifested by increased neonatal morbi-mortality and severe mental dysfunction, hyperactivity, attention disorders and a substantial decrease of IQ of an irreversible nature. Excessive iodine ingestion during the third trimester of pregnancy can result in hypothyroidism and fetal goiter due to a prolonged inhibition of thyroid hormone synthesis, an increase in thyrotropin (TSH).","definition_xrefs":["Orphanet:1910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transient congenital hypothyroidism due to maternal factor","termid":"MONDO:0016555"},{"relation_name":"is_a","term_name":"toxic or drug-related embryofetopathy","termid":"MONDO:0016677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fetal iodine syndrome","secondary_identifiers":["GARD:2304","MEDGEN:907922","OMIM:228355","UMLS:C4273860","SCTID:718228001"],"synonyms":[{"name":"FIDD","type":"related"},{"name":"endemic cretinism","type":"related"},{"name":"fetal iodine deficiency disorder","type":"related"},{"name":"foetal iodine deficiency disorder","type":"related"}],"termid":"MONDO:0009224","xrefs":{"Monarch":{"xref_id":"0009224"}}}


id: PBO:0060821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NECAP endocytosis associated 1 pseudogene 2","termid":"PBO:0060821"}


id: PBO:0071817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 12","termid":"PBO:0071817"}


id: GO:0052748
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: baicalin + H2O = baicalein + D-glucuronate.","definition_xrefs":["RHEA:28130","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"baicalin beta-D-glucuronidase activity","secondary_identifiers":["EC:3.2.1.167","MetaCyc:RXN-11760","KEGG_REACTION:R09533"],"synonyms":[{"name":"5,6,7-trihydroxyflavone-7-O-beta-D-glucupyranosiduronate glucuronosylhydrolase activity","type":"related"},{"name":"baicalinase activity","type":"broad"}],"termid":"GO:0052748"}


id: PBO:0111485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II CTD S5 small phosphatase Psr1","termid":"PBO:0111485"}


id: SO:0001314
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"1,2'-O-dimethyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"one_two_prime_O_dimethyladenosine","secondary_identifiers":["RNAMOD:097"],"synonyms":[{"name":"1,2'-O-dimethyladenosine","type":"exact"},{"name":"m1Am","type":"exact"},{"name":"one two prime O dimethyladenosine","type":"exact"}],"termid":"SO:0001314"}


id: FYPO:0003894
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to rotenone. Cells stop growing (and may die) at a concentration of rotenone that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002683","FYPO:0000139","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to rotenone","synonyms":[{"name":"hypersensitive to rotenone","type":"exact"},{"name":"sensitive to rotenone during mitotic cell cycle","type":"related"},{"name":"sensitive to rotenone during vegetative growth","type":"exact"}],"termid":"FYPO:0003894"}


id: GO:1905677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of adaptive immune effector response.","definition_xrefs":["GO_REF:0000058","ISBN:9781405196833","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of adaptive immune response","termid":"GO:0002819"},{"relation_name":"regulates","term_name":"adaptive immune effector response","termid":"GO:0090718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of adaptive immune effector response","termid":"GO:1905677"}


id: PBO:0064953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 5","termid":"PBO:0064953"}


id: MONDO:0021447
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the testis.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign male reproductive system neoplasm","termid":"MONDO:0000625"},{"relation_name":"is_a","term_name":"neoplasm of testis","termid":"MONDO:0021348"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of testis","secondary_identifiers":["MEDGEN:57576","icd11.foundation:815021426","ICD10CM:D29.2","ICD9:222.0","UMLS:C0154007","SCTID:92428008","NCIT:C3612"],"synonyms":[{"name":"benign neoplasm of the testis","type":"exact"},{"name":"benign testicular neoplasm","type":"exact"},{"name":"benign testicular tumor","type":"exact"},{"name":"benign testicular tumour","type":"exact"},{"name":"benign tumor of testis","type":"exact"},{"name":"benign tumor of the testis","type":"exact"},{"name":"benign tumour of testis","type":"exact"},{"name":"benign tumour of the testis","type":"exact"},{"name":"testis benign neoplasm","type":"exact"}],"termid":"MONDO:0021447","xrefs":{"Monarch":{"xref_id":"0021447"}}}


id: GO:0035505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of myosin light chain kinase activity.","definition_xrefs":["GOC:bf","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of myosin light chain kinase activity (obsolete GO:0035505)","termid":"GO:0035505"}


id: PBO:0025479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitric oxide dioxygenase Yhb1","termid":"PBO:0025479"}


id: PBO:0035892
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_neddylation","termid":"PBO:0035892"}


id: GO:0008964
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphate + oxaloacetate = phosphoenolpyruvate + HCO3-.","definition_xrefs":["EC:4.1.1.31"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoenolpyruvate carboxykinase activity","termid":"GO:0004611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phosphoenolpyruvate carboxylase activity","secondary_identifiers":["RHEA:28370","KEGG_REACTION:R00345","MetaCyc:PEPCARBOX-RXN"],"synonyms":[{"name":"PEP carboxylase activity","type":"related"},{"name":"PEPC","type":"related"},{"name":"PEPCase activity","type":"related"},{"name":"phosphate:oxaloacetate carboxy-lyase (adding phosphate; phosphoenolpyruvate-forming)","type":"related"},{"name":"phosphate:oxaloacetate carboxy-lyase (phosphorylating)","type":"related"},{"name":"phosphoenolpyruvic carboxylase activity","type":"related"},{"name":"phosphopyruvate (phosphate) carboxylase activity","type":"related"}],"termid":"GO:0008964"}


id: PBO:0041951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chibby family member 2","termid":"PBO:0041951"}


id: MONDO:0700303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A palsy characterized by a paralysis of the arm caused by an injury to the upper group of the main nerves supplying it, specifically the upper trunk C5-C6 of the brachial plexus. Erb palsy most commonly, though not exclusively, arises as a result of an injury sustained during birth.","definition_xrefs":["PMID:30020632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brachial plexus neuropathy from injury","termid":"MONDO:0004569"},{"relation_name":"is_a","term_name":"palsy","termid":"MONDO:0006496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Erb palsy","synonyms":[{"name":"Erb-Duchenne paralysis","type":"exact"}],"termid":"MONDO:0700303","xrefs":{"Monarch":{"xref_id":"0700303"}}}


id: MONDO:0015826
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant spondylocostal dysostosis is a very rare and mild form of spondylocostal dysostosis characterized by vertebral and costal segmentation defects, often with a reduction in the number of ribs.","definition_xrefs":["Orphanet:1797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondylocostal dysostosis","termid":"MONDO:0000359"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005497"],"is_obsolete":false,"name":"autosomal dominant spondylocostal dysostosis","secondary_identifiers":["GARD:12806","MEDGEN:902919","SCTID:716232002","UMLS:C4274761"],"synonyms":[{"name":"autosomal dominant spondylocostal dysplasia","type":"exact"},{"name":"spondylocostal dysostosis, autosomal dominant","type":"exact"}],"termid":"MONDO:0015826","xrefs":{"Monarch":{"xref_id":"0015826"}}}


id: GO:0060907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of macrophage cytokine production. Macrophage cytokine production is the appearance of a chemokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macrophage cytokine production","termid":"GO:0010935"},{"relation_name":"is_a","term_name":"positive regulation of myeloid leukocyte cytokine production involved in immune response","termid":"GO:0061081"},{"relation_name":"positively_regulates","term_name":"macrophage cytokine production","termid":"GO:0010934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage cytokine production","termid":"GO:0060907"}


id: PBO:0029913
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_lanosterol_level","termid":"PBO:0029913"}


id: GO:2000320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of T-helper 17 cell differentiation.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T-helper cell differentiation","termid":"GO:0045623"},{"relation_name":"is_a","term_name":"negative regulation of T-helper 17 type immune response","termid":"GO:2000317"},{"relation_name":"is_a","term_name":"regulation of T-helper 17 cell differentiation","termid":"GO:2000319"},{"relation_name":"negatively_regulates","term_name":"T-helper 17 cell differentiation","termid":"GO:0072539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of T-helper 17 cell differentiation","synonyms":[{"name":"negative regulation of T-helper 17 cell development","type":"related"}],"termid":"GO:2000320"}


id: PBO:0025518
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana cak1At","termid":"PBO:0025518"}


id: MONDO:0010091
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Crisponi syndrome (CS) is a severe disorder characterized by muscular contractions at birth, intermittent hyperthermia, facial abnormalities and camptodactyly.","definition_xrefs":["Orphanet:1545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cold-induced sweating syndrome","termid":"MONDO:0015526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Cold-induced sweating syndrome 1","secondary_identifiers":["DOID:0080329","MEDGEN:338577","OMIM:272430","UMLS:C1848947","SCTID:725097006","GARD:1611","MESH:C536214","OMIM:601378"],"synonyms":[{"name":"CISS1","type":"related"},{"name":"CRISPONI/cold-induced sweating syndrome 1","type":"related"},{"name":"Crisponi syndrome","type":"exact"},{"name":"Crisponi/cold-induced sweating syndrome 1","type":"related"},{"name":"Sohar-Crisponi syndrome","type":"related"},{"name":"cold-induced sweating syndrome 1","type":"related"},{"name":"cold-induced sweating syndrome type 1","type":"exact"},{"name":"muscle contractions, Tetanoform, with characteristic face, camptodactyly, hyperthermia, and sudden death","type":"related"}],"termid":"MONDO:0010091","xrefs":{"Monarch":{"xref_id":"0010091"}}}


id: PBO:0081736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF667 antisense RNA 1 (head to head)","termid":"PBO:0081736"}


id: PBO:0114134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfite transmembrane transporter Ssu1","termid":"PBO:0114134"}


id: GO:0009675
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sulfate(out) + H+(out) = sulfate(in) + H+(in). In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfate:proton symporter activity","termid":"GO:0008512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"high-affinity sulfate:proton symporter activity","synonyms":[{"name":"high affinity sulfate:hydrogen symporter activity","type":"exact"},{"name":"high affinity sulfate:proton symporter activity","type":"exact"},{"name":"high affinity sulphate:hydrogen symporter activity","type":"exact"}],"termid":"GO:0009675"}


id: PATO:0001593
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature which is relatively low.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased curvature","termid":"PATO:0001593"}


id: GO:0006180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that generates deoxyguanosine from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyguanosine biosynthetic process","termid":"GO:0042452"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside salvage","termid":"GO:0043098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"deoxyguanosine salvage","termid":"GO:0006180"}


id: MONDO:0019376
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute arboviral infection caused by a virus of the Flaviviridae family transmitted by an infected mosquito, that is asymptomatic in the majority of cases but that can present in rare occasions with mild flulike symptoms such as low-grade fever, arthralgia, myalgia, and/or rash, or with neurologic manifestations including meningitis, encephalitis with mental confusion or disorientation, tremors and acute flaccid paralysis/poliomyelitis.","definition_xrefs":["Orphanet:83476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"West Nile fever","termid":"MONDO:0002282"},{"relation_name":"is_a","term_name":"mosquito-borne viral encephalitis","termid":"MONDO:0020601"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"West-Nile encephalitis","secondary_identifiers":["NORD:1847","DOID:2365","MEDGEN:155889","EFO:0007545","MESH:D014901","SCTID:392662004","ICD9:066.41","GARD:9959","UMLS:C0751583","ICD10CM:A92.31"],"synonyms":[{"name":"West Nile Encephalitis","type":"exact"},{"name":"West Nile encephalitis","type":"exact"},{"name":"West Nile fever encephalitis","type":"exact"},{"name":"West Nile fever with encephalitis","type":"exact"},{"name":"West Nile virus caused infectious encephalitis","type":"exact"},{"name":"West Nile virus infectious encephalitis","type":"exact"},{"name":"West-Nile fever","type":"exact"}],"termid":"MONDO:0019376","xrefs":{"Monarch":{"xref_id":"0019376"}}}


id: PBO:0017027
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by rat Mark1","termid":"PBO:0017027"}


id: PBO:0053273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin like receptor A6","termid":"PBO:0053273"}


id: MONDO:0011557
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"radiation sensitivity/chromosome instability syndrome, autosomal dominant","secondary_identifiers":["MESH:C565326","MEDGEN:343082","UMLS:C1854244","OMIM:605463"],"synonyms":[{"name":"radiation sensitivity/chromosome instability syndrome, autosomal dominant","type":"exact"}],"termid":"MONDO:0011557","xrefs":{"Monarch":{"xref_id":"0011557"}}}


id: PBO:0002781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific cysteine protease, OTU family, Otu2","termid":"PBO:0002781"}


id: PBO:0057870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3179-3","termid":"PBO:0057870"}


id: PBO:0083732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential beta-coat protein of the COPI coatomer; involved in ER-to-Golgi protein trafficking and maintenance of normal ER morphology; shares 43% sequence identity with mammalian beta-coat protein (beta-COP)","termid":"PBO:0083732"}


id: PBO:0038963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenomedullin 2","termid":"PBO:0038963"}


id: FYPO:0004504
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which proteasome localization is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal proteasome localization","synonyms":[{"name":"normal proteasome localisation","type":"exact"},{"name":"normal proteasome localization during mitotic cell cycle","type":"related"},{"name":"normal proteasome localization during vegetative growth","type":"exact"},{"name":"normal proteasome location","type":"related"}],"termid":"FYPO:0004504"}


id: GO:0044043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving glucans, polysaccharides consisting only of glucose residues, involving more than one organism.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism glucan metabolic process (obsolete GO:0044043)","synonyms":[{"name":"multi-organism glucan metabolism","type":"exact"}],"termid":"GO:0044043"}


id: GO:0097433
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron dense body which may contain granules.","definition_xrefs":["NIF_Subcellular:sao730872736","ISBN:0195065719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"dense body","termid":"GO:0097433"}


id: PBO:0038545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 16B","termid":"PBO:0038545"}


id: PBO:0031865
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-develops_from","termid":"PBO:0031865"}


id: PBO:0057878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3182","termid":"PBO:0057878"}


id: PBO:0002522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATRIP, ATR checkpoint kinase regulatory subunit Rad26","termid":"PBO:0002522"}


id: PBO:0054073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1423","termid":"PBO:0054073"}


id: GO:0045045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The pathway along which proteins and other substances are moved around and out of the cell. After synthesis on the ribosomes of the endoplasmic reticulum (ER), completed polypeptide chains are moved to the Golgi complex and subsequently sorted to various destinations. Proteins synthesized and sorted in the secretory pathway include not only those that are secreted from the cell but also enzymes and other resident proteins in the lumen of the ER, Golgi, and lysosomes as well as integral proteins in the membranes of these organelles and the plasma membrane.","definition_xrefs":["ISBN:0716731363"],"gene_count":0,"genotype_count":0,"name":"obsolete secretory pathway (obsolete GO:0045045)","synonyms":[{"name":"secretory pathway","type":"exact"}],"termid":"GO:0045045"}


id: PBO:0055670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lines homolog 1","termid":"PBO:0055670"}


id: PBO:0068629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 9, pseudogene","termid":"PBO:0068629"}


id: FYPO:0000538
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein secretion is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein secretion during vegetative growth","termid":"FYPO:0000536"},{"relation_name":"is_a","term_name":"decreased protein transport during vegetative growth","termid":"FYPO:0000541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein secretion during vegetative growth","synonyms":[{"name":"decreased protein secretion during mitotic cell cycle","type":"related"},{"name":"protein secretion: decreased","type":"related"},{"name":"reduced protein secretion during vegetative growth","type":"exact"}],"termid":"FYPO:0000538"}


id: SO:0000440
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A replicon that has been modified to act as a vector for foreign sequence.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replicon","termid":"SO:0001235"},{"relation_name":"part_of","term_name":"clone","termid":"SO:0000151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vector_replicon","secondary_identifiers":["http://en.wikipedia.org/wiki/Vector_(molecular_biology)"],"synonyms":[{"name":"vector","type":"exact"},{"name":"vector replicon","type":"exact"}],"termid":"SO:0000440"}


