# terms

id: GO:0032872
data:
  {"annotated_genes":["SJAG_04666","SJAG_03969","SJAG_00610","SJAG_00424","SJAG_04522","SJAG_05000","SJAG_02392","SJAG_01787","SJAG_03705","SJAG_01114","SJAG_04825","SJAG_03263"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101252,108877,120194,109445,105619,97666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"},{"annotations":[94230,89898,69407,91252,92580,119768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903139"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signal transduction mediated by the stress-activated MAPK cascade.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of MAPK cascade","termid":"GO:0043408"},{"relation_name":"is_a","term_name":"regulation of stress-activated protein kinase signaling cascade","termid":"GO:0070302"},{"relation_name":"regulates","term_name":"stress-activated MAPK cascade","termid":"GO:0051403"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_01114":null,"SJAG_01787":null,"SJAG_02392":null,"SJAG_03263":null,"SJAG_03705":null,"SJAG_03969":null,"SJAG_04522":null,"SJAG_04666":null,"SJAG_04825":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of stress-activated MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"regulation of p38 MAPK signaling","type":"exact"},{"name":"regulation of p38 MAPK signalling","type":"exact"},{"name":"regulation of stress-activated MAPK signaling pathway","type":"exact"},{"name":"regulation of stress-activated MAPK signalling pathway","type":"exact"},{"name":"regulation of stress-activated MAPKKK cascade","type":"exact"},{"name":"regulation of stress-activated MAPKKK signaling pathway","type":"exact"},{"name":"regulation of stress-activated MAPKKK signalling pathway","type":"exact"}],"termid":"GO:0032872","terms_by_termid":{"GO:1903138":null,"GO:1903139":null}}


id: MONDO:0019142
data:
  {"annotated_genes":["SJAG_02876","SJAG_04944","SJAG_01372","SJAG_03961","SJAG_01841","SJAG_04109","SJAG_05283","SJAG_02896"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008294"},{"annotations":[87243],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009902"},{"annotations":[87499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008296"},{"annotations":[87198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030048"},{"annotations":[87652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007369"},{"annotations":[87244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013000"},{"annotations":[86935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008319"},{"annotations":[87518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008297"},{"annotations":[88170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957577"},{"annotations":[88514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010420"}]},"cv_name":"mondo","definition":"Porphyrias constitute a group of eight hereditary metabolic diseases characterized by intermittent neuro-visceral manifestations, cutaneous lesions or by the combination of both.","definition_xrefs":["Orphanet:738"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"hereditary photodermatosis","termid":"MONDO:0015951"},{"relation_name":"is_a","term_name":"inborn disorder of porphyrin metabolism","termid":"MONDO:0017754"},{"relation_name":"is_a","term_name":"porphyria","termid":"MONDO:0037939"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01372":null,"SJAG_01841":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04944":null,"SJAG_05283":null},"genotype_count":0,"in_subsets":["pombe_mondo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"inherited porphyria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:698423","UMLS:C1275125","MESH:D011164","DOID:13268","NANDO:2200610","NCIT:C97096","SCTID:371628009","ICD9:277.1","MedDRA:10061356","SCTID:418470004","GARD:10353","MedDRA:10036181"],"synonyms":[{"name":"Hematoporphyria","type":"related"},{"name":"Porphyrinopathy","type":"related"},{"name":"disorder of porphyrin and hem metabolism","type":"exact"},{"name":"disorder of porphyrin and heme metabolism","type":"broad"},{"name":"disorder of porphyrin metabolism","type":"broad"},{"name":"hereditary porphyria","type":"exact"},{"name":"porphyria","type":"broad"}],"termid":"MONDO:0019142","terms_by_termid":{"MONDO:0007369":null,"MONDO:0008294":null,"MONDO:0008296":null,"MONDO:0008297":null,"MONDO:0008319":null,"MONDO:0009902":null,"MONDO:0010420":null,"MONDO:0013000":null,"MONDO:0030048":null,"MONDO:0957577":null},"xrefs":{"Monarch":{"xref_id":"0019142"}}}