id: PBO:0055874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRRC3 divergent transcript","termid":"PBO:0055874"}


id: PBO:0028462
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_lemon-shaped_cell","termid":"PBO:0028462"}


id: PBO:0048136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMR1 autosomal homolog 2","termid":"PBO:0048136"}


id: MONDO:0010042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic diplegia and intellectual disability","secondary_identifiers":["UMLS:C1849139","MEDGEN:376526","OMIM:270600","MESH:C537481"],"synonyms":[{"name":"hereditary spastic diplegia with intellectual disability","type":"related"},{"name":"hereditary spastic diplegia with mental retardation","type":"related"},{"name":"spastic diplegia and intellectual disability","type":"exact"},{"name":"spastic diplegia and mental retardation","type":"exact"},{"name":"spastic diplegia infantile type","type":"related"},{"name":"spastic diplegia, infantile type","type":"related"}],"termid":"MONDO:0010042","xrefs":{"Monarch":{"xref_id":"0010042"}}}


id: GO:0060685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of prostatic bud formation, the morphogenetic process in which a region of the fetal urogenital sinus epithelium is specified to become the prostate, resulting in prostate bud outgrowth.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of animal organ formation","termid":"GO:0003156"},{"relation_name":"is_a","term_name":"regulation of morphogenesis of a branching structure","termid":"GO:0060688"},{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"prostatic bud formation","termid":"GO:0060513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of prostatic bud formation","termid":"GO:0060685"}


id: FYPO:0004134
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to diethyl maleate is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"decreased RNA level during cellular response to diethyl maleate","synonyms":[{"name":"decreased RNA accumulation during cellular response to diethyl maleate","type":"related"},{"name":"decreased RNA level during cellular response to DEM","type":"exact"},{"name":"decreased RNA level during cellular response to diethyl maleate during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to diethyl maleate during vegetative growth","type":"exact"},{"name":"decreased mRNA level during cellular response to diethyl maleate","type":"narrow"},{"name":"decreased transcript level during cellular response to diethyl maleate","type":"exact"},{"name":"reduced RNA level during cellular response to diethyl maleate","type":"exact"}],"termid":"FYPO:0004134"}


id: PBO:0050883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IDNK gluconokinase","termid":"PBO:0050883"}


id: GO:0045023
data:
  {"annotated_genes":["SJAG_03689","SJAG_02621","SJAG_03356"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117842,119960,101377],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0070317"}]},"cv_name":"biological_process","definition":"The mitotic cell cycle phase transition whose occurrence commits the cell from the G0 quiescent state to the G1 phase. Under certain conditions, cells exit the cell cycle during G1 and remain in the G0 state as nongrowing, non-dividing (quiescent) cells. Appropriate stimulation of such cells induces them to return to G1 and resume growth and division. The G0 to G1 transition is accompanied by many changes in the program of gene expression.","definition_xrefs":["ISBN:0716731363","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03356":null,"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"G0 to G1 transition","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0045023","terms_by_termid":{"GO:0070317":null}}


id: MONDO:0010505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intellectual disability-balding-patella luxation-acromicria syndrome is characterized by severe intellectual deficit, patella luxations, acromicria, hypogonadism, facial dysmorphism (including midface hypoplasia and premature frontotemporal balding). It has been described in three unrelated males.","definition_xrefs":["Orphanet:3041"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"acromelic dysplasia","termid":"MONDO:0019695"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability-balding-patella luxation-acromicria syndrome","secondary_identifiers":["MEDGEN:401129","MESH:C536638","OMIM:300977","SCTID:722002002","UMLS:C1866985","GARD:257"],"synonyms":[{"name":"SCHOLTE syndrome","type":"related"},{"name":"SHLTS","type":"exact"},{"name":"Scholte syndrome","type":"exact"},{"name":"Scholte-Begeer-van Essen syndrome","type":"exact"},{"name":"early balding, patella luxation, acromicria and hypogonadism","type":"related"},{"name":"early balding, patella luxation, acromicria, and hypogonadism","type":"related"}],"termid":"MONDO:0010505","xrefs":{"Monarch":{"xref_id":"0010505"}}}


id: PBO:0028652
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_snRNA_3'-end_processing","termid":"PBO:0028652"}


id: GO:0140789
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a phosphorylated histone + H2O = a protein + phosphate.","definition_xrefs":["PMID:19351884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein phosphatase activity","termid":"GO:0004721"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0140096","GO:0016787","GO:0004721","GO:0003824","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"histone phosphatase activity","termid":"GO:0140789"}


id: PBO:0074208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 41 member 1","termid":"PBO:0074208"}


id: MONDO:0021718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of several peripheral nerves.","definition_xrefs":["NCIT:C26864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyneuropathy","termid":"MONDO:0001824"},{"relation_name":"is_a","term_name":"neuritis","termid":"MONDO:0002122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"polyneuritis","secondary_identifiers":["UMLS:C0032541","GTR:AN1353837","SCTID:76886005","GTR:AN1355640","HP:0031003","MEDGEN:46005"],"synonyms":[{"name":"Inflammatory polyneuropathy","type":"related"},{"name":"Multiple neuritis","type":"related"},{"name":"Polyneuritides","type":"related"},{"name":"Polyneuritis","type":"related"},{"name":"inflammatory polyneuropathy","type":"related"},{"name":"polyneuritis","type":"exact"}],"termid":"MONDO:0021718","xrefs":{"Monarch":{"xref_id":"0021718"}}}


id: PBO:0040865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic helix-loop-helix ARNT like 2","termid":"PBO:0040865"}


id: GO:0047114
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydro-7,8-dihydroxykynurenate + NAD+ = 7,8-dihydroxykynurenate + H+ + NADH.","definition_xrefs":["RHEA:22248","EC:1.3.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"kynurenate-7,8-dihydrodiol dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03251","MetaCyc:1.3.1.18-RXN"],"synonyms":[{"name":"7,8-dihydro-7,8-dihydroxykynurenate dehydrogenase activity","type":"related"},{"name":"7,8-dihydro-7,8-dihydroxykynurenate:NAD+ oxidoreductase activity","type":"related"},{"name":"7,8-dihydroxykynurenic acid 7,8-diol dehydrogenase activity","type":"related"}],"termid":"GO:0047114"}


id: PBO:0003104
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WHIskey","termid":"PBO:0003104"}


id: PBO:0086358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative 4a-hydroxytetrahydrobiopterin dehydratase; green fluorescent protein (GFP)-fusion protein localizes to mitochondria and is induced in response to the DNA-damaging agent MMS","termid":"PBO:0086358"}


id: GO:0140864
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a ubiquitin molecule to histone 2A at the lysine-129 residue.","definition_xrefs":["PMID:28624371"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A ubiquitin ligase activity","termid":"GO:0141053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004842"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0019787"}],"interesting_parent_ids":["GO:0019787","GO:0016740","GO:0004842","GO:0003674","GO:0140096","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"histone H2AK129 ubiquitin ligase activity","synonyms":[{"name":"histone H2A-K129 ubiquitin ligase activity","type":"exact"},{"name":"histone ubiquitin ligase activity (H2A-K129 specific)","type":"exact"}],"termid":"GO:0140864"}


id: PBO:0043823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcineurin like phosphoesterase domain containing 1","termid":"PBO:0043823"}


id: MONDO:0012352
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vasculitis, lymphocytic, cutaneous small vessel","secondary_identifiers":["OMIM:609817","MEDGEN:344012","UMLS:C1853293","MESH:C565222"],"synonyms":[{"name":"vasculitis, lymphocytic, cutaneous small vessel","type":"exact"}],"termid":"MONDO:0012352","xrefs":{"Monarch":{"xref_id":"0012352"}}}


id: SO:0002078
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that intersects the intron of an incompletely annotated transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete_transcript_variant","termid":"SO:0002075"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incomplete_transcript_intronic_variant","synonyms":[{"name":"incomplete transcript intronic variant","type":"exact"}],"termid":"SO:0002078"}


id: PBO:0071466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 7","termid":"PBO:0071466"}


id: PBO:0071791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P/MRP subunit p30","termid":"PBO:0071791"}


id: PBO:0003641
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression autoregulated","termid":"PBO:0003641"}


id: GO:0002610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of plasmacytoid dendritic cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dendritic cell antigen processing and presentation","termid":"GO:0002604"},{"relation_name":"regulates","term_name":"plasmacytoid dendritic cell antigen processing and presentation","termid":"GO:0002470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of plasmacytoid dendritic cell antigen processing and presentation","termid":"GO:0002610"}


id: PBO:0063925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoinositide-3-kinase regulatory subunit 4","termid":"PBO:0063925"}


id: PBO:0001868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit Mrp10 (predicted)","termid":"PBO:0001868"}


id: PR:Q9UTQ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DnaJ homolog subfamily C member 9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01605","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized J domain-containing protein C1071.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1071.09c","secondary_identifiers":["UniProtKB:Q9UTQ5"],"synonyms":[{"name":"Spom972h-DNAJC9","type":"exact"}],"termid":"PR:Q9UTQ5"}


id: MONDO:0015270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Butyrylcholinesterase (BChE) deficiency is a metabolic disorder characterized by prolonged apnoea after the use of certain anesthetic drugs, including the muscle relaxants succinylcholine or mivacurium and other ester local anesthetics. The duration of the prolonged apnoea varies significantly depending on the extent of the enzyme deficiency.","definition_xrefs":["Orphanet:132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease involving other neurotransmitter deficiency","termid":"MONDO:0019253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"butyrylcholinesterase deficiency","secondary_identifiers":["OMIM:617936","GARD:7482","SCTID:191397007","icd11.foundation:581237559","UMLS:C1283400","MESH:C537417","ICD9:289.89","MEDGEN:220923"],"synonyms":[{"name":"Acholinesterasemia","type":"related"},{"name":"BCHED","type":"related"},{"name":"Suxamethonium sensitivity","type":"related"},{"name":"apnea, postanesthetic","type":"related"},{"name":"apnea, postanesthetic, susceptibility to, due to BCHE deficiency","type":"exact"},{"name":"butyrylcholinesterase deficiency","type":"exact"},{"name":"butyrylcholinesterase deficiency, fluoride-resistant, Japanese type","type":"related"},{"name":"cholinesterase 2 deficiency","type":"related"},{"name":"hypocholinesterasemia, fluoride-resistant, Japanese type","type":"related"},{"name":"pseudocholinesterase E1","type":"related"},{"name":"pseudocholinesterase deficiency","type":"related"},{"name":"succinylcholine sensitivity","type":"related"}],"termid":"MONDO:0015270","xrefs":{"Monarch":{"xref_id":"0015270"}}}


id: GO:0010636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of merging of two or more mitochondria within a cell to form a single compartment.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrial fusion","termid":"GO:0010635"},{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"positively_regulates","term_name":"mitochondrial fusion","termid":"GO:0008053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"positively_regulates","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0008150","GO:0007005"],"is_obsolete":false,"name":"positive regulation of mitochondrial fusion","termid":"GO:0010636"}


id: PBO:0001537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HbrB family protein","termid":"PBO:0001537"}


id: PBO:0075395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sp8 transcription factor","termid":"PBO:0075395"}


id: MONDO:0019027
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of frontootopalatodigital syndrome, characterized by deafness, cleft palate, and characteristic digital anomalies. OPD syndrome is divided into two forms based on severity: the milder form designated OPD type 1 (OPD1), and the more severe and often lethal form designated OPD type 2 (OPD2). OPD is an X-linked disorder. Two other genetic disorders with features overlapping OPD, frontometaphyseal dysplasia (FMD) and osteodysplasty, Melnick-Needles type (MNS) have been described; thus OPD1, OPD2, FMD, and MNS are allelic disorders.","definition_xrefs":["Orphanet:669"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"obsolete branchial arch or oral-acral syndrome (obsolete MONDO:0015334)","termid":"MONDO:0015334"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"otopalatodigital syndrome spectrum disorder","termid":"MONDO:0018233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otopalatodigital syndrome","secondary_identifiers":["GARD:7293","icd11.foundation:1506946342","SCTID:767130007","MEDGEN:1843451","UMLS:C5779873"],"synonyms":[{"name":"oto-palatal-digital syndrome","type":"exact"},{"name":"oto-palato-digital syndrome","type":"exact"},{"name":"type 2 (Andre syndrome)","type":"narrow"}],"termid":"MONDO:0019027","xrefs":{"Monarch":{"xref_id":"0019027"}}}


id: PBO:0091461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal-ubiquitin fusion protein Ubi3","termid":"PBO:0091461"}


id: PBO:0070497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 32","termid":"PBO:0070497"}


id: PBO:0030637
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_ATPase_activity","termid":"PBO:0030637"}


id: GO:1900243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of synaptic vesicle endocytosis.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endocytosis","termid":"GO:0045806"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle endocytosis","termid":"GO:1900242"},{"relation_name":"is_a","term_name":"negative regulation of synaptic vesicle recycling","termid":"GO:1903422"},{"relation_name":"negatively_regulates","term_name":"synaptic vesicle endocytosis","termid":"GO:0048488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"negative regulation of synaptic vesicle endocytosis","synonyms":[{"name":"down regulation of synaptic vesicle endocytosis","type":"exact"},{"name":"down regulation of synaptic vesicle retrieval","type":"related"},{"name":"down-regulation of synaptic vesicle endocytosis","type":"exact"},{"name":"down-regulation of synaptic vesicle retrieval","type":"related"},{"name":"downregulation of synaptic vesicle endocytosis","type":"exact"},{"name":"downregulation of synaptic vesicle retrieval","type":"related"},{"name":"inhibition of synaptic vesicle endocytosis","type":"narrow"},{"name":"inhibition of synaptic vesicle retrieval","type":"related"},{"name":"negative regulation of synaptic vesicle retrieval","type":"related"}],"termid":"GO:1900243"}


id: PR:Q04635
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- esc1 gene.","definition_xrefs":["UniProtKB:Q04635","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein esc1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56F8.16","synonyms":[{"name":"Spom972h-esc1","type":"exact"}],"termid":"PR:Q04635"}


id: GO:0018990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The shedding of the old chitin-based cuticlar fragments during the molting cycle. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molting cycle process","termid":"GO:0022404"},{"relation_name":"part_of","term_name":"molting cycle, chitin-based cuticle","termid":"GO:0007591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ecdysis, chitin-based cuticle","termid":"GO:0018990"}


id: GO:1901029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"negative regulation of mitochondrial membrane permeability","termid":"GO:0035795"},{"relation_name":"is_a","term_name":"regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway","termid":"GO:1901028"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic signaling pathway","termid":"GO:2001234"},{"relation_name":"negatively_regulates","term_name":"mitochondrial outer membrane permeabilization","termid":"GO:0097345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"negatively_regulates","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0023052","GO:0006810","GO:0007005"],"is_obsolete":false,"name":"negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway","synonyms":[{"name":"down regulation of MOMP","type":"exact"},{"name":"down regulation of mitochondrial outer membrane permeabilization","type":"exact"},{"name":"down-regulation of MOMP","type":"exact"},{"name":"down-regulation of mitochondrial outer membrane permeabilization","type":"exact"},{"name":"downregulation of MOMP","type":"exact"},{"name":"downregulation of mitochondrial outer membrane permeabilization","type":"exact"},{"name":"inhibition of MOMP","type":"narrow"},{"name":"inhibition of mitochondrial outer membrane permeabilization","type":"narrow"},{"name":"negative regulation of MOMP","type":"exact"},{"name":"negative regulation of mitochondrial outer membrane permeabilization","type":"broad"}],"termid":"GO:1901029"}


id: MONDO:0006118
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Breast fibrocystic change characterized by the prominence of fibrotic changes in the parenchyma.","definition_xrefs":["NCIT:C3660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"non-proliferative fibrocystic change of the breast","termid":"MONDO:0003724"},{"relation_name":"is_a","term_name":"breast neoplasm","termid":"MONDO:0021100"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast fibrosis","secondary_identifiers":["SCTID:29070004","UMLS:C0156318","DOID:10353","EFO:1000145","ICD10CM:N60.3","ICD9:610.3","MEDGEN:57627"],"synonyms":[{"name":"breast fibrosclerosis","type":"exact"},{"name":"breast fibrosis","type":"exact"},{"name":"fibrosclerosis of breast","type":"exact"},{"name":"fibrosclerosis of the breast","type":"exact"},{"name":"fibrosis of breast","type":"exact"},{"name":"fibrosis of the breast","type":"exact"}],"termid":"MONDO:0006118","xrefs":{"Monarch":{"xref_id":"0006118"}}}


id: MONDO:0024525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary Fanconi syndrome","termid":"MONDO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Fanconi renotubular syndrome 1","secondary_identifiers":["DOID:0080757","UMLS:C4551503","MEDGEN:1635492","OMIM:134600"],"synonyms":[{"name":"DeToni-Debré-Fanconi syndrome","type":"exact"},{"name":"FRTS1","type":"exact"},{"name":"Fanconi renotubular syndrome","type":"related"},{"name":"Fanconi renotubular syndrome 1","type":"exact"},{"name":"Fanconi syndrome without cystinosis","type":"related"},{"name":"Luder-Sheldon syndrome","type":"related"},{"name":"adult Fanconi syndrome","type":"related"},{"name":"primary Fanconi renal syndrome","type":"exact"},{"name":"primary Fanconi renotubular syndrome","type":"exact"},{"name":"renal Fanconi syndrome","type":"related"}],"termid":"MONDO:0024525","xrefs":{"Monarch":{"xref_id":"0024525"}}}


id: MONDO:0003734
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"adult central nervous system teratoma","termid":"MONDO:0003731"},{"relation_name":"is_a","term_name":"central nervous system immature teratoma","termid":"MONDO:0003735"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adult central nervous system immature teratoma","secondary_identifiers":["NCIT:C27401","MEDGEN:231036","DOID:6018","UMLS:C1332193"],"synonyms":[{"name":"adult central nervous system immature teratoma","type":"exact"}],"termid":"MONDO:0003734","xrefs":{"Monarch":{"xref_id":"0003734"}}}


id: MONDO:0009076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive disorder caused by mutations in the GJB2 gene, encoding gap junction beta-2 protein. The condition is characterized by profound sensorineural hearing loss and may be associated with vestibular dysfunction.","definition_xrefs":["NCIT:C129022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 1A","secondary_identifiers":["MESH:C567134","MEDGEN:388720","GARD:1697","OMIM:220290","UMLS:C2673759","DOID:0110475"],"synonyms":[{"name":"DFNB1","type":"narrow"},{"name":"DFNB1A","type":"narrow"},{"name":"GJB2-related deafness","type":"narrow"},{"name":"autosomal recessive deafness 1A","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 1A","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 1A","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 1A","type":"exact"},{"name":"connexin 26 deafness","type":"narrow"},{"name":"deafness nonsyndromic, connexin 26 linked","type":"narrow"},{"name":"deafness, autosomal recessive 1A","type":"narrow"},{"name":"deafness, autosomal recessive 1a, autosomal recessive, digenic dominant","type":"narrow"},{"name":"deafness, autosomal recessive type 1A","type":"narrow"},{"name":"deafness, digenic GJB2/GJB6, Autosomal recessive, Digenic dominant","type":"exact"},{"name":"deafness, digenic, GJB2/GJB3","type":"narrow"},{"name":"deafness, digenic, GJB2/GJB3, Autosomal recessive, Digenic dominant","type":"exact"},{"name":"deafness, digenic, GJB2/GJB6","type":"narrow"}],"termid":"MONDO:0009076","xrefs":{"Monarch":{"xref_id":"0009076"}}}


id: PBO:0080856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YES proto-oncogene 1, Src family tyrosine kinase","termid":"PBO:0080856"}


id: PATO:0000422
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A nutritional quality inhering in a bearer by virtue of the bearer's inability to synthesize a particular organic compound required for its growth.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Auxotrophic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trophic quality","termid":"PATO:0000056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"auxotrophic","termid":"PATO:0000422"}


id: PBO:0077306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM44 antisense RNA 1","termid":"PBO:0077306"}


id: MONDO:0016302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dextro-looped transposition of the great arteries","termid":"MONDO:0019443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"isolated congenitally uncorrected transposition of the great arteries","secondary_identifiers":["GARD:20502","MEDGEN:1842921","Orphanet:216718","UMLS:C5679810"],"synonyms":[{"name":"isolated congenitally uncorrected transposition of the great vessels","type":"exact"}],"termid":"MONDO:0016302","xrefs":{"Monarch":{"xref_id":"0016302"}}}


id: PATO:0002064
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's delimited by a surface with holes.","definition_xrefs":["PATOC:me"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fenestrated","termid":"PATO:0002064"}


id: PBO:0070103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 17 pseudogene","termid":"PBO:0070103"}


id: MONDO:0017451
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-syndromic brachydactyly that involves the manus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic brachydactyly","termid":"MONDO:0017424"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-syndromic brachydactyly of fingers","secondary_identifiers":["Orphanet:294996"],"synonyms":[{"name":"manus non-syndromic brachydactyly","type":"exact"},{"name":"non-syndromic brachydactyly of manus","type":"exact"},{"name":"short fingers","type":"exact"}],"termid":"MONDO:0017451","xrefs":{"Monarch":{"xref_id":"0017451"}}}


id: MONDO:0020483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acetazolamide-responsive myotonia is a form of potassium-aggravated myotonia (PAM) which shows dramatic improvement with the use of acetazolamide (ACZ).","definition_xrefs":["Orphanet:99736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium-aggravated myotonia","termid":"MONDO:0018959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetazolamide-responsive myotonia","secondary_identifiers":["SCTID:715793003","MEDGEN:902539","UMLS:C4275008","GARD:16906","icd11.foundation:1452993937"],"synonyms":[{"name":"ACZ-responsive congenital myotonia","type":"exact"},{"name":"ACZ-responsive myotonia","type":"exact"},{"name":"Acetazolamide-responsive congenital myotonia","type":"exact"},{"name":"myotonia-painful contractions syndrome","type":"exact"},{"name":"painful congenital myotonia","type":"exact"},{"name":"painful myotonia","type":"exact"}],"termid":"MONDO:0020483","xrefs":{"Monarch":{"xref_id":"0020483"}}}


id: PBO:0055928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A16, pseudogene","termid":"PBO:0055928"}


id: PBO:0083317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF HSE1/YHL002W","termid":"PBO:0083317"}


id: PBO:0045788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epididymal protein 3C, pseudogene","termid":"PBO:0045788"}


id: PBO:0034340
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_breakdown_of","termid":"PBO:0034340"}


id: PBO:0049359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 17","termid":"PBO:0049359"}


id: MONDO:0015048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"amelogenesis imperfecta","termid":"MONDO:0019507"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta type 2","secondary_identifiers":["UMLS:C0399372","Orphanet:100033","MESH:C536606","MEDGEN:97994","GARD:8349","ICD9:520.5","SCTID:109475005"],"synonyms":[{"name":"amelogenesis imperfecta hypomaturation type","type":"related"},{"name":"hypomaturation amelogenesis imperfecta","type":"exact"}],"termid":"MONDO:0015048","xrefs":{"Monarch":{"xref_id":"0015048"}}}


id: MONDO:1011824
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"horn cancer, non-human animal","secondary_identifiers":["OMIA:001859"],"termid":"MONDO:1011824","xrefs":{"Monarch":{"xref_id":"1011824"}}}


id: GO:1903441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a ciliary membrane.","definition_xrefs":["GOC:cilia","GOC:TermGenie","PMID:22139371","GO_REF:0000087","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cilium","termid":"GO:0061512"},{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"},{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to ciliary membrane","synonyms":[{"name":"protein localisation in ciliary membrane","type":"exact"},{"name":"protein localisation to ciliary membrane","type":"exact"},{"name":"protein localization in ciliary membrane","type":"exact"}],"termid":"GO:1903441"}


id: PBO:0036115
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_dephosphorylation_during_vegetative_growth","termid":"PBO:0036115"}


id: MONDO:0060627
data:
  {"annotated_genes":["SJAG_03292"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86862],"is_not":false,"summary":null,"term":"MONDO:0060627"}]},"cv_name":"mondo","definition":"A rare, genetic, syndromic intellectual disability characterized by global developmental delay, early-onset seizures, cerebellar atrophy, osteopenia, nystagmus and dysmorphic facial features, including bitemporal narrowing, prominent forehead, anteverted nares. Dysarthria, dysmetria, ataxic gait, spasticity and dysmorphic features have also been associated.","definition_xrefs":["Orphanet:529665"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"central nervous system malformation","termid":"MONDO:0020022"},{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"disorder of GPI anchor biosynthesis","termid":"MONDO:0024321"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03292":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025","MONDO:0002525","MONDO:0024322"],"is_obsolete":false,"name":"glycosylphosphatidylinositol biosynthesis defect 15","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4540520","OMIM:617810","GARD:17969","MEDGEN:1615160"],"synonyms":[{"name":"GPIBD15","type":"related"},{"name":"developmental delay, epilepsy, cerebellar atrophy, and osteopenia","type":"related"},{"name":"glycosylphosphatidylinositol biosynthesis defect 15","type":"exact"}],"termid":"MONDO:0060627","terms_by_termid":{"MONDO:0060627":null},"xrefs":{"Monarch":{"xref_id":"0060627"}}}


id: MONDO:0004858
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Blockage of the normal flow of the contents of the gallbladder.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gallbladder disorder","termid":"MONDO:0005281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"occlusion of gallbladder","secondary_identifiers":["DOID:9714","icd11.foundation:1945915335","ICD10CM:K82.0","ICD9:575.2","MEDGEN:57845","UMLS:C0156214","SCTID:197416005"],"synonyms":[{"name":"obstruction of gallbladder","type":"exact"}],"termid":"MONDO:0004858","xrefs":{"Monarch":{"xref_id":"0004858"}}}


id: PBO:0089272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm2-8 complex subunit Lsm8","termid":"PBO:0089272"}


id: PBO:0078774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 2-6","termid":"PBO:0078774"}


id: PBO:0070354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 27","termid":"PBO:0070354"}


id: PBO:0003271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor EF-1 alpha Ef1a-c","termid":"PBO:0003271"}


id: MONDO:0005436
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Postoperative ventricular dysfunction (VnD) occurs in 9-20% of coronary artery bypass graft (CABG) surgical patients and is associated with increased postoperative morbidity and mortality.","definition_xrefs":["EFO:0004889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coronary artery disorder","termid":"MONDO:0005010"},{"relation_name":"is_a","term_name":"cardiac ventricle disorder","termid":"MONDO:0045001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"postoperative ventricular dysfunction","termid":"MONDO:0005436","xrefs":{"Monarch":{"xref_id":"0005436"}}}


id: PBO:0042760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 43","termid":"PBO:0042760"}


id: MONDO:0100259
data:
  {"annotated_genes":["SJAG_02619"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008953"},{"annotations":[89003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011101"}]},"cv_name":"mondo","definition":"Any Zellweger spectrum disorder in which the cause of the disease is a mutation in the PEX1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Zellweger spectrum disorders","termid":"MONDO:0019609"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02619":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0019053","MONDO:0005559","MONDO:0005244","MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"peroxisome biogenesis disorder due to PEX1 defect","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"PEX1 related Zellweger spectrum disorder","type":"exact"},{"name":"peroxisome biogenesis disorder due to PEX1 defect","type":"exact"}],"termid":"MONDO:0100259","terms_by_termid":{"MONDO:0008953":null,"MONDO:0011101":null},"xrefs":{"Monarch":{"xref_id":"0100259"}}}


id: PBO:0003547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex non-SMC subunit Nse5","termid":"PBO:0003547"}


id: GO:1990846
data:
  {"annotated_genes":["SJAG_01348","SJAG_02874"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97307,98893],"is_not":false,"summary":null,"term":"GO:1990846"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of ribonucleoside-diphosphate reductase.","definition_xrefs":["PMID:16317005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01348":null,"SJAG_02874":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0004857","GO:0030234","GO:0140678"],"is_obsolete":false,"name":"ribonucleoside-diphosphate reductase inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990846","terms_by_termid":{"GO:1990846":null}}


id: GO:0106267
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3-chloro-2,4,6-trihydroxyphenyl)hexan-1-one + chloride + FADH2 + O2 = (3,5-dichloro-2,4,6-trihydroxyphenyl)hexan-1-one + FAD + 2 H2O.","definition_xrefs":["RHEA:64360","PMID:20231486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3,5 dichloro-THPH synthase activity","termid":"GO:0106267"}


id: PBO:0054700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2109","termid":"PBO:0054700"}


id: FYECO:0000215
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition where the pH of the medium or assay buffer is lower than the standard pombe growth medium of pH of ~5.6.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low pH","termid":"FYECO:0000215"}


id: PATO:0002404
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Affecting a segment or segments.","definition_xrefs":["PATOC:MPATH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"segmental","termid":"PATO:0002404"}


id: PBO:0082054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-5' exoribonuclease; component of the mitochondrial degradosome along with the ATP-dependent RNA helicase Suv3p; the degradosome associates with the ribosome and mediates turnover of aberrant or unprocessed RNAs","termid":"PBO:0082054"}


id: PBO:0033756
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_spindle_pole_body","termid":"PBO:0033756"}


id: GO:1990687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around an endoplasmic reticulum-derived vesicle to the lipid bilayer membrane of the ERGIC. Such vesicles include COPII-coated transport vesicles involved in anterograde transport.","definition_xrefs":["PMID:16038056","PMID:24119662","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion with endoplasmic reticulum-Golgi intermediate compartment (ERGIC) membrane","termid":"GO:1990668"},{"relation_name":"part_of","term_name":"endoplasmic reticulum to Golgi vesicle-mediated transport","termid":"GO:0006888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"endoplasmic reticulum-derived vesicle fusion with endoplasmic reticulum-Golgi intermediate compartment (ERGIC) membrane","synonyms":[{"name":"ER-derived vesicle fusion with ER-Golgi intermediate compartment membrane","type":"exact"},{"name":"ER-derived vesicle fusion with ERGIC membrane","type":"exact"}],"termid":"GO:1990687"}


id: MONDO:0009594
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Metaphyseal chondrodysplasia, Kaitila type is a rare multiple metaphyseal dysplasia disease characterized by disproportionate short stature, short limbs and digits, tracheobronchial malacia and progressive thoracolumbar scoliosis. Radiographic imaging shows progression from marked metaphyseal dysplasia of tubular bones in childhood to short and broad bones with mild dysplasia of the joints in adulthood. There have been no further descriptions in the literature since 1982.","definition_xrefs":["Orphanet:166038"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"metaphyseal chondrodysplasia","termid":"MONDO:0000138"},{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"metaphyseal chondrodysplasia, Kaitila type","secondary_identifiers":["MEDGEN:344446","GARD:17018","MESH:C565400","OMIM:250230","UMLS:C1855217"],"synonyms":[{"name":"metaphyseal chondrodysplasia, Kaitila type","type":"exact"}],"termid":"MONDO:0009594","xrefs":{"Monarch":{"xref_id":"0009594"}}}