id: MONDO:0005454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A low, intermediate, or high grade malignant neoplasm with neuroendocrine differentiation that arises from the lung. This category includes typical carcinoid tumor, atypical carcinoid tumor, small cell carcinoma, large cell neuroendocrine carcinoma, and combined carcinoma.","definition_xrefs":["NCIT:C5670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroendocrine neoplasm","termid":"MONDO:0019496"},{"relation_name":"is_a","term_name":"lung neoplasm","termid":"MONDO:0021117"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lung neuroendocrine neoplasm","secondary_identifiers":["SCTID:707594002","ICD9:209.61","EFO:0005220","ONCOTREE:LNET","UMLS:C1334452","DOID:5410","MEDGEN:277303"],"synonyms":[{"name":"lung NET","type":"exact"},{"name":"lung neuroendocrine neoplasm","type":"exact"},{"name":"lung neuroendocrine tumor","type":"exact"},{"name":"lung neuroendocrine tumor, well differentiated, low or intermediate grade","type":"exact"},{"name":"lung neuroendocrine tumour","type":"exact"},{"name":"neuroendocrine neoplasm of lung","type":"exact"},{"name":"neuroendocrine neoplasm of the lung","type":"exact"},{"name":"pulmonary neuroendocrine neoplasm","type":"exact"},{"name":"pulmonary neuroendocrine tumor","type":"related"},{"name":"pulmonary neuroendocrine tumour","type":"related"}],"termid":"MONDO:0005454","xrefs":{"Monarch":{"xref_id":"0005454"}}}


id: PBO:0056664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 28 pseudogene 2","termid":"PBO:0056664"}


id: GO:1905021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of threonine-tRNA ligase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:8049265"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of threonine-tRNA ligase activity (obsolete GO:1905021)","synonyms":[{"name":"regulation of L-threonine:tRNAThr ligase (AMP-forming)","type":"exact"},{"name":"regulation of TRS","type":"related"},{"name":"regulation of threonine translase activity","type":"exact"},{"name":"regulation of threonine-transfer ribonucleate synthetase activity","type":"exact"},{"name":"regulation of threonyl ribonucleic synthetase activity","type":"exact"},{"name":"regulation of threonyl-tRNA synthetase activity","type":"exact"},{"name":"regulation of threonyl-transfer RNA synthetase activity","type":"exact"},{"name":"regulation of threonyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"regulation of threonyl-transfer ribonucleic acid synthetase activity","type":"exact"}],"termid":"GO:1905021"}


id: GO:0097223
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a sperm, a mature male germ cell that develops from a spermatid.","definition_xrefs":["GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete sperm part (obsolete GO:0097223)","termid":"GO:0097223"}


id: PBO:0042002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC54 antisense RNA 1","termid":"PBO:0042002"}


id: MONDO:0003857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A solitary fibrous tumor/hemangiopericytoma, grade 3 that arises from the brain and occurs in the adult population.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete connective tissue cancer (obsolete MONDO:0002176)","termid":"MONDO:0002176"},{"relation_name":"is_a","term_name":"hemangiopericytoma","termid":"MONDO:0005094"},{"relation_name":"is_a","term_name":"malignant central nervous system mesenchymal, non-meningothelial neoplasm","termid":"MONDO:0037740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult intracranial malignant hemangiopericytoma","secondary_identifiers":["NCIT:C9183","MEDGEN:235288","DOID:6333","UMLS:C1334558"],"synonyms":[{"name":"adult intracranial anaplastic hemangiopericytoma","type":"exact"},{"name":"adult intracranial solitary fibrous tumor/hemangiopericytoma, grade 3","type":"exact"},{"name":"adult malignant intracranial hemangiopericytoma","type":"exact"},{"name":"central nervous system solitary fibrous tumor/hemangiopericytoma, grade 3","type":"exact"},{"name":"malignant adult intracranial hemangiopericytoma","type":"exact"}],"termid":"MONDO:0003857","xrefs":{"Monarch":{"xref_id":"0003857"}}}


id: PBO:0089516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clathrin heavy chain Chc1","termid":"PBO:0089516"}


id: PBO:0072553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRAD, Ras related glycolysis inhibitor and calcium channel regulator","termid":"PBO:0072553"}


id: MONDO:0003810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare morphologic variant of bladder adenocarcinoma characterized by the presence of malignant glandular epithelial cells and clear cells forming a diffuse pattern.","definition_xrefs":["NCIT:C39849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bladder clear cell adenocarcinoma","termid":"MONDO:0003386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bladder diffuse clear cell adenocarcinoma","secondary_identifiers":["MEDGEN:267058","UMLS:C1511187","DOID:6210"],"synonyms":[{"name":"bladder diffuse clear cell adenocarcinoma","type":"exact"}],"termid":"MONDO:0003810","xrefs":{"Monarch":{"xref_id":"0003810"}}}