id: MONDO:0004427
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the supraglottic area of the larynx.","definition_xrefs":["NCIT:C6793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngeal neoplasm","termid":"MONDO:0021071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supraglottis neoplasm","secondary_identifiers":["DOID:8002","MEDGEN:87512","SCTID:126697005","UMLS:C0345726"],"synonyms":[{"name":"neoplasm of supraglottic part of larynx","type":"exact"},{"name":"neoplasm of supraglottis","type":"exact"},{"name":"neoplasm of the supraglottis","type":"exact"},{"name":"supraglottic neoplasm","type":"exact"},{"name":"supraglottic part of larynx neoplasm","type":"exact"},{"name":"supraglottic part of larynx neoplasm (disease)","type":"exact"},{"name":"supraglottic part of larynx tumor","type":"exact"},{"name":"supraglottic part of larynx tumour","type":"exact"},{"name":"supraglottic tumor","type":"exact"},{"name":"supraglottic tumour","type":"exact"},{"name":"supraglottis neoplasm","type":"exact"},{"name":"supraglottis tumor","type":"exact"},{"name":"supraglottis tumour","type":"exact"},{"name":"tumor of supraglottic part of larynx","type":"exact"},{"name":"tumor of supraglottis","type":"exact"},{"name":"tumor of the supraglottis","type":"exact"},{"name":"tumour of supraglottic part of larynx","type":"exact"},{"name":"tumour of supraglottis","type":"exact"},{"name":"tumour of the supraglottis","type":"exact"}],"termid":"MONDO:0004427","xrefs":{"Monarch":{"xref_id":"0004427"}}}


id: PBO:0053606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 639","termid":"PBO:0053606"}


id: PBO:0089051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase with rhodanese domain, unknown specificity","termid":"PBO:0089051"}


id: MOD:00679
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively adds oxygen atoms to a carbon atom of a residue and removes hydrogen atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxygenated residue","termid":"MOD:00676"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbon oxygenated residue","synonyms":[{"name":"COxyRes","type":"exact"}],"termid":"MOD:00679"}


id: PBO:0005860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylglycinamide formyltransferase (predicted)","termid":"PBO:0005860"}


id: MONDO:0015861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare uterine adnexal tumor (obsolete MONDO:0015861)","secondary_identifiers":["Orphanet:180220"],"synonyms":[{"name":"syn: Rare tumor of ovaries and fallopian tubes","type":"exact"}],"termid":"MONDO:0015861","xrefs":{"Monarch":{"xref_id":"0015861"}}}


id: PBO:0017823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory particle assembly protein Nas2 (predicted)","termid":"PBO:0017823"}


id: PBO:0061850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oleoyl-ACP hydrolase","termid":"PBO:0061850"}


id: PBO:0048699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylated lysosomal membrane protein","termid":"PBO:0048699"}


id: MONDO:0014024
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive spastic paraplegia type 43 is a rare, complex hereditary spastic paraplegia characterized by a childhood to adolescent onset of progressive lower limb spasticity, associated with mild to severe gait disturbances, extensor plantar responses, muscle weakness and severe distal atrophy, frequently with upper limb involvement. Additional features may include joint contractures, distal sensory loss and brisk or absent deep tendon reflexes. Other signs, such as depression, memory loss, optic atrophy (with vision loss) and brain iron deposition (revealed by brain imagery), have also been reported.","definition_xrefs":["Orphanet:320370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 43","secondary_identifiers":["DOID:0110795","MEDGEN:760531","GARD:17473","OMIM:615043","UMLS:C2680446","SCTID:764736001"],"synonyms":[{"name":"C19orf12 autosomal recessive complex spastic paraplegia","type":"exact"},{"name":"SPG43","type":"exact"},{"name":"autosomal recessive complex spastic paraplegia caused by mutation in C19orf12","type":"exact"},{"name":"autosomal recessive spastic paraplegia 43","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 43","type":"exact"},{"name":"hereditary spastic paraplegia type 43","type":"exact"},{"name":"spastic paraplegia 43, autosomal recessive","type":"related"}],"termid":"MONDO:0014024","xrefs":{"Monarch":{"xref_id":"0014024"}}}


id: MONDO:0004060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epithelioid sarcoma involving the extremities. It usually presents as nodular masses in the dermis and subcutaneous tissues or in the tendons and fascia. It frequently recurs and metastasizes to other anatomic sites. The most common sites of metastasis are the lungs, lymph nodes, bones, and brain.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelioid sarcoma","termid":"MONDO:0017387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"peripheral epithelioid sarcoma","secondary_identifiers":["DOID:6988","NCIT:C27473","MEDGEN:232131","UMLS:C1333306"],"synonyms":[{"name":"conventional epithelioid sarcoma","type":"exact"},{"name":"distal-type epithelioid sarcoma","type":"exact"}],"termid":"MONDO:0004060","xrefs":{"Monarch":{"xref_id":"0004060"}}}


id: PBO:0027908
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_telomere_during_meiosis","termid":"PBO:0027908"}


id: GO:1902884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to oxidative stress.","definition_xrefs":["GO_REF:0000058","GOC:kmv","GOC:TermGenie","PMID:16899554"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to oxidative stress","termid":"GO:1902882"},{"relation_name":"positively_regulates","term_name":"response to oxidative stress","termid":"GO:0006979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to oxidative stress","synonyms":[{"name":"activation of response to oxidative stress","type":"narrow"},{"name":"up regulation of response to oxidative stress","type":"exact"},{"name":"up-regulation of response to oxidative stress","type":"exact"},{"name":"upregulation of response to oxidative stress","type":"exact"}],"termid":"GO:1902884"}


id: GO:1903290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of ATP catabolic process.","definition_xrefs":["GOC:rl","GOC:BHF","PMID:10636900","GOC:TermGenie","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of ATP catabolic process (obsolete GO:1903290)","synonyms":[{"name":"down regulation of ATP breakdown","type":"exact"},{"name":"down regulation of ATP catabolic process","type":"exact"},{"name":"down regulation of ATP catabolism","type":"exact"},{"name":"down regulation of ATP degradation","type":"exact"},{"name":"down regulation of ATP hydrolysis","type":"narrow"},{"name":"down-regulation of ATP breakdown","type":"exact"},{"name":"down-regulation of ATP catabolic process","type":"exact"},{"name":"down-regulation of ATP catabolism","type":"exact"},{"name":"down-regulation of ATP degradation","type":"exact"},{"name":"down-regulation of ATP hydrolysis","type":"narrow"},{"name":"downregulation of ATP breakdown","type":"exact"},{"name":"downregulation of ATP catabolic process","type":"exact"},{"name":"downregulation of ATP catabolism","type":"exact"},{"name":"downregulation of ATP degradation","type":"exact"},{"name":"downregulation of ATP hydrolysis","type":"narrow"},{"name":"inhibition of ATP breakdown","type":"narrow"},{"name":"inhibition of ATP catabolic process","type":"narrow"},{"name":"inhibition of ATP catabolism","type":"narrow"},{"name":"inhibition of ATP degradation","type":"narrow"},{"name":"inhibition of ATP hydrolysis","type":"narrow"},{"name":"negative regulation of ATP breakdown","type":"exact"},{"name":"negative regulation of ATP catabolism","type":"exact"},{"name":"negative regulation of ATP degradation","type":"exact"},{"name":"negative regulation of ATP hydrolysis","type":"narrow"}],"termid":"GO:1903290"}


id: PBO:0042433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 37 pseudogene 2","termid":"PBO:0042433"}


id: PATO:0000484
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000484 tactile hyporesponsive (obsolete PATO:0000484)","termid":"PATO:0000484"}


id: PBO:0086967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit B of protein phosphatase 2A (PP2A); Zds1p/2p-dependent localization to cytoplasm promotes mitotic entry; localization to nucleus prevents mitotic exit; required for correct nuclear division, chromosome segregation during achiasmate meiosis; maintains nucleolar sequestration of Cdc14p in early meiosis; limits formation of PP2A-Rts1p holocomplexes to ensure timely dissolution of sister chromosome cohesion; controls phosphorylation and stability of Cln2p; homolog of mammalian B55","termid":"PBO:0086967"}


id: PBO:0001104
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by ammonia","termid":"PBO:0001104"}


id: MONDO:0001587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mucopolysaccharidosis type 4 (obsolete MONDO:0001587)","termid":"MONDO:0001587","xrefs":{"Monarch":{"xref_id":"0001587"}}}


id: PBO:0056821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 13A","termid":"PBO:0056821"}


id: PBO:0062504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily G member 5","termid":"PBO:0062504"}


id: GO:0001639
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A G protein-coupled receptor that binds glutamate and is linked to the inositol 1,4,5-trisphosphate/calcium signaling system.","definition_xrefs":["PMID:9016303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled glutamate receptor activity","termid":"GO:0098988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"PLC activating G protein-coupled glutamate receptor activity","synonyms":[{"name":"Group I metabotropic glutamate receptor","type":"related"},{"name":"PLC activating G-protein coupled glutamate receptor activity","type":"exact"},{"name":"PLC activating metabotropic glutamate receptor activity","type":"exact"},{"name":"group I metabotropic glutamate receptor activity","type":"related"},{"name":"phospholipase C activating metabotropic glutamate receptor activity","type":"exact"}],"termid":"GO:0001639"}


id: PBO:0056544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCF2L2 pseudogene 1","termid":"PBO:0056544"}


id: PBO:0074534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA G2","termid":"PBO:0074534"}


id: PBO:0062473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily G member 1","termid":"PBO:0062473"}


id: PBO:0062301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily M member 12 pseudogene","termid":"PBO:0062301"}


id: GO:0001601
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with gut peptide YY to initiate a change in cell activity.","definition_xrefs":["PMID:9315606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide Y receptor activity","termid":"GO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"peptide YY receptor activity","termid":"GO:0001601"}


id: PBO:0067303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 388, pseudogene","termid":"PBO:0067303"}


id: PBO:0078852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily C member 6","termid":"PBO:0078852"}


id: GO:0009561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the embryo sac over time, from its formation as the megaspore to the mature structure. The process begins when three of the four haploid megaspores disintegrate, and the fourth undergoes mitosis giving rise to a binucleate syncytial embryo sac. The two haploid nuclei migrate to the opposite poles of the embryo sac and then undergo two rounds of mitosis generating four haploid nuclei at each pole. One nucleus from each set of four migrates to the center of the cell. Cellularization occurs, resulting in an eight-nucleate seven-celled structure. This structure contains two synergid cells and an egg cell at the micropylar end, and three antipodal cells at the other end. A binucleate endosperm mother cell is formed at the center.","definition_xrefs":["GOC:jl","GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"embryo sac development","termid":"GO:0009553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"megagametogenesis","secondary_identifiers":["Wikipedia:Megagametogenesis"],"synonyms":[{"name":"embryo sac development from the megaspore","type":"exact"},{"name":"megagametophyte nucleus division","type":"exact"}],"termid":"GO:0009561"}


id: PBO:0068095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 402","termid":"PBO:0068095"}


id: PBO:0068912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 155, pseudogene","termid":"PBO:0068912"}


id: GO:0099402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Development of a plant organ, a multi-tissue plant structure that forms a functional unit.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"system development","termid":"GO:0048731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant organ development","synonyms":[{"name":"development of a plant organ","type":"exact"}],"termid":"GO:0099402"}


id: PBO:0060807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDUFV1 divergent transcript","termid":"PBO:0060807"}


id: PBO:0045242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C21","termid":"PBO:0045242"}


id: GO:0045264
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. All non-F1 subunits of the plasma membrane hydrogen-transporting ATP synthase, including integral and peripheral plasma membrane proteins.","definition_xrefs":["GOC:mtg_sensu","GOC:mah","PMID:10838056"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane proton-transporting ATP synthase complex, coupling factor F(o) (obsolete GO:0045264)","synonyms":[{"name":"hydrogen-transporting ATP synthase, F0 sector","type":"broad"},{"name":"proton-transporting ATP synthase complex, coupling factor F(0)","type":"broad"},{"name":"proton-transporting ATP synthase complex, coupling factor F(o)","type":"broad"}],"termid":"GO:0045264"}


id: PBO:0052568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine methyltransferase 2C pseudogene 5","termid":"PBO:0052568"}


id: PBO:0052041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junction plakoglobin","termid":"PBO:0052041"}


id: PBO:0052353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 4C, pseudogene","termid":"PBO:0052353"}


id: MONDO:0001537
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An urogenital tuberculosis involving a pathogenic inflammatory response in the epididymis.","definition_xrefs":["MONDO:patterns/specific_inflammatory_disease_by_site"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epididymitis","termid":"MONDO:0004779"},{"relation_name":"is_a","term_name":"male genital tuberculosis","termid":"MONDO:0006845"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberculous epididymitis","secondary_identifiers":["ICD9:016.46","ICD9:016.42","SCTID:83652003","ICD9:016.41","icd11.foundation:1092166548","ICD9:016.40","DOID:1251","MEDGEN:509077","ICD9:016.4","UMLS:C0152814"],"termid":"MONDO:0001537","xrefs":{"Monarch":{"xref_id":"0001537"}}}


id: PBO:0075234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 6 pseudogene 1","termid":"PBO:0075234"}


id: PBO:0044185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTP synthase 1","termid":"PBO:0044185"}


id: PBO:0058820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7977","termid":"PBO:0058820"}


id: PBO:0084397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm (Like Sm) protein; part of heteroheptameric complexes (Lsm2p-7p and either Lsm1p or 8p): cytoplasmic Lsm1p complex involved in mRNA decay; nuclear Lsm8p complex part of U6 snRNP and possibly involved in processing tRNA, snoRNA, and rRNA; protein increases in abundance and relocalizes from nucleus to cytoplasmic foci upon DNA replication stress","termid":"PBO:0084397"}


id: PBO:0081373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 212","termid":"PBO:0081373"}


id: PBO:0038664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase family member 2","termid":"PBO:0038664"}


id: PBO:0043208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC28 protein kinase regulatory subunit 1B pseudogene 1","termid":"PBO:0043208"}


id: GO:0160080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + indole(in) = ADP + phosphate + indole(out).","definition_xrefs":["PMID:37146609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ABC-type indole transporter activity","termid":"GO:0160080"}


id: PBO:0120067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3145","termid":"PBO:0120067"}


id: MONDO:0007124
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ectodermal dysplasia syndrome with defining features of ankyloblepharon filiforme adnatum (AFA), ectodermal abnormalities and a cleft lip and/or palate.","definition_xrefs":["Orphanet:1071"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"is_a","term_name":"TP63-related ectodermal dysplasia spectrum with limb and orofacial malformations","termid":"MONDO:1040001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0005093"],"is_obsolete":false,"name":"ankyloblepharon-ectodermal defects-cleft lip/palate syndrome","secondary_identifiers":["MESH:C535847","MEDGEN:98032","DOID:0090119","GARD:6571","UMLS:C0406709","OMIM:106260","SCTID:55821006","NORD:738"],"synonyms":[{"name":"AEC Syndrome","type":"exact"},{"name":"AEC syndrome","type":"exact"},{"name":"Ankyloblepharon ectodermal defects cleft lip/palate","type":"related"},{"name":"Ankyloblepharon-ectodermal defects-cleft lip and palate syndrome","type":"exact"},{"name":"Hay-Wells syndrome","type":"exact"},{"name":"Rapp-Hodgkins syndrome","type":"related"},{"name":"Seres-Santamaria Arimany Muniz syndrome","type":"related"},{"name":"ankyloblepharon-ectodermal defects-cleft LIP/palate","type":"related"},{"name":"cleft palate, ankyloblepharon, alveolar synechiae, and ectodermal defects","type":"related"}],"termid":"MONDO:0007124","xrefs":{"Monarch":{"xref_id":"0007124"}}}


id: MONDO:0700136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital metabolic disorder characterized by a deficiency in the enzyme ferrochelatase, which occurs in cattle.","definition_xrefs":["NCIT:C131472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bovine neoplasm","termid":"MONDO:0700134"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bovine protoporphyria","termid":"MONDO:0700136","xrefs":{"Monarch":{"xref_id":"0700136"}}}