id: PBO:0091674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tgp1 sense interfering RNA","termid":"PBO:0091674"}


id: PR:O94309
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- git11 gene.","definition_xrefs":["UniProtKB:O94309","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine nucleotide-binding protein subunit gamma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.04","synonyms":[{"name":"Spom972h-git11","type":"exact"}],"termid":"PR:O94309"}


id: PBO:0109092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 10","termid":"PBO:0109092"}


id: MONDO:0018119
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disorder of phospholipids, sphingolipids and fatty acids biosynthesis with peripheral nerves predominant involvement (obsolete MONDO:0018119)","secondary_identifiers":["Orphanet:352309"],"termid":"MONDO:0018119","xrefs":{"Monarch":{"xref_id":"0018119"}}}


id: PBO:0055250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2677","termid":"PBO:0055250"}


id: PBO:0066948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 250","termid":"PBO:0066948"}


id: PBO:0047535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 1","termid":"PBO:0047535"}


id: MONDO:0024412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with Peptostreptococcus.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaerobic bacteria infectious disease","termid":"MONDO:0024389"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptostreptococcus infectious disease","secondary_identifiers":["ICD9:041.84","MEDGEN:842384","SCTID:135341000119101","UMLS:C1096562"],"synonyms":[{"name":"Peptostreptococcus caused disease or disorder","type":"exact"},{"name":"Peptostreptococcus disease or disorder","type":"exact"},{"name":"Peptostreptococcus infection","type":"exact"}],"termid":"MONDO:0024412","xrefs":{"Monarch":{"xref_id":"0024412"}}}


id: FYPO:0007902
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic cytokinesis begins at the same time as normal.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cytokinesis","termid":"FYPO:0001367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal onset of cytokinesis","termid":"FYPO:0007902"}


id: FYPO:0003771
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plasma membrane surrounding the cell tip is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell tip during vegetative growth","termid":"FYPO:0001586"},{"relation_name":"is_a","term_name":"decreased protein localization to plasma membrane during vegetative growth","termid":"FYPO:0008198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to plasma membrane of cell tip during vegetative growth","synonyms":[{"name":"decreased protein localisation to plasma membrane of cell tip during vegetative growth","type":"exact"},{"name":"decreased protein localization in plasma membrane of cell tip during vegetative growth","type":"exact"},{"name":"decreased protein localization to plasma membrane of cell end during vegetative growth","type":"exact"},{"name":"decreased protein localization to plasma membrane of cell tip during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to plasma membrane of cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0003771"}


id: PBO:0091022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type transcription factor (Mc-like)","termid":"PBO:0091022"}


id: PBO:0040814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BICD family like 3, pseudogene","termid":"PBO:0040814"}


id: MONDO:0015179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete intestinal disease due to vitamin absorption anomaly (obsolete MONDO:0015179)","secondary_identifiers":["Orphanet:104004"],"termid":"MONDO:0015179","xrefs":{"Monarch":{"xref_id":"0015179"}}}


id: PR:P87303
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A general transcription factor IIH subunit 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03841","PANTHER:PTHR13152:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II transcription factor B subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.13","secondary_identifiers":["UniProtKB:P87303"],"synonyms":[{"name":"RNA polymerase II transcription factor B 52 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II transcription factor B p52 subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GTF2H4","type":"exact"}],"termid":"PR:P87303"}


id: PBO:0003691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp2","termid":"PBO:0003691"}


id: PBO:0084256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inositol phosphatase involved in inositol pyrophosphate metabolism; hydrolyzes the beta-phosphate from the 5-diphosphate group of PP-InsPs including: 5PP-IP5 (IP7), 1,5PP-IP4 (IP8) and 5-PP-InsP4; functions as an anti-prion (anti-[PSI]) component; member of the atypical dual-specificity subgroup of the protein tyrosine-phosphatase (PTP) superfamily; localizes to the cytoplasm","termid":"PBO:0084256"}