id: MONDO:0013242
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any maturity-onset diabetes of the young in which the cause of the disease is a mutation in the BLK gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity-onset diabetes of the young","termid":"MONDO:0018911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0037792","MONDO:0005015","MONDO:0019254","MONDO:0005066"],"is_obsolete":false,"name":"maturity-onset diabetes of the young type 11","secondary_identifiers":["SCTID:609578001","UMLS:C3150618","GARD:15653","OMIM:613375","MEDGEN:461968","DOID:0111109"],"synonyms":[{"name":"BLK maturity-onset diabetes of the young (disease)","type":"exact"},{"name":"MODY11","type":"exact"},{"name":"maturity-onset diabetes of the young (disease) caused by mutation in BLK","type":"exact"},{"name":"maturity-onset diabetes of the young, type 11","type":"related"}],"termid":"MONDO:0013242","xrefs":{"Monarch":{"xref_id":"0013242"}}}


id: GO:0080172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that regulates the coordinated growth and establishes the non-random spatial arrangement of the cells in the petal epidermis.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"petal epidermis patterning","termid":"GO:0080172"}


id: GO:1900005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of serine-type endopeptidase activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endopeptidase activity","termid":"GO:0010950"},{"relation_name":"is_a","term_name":"regulation of serine-type endopeptidase activity","termid":"GO:1900003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of serine-type endopeptidase activity","synonyms":[{"name":"positive regulation of blood coagulation factor activity","type":"related"},{"name":"up regulation of blood coagulation factor activity","type":"related"},{"name":"up regulation of serine-type endopeptidase activity","type":"related"}],"termid":"GO:1900005"}


id: MONDO:0021085
data:
  {"annotated_genes":["SJAG_02261","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88859,88860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0001056"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm involving the stomach.","definition_xrefs":["NCIT:C3387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stomach disorder","termid":"MONDO:0004298"},{"relation_name":"is_a","term_name":"digestive system neoplasm","termid":"MONDO:0021223"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02261":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastric neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D013274","SCTID:126824007","UMLS:C0038356","EFO:0003897","MEDGEN:20958"],"synonyms":[{"name":"gastric neoplasm","type":"exact"},{"name":"gastric tumor","type":"exact"},{"name":"gastric tumour","type":"exact"},{"name":"neoplasm of stomach","type":"exact"},{"name":"neoplasm of the stomach","type":"exact"},{"name":"stomach neoplasm","type":"exact"},{"name":"stomach neoplasm (disease)","type":"exact"},{"name":"stomach tumor","type":"exact"},{"name":"stomach tumour","type":"exact"},{"name":"tumor of stomach","type":"exact"},{"name":"tumor of the stomach","type":"exact"},{"name":"tumour of stomach","type":"exact"},{"name":"tumour of the stomach","type":"exact"}],"termid":"MONDO:0021085","terms_by_termid":{"MONDO:0001056":null},"xrefs":{"Monarch":{"xref_id":"0021085"}}}


id: PBO:0029881
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_methylated_histone_residue_binding","termid":"PBO:0029881"}


id: GO:0004572
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the terminal (1->3)- and (1->6)-linked alpha-D-mannose residues in the mannosyl-oligosaccharide Man(5)(GlcNAc)(3).","definition_xrefs":["EC:3.2.1.114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyl-oligosaccharide mannosidase activity","termid":"GO:0015924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase activity","secondary_identifiers":["RHEA:56052","MetaCyc:3.2.1.114-RXN","Reactome:R-HSA-975814"],"synonyms":[{"name":"1,3-(1,6-)mannosyl-oligosaccharide alpha-D-mannohydrolase activity","type":"related"},{"name":"GlcNAc transferase I-dependent alpha1,3[alpha1,6]mannosidase activity","type":"related"},{"name":"Golgi alpha-mannosidase II","type":"related"},{"name":"ManII activity","type":"narrow"},{"name":"alpha-(1,3/6)-mannosidase activity","type":"related"},{"name":"alpha-D-mannosidase II","type":"related"},{"name":"alpha-mannosidase II","type":"related"},{"name":"exo-1,3-1,6-alpha-mannosidase activity","type":"related"},{"name":"mannosidase II activity","type":"narrow"},{"name":"mannosyl-oligosaccharide (1->3)-(1->6)-alpha-mannosidase activity","type":"exact"},{"name":"mannosyl-oligosaccharide (1->3,6)-alpha-mannosidase activity","type":"exact"},{"name":"mannosyl-oligosaccharide (1->3/6)-alpha-mannosidase activity","type":"exact"}],"termid":"GO:0004572"}


id: PATO:0002383
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A waxiness which is relatively low.","direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"},{"relation_name":"is_a","term_name":"waxiness","termid":"PATO:0002381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased waxiness","termid":"PATO:0002383"}


id: GO:0075130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont modulates the frequency, rate or extent of protein kinase-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete perturbation of host protein kinase-mediated signal transduction (obsolete GO:0075130)","synonyms":[{"name":"modulation by symbiont of host protein kinase-mediated signal transduction","type":"exact"}],"termid":"GO:0075130"}


id: MONDO:0016371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cranial neuralgia","termid":"MONDO:0016374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"combined hyperactive dysfunction syndrome of the cranial nerves","secondary_identifiers":["MEDGEN:1677292","GARD:20541","Orphanet:221078","icd11.foundation:457686735","UMLS:C5190851"],"termid":"MONDO:0016371","xrefs":{"Monarch":{"xref_id":"0016371"}}}


id: PBO:0073862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC9A9 antisense RNA 1","termid":"PBO:0073862"}


id: MONDO:0012889
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcoidosis, susceptibility to, 3","secondary_identifiers":["MEDGEN:436693","OMIM:612388","UMLS:C2676467"],"synonyms":[{"name":"SS3","type":"exact"},{"name":"sarcoidosis, susceptibility to, 3","type":"exact"}],"termid":"MONDO:0012889","xrefs":{"Monarch":{"xref_id":"0012889"}}}


id: GO:0033257
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex containing one Bcl protein and one or more copies of NF-kappaB2; formation of complexes of different stoichiometry depends on the Bcl3:NF-kappaB2 ratio, and allow Bcl3 to exert different regulatory effects on NF-kappaB2-dependent transcription.","definition_xrefs":["PMID:9407099","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"I-kappaB/NF-kappaB complex","termid":"GO:0033256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Bcl3/NF-kappaB2 complex","synonyms":[{"name":"Bcl3-NFKB2 complex","type":"related"},{"name":"Bcl3-p52 complex","type":"exact"}],"termid":"GO:0033257"}


id: PBO:0064880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 catalytic subunit alpha","termid":"PBO:0064880"}


id: PBO:0044719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 6 (pseudogene)","termid":"PBO:0044719"}


id: PBO:0072197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 14","termid":"PBO:0072197"}


id: GO:0030203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycosaminoglycans, any of a group of linear polysaccharides composed of repeating disaccharide units.","definition_xrefs":["PMID:38500384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycan metabolic process","termid":"GO:0006022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycosaminoglycan metabolic process","secondary_identifiers":["Reactome:R-HSA-1630316"],"synonyms":[{"name":"glycosaminoglycan metabolism","type":"exact"}],"termid":"GO:0030203"}


id: MONDO:1012444
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polled and multisystemic syndrome, non-human animal","termid":"MONDO:1011655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polled and multisystemic syndrome, cattle","secondary_identifiers":["OMIA:001736-9913"],"termid":"MONDO:1012444","xrefs":{"Monarch":{"xref_id":"1012444"}}}


id: FYPO:0006545
data:
  {"alleles_by_uniquename":{"SJAG_00370:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00370","name":"erg1delta","uniquename":"SJAG_00370:allele-1"},"SJAG_03360:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03360","name":"shc1delta","uniquename":"SJAG_03360:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121233,121234],"is_not":false,"summary":null,"term":"FYPO:0006545"}]},"cv_name":"fission_yeast_phenotype","definition":"A localization phenotype observed in the vegetative growth phase of the life cycle in which the distribution of one or more lipids in a cellular membrane is abnormal.","definition_xrefs":["GO:0097035","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"abnormal membrane organization during vegetative growth","termid":"FYPO:0001351"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00370":null,"SJAG_03360":null},"genotype_count":2,"genotypes_by_uniquename":{"erg1delta":{"display_name":"erg1delta","display_uniquename":"erg1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00370:allele-1","expression":"Null"}]}]},"shc1delta":{"display_name":"shc1delta","display_uniquename":"shc1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03360:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal membrane lipid distribution","references_by_uniquename":{"PMID:40195311":null},"single_locus_annotated_genes":["SJAG_00370","SJAG_03360"],"single_locus_genotype_uniquenames":["erg1delta","shc1delta"],"synonyms":[{"name":"abnormal membrane lipid distribution during mitotic cell cycle","type":"related"},{"name":"abnormal membrane lipid distribution during vegetative growth","type":"exact"},{"name":"abnormal regulation of membrane lipid distribution","type":"exact"}],"termid":"FYPO:0006545","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0006545":null}}


id: PBO:0002826
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates pss1","termid":"PBO:0002826"}


id: PBO:0050748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 10","termid":"PBO:0050748"}


id: MONDO:0014782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive limb-girdle muscular dystrophy type 2X is a rare subtype of autosomal recessive limb-girdle muscular dystrophy characterized by atrioventricular block resulting in repeated syncope episodes, elevated creatine kinase serum levels and adult-onset of slowly progressive proximal limb skeletal muscle weakness and atrophy. Muscular dystrophic changes observed in muscle biopsy include diameter variability, increased central nuclei, and presence of necrotic and regenerating fibers.","definition_xrefs":["Orphanet:476084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive limb-girdle muscular dystrophy","termid":"MONDO:0015152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive limb-girdle muscular dystrophy type 2X","secondary_identifiers":["GARD:17847","MEDGEN:1799561","UMLS:C5568138","OMIM:616812","DOID:0110290"],"synonyms":[{"name":"BVES autosomal recessive limb-girdle muscular dystrophy","type":"exact"},{"name":"LGMD2X","type":"exact"},{"name":"autosomal recessive limb-girdle muscular dystrophy caused by mutation in BVES","type":"exact"},{"name":"autosomal recessive limb-girdle muscular dystrophy-cardiac arrhythmia syndrome","type":"exact"},{"name":"muscular dystrophy, limb-girdle, autosomal recessive 25","type":"exact"},{"name":"muscular dystrophy, limb-girdle, type 2X","type":"exact"},{"name":"muscular dystrophy, limb-girdle, type 2x","type":"exact"}],"termid":"MONDO:0014782","xrefs":{"Monarch":{"xref_id":"0014782"}}}


id: PBO:0034802
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"residue T239 is T275 in the updated structure","termid":"PBO:0034802"}


id: PBO:0067091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 127, pseudogene","termid":"PBO:0067091"}


id: MONDO:0031632
data:
  {"annotated_genes":["SJAG_04085","SJAG_01058"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800438"},{"annotations":[87545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100217"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01058":null,"SJAG_04085":null},"genotype_count":0,"is_obsolete":false,"name":"developmental delay with short stature, dysmorphic facial features, and sparse hair","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4310801","OMIMPS:616901","DOID:0070476","MEDGEN:934768"],"termid":"MONDO:0031632","terms_by_termid":{"MONDO:0100217":null,"MONDO:0800438":null},"xrefs":{"Monarch":{"xref_id":"0031632"}}}


id: FYPO:0001030
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing dithiothreitol.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002058","FYPO:0002057","FYPO:0002060","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on dithiothreitol","synonyms":[{"name":"normal cell population growth in presence of dithiothreitol","type":"exact"},{"name":"normal cell population growth on 1,4-dithiothreitol","type":"exact"},{"name":"normal cell population growth on DTT","type":"exact"},{"name":"normal cell population growth on dithiothreitol","type":"exact"},{"name":"normal cellular response to dithiothreitol","type":"related"},{"name":"normal vegetative cell population growth on dithiothreitol","type":"exact"}],"termid":"FYPO:0001030"}


id: FYPO:0007089
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested normally at the mitotic G2/M phase transition when the cell is subject to sulfur starvation.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normally arrested mitotic cell cycle progression","termid":"FYPO:0001025"},{"relation_name":"is_a","term_name":"cell cycle arrest at mitotic G2/M phase transition during starvation","termid":"FYPO:0001151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cell cycle arrest at mitotic G2/M phase transition during sulfur starvation","synonyms":[{"name":"normal cell cycle arrest at mitotic G2/M phase transition during sulfur depletion","type":"exact"},{"name":"normal cell cycle arrest at mitotic G2/M phase transition during sulfur deprivation","type":"exact"},{"name":"normal cell cycle arrest at mitotic G2/M phase transition during sulfur limitation","type":"exact"},{"name":"normal cell cycle arrest in mitotic G2 phase during sulfur starvation","type":"related"},{"name":"normal mitotic cell cycle arrest at mitotic G2/M phase transition during sulfur starvation","type":"exact"}],"termid":"FYPO:0007089"}


id: PBO:0049668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronan binding protein 4","termid":"PBO:0049668"}


id: GO:1990270
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tetrameric protein complex consisting of two platelet-derived growth factor (PDGF) receptor subunits and two PDGF ligand subunits. Binding of the PDGF ligand dimer to the PDGF receptor in the plasma membrane induces receptor dimerization and activation. PDGFs are involved in a wide variety of signaling processes and are found in all vertebrates. At least two different receptor chains (A and B) and four types of ligand chains (A, B, C, and D) are known forming a wide variety of combinations of receptor-ligand complexes.","definition_xrefs":["GOC:bhm","PMID:11331882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"platelet-derived growth factor receptor-ligand complex","synonyms":[{"name":"PDGF complex","type":"broad"},{"name":"PDGF receptor-ligand complex","type":"exact"},{"name":"PDGF-AA-receptor alpha complex","type":"narrow"},{"name":"PDGF-AB-receptor alpha complex","type":"narrow"},{"name":"PDGF-AB-receptor beta complex","type":"narrow"},{"name":"PDGF-BB-receptor alpha complex","type":"narrow"},{"name":"PDGF-BB-receptor alpha-beta complex","type":"narrow"},{"name":"PDGF-BB-receptor beta complex","type":"narrow"},{"name":"PDGF-CC-receptor alpha complex","type":"narrow"},{"name":"PDGF-CC-receptor alpha-beta complex","type":"narrow"},{"name":"PDGF-CC-receptor beta complex","type":"narrow"},{"name":"PDGF-DD-receptor alpha-beta complex","type":"narrow"},{"name":"PDGF-DD-receptor beta complex","type":"narrow"},{"name":"receptor-ligand complex","type":"broad"}],"termid":"GO:1990270"}


id: MONDO:0034968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare ocular motility/alignment disorder (obsolete MONDO:0034968)","secondary_identifiers":["Orphanet:519355"],"termid":"MONDO:0034968","xrefs":{"Monarch":{"xref_id":"0034968"}}}


id: MONDO:0007658
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A large, or giant, congenital melanocytic nevus (LCMN or GCMN) is a pigmented skin lesion of more than 20 cm - or 40 cm- respectively, projected adult diameter, composed of melanocytes, and presenting with an elevated risk of malignant transformation.","definition_xrefs":["Orphanet:626"],"gene_count":0,"genotype_count":0,"name":"obsolete spitz nevus (obsolete MONDO:0007658)","termid":"MONDO:0007658","xrefs":{"Monarch":{"xref_id":"0007658"}}}


id: PBO:0044943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrodiol dehydrogenase","termid":"PBO:0044943"}


id: PBO:0091313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ABC1 kinase family protein, human ADCK5 ortholog, unknown role","termid":"PBO:0091313"}


id: PBO:0026860
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_chromosome_arm_condensation","termid":"PBO:0026860"}


id: GO:0001057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template that contains an RNA polymerase IV specific promoter to direct initiation and catalyses DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase IV activity (obsolete GO:0001057)","synonyms":[{"name":"DNA-directed RNA polymerase activity involved in transcription from RNA polymerase IV promoter","type":"exact"}],"termid":"GO:0001057"}


id: GO:0035302
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydroxylation of an ecdysteroid at carbon position 25.","definition_xrefs":["PMID:15350618"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"ecdysteroid 25-hydroxylase activity","termid":"GO:0035302"}


id: MOD:00256
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that dioxygenates an L-methionine residue to L-methionine sulfone.","definition_xrefs":["PubMed:9252331","OMSSA:115","PubMed:7791219","RESID:AA0251","Unimod:425#M","PubMed:12686488","PubMed:7786407","DeltaMass:205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur oxygenated L-methionine","termid":"MOD:00709"},{"relation_name":"is_a","term_name":"sulfur dioxygenated residue","termid":"MOD:01855"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-methionine sulfone","synonyms":[{"name":"(2S)-2-amino-4-(methylsulfonyl)butanoic acid","type":"exact"},{"name":"Dioxidation","type":"related"},{"name":"L-methionine S,S-dioxide","type":"exact"},{"name":"L-methionine sulfone","type":"exact"},{"name":"MOD_RES Methionine sulfone","type":"exact"},{"name":"MetO2","type":"exact"},{"name":"MethionylSulphone","type":"exact"},{"name":"Oxidation of Methionine (to Sulphone)","type":"exact"},{"name":"S,S-dioxymethionine","type":"exact"},{"name":"dihydroxy","type":"related"},{"name":"suphonem","type":"exact"}],"termid":"MOD:00256"}


id: PBO:0024480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PITH domain-containing protein","termid":"PBO:0024480"}


id: PBO:0062947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferation-associated 2G4 pseudogene 5","termid":"PBO:0062947"}


id: GO:0044393
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dynamic, actin-rich projection extending from the surface of a migrating animal cell.","definition_xrefs":["PMID:11429692","PMID:12153987","PMID:19095735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"microspike","termid":"GO:0044393"}


id: SO:0000403
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"U14 small nucleolar RNA (U14 snoRNA) is required for early cleavages of eukaryotic precursor rRNAs. In yeasts, this molecule possess a stem-loop region (known as the Y-domain) which is essential for function. A similar structure, but with a different consensus sequence, is found in plants, but is absent in vertebrates.","definition_xrefs":["PMID:2551119"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"U14_snoRNA_primary_transcript","termid":"SO:0005837"},{"relation_name":"is_a","term_name":"C_D_box_snoRNA","termid":"SO:0000593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U14_snoRNA","secondary_identifiers":["SO:0005839"],"synonyms":[{"name":"U14 small nucleolar RNA","type":"exact"},{"name":"U14 snoRNA","type":"exact"},{"name":"small nucleolar RNA U14","type":"exact"},{"name":"snoRNA U14","type":"exact"}],"termid":"SO:0000403"}


id: GO:0030782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an (S)-7,8,13,14-tetrahydroprotoberberine + S-adenosyl-L-methionine = an (S)-cis-N-methyl-7,8,13,14-tetrahydroprotoberberine + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:76067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(S)-tetrahydroprotoberberine N-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-23969","EC:2.1.1.122"],"synonyms":[{"name":"S-adenosyl-L-methionine:(S)-7,8,13,14-tetrahydroprotoberberine cis-N-methyltransferase activity","type":"related"},{"name":"tetrahydroprotoberberine cis-N-methyltransferase activity","type":"related"}],"termid":"GO:0030782"}


id: PBO:0075880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST3GAL5 pseudogene 1","termid":"PBO:0075880"}


id: GO:0071231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a folic acid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to folic acid","termid":"GO:0051593"},{"relation_name":"is_a","term_name":"cellular response to vitamin","termid":"GO:0071295"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to folic acid","synonyms":[{"name":"response to folate","type":"exact"},{"name":"response to vitamin B9","type":"exact"}],"termid":"GO:0071231"}


id: MONDO:0015358
data:
  {"annotated_genes":["SJAG_00252","SJAG_00031","SJAG_01383"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011002"},{"annotations":[88764,88763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032792"}]},"cv_name":"mondo","definition":"A group of slowly progressive inherited disorders affecting motor and sensory peripheral nerves. Subtypes include HMSNs I-VII. HMSN I and II both refer to CHARCOT-MARIE-Tooth DISEASE. HMSN III refers to hypertrophic neuropathy of infancy. HMSN IV refers to REFSUM DISEASE. HMSN V refers to a condition marked by a hereditary motor and sensory neuropathy associated with spastic paraplegia (see SPASTIC PARAPLEGIA, HEREDITARY). HMSN VI refers to HMSN associated with an inherited optic atrophy (OPTIC ATROPHIES, HEREDITARY), and HMSN VII refers to HMSN associated with retinitis pigmentosa. (From Adams et al., Principles of Neurology, 6th ed, p1343)","definition_xrefs":["MESH:D015417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00252":null,"SJAG_01383":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"hereditary motor and sensory neuropathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0027888","ICD10CM:G60.0","icd11.foundation:1538134578","SCTID:398100001","NANDO:2200855","GARD:12685","MEDGEN:45066","Orphanet:140450"],"synonyms":[{"name":"HMSN","type":"exact"}],"termid":"MONDO:0015358","terms_by_termid":{"MONDO:0011002":null,"MONDO:0032792":null},"xrefs":{"Monarch":{"xref_id":"0015358"}}}


id: PBO:0085586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in assembly and export of the large ribosomal subunit; nucleolar protein; constituent of 66S pre-ribosomal particles; contains a sigma(70)-like motif, which is thought to bind RNA","termid":"PBO:0085586"}


id: GO:0102968
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (6E)-8-hydroxygeranial + NADP = (6E)-8-oxogeranial + NADPH + H+.","definition_xrefs":["RHEA:32611","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"10-hydroxygeranial oxidoreductase activity","secondary_identifiers":["MetaCyc:RXN-9369"],"termid":"GO:0102968"}


id: GO:0032224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of cholinergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic transmission, cholinergic","termid":"GO:0032222"},{"relation_name":"is_a","term_name":"positive regulation of synaptic transmission","termid":"GO:0050806"},{"relation_name":"positively_regulates","term_name":"synaptic transmission, cholinergic","termid":"GO:0007271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of synaptic transmission, cholinergic","synonyms":[{"name":"activation of synaptic transmission, cholinergic","type":"narrow"},{"name":"stimulation of synaptic transmission, cholinergic","type":"narrow"},{"name":"up regulation of synaptic transmission, cholinergic","type":"exact"},{"name":"up-regulation of synaptic transmission, cholinergic","type":"exact"},{"name":"upregulation of synaptic transmission, cholinergic","type":"exact"}],"termid":"GO:0032224"}


id: GO:1990555
data:
  {"annotated_genes":["SJAG_00671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90228],"is_not":false,"summary":null,"term":"GO:1990555"}]},"cv_name":"biological_process","definition":"The process in which oxaloacetate is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:10428783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxaloacetate(2-) transmembrane transport","termid":"GO:1902356"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"mitochondrial oxaloacetate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990555","terms_by_termid":{"GO:1990555":null}}


id: PBO:0111814
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human retinoblastoma binding protein 2-like family","termid":"PBO:0111814"}


id: GO:1903337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vacuolar transport.","definition_xrefs":["GO_REF:0000058","GOC:vw","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"is_a","term_name":"regulation of vacuolar transport","termid":"GO:1903335"},{"relation_name":"positively_regulates","term_name":"vacuolar transport","termid":"GO:0007034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of vacuolar transport","synonyms":[{"name":"activation of vacuolar transport","type":"narrow"},{"name":"up regulation of vacuolar transport","type":"exact"},{"name":"up-regulation of vacuolar transport","type":"exact"},{"name":"upregulation of vacuolar transport","type":"exact"}],"termid":"GO:1903337"}


id: GO:0032070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of deoxyribonuclease activity, the hydrolysis of ester linkages within deoxyribonucleic acid.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of deoxyribonuclease activity (obsolete GO:0032070)","synonyms":[{"name":"DNase regulator","type":"related"},{"name":"deoxyribonuclease regulator","type":"related"}],"termid":"GO:0032070"}


id: GO:0031555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A negative regulation of gene expression mechanism by which bacteria and archae can direct RNA polymerase to prematurely terminate transcription in response to a specific metabolic signal.","definition_xrefs":["PMID:12210530","PMID:15851059","PMID:7007895"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"is_a","term_name":"positive regulation of termination of DNA-templated transcription","termid":"GO:0060566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0006355","GO:0010467"],"is_obsolete":false,"name":"transcriptional attenuation","secondary_identifiers":["Wikipedia:Attenuator_(genetics)"],"termid":"GO:0031555"}


id: GO:0032931
data:
  {"annotated_genes":["SJAG_01204"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74321],"is_not":false,"summary":null,"term":"GO:0032931"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H3 L-lysine (position 56) = CoA + histone H3 N6-acetyl-L-lysine (position 56).","definition_xrefs":["PMID:19056256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 acetyltransferase activity","termid":"GO:0010484"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01204":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0140096","GO:0003824","GO:0034212","GO:0016746"],"is_obsolete":false,"name":"histone H3K56 acetyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"histone H3-K56 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H3-K56 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H3-K56 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H3-K56 specific)","type":"exact"}],"termid":"GO:0032931","terms_by_termid":{"GO:0032931":null}}


id: GO:1900566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of chanoclavine-I.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete chanoclavine-I biosynthetic process (obsolete GO:1900566)","synonyms":[{"name":"chanoclavine-I anabolism","type":"exact"},{"name":"chanoclavine-I biosynthesis","type":"exact"},{"name":"chanoclavine-I formation","type":"exact"},{"name":"chanoclavine-I synthesis","type":"exact"}],"termid":"GO:1900566"}


id: PR:P87319
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps1301 gene.","definition_xrefs":["UniProtKB:P87319","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 13a (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.01c","synonyms":[{"name":"Spom972h-vps1301","type":"exact"}],"termid":"PR:P87319"}


id: SO:0000082
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000082 processed_transcript_attribute (obsolete SO:0000082)","termid":"SO:0000082"}


id: PBO:0003944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Centaurin 5","termid":"PBO:0003944"}


id: MONDO:0015907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epimetaphyseal skeletal dysplasia","secondary_identifiers":["GARD:2176","Orphanet:1819"],"termid":"MONDO:0015907","xrefs":{"Monarch":{"xref_id":"0015907"}}}


id: GO:0016912
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete SAP kinase 5 activity (obsolete GO:0016912)","synonyms":[{"name":"SAP kinase 5 activity","type":"exact"},{"name":"SAPK5","type":"exact"}],"termid":"GO:0016912"}


id: PBO:0088639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Nop58","termid":"PBO:0088639"}


id: MONDO:0033200
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"hearing loss, autosomal recessive 108","secondary_identifiers":["GARD:22658","DOID:0080263","UMLS:C4539997","MEDGEN:1627841","OMIM:617654"],"synonyms":[{"name":"DFNB108","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 108","type":"narrow"},{"name":"deafness, autosomal recessive 108","type":"narrow"}],"termid":"MONDO:0033200","xrefs":{"Monarch":{"xref_id":"0033200"}}}


id: GO:0010059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that induces or promotes atrichoblast fate specification.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of atrichoblast fate specification","termid":"GO:0010058"},{"relation_name":"is_a","term_name":"positive regulation of cell fate specification","termid":"GO:0042660"},{"relation_name":"is_a","term_name":"positive regulation of plant epidermal cell differentiation","termid":"GO:1903890"},{"relation_name":"positively_regulates","term_name":"atrichoblast fate specification","termid":"GO:0010056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of atrichoblast fate specification","synonyms":[{"name":"activation of atrichoblast fate","type":"narrow"},{"name":"stimulation of atrichoblast fate","type":"narrow"},{"name":"up regulation of atrichoblast fate","type":"exact"},{"name":"up-regulation of atrichoblast fate","type":"exact"},{"name":"upregulation of atrichoblast fate","type":"exact"}],"termid":"GO:0010059"}


id: PBO:0086743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; possible role in iron metabolism and/or amino acid and carbohydrate metabolism; green fluorescent protein (GFP)-fusion protein localizes to the endoplasmic reticulum","termid":"PBO:0086743"}


id: GO:0060747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A parental behavior in which fertilized eggs are taken into the mouth and held until hatching.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parental behavior","termid":"GO:0060746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oral incubation","termid":"GO:0060747"}


id: MOD:01310
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a lysine N6-hydrogen with a quaternary amine reagent light form group.","definition_xrefs":["Unimod:60#K","PubMed:11857757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quaternary amine labeling reagent light form N6-L-lysine","synonyms":[{"name":"GIST-Quat","type":"related"},{"name":"Quaternary amine labeling reagent light form (N-term & K)","type":"related"}],"termid":"MOD:01310"}


id: MONDO:0008043
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by the association of myoclonus, cerebellar ataxia and sensorineural hearing loss.","definition_xrefs":["Orphanet:2589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary ataxia","termid":"MONDO:0100309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myoclonus-cerebellar ataxia-deafness syndrome","secondary_identifiers":["GARD:3873","OMIM:159800","MEDGEN:331780","MESH:C563549","UMLS:C1834579"],"synonyms":[{"name":"myoclonus cerebellar ataxia deafness","type":"related"},{"name":"myoclonus, cerebellar ataxia, and deafness","type":"related"}],"termid":"MONDO:0008043","xrefs":{"Monarch":{"xref_id":"0008043"}}}


id: PBO:0047297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acyl-CoA reductase 2 pseudogene 4","termid":"PBO:0047297"}


id: GO:0098510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to detect high environmental humidity, convert this detection into a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["PMID:18269908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of humidity","termid":"GO:0098509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of high humidity","termid":"GO:0098510"}


id: MONDO:0100318
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A viral disease or post-viral disorder caused by infection with severe acute respiratory syndrome coronavirus 2 or the associated aftereffects of the disease.","gene_count":0,"genotype_count":0,"name":"obsolete SARS-CoV-2-related disease (obsolete MONDO:0100318)","synonyms":[{"name":"COVID-19-related disease","type":"broad"}],"termid":"MONDO:0100318","xrefs":{"Monarch":{"xref_id":"0100318"}}}


id: PBO:0048433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosylceramidase beta pseudogene 1","termid":"PBO:0048433"}


id: FYPO:0002752
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing L-methionine as the sole sulfur source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002058","FYPO:0005447","FYPO:0000139","FYPO:0002060","FYPO:0002057"],"is_obsolete":false,"name":"abolished cell population growth on methionine sulfur source","synonyms":[{"name":"abolished cell population growth on methionine sulphur source","type":"exact"},{"name":"abolished growth on methionine sulfur source","type":"broad"},{"name":"abolished methionine utilization","type":"related"},{"name":"abolished vegetative cell population growth on methionine sulfur source","type":"exact"},{"name":"cell population growth on methionine sulfur source abolished","type":"exact"},{"name":"inability to utilize methionine as sole sulphur source","type":"related"}],"termid":"FYPO:0002752"}


id: PBO:0041972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC13 antisense RNA 2","termid":"PBO:0041972"}


id: PATO:0000105
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000105 p h sensitivity (obsolete PATO:0000105)","termid":"PATO:0000105"}


id: SO:0002298
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An operon whose transcription is coordinated on a single transcription unit.","definition_xrefs":["PMID:32665585","Bacterial_regulation_working_group:CMA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"operon","termid":"SO:0000178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"simple_operon","synonyms":[{"name":"simple operon","type":"exact"}],"termid":"SO:0002298"}


id: PATO:0000104
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000104 osmotic response sensitivity (obsolete PATO:0000104)","termid":"PATO:0000104"}


id: PBO:0040289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP1B3 antisense RNA 1","termid":"PBO:0040289"}


id: PBO:0079632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2Q2 pseudogene 2","termid":"PBO:0079632"}


id: FYPO:0001246
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to hydrogen peroxide is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal RNA level during cellular response to hydrogen peroxide","synonyms":[{"name":"normal RNA accumulation during cellular response to hydrogen peroxide","type":"related"},{"name":"normal RNA level during cellular response to H2O2","type":"exact"},{"name":"normal RNA level during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"normal mRNA level during cellular response to hydrogen peroxide","type":"narrow"},{"name":"normal transcript level during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0001246"}