id: GO:1903977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glial cell migration.","definition_xrefs":["PMID:19100238","GOC:BHF","GO_REF:0000058","GOC:nc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"regulation of glial cell migration","termid":"GO:1903975"},{"relation_name":"positively_regulates","term_name":"glial cell migration","termid":"GO:0008347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glial cell migration","synonyms":[{"name":"activation of glia cell migration","type":"narrow"},{"name":"activation of glial cell migration","type":"narrow"},{"name":"positive regulation of glia cell migration","type":"exact"},{"name":"up regulation of glia cell migration","type":"exact"},{"name":"up regulation of glial cell migration","type":"exact"},{"name":"up-regulation of glia cell migration","type":"exact"},{"name":"up-regulation of glial cell migration","type":"exact"},{"name":"upregulation of glia cell migration","type":"exact"},{"name":"upregulation of glial cell migration","type":"exact"}],"termid":"GO:1903977"}


id: MONDO:0018123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intellectual disability-obesity-brain malformations-facial dysmorphism syndrome is a rare, syndromic intellectual disability primarily characterized by moderate to severe intellectual disability, true-to-relative microcephaly and brain abnormalities including a thin corpus callosum, cerebellar hypoplasia, cerebral white matter hypoplasia and multi-focal hyperintensity of cerebral white matter on MRI. Obesity and distinctive craniofacial dysmorphism (including brachycephaly, round face, straight eyebrows, synophrys, hypertelorism, epicanthus, wide and depressed nasal bridge, protruding ears with uplifted lobe, downslanting corners of the mouth) are additional features.","definition_xrefs":["Orphanet:352530"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability-obesity-brain malformations-facial dysmorphism syndrome","secondary_identifiers":["UMLS:C4706414","MEDGEN:1644787","GARD:21521"],"synonyms":[{"name":"autosomal recessive intellectual disability due to TRAPPC9 deficiency","type":"exact"},{"name":"intellectual disability-obesity-brain malformations-facial dysmorphism syndrome","type":"exact"}],"termid":"MONDO:0018123","xrefs":{"Monarch":{"xref_id":"0018123"}}}


id: GO:0043795
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: A + D-glyceraldehyde + H2O = (R)-glycerate + AH2 + H+.","definition_xrefs":["RHEA:36047","PMID:10095793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"glyceraldehyde oxidoreductase activity","secondary_identifiers":["EC:1.2.99.8"],"termid":"GO:0043795"}


id: PBO:0039769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 4","termid":"PBO:0039769"}


id: PBO:0048177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphate dehydrogenase","termid":"PBO:0048177"}


id: PR:P78759
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- par2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta 2 isoform (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.12","synonyms":[{"name":"PP2A, B subunit, B' delta 2 isoform (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-par2","type":"exact"}],"termid":"PR:P78759"}


id: GO:0030833
data:
  {"annotated_genes":["SJAG_01993","SJAG_04100","SJAG_00521","SJAG_00279","SJAG_04479","SJAG_01894","SJAG_03086","SJAG_02566","SJAG_02700"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68641,69537,78478,79119,81183],"is_not":false,"summary":null,"term":"GO:0030833"},{"annotations":[94137,80885,77285,81936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the assembly of actin filaments by the addition of actin monomers to a filament.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin polymerization or depolymerization","termid":"GO:0008064"},{"relation_name":"is_a","term_name":"regulation of protein polymerization","termid":"GO:0032271"},{"relation_name":"regulates","term_name":"actin filament polymerization","termid":"GO:0030041"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03086":null,"SJAG_04100":null,"SJAG_04479":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0044085","GO:0008150","GO:0065003","GO:0030036"],"is_obsolete":false,"name":"regulation of actin filament polymerization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of actin polymerization","type":"exact"}],"termid":"GO:0030833","terms_by_termid":{"GO:0030833":null,"GO:0051016":null}}


id: GO:1900923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glycine import into a cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid import across plasma membrane","termid":"GO:0010958"},{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"regulates","term_name":"glycine import across plasma membrane","termid":"GO:1903804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of glycine import across plasma membrane","synonyms":[{"name":"regulation of glycine import","type":"broad"}],"termid":"GO:1900923"}


id: MONDO:0015730
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mosaic trisomy 17 is a rare chromosomal anomaly syndrome, with a highly variable clinical presentation, mostly characterized by growth delay, intellectual disability, body asymmetry with leg length differentiation, scoliosis, and congenital heart anomalies (e.g. ventricular septal defect). Prenatal ultrasound findings include intrauterine growth retardation, nuchal thickening brain anomalies (e.g. cerebellar hypoplasia), pleural effusion and single umbilical artery. Patients with no associated malformations have also been reported.","definition_xrefs":["Orphanet:1711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 17 disorder","termid":"MONDO:0020583"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic trisomy 17","secondary_identifiers":["GARD:5317","NCIT:C37865","MEDGEN:202107","MESH:C538044","SCTID:764622004","UMLS:C1096168"],"synonyms":[{"name":"Mosaic trisomy chromosome 17","type":"exact"},{"name":"Mosaic trisomy type 17","type":"exact"},{"name":"chromosome 17 duplication","type":"related"},{"name":"chromosome 17 trisomy","type":"related"},{"name":"chromosome 17, trisomy","type":"related"},{"name":"chromosome 17, trisomy mosaicism","type":"related"},{"name":"trisomy 17","type":"related"},{"name":"trisomy 17 mosaicism","type":"exact"}],"termid":"MONDO:0015730","xrefs":{"Monarch":{"xref_id":"0015730"}}}


id: MONDO:0013513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial atrial fibrillation in which the cause of the disease is a mutation in the KCNJ2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial atrial fibrillation","termid":"MONDO:0018054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial fibrillation, familial, 9","secondary_identifiers":["UMLS:C3151431","GARD:15737","OMIM:613980","MEDGEN:462781"],"synonyms":[{"name":"ATFB9","type":"related"},{"name":"KCNJ2 familial atrial fibrillation","type":"exact"},{"name":"atrial fibrillation, familial, 9","type":"exact"},{"name":"atrial fibrillation, familial, type 9","type":"exact"},{"name":"familial atrial fibrillation caused by mutation in KCNJ2","type":"exact"}],"termid":"MONDO:0013513","xrefs":{"Monarch":{"xref_id":"0013513"}}}


id: PBO:0064603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 3 homeobox 1","termid":"PBO:0064603"}


id: PBO:0080983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 18","termid":"PBO:0080983"}


id: GO:0007267
data:
  {"annotated_genes":["SJAG_00781"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117447],"is_not":false,"summary":null,"term":"GO:0007267"}]},"cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another. This process includes signal transduction in the receiving cell and, where applicable, release of a ligand and any processes that actively facilitate its transport and presentation to the receiving cell. Examples include signaling via soluble ligands, via cell adhesion molecules and via gap junctions.","definition_xrefs":["GOC:dos","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication","termid":"GO:0007154"},{"relation_name":"is_a","term_name":"signaling","termid":"GO:0023052"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00781":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cell-cell signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell-cell signalling","type":"exact"}],"termid":"GO:0007267","terms_by_termid":{"GO:0007267":null}}


id: GO:0015240
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of amiloride from one side of a membrane to the other. Amiloride is a potent and specific inhibitor of sodium ion entry into cells. It is used as a potassium-sparing diuretic.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete amiloride transmembrane transporter activity (obsolete GO:0015240)","synonyms":[{"name":"amiloride transporter activity","type":"related"}],"termid":"GO:0015240"}


id: MONDO:0000900
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete PTEN hamartoma tumor syndrome (obsolete MONDO:0000900)","termid":"MONDO:0000900","xrefs":{"Monarch":{"xref_id":"0000900"}}}


id: GO:0021507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining together of the neural folds of the caudal opening of the neural tube. The posterior neuropore appears before the process of neural tube closure is complete.","definition_xrefs":["GOC:dgh","GOC:jid","GOC:dph","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"is_a","term_name":"cell-cell adhesion involved in neural tube closure","termid":"GO:0060608"},{"relation_name":"part_of","term_name":"neuropore closure","termid":"GO:0021995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"posterior neuropore closure","termid":"GO:0021507"}


id: GO:0021545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cranial nerves over time, from its formation to the mature structure. The cranial nerves are composed of twelve pairs of nerves that emanate from the nervous tissue of the hindbrain. These nerves are sensory, motor, or mixed in nature, and provide the motor and general sensory innervation of the head, neck and viscera. They mediate vision, hearing, olfaction and taste and carry the parasympathetic innervation of the autonomic ganglia that control visceral functions.","definition_xrefs":["GOC:dgh","ISBN:0838580343","GO_REF:0000021","GOC:dph","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nerve development","termid":"GO:0021675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cranial nerve development","termid":"GO:0021545"}


id: PBO:0066553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 17","termid":"PBO:0066553"}


id: PBO:0030369
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_origin_firing_efficiency","termid":"PBO:0030369"}


id: GO:0014823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an activity stimulus.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stimulus","termid":"GO:0050896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to activity","synonyms":[{"name":"response to exercise","type":"related"}],"termid":"GO:0014823"}