id: MONDO:0005853
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm composed of a carcinomatous epithelial component and a sarcomatous mesenchymal component. Representative examples include malignant mixed mesodermal (Mullerian) tumor of the female reproductive system and carcinosarcoma of the salivary gland and the lung.","definition_xrefs":["NCIT:C3729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"mixed neoplasm","termid":"MONDO:0021043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant mixed neoplasm","secondary_identifiers":["ICDO:8940/3","MESH:D018198","UMLS:C0206625","MEDGEN:64618","DOID:154","EFO:1000356"],"synonyms":[{"name":"malignant mixed cancer","type":"exact"},{"name":"malignant mixed neoplasm","type":"exact"},{"name":"malignant mixed tumor","type":"exact"},{"name":"malignant mixed tumors","type":"related"},{"name":"malignant mixed tumour","type":"exact"},{"name":"malignant mixed tumours","type":"related"},{"name":"mixed cell type cancer","type":"broad"},{"name":"mixed neoplasm","type":"broad"},{"name":"mixed neoplasm, malignant","type":"exact"},{"name":"mixed tumor","type":"broad"},{"name":"mixed tumor, malignant","type":"exact"},{"name":"mixed tumor, malignant (morphologic abnormality)","type":"exact"},{"name":"mixed tumor, malignant, NOS (morphologic abnormality)","type":"exact"},{"name":"mixed tumors, malignant","type":"related"},{"name":"mixed tumour","type":"broad"},{"name":"tumor, malignant mixed","type":"related"},{"name":"tumor, mixed, malignant","type":"exact"},{"name":"tumors, malignant mixed","type":"related"}],"termid":"MONDO:0005853","xrefs":{"Monarch":{"xref_id":"0005853"}}}


id: GO:0009045
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-xylose = alpha-D-xylulofuranose.","definition_xrefs":["RHEA:22816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"xylose isomerase activity","secondary_identifiers":["EC:5.3.1.5","MetaCyc:XYLISOM-RXN"],"synonyms":[{"name":"D-xylose aldose-ketose-isomerase activity","type":"related"},{"name":"D-xylose isomerase activity","type":"related"},{"name":"D-xylose ketoisomerase activity","type":"related"},{"name":"D-xylose ketol-isomerase activity","type":"related"}],"termid":"GO:0009045"}


id: GO:0047401
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + trithionate = H+ + sulfate + thiosulfate.","definition_xrefs":["RHEA:21884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid sulfur-sulfur bonds","termid":"GO:0016828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"trithionate hydrolase activity","secondary_identifiers":["KEGG_REACTION:R01930","EC:3.12.1.1","MetaCyc:3.12.1.1-RXN"],"synonyms":[{"name":"trithionate thiosulfohydrolase activity","type":"related"}],"termid":"GO:0047401"}


id: GO:0120219
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a polarized cell that is just below the apical region. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue so the subapical region is further from the exposed surface and closer to the basal lamina.","definition_xrefs":["GOC:krc","PMID:29891944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"subapical part of cell","synonyms":[{"name":"subapical region of cell","type":"exact"}],"termid":"GO:0120219"}


id: MONDO:0021042
data:
  {"annotated_genes":["SJAG_04213","SJAG_01111"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89126,89127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024517"}]},"cv_name":"mondo","definition":"A benign or malignant brain and spinal cord tumor that arises from glial cells (astrocytes, oligodendrocytes, ependymal cells). Tumors that arise from astrocytes are called astrocytic tumors or astrocytomas. Tumors that arise from oligodendrocytes are called oligodendroglial tumors. Tumors that arise from ependymal cells are called ependymomas.","definition_xrefs":["NCIT:C3059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroepithelial neoplasm","termid":"MONDO:0021193"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01111":null,"SJAG_04213":null},"genotype_count":0,"is_obsolete":false,"name":"glioma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:6513","MESH:D005910","SCTID:393564001","UMLS:C0017638","EFO:0005543","Orphanet:182067","MEDGEN:9030"],"synonyms":[{"name":"glial neoplasm","type":"exact"},{"name":"glial tumor","type":"exact"},{"name":"glial tumour","type":"exact"},{"name":"glioma","type":"exact"},{"name":"neoplasm of neuroglia","type":"exact"},{"name":"neoplasm of the neuroglia","type":"exact"},{"name":"neuroglial neoplasm","type":"exact"},{"name":"neuroglial tumor","type":"exact"},{"name":"neuroglial tumour","type":"exact"},{"name":"tumor of neuroglia","type":"exact"},{"name":"tumor of the neuroglia","type":"exact"},{"name":"tumour of neuroglia","type":"exact"},{"name":"tumour of the neuroglia","type":"exact"}],"termid":"MONDO:0021042","terms_by_termid":{"MONDO:0024517":null},"xrefs":{"Monarch":{"xref_id":"0021042"}}}


id: GO:0018568
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3,4-dihydroxyphenanthrene + O2 = H+ + 2-hydroxy-2 H-benzo[h]chromene-2-carboxylate.","definition_xrefs":["UM-BBD_reactionID:r0501"],"gene_count":0,"genotype_count":0,"name":"obsolete 3,4-dihydroxyphenanthrene dioxygenase activity (obsolete GO:0018568)","termid":"GO:0018568"}


id: PBO:0070240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 180 pseudogene","termid":"PBO:0070240"}


id: MONDO:1011604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 2 diabetes mellitus that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes mellitus, domestic cat","termid":"MONDO:1010575"},{"relation_name":"is_a","term_name":"type 2 diabetes mellitus, non-human animal","termid":"MONDO:1011402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 2 diabetes mellitus, domestic cat","secondary_identifiers":["OMIA:000284-9685"],"termid":"MONDO:1011604","xrefs":{"Monarch":{"xref_id":"1011604"}}}


id: PBO:0005136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNAJ domain protein Mdj1 (predicted)","termid":"PBO:0005136"}


id: MONDO:0002287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A reactive inflammatory disorder affecting the bladder. It is characterized by the development of small cysts in the bladder wall. The cysts are lined by metaplastic glandular cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic cystitis","termid":"MONDO:0006030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glandular cystitis","secondary_identifiers":["DOID:2392","NCIT:C39860","MEDGEN:82830","SCTID:72815004","UMLS:C0268837","ICD9:595.89"],"synonyms":[{"name":"cystitis glandularis","type":"related"}],"termid":"MONDO:0002287","xrefs":{"Monarch":{"xref_id":"0002287"}}}


id: GO:1904836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process by which an acoustico-facial VII-VIII ganglion complex is generated and organized.","definition_xrefs":["GOC:mat","PMID:18356247","GOC:TermGenie","GOC:PARL","GOC:bf","GO_REF:0000083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial ganglion morphogenesis","termid":"GO:0061559"},{"relation_name":"part_of","term_name":"facioacoustic ganglion development","termid":"GO:1903375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"facioacoustic ganglion morphogenesis","synonyms":[{"name":"acoustico-facial VII-VIII ganglion complex morphogenesis","type":"exact"},{"name":"acousticofacial ganglion morphogenesis","type":"exact"},{"name":"facio-acoustic VII-VIII ganglion complex morphogenesis","type":"related"},{"name":"facio-acoustic ganglion complex VII-VIII morphogenesis","type":"exact"},{"name":"facio-acoustic ganglion complex morphogenesis","type":"related"},{"name":"facio-acoustic ganglion morphogenesis","type":"exact"}],"termid":"GO:1904836"}


id: FYPO:0004089
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of meiotic recombination is decreased during a zygotic meiotic nuclear division. Zygotic meiosis takes place immediately after conjugation and karyogamy, without intervening vegetative growth and division of diploid cells.","definition_xrefs":["PMID:11907273","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased meiotic recombination","termid":"FYPO:0000485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000293","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"decreased meiotic recombination during zygotic meiosis","synonyms":[{"name":"decreased meiotic recombination in zygotic nucleus","type":"exact"},{"name":"reduced meiotic recombination during zygotic meiosis","type":"exact"}],"termid":"FYPO:0004089"}


id: PBO:0116197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mad2 receptor at unattached kinetochores, Mad1","termid":"PBO:0116197"}


id: PBO:0110563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eIF-5A-deoxyhypusine hydroxylase","termid":"PBO:0110563"}


id: GO:0033632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of cell-cell adhesion mediated by integrin.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion","termid":"GO:0022407"},{"relation_name":"is_a","term_name":"regulation of cell adhesion mediated by integrin","termid":"GO:0033628"},{"relation_name":"regulates","term_name":"cell-cell adhesion mediated by integrin","termid":"GO:0033631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of cell-cell adhesion mediated by integrin","synonyms":[{"name":"regulation of cell-cell adhesion mediated by integrin complex","type":"exact"}],"termid":"GO:0033632"}


id: PBO:0053368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 280","termid":"PBO:0053368"}


id: MONDO:0031045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis, distal, IIa 11","secondary_identifiers":["MEDGEN:1823978","UMLS:C5774205","OMIM:620019"],"synonyms":[{"name":"DA11","type":"exact"},{"name":"arthrogryposis, distal, IIa 11","type":"exact"}],"termid":"MONDO:0031045","xrefs":{"Monarch":{"xref_id":"0031045"}}}


id: PBO:0087146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding subunit of the TRAMP nuclear RNA surveillance complex; involved in nuclear RNA processing and degradation; involved in TRAMP complex assembly as a bridge between Mtr4p and Trf4p; stimulates the poly(A) polymerase activity of Pap2p in vitro; has 5 zinc knuckle motifs; AIR2 has a paralog, AIR1, that arose from the whole genome duplication; Air2p and Air1p have nonredundant roles in regulation of substrate specificity of the exosome","termid":"PBO:0087146"}


id: PBO:0058107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4322","termid":"PBO:0058107"}


id: GO:0006556
data:
  {"annotated_genes":["SJAG_03659"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76748],"is_not":false,"summary":null,"term":"GO:0006556"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of S-adenosylmethionine, S-(5'-adenosyl)-L-methionine, an important intermediate in one-carbon metabolism.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"S-adenosylmethionine metabolic process","termid":"GO:0046500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03659":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"S-adenosylmethionine biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:SAM-PWY"],"synonyms":[{"name":"S-adenosyl methionine biosynthesis","type":"exact"},{"name":"S-adenosyl methionine biosynthetic process","type":"exact"},{"name":"S-adenosylmethionine anabolism","type":"exact"},{"name":"S-adenosylmethionine biosynthesis","type":"exact"},{"name":"S-adenosylmethionine formation","type":"exact"},{"name":"S-adenosylmethionine synthesis","type":"exact"},{"name":"SAM biosynthetic process","type":"exact"}],"termid":"GO:0006556","terms_by_termid":{"GO:0006556":null}}


id: GO:0018624
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADH + O2 + toluene = (1S,2R)-3-methylcyclohexa-3,5-diene-1,2-diol + NAD+.","definition_xrefs":["EC:1.14.12.11","RHEA:16737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"toluene dioxygenase activity","secondary_identifiers":["MetaCyc:TOLUENE-DIOXYGENASE-RXN","KEGG_REACTION:R03559","UM-BBD_enzymeID:r0253"],"synonyms":[{"name":"toluene 1,2-dioxygenase activity","type":"related"},{"name":"toluene 2,3-dioxygenase activity","type":"related"},{"name":"toluene,NADH:oxygen oxidoreductase (1,2-hydroxylating)","type":"related"}],"termid":"GO:0018624"}


id: PBO:0054301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1692","termid":"PBO:0054301"}


id: PBO:0052931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 20-3","termid":"PBO:0052931"}


id: PBO:0065496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMG3 pseudogene 1","termid":"PBO:0065496"}


id: MONDO:0037938
data:
  {"annotated_genes":["SJAG_03556","SJAG_01070","SJAG_02388","SJAG_01061"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100255"},{"annotations":[87229,87228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009388"},{"annotations":[88715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013404"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of aspartate family amino acid metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"},{"relation_name":"is_a","term_name":"disorder of organic acid metabolism","termid":"MONDO:0045022"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01061":null,"SJAG_01070":null,"SJAG_02388":null,"SJAG_03556":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of aspartate family metabolism","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"inborn aspartate family amino acid metabolic process disorder","type":"exact"},{"name":"inborn error of aspartate family amino acid metabolic process","type":"exact"},{"name":"rare inborn error of aspartate family amino acid metabolic process","type":"exact"}],"termid":"MONDO:0037938","terms_by_termid":{"MONDO:0009388":null,"MONDO:0013404":null,"MONDO:0100255":null},"xrefs":{"Monarch":{"xref_id":"0037938"}}}


id: GO:0047999
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 hydroxylamine + 2 NAD+ = 2 H+ + hyponitrous acid + 2 NADH.","definition_xrefs":["RHEA:19337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor","termid":"GO:0046857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"hyponitrite reductase (NADH) activity","secondary_identifiers":["KEGG_REACTION:R00023","MetaCyc:HYPONITRITE-REDUCTASE-RXN","EC:1.7.1.5"],"synonyms":[{"name":"NADH2:hyponitrite oxidoreductase activity","type":"related"},{"name":"NADH:hyponitrite oxidoreductase activity","type":"related"},{"name":"hydroxylamine:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0047999"}


id: GO:0045244
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric enzyme complex, usually composed of an alpha and beta chain. Functions in the TCA cycle, hydrolyzing succinyl-CoA into succinate and CoA, thereby forming GTP.","definition_xrefs":["PMID:27487822","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinate-CoA ligase complex","termid":"GO:0042709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"succinate-CoA ligase complex (GDP-forming)","secondary_identifiers":["GO:0008325","GO:0045245"],"synonyms":[{"name":"succinyl-CoA synthetase, GDP-forming","type":"exact"}],"termid":"GO:0045244"}


id: PBO:0004040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDP-diacylglycerol-glycerol-3-phosphate3-phosphatidyltransferase(predicted)","termid":"PBO:0004040"}


id: FYPO:0007371
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a cell population in the vegetative growth phase of the life cycle grows at a faster rate than normal in a medium containing sucrose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell population growth rate","termid":"FYPO:0000636"},{"relation_name":"is_a","term_name":"increased cell population growth on sucrose carbon source","termid":"FYPO:0009076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0002057","FYPO:0002058"],"is_obsolete":false,"name":"increased cell population growth rate on sucrose carbon source","synonyms":[{"name":"enhanced growth on sucrose","type":"related"},{"name":"fast cell population growth on sucrose carbon source","type":"exact"},{"name":"increased cell population proliferation on sucrose carbon source","type":"related"},{"name":"increased cell proliferation on sucrose carbon source","type":"related"},{"name":"increased vegetative cell population growth rate on sucrose carbon source","type":"exact"}],"termid":"FYPO:0007371"}


id: MONDO:0958200
data:
  {"annotated_genes":["SJAG_04022","SJAG_01412"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87816,87817],"is_not":false,"summary":null,"term":"MONDO:0958200"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01412":null,"SJAG_04022":null},"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder, X-linked 113","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5882666","MEDGEN:1852264","OMIM:301116"],"termid":"MONDO:0958200","terms_by_termid":{"MONDO:0958200":null},"xrefs":{"Monarch":{"xref_id":"0958200"}}}


id: GO:0106263
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction:a 1-acyl-sn-glycero-3-phospho-L-serine + an acyl-CoA = a 1,2-diacyl-sn-glycero-3-phospho-L-serine + CoA.","definition_xrefs":["RHEA:33191","PMID:18287005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"1-acylglycerophosphoserine O-acyltransferase activity","secondary_identifiers":["EC:2.3.1.n6"],"termid":"GO:0106263"}


id: PBO:0049800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex P5B","termid":"PBO:0049800"}