id: PBO:0083392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps ORF ATS1/YAL020C","termid":"PBO:0083392"}


id: PBO:0048655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein delta 4","termid":"PBO:0048655"}


id: MONDO:0022432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"alves Castelo dos Santos syndrome","secondary_identifiers":["MEDGEN:419758","MESH:C536593","UMLS:C2931256"],"synonyms":[{"name":"ectodermal dysplasia syndrome of hypotrichosis, onychodysplasia, hyperkeratosis, kyphoscoliosis, and cataract","type":"related"}],"termid":"MONDO:0022432","xrefs":{"Monarch":{"xref_id":"0022432"}}}


id: PBO:0079069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Trp (anticodon CCA) 3-3","termid":"PBO:0079069"}


id: MONDO:1012407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acral mutilation syndrome, non-human animal","termid":"MONDO:1011884"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acral mutilation syndrome, dog","secondary_identifiers":["OMIA:001514-9615"],"termid":"MONDO:1012407","xrefs":{"Monarch":{"xref_id":"1012407"}}}


id: GO:0080163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of protein serine/threonine phosphatase activity: catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate.","definition_xrefs":["PMID:19407142"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of protein serine/threonine phosphatase activity (obsolete GO:0080163)","synonyms":[{"name":"regulation of protein phosphatase type 2c activity","type":"narrow"}],"termid":"GO:0080163"}


id: PBO:0038859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTSL4 antisense RNA 2","termid":"PBO:0038859"}


id: PBO:0113337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; null mutant is viable but shows increased loss of mitochondrial genome and synthetic interaction with prohibitin (phb1); contains an intron; SWAT-GFP and mCherry fusion proteins localize to the mitochondria; localizes to the peroxisome in glucose; YER093C-A has a paralog, YBL059W, that arose from the whole genome duplication","termid":"PBO:0113337"}


id: PBO:0091205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg","termid":"PBO:0091205"}


id: MONDO:0017530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polysyndactyly 4","termid":"MONDO:0008272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"polysyndactyly, bilateral","secondary_identifiers":["Orphanet:295161","icd11.foundation:622710483"],"synonyms":[{"name":"preaxial polydactyly type 4, bilateral","type":"exact"}],"termid":"MONDO:0017530","xrefs":{"Monarch":{"xref_id":"0017530"}}}


id: PATO:0000885
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000885 male fertility value (obsolete PATO:0000885)","termid":"PATO:0000885"}


id: PBO:0047620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folliculogenesis specific bHLH transcription factor","termid":"PBO:0047620"}


id: GO:0010043
data:
  {"annotated_genes":["SJAG_01803","SJAG_01078"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95580,95579],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010312"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a zinc ion stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01078":null,"SJAG_01803":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to zinc ion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to zinc","type":"exact"}],"termid":"GO:0010043","terms_by_termid":{"GO:0010312":null}}


id: GO:0071587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent alteration of one or more amino acid residues within the CAAX box region of CAAX box proteins.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete CAAX-box protein modification (obsolete GO:0071587)","termid":"GO:0071587"}


id: PBO:0091848
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ris-Related Protein 2","termid":"PBO:0091848"}


id: GO:0006338
data:
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id: PBO:0080483
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id: MONDO:0037792
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id: GO:1903529
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id: MONDO:0001360
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id: PBO:0085951
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id: PATO:0001353
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id: GO:0000192
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id: PBO:0044942
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id: MONDO:1012698
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id: GO:1901559
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id: GO:0052846
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id: PBO:0005315
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id: GO:0008772
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-seryl-[isocitrate dehydrogenase] = ADP + H+ + O-phospho-L-seryl-[isocitrate dehydrogenase].","definition_xrefs":["RHEA:43540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine kinase activity","termid":"GO:0106310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0004672","GO:0016301","GO:0003824","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"[isocitrate dehydrogenase (NADP+)] kinase activity","secondary_identifiers":["MetaCyc:PHOSICITDEHASE-RXN","EC:2.7.11.5"],"synonyms":[{"name":"ATP:isocitrate dehydrogenase (NADP+) phosphotransferase activity","type":"related"},{"name":"ICDH kinase/phosphatase activity","type":"broad"},{"name":"IDH kinase activity","type":"related"},{"name":"IDH kinase/phosphatase activity","type":"broad"},{"name":"IDH-K/P","type":"related"},{"name":"IDHK/P","type":"broad"},{"name":"isocitrate dehydrogenase (NADP) kinase activity","type":"related"},{"name":"isocitrate dehydrogenase (NADP+) kinase activity","type":"related"},{"name":"isocitrate dehydrogenase kinase (phosphorylating) activity","type":"related"},{"name":"isocitrate dehydrogenase kinase activity","type":"related"},{"name":"isocitrate dehydrogenase kinase/phosphatase activity","type":"broad"}],"termid":"GO:0008772"}


id: FYPO:0002658
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of trehalose 6-phosphate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular trehalose 6-phosphate level","synonyms":[{"name":"increased cellular trehalose 6-phosphate level during mitotic cell cycle","type":"related"},{"name":"increased cellular trehalose 6-phosphate level during vegetative growth","type":"exact"},{"name":"increased cellular trehalose-6P level","type":"exact"},{"name":"increased trehalose 6-phosphate accumulation","type":"related"}],"termid":"FYPO:0002658"}


id: GO:0141164
data:
  {"annotated_genes":["SJAG_00984","SJAG_01816","SJAG_04154","SJAG_01179","SJAG_00354"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95082,102917,103910,112846,120612],"is_not":false,"summary":null,"term":"GO:0141164"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of misfolded proteins in the mitochondrion, which are targeted for degradation.","definition_xrefs":["PMID:38280230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein quality control for misfolded or incompletely synthesized proteins","termid":"GO:0006515"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00354":null,"SJAG_00984":null,"SJAG_01179":null,"SJAG_01816":null,"SJAG_04154":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"mitochondrial protein quality control","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0141164","terms_by_termid":{"GO:0141164":null}}


id: GO:0045857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any heritable epigenetic process that stops, prevents, or reduces the frequency, rate or extent of protein function by self-perpetuating conformational conversions of normal proteins in healthy cells. This is distinct from, though mechanistically analogous to, disease states associated with prion propagation and amyloidogenesis. A single protein, if it carries a glutamine/asparagine-rich ('prion') domain, can sometimes stably exist in at least two distinct physical states, each associated with a different phenotype; propagation of one of these traits is achieved by a self-perpetuating change in the protein from one form to the other, mediated by conformational changes in the glutamine/asparagine-rich domain. Prion domains are both modular and transferable to other proteins, on which they can confer a heritable epigenetic alteration of function; existing bioinformatics data indicate that they are rare in non-eukarya, but common in eukarya.","definition_xrefs":["GOC:dph","GOC:go_curators","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of molecular function, epigenetic (obsolete GO:0045857)","synonyms":[{"name":"down regulation of protein activity, epigenetic","type":"exact"},{"name":"down-regulation of protein activity, epigenetic","type":"exact"},{"name":"downregulation of protein activity, epigenetic","type":"exact"},{"name":"inhibition of protein activity, epigenetic","type":"narrow"},{"name":"negative regulation of protein activity, epigenetic","type":"exact"}],"termid":"GO:0045857"}


id: PBO:0038794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 1A (pseudogene)","termid":"PBO:0038794"}


id: GO:0000492
data:
  {"annotated_genes":["SJAG_00752","SJAG_05223","SJAG_05679","SJAG_03036","SJAG_04355","SJAG_01567"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69633,74661,78028,81492,99757,105870],"is_not":false,"summary":null,"term":"GO:0000492"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins and a box C/D snoRNA to form a box C/D small nucleolar ribonucleoprotein (snoRNP) complex.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small nucleolar ribonucleoprotein complex assembly","termid":"GO:0000491"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00752":null,"SJAG_01567":null,"SJAG_03036":null,"SJAG_04355":null,"SJAG_05223":null,"SJAG_05679":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"box C/D snoRNP assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"box C/D small nucleolar ribonucleoprotein complex assembly","type":"exact"}],"termid":"GO:0000492","terms_by_termid":{"GO:0000492":null}}


id: MONDO:0100574
data:
  {"annotated_genes":["SJAG_03536"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014517"}]},"cv_name":"mondo","definition":"Epilepsy that is characterized by generalized seizure types and may have typical interictal and/or ictal EEG findings that accompany generalized seizure types (for example generalized spike-wave).","direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy","termid":"MONDO:0005027"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03536":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"generalized epilepsy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0014548","NCIT:C3021","MEDGEN:4507"],"termid":"MONDO:0100574","terms_by_termid":{"MONDO:0014517":null},"xrefs":{"Monarch":{"xref_id":"0100574"}}}