id: MONDO:0017173
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Non-syndromic male infertility due to sperm motility disorder is a rare, genetic, non-syndromic male infertility disorder characterized by infertility due to sperm with defects in their cilia/flagella structure, leading to absent motility or reduced forward motility in fresh ejaculate. Reduced semen volume, oligospermia and an increased number of abnormally structured spermatozoa is often present.","definition_xrefs":["Orphanet:276234"],"gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic male infertility due to sperm motility disorder (obsolete MONDO:0017173)","synonyms":[{"name":"isolated male infertility due to sperm motility disorder","type":"exact"},{"name":"non-syndromic male infertility due asthenozoospermia","type":"exact"},{"name":"nonsyndromic male infertility due to sperm motility disorder","type":"exact"}],"termid":"MONDO:0017173","xrefs":{"Monarch":{"xref_id":"0017173"}}}


id: PBO:0081114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFAND3 divergent transcript","termid":"PBO:0081114"}


id: PR:O94439
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fsc1 gene.","definition_xrefs":["UniProtKB:O94439","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAS1 domain-containing protein fsc1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H12.05c","synonyms":[{"name":"Spom972h-fsc1","type":"exact"}],"termid":"PR:O94439"}


id: MONDO:0019462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Splenic marginal zone lymphoma is a rare, indolent B-cell non-Hodgkin lymphoma characterized by abnormal clonal proliferation of mature B-lymphocytes with involvement in the spleen, bone marrow and, frequently, the blood. It usually presents with splenomegaly, lymphocytosis, anemia and/or thrombocytopenia. Hepatitis C virus and autoimmune manifestations, such as autoimmune hemolytic anemia and autoimmune thrombocytopenia, could be associated.","definition_xrefs":["Orphanet:86854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"marginal zone lymphoma","termid":"MONDO:0017604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"splenic marginal zone lymphoma","secondary_identifiers":["NCIT:C4663","SCTID:763666008","icd11.foundation:1002343712","GARD:19072","MedDRA:10062113","UMLS:C0349632","EFO:1000550","ONCOTREE:SMZL","MEDGEN:138108","DOID:0050750","ICDO:9689/3"],"synonyms":[{"name":"SLVL","type":"exact"},{"name":"SMZL","type":"exact"},{"name":"marginal zone lymphoma of spleen","type":"exact"},{"name":"marginal zone lymphoma of the spleen","type":"exact"},{"name":"splenic lymphoma with circulating villous lymphocytes","type":"exact"},{"name":"splenic marginal zone B-cell lymphoma","type":"exact"},{"name":"splenic marginal zone B-cell lymphoma with villous lymphocytes","type":"exact"},{"name":"splenic marginal zone lymphoma","type":"exact"},{"name":"splenic marginal zone lymphoma with villous lymphocytes","type":"exact"}],"termid":"MONDO:0019462","xrefs":{"Monarch":{"xref_id":"0019462"}}}


id: PBO:0000071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA helicase in rearranged telomeric region, truncated","termid":"PBO:0000071"}


id: PBO:0049789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 24","termid":"PBO:0049789"}


id: PBO:0109384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 15","termid":"PBO:0109384"}


id: PBO:0050895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IER5L antisense RNA 1","termid":"PBO:0050895"}


id: MONDO:0003058
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A WHO grade I meningioma characterized by the presence of intercellular microcystic spaces that contain mucinous fluid.","definition_xrefs":["NCIT:C4721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcystic meningioma","secondary_identifiers":["DOID:4594","MEDGEN:234616","UMLS:C1384408"],"synonyms":[{"name":"microcystic meningioma","type":"exact"},{"name":"microcystic meningioma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003058","xrefs":{"Monarch":{"xref_id":"0003058"}}}


id: PBO:0069523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 792, pseudogene","termid":"PBO:0069523"}


id: PBO:0062795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ORMDL sphingolipid biosynthesis regulator 1","termid":"PBO:0062795"}


id: PBO:0036385
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by Bulleromyces albus DPS1","termid":"PBO:0036385"}


id: GO:0052179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving pectin in the cell wall of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by symbiont of host cell wall pectin (obsolete GO:0052179)","synonyms":[{"name":"metabolism by organism of cell wall pectin in other organism involved in symbiotic interaction","type":"narrow"}],"termid":"GO:0052179"}


id: GO:0006886
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id: FYPO:0007651
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to pericentric heterochromatin is abolished during mitosis.","definition_xrefs":["PomBase:mah","PMID:14730319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle process","termid":"FYPO:0002737"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal protein localization to pericentric heterochromatin","termid":"FYPO:0007648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000631","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to pericentric heterochromatin during mitosis","synonyms":[{"name":"abolished protein localization to centromeric heterochromatin during mitosis","type":"exact"},{"name":"abolished protein localization to nuclear centromeric heterochromatin during mitosis","type":"exact"},{"name":"abolished protein localization to pericentric heterochromatin during mitosis during vegetative growth","type":"exact"},{"name":"abolished protein localization to pericentric heterochromatin during mitotic M phase","type":"related"},{"name":"abolished protein localization to pericentric heterochromatin during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0007651"}


id: MONDO:1010328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinoschisis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal degeneration, non-human animal","termid":"MONDO:1010326"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoschisis, non-human animal","secondary_identifiers":["OMIA:001185"],"termid":"MONDO:1010328","xrefs":{"Monarch":{"xref_id":"1010328"}}}


id: GO:0036507
data:
  {"annotated_genes":["SJAG_01858"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904380"}]},"cv_name":"biological_process","definition":"The removal of one or more mannose residues from a mannosylated protein.","definition_xrefs":["GOC:PARL","GOC:bf","PMID:25092655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deglycosylation","termid":"GO:0006517"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01858":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein demannosylation","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"protein de-mannosylation","type":"exact"}],"termid":"GO:0036507","terms_by_termid":{"GO:1904380":null}}


id: GO:0033152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immunoglobulin gene segments are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS). For immunoglobulin heavy chains V, D, and J gene segments are joined, and for immunoglobulin light chains V and J gene segments are joined.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic recombination of immunoglobulin gene segments","termid":"GO:0016447"},{"relation_name":"is_a","term_name":"V(D)J recombination","termid":"GO:0033151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0010467","GO:0006259"],"is_obsolete":false,"name":"immunoglobulin V(D)J recombination","synonyms":[{"name":"immunoglobulin V(D)J joining","type":"exact"},{"name":"immunoglobulin V-D-J joining","type":"narrow"},{"name":"immunoglobulin V-D-J recombination","type":"narrow"},{"name":"immunoglobulin V-J joining","type":"narrow"},{"name":"immunoglobulin V-J recombination","type":"narrow"}],"termid":"GO:0033152"}


id: GO:1905060
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any calcium:cation antiporter activity that is involved in regulation of postsynaptic cytosolic calcium ion concentration.","definition_xrefs":["GOC:TermGenie","PMID:18024055","GO_REF:0000061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium:monoatomic cation antiporter activity","termid":"GO:0015368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"calcium:monoatomic cation antiporter activity involved in regulation of postsynaptic cytosolic calcium ion concentration","synonyms":[{"name":"calcium:cation antiporter activity involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"broad"},{"name":"calcium:cation antiporter activity involved in regulation of postsynaptic cytosolic calcium ion levels","type":"exact"}],"termid":"GO:1905060"}


id: PBO:0086777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum; identified based on homology to <i>Ashbya gossypii</i>","termid":"PBO:0086777"}


id: PBO:0053440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 385","termid":"PBO:0053440"}


id: PBO:0034075
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ribosomally_translates_to","termid":"PBO:0034075"}


id: PBO:0005778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle subunit Sec65 (predicted)","termid":"PBO:0005778"}


id: FYPO:0001747
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of nickel ions into a cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal nickel import","synonyms":[{"name":"abnormal cellular nickel import","type":"exact"},{"name":"abnormal nickel cation import","type":"exact"},{"name":"abnormal nickel import across plasma membrane","type":"exact"},{"name":"abnormal nickel import during mitotic cell cycle","type":"related"},{"name":"abnormal nickel import during vegetative growth","type":"exact"},{"name":"abnormal nickel import into cell","type":"exact"},{"name":"abnormal nickel ion import","type":"exact"}],"termid":"FYPO:0001747"}


id: PBO:0090801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein Spo14","termid":"PBO:0090801"}


id: GO:1990832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed slow movement of non-membranous molecules in nerve cell axons. It is comprised of a Slow Component a (SCa) and a Slow Component b (SCb) which differ in transport rates and protein composition.","definition_xrefs":["PMID:6378920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axo-dendritic transport","termid":"GO:0008088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"slow axonal transport","termid":"GO:1990832"}


id: MOD:02010
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino group with a stearoylamino group.","direct_ancestors":[{"relation_name":"is_a","term_name":"N-acylated residue","termid":"MOD:00670"},{"relation_name":"is_a","term_name":"stearoylated residue","termid":"MOD:02001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"N-stearoylated residue","termid":"MOD:02010"}


id: GO:0062094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the stomach over time, from its formation to the mature structure. The stomach is an expanded region of the vertebrate alimentary tract that serves as a food storage compartment and digestive organ.","definition_xrefs":["PMID:11967278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"digestive tract development","termid":"GO:0048565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stomach development","termid":"GO:0062094"}


id: PBO:0051080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy constant epsilon","termid":"PBO:0051080"}


id: PBO:0060074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 21","termid":"PBO:0060074"}


id: GO:0045133
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,3-dihydroxybenzoate + O2 = 2-hydroxy-3-(3-oxoprop-1-enyl)but-2-enedioate + H+.","definition_xrefs":["EC:1.13.11.14","RHEA:18477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2,3-dihydroxybenzoate 3,4-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R01507","MetaCyc:1.13.11.14-RXN"],"synonyms":[{"name":"2,3-dihydroxybenzoate 1,2-dioxygenase activity","type":"related"},{"name":"2,3-dihydroxybenzoate oxygenase activity","type":"related"},{"name":"2,3-dihydroxybenzoate:oxygen 3,4-oxidoreductase (decyclizing)","type":"related"},{"name":"2,3-dihydroxybenzoic oxygenase activity","type":"related"},{"name":"o-pyrocatechuate oxygenase activity","type":"related"}],"termid":"GO:0045133"}


id: PBO:0079730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBTF like 7 (pseudogene)","termid":"PBO:0079730"}


id: SO:0000048
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"To substitute a subsection of sequence for another.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000048 substitute (obsolete SO:0000048)","termid":"SO:0000048"}


id: GO:0009253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of peptidoglycans, any of a class of glycoconjugates found in bacterial cell walls and consisting of long glycan strands of alternating residues of beta-(1,4) linked N-acetylglucosamine and N-acetylmuramic acid, cross-linked by short peptides.","definition_xrefs":["PMID:9158729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidoglycan metabolic process","termid":"GO:0000270"},{"relation_name":"is_a","term_name":"glycosaminoglycan catabolic process","termid":"GO:0006027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidoglycan catabolic process","secondary_identifiers":["GO:0009286"],"synonyms":[{"name":"murein catabolic process","type":"exact"},{"name":"murein catabolism","type":"exact"},{"name":"peptidoglycan breakdown","type":"exact"},{"name":"peptidoglycan catabolism","type":"exact"},{"name":"peptidoglycan degradation","type":"exact"}],"termid":"GO:0009253"}


id: PBO:0073498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small G protein signaling modulator 3","termid":"PBO:0073498"}


id: GO:0050735
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a malonyl group to a nitrogen atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"},{"relation_name":"is_a","term_name":"malonyltransferase activity","termid":"GO:0016420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"N-malonyltransferase activity","termid":"GO:0050735"}


id: PBO:0047276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FA complementation group C","termid":"PBO:0047276"}


id: PBO:0042763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 57","termid":"PBO:0042763"}


id: GO:0010292
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP(out) + GDP(in) = GTP(in) + GDP(out).","definition_xrefs":["PMID:12553910","PMID:16553903","PMID:10514379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanine nucleotide transmembrane transporter activity","termid":"GO:0001409"},{"relation_name":"is_a","term_name":"purine ribonucleotide transmembrane transporter activity","termid":"GO:0005346"},{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"GTP:GDP antiporter activity","termid":"GO:0010292"}


id: PBO:0001632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine-1-phosphate phosphatase (predicted)","termid":"PBO:0001632"}


id: MONDO:0020523
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of parathyroid gland adenoma that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"parathyroid gland adenoma","termid":"MONDO:0006890"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial parathyroid adenoma","secondary_identifiers":["MEDGEN:374460","icd11.foundation:55934726","Orphanet:99877","UMLS:C1840403"],"synonyms":[{"name":"hereditary parathyroid gland adenoma","type":"exact"}],"termid":"MONDO:0020523","xrefs":{"Monarch":{"xref_id":"0020523"}}}


id: MONDO:1010953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Schwannomatosis that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bovine neoplasm","termid":"MONDO:0700134"},{"relation_name":"is_a","term_name":"schwannomatosis, non-human animal","termid":"MONDO:1010217"},{"relation_name":"is_a","term_name":"neurofibromatosis, cattle","termid":"MONDO:1011566"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schwannomatosis, cattle","secondary_identifiers":["OMIA:001963-9913"],"termid":"MONDO:1010953","xrefs":{"Monarch":{"xref_id":"1010953"}}}


id: PBO:0077518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 233","termid":"PBO:0077518"}


id: PBO:0040097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosyltransferase 3 (inactive)","termid":"PBO:0040097"}


id: PBO:0084871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; has similarity to mammalian apoptosis mediator proteins; null mutation prevents induction of apoptosis by overproduction of metacaspase Mca1p","termid":"PBO:0084871"}


id: MONDO:1011316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disorder of visual system that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disorder of visual system, non-human animal","termid":"MONDO:1011316","xrefs":{"Monarch":{"xref_id":"1011316"}}}


id: FYPO:0006161
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to chromatin is abolished during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to chromatin","termid":"FYPO:0001678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to chromatin during meiosis I","synonyms":[{"name":"abolished protein localisation to chromatin during meiosis I","type":"exact"},{"name":"abolished protein localization to chromatin during first meiotic nuclear division","type":"exact"},{"name":"protein localization to chromatin during meiosis I replication abolished","type":"exact"}],"termid":"FYPO:0006161"}


id: PBO:0003988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome-c reductase complex subunit 5","termid":"PBO:0003988"}


id: PBO:0074886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 63B","termid":"PBO:0074886"}


id: PBO:0063715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PGM5P3 antisense RNA 1","termid":"PBO:0063715"}


id: PBO:0064579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member B","termid":"PBO:0064579"}


id: MONDO:0003479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pneumonia that is an acute inflammation of the lungs induced by inhalation of metal fumes or toxic gasses and vapors. It is a sentinel health event (occupational) associated with exposure to ammonia (refrigeration, fertilizer, and oil refining industries), chlorine (alkali and bleach industries), nitrogen oxides (silo fillers, arc welders, and nitric acid industry), sulfur dioxide (paper, refrigeration, and oil refining industries), cadmium (processors and cadmium smelters), trimellitic anhydride (plastics and organic chemical synthesis), and vanadium pentoxide (boilermakers). The two types of pulmonary agents are central and peripheral. Central pulmonary agents, for example, ammonia, are water soluble irritants that injure the upper airways. Peripheral pulmonary agents, for example, phosgene, NOx, and PFIB, are slightly water soluble irritants that injure the alveolar-capillary membranes. Chlorine has both central and peripheral effects.","definition_xrefs":["DOID:551"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pneumonia","termid":"MONDO:0005249"},{"relation_name":"is_a","term_name":"pneumonitis","termid":"MONDO:0043905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toxic pneumonitis","secondary_identifiers":["SCTID:233733000","MEDGEN:811389","ICD9:506.9","UMLS:C3714582"],"synonyms":[{"name":"acute chemical fume pulmonary edema","type":"exact"},{"name":"acute chemical fume pulmonary oedema","type":"exact"},{"name":"acute chemical pulmonary edema","type":"exact"},{"name":"acute chemical pulmonary oedema","type":"exact"}],"termid":"MONDO:0003479","xrefs":{"Monarch":{"xref_id":"0003479"}}}