id: GO:0021887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a hypothalamus neuron that releases gonadotrophin-releasing hormone.","definition_xrefs":["GOC:cls","GOC:dph","GOC:jid","PMID:12626695","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"hypothalamus gonadotrophin-releasing hormone neuron differentiation","termid":"GO:0021886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypothalamus gonadotrophin-releasing hormone neuron fate commitment","synonyms":[{"name":"hypothalamus gonadotropin-releasing hormone neuron fate commitment","type":"related"}],"termid":"GO:0021887"}


id: PBO:0073035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCTR antisense RNA 1","termid":"PBO:0073035"}


id: GO:0036095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of invasive growth as a result of deprivation of glucose, by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:14668363","GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of invasive growth in response to glucose limitation by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0036095)","synonyms":[{"name":"transcriptional activation of genes involved in invasive growth","type":"related"}],"termid":"GO:0036095"}


id: MONDO:0043797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Penetrating and non-penetrating injuries to the spinal cord resulting from traumatic external forces (e.g., WOUNDS, GUNSHOT; WHIPLASH INJURIES; etc.).","definition_xrefs":["MESH:D013119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vertebral column disorder","termid":"MONDO:0000812"},{"relation_name":"is_a","term_name":"spinal cord disorder","termid":"MONDO:0002545"},{"relation_name":"is_a","term_name":"spinal injury","termid":"MONDO:0037747"},{"relation_name":"is_a","term_name":"nervous system injury","termid":"MONDO:0044745"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal cord injury","secondary_identifiers":["GARD:19109","Orphanet:90058","SCTID:90584004"],"synonyms":[{"name":"Contusions, spinal cord","type":"related"},{"name":"Injuries, spinal cord","type":"related"},{"name":"Lacerations, spinal cord","type":"related"},{"name":"Myelopathies, post-traumatic","type":"related"},{"name":"Myelopathies, traumatic","type":"related"},{"name":"Transections, spinal cord","type":"related"},{"name":"Traumas, spinal cord","type":"related"},{"name":"contusion, spinal cord","type":"related"},{"name":"cord Contusions, spinal","type":"related"},{"name":"cord Injuries, spinal","type":"related"},{"name":"cord Lacerations, spinal","type":"related"},{"name":"cord Transections, spinal","type":"related"},{"name":"cord Traumas, spinal","type":"related"},{"name":"cord contusion, spinal","type":"related"},{"name":"cord injury, spinal","type":"related"},{"name":"cord laceration, spinal","type":"related"},{"name":"cord transection, spinal","type":"related"},{"name":"cord trauma, spinal","type":"related"},{"name":"injury of spinal cord","type":"exact"},{"name":"injury, spinal cord","type":"related"},{"name":"laceration, spinal cord","type":"related"},{"name":"myelopathy, post-traumatic","type":"related"},{"name":"myelopathy, traumatic","type":"related"},{"name":"post traumatic myelopathy","type":"related"},{"name":"post-traumatic Myelopathies","type":"related"},{"name":"post-traumatic myelopathy","type":"related"},{"name":"spinal cord Contusions","type":"related"},{"name":"spinal cord Lacerations","type":"related"},{"name":"spinal cord Transections","type":"related"},{"name":"spinal cord Traumas","type":"related"},{"name":"spinal cord contusion","type":"related"},{"name":"spinal cord injury","type":"exact"},{"name":"spinal cord laceration","type":"related"},{"name":"spinal cord transection","type":"related"},{"name":"spinal cord trauma","type":"related"},{"name":"transection, spinal cord","type":"related"},{"name":"trauma, spinal cord","type":"related"},{"name":"traumatic Myelopathies","type":"related"},{"name":"traumatic myelopathy","type":"related"}],"termid":"MONDO:0043797","xrefs":{"Monarch":{"xref_id":"0043797"}}}


id: GO:0032936
data:
  {"annotated_genes":["SJAG_01307","SJAG_04018"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77233,107664],"is_not":false,"summary":null,"term":"GO:0032936"}]},"cv_name":"cellular_component","definition":"A protein complex formed by the association of sterol regulatory element binding protein (SREBP) and SREBP-cleavage-activating protein (SCAP) in the ER membrane; in the absence of sterols, the SREBP-SCAP complex is packaged into COPII vesicles and travels to the Golgi apparatus to be processed.","definition_xrefs":["PMID:12923525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01307":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SREBP-SCAP complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Sre1-Scp1 complex","type":"exact"}],"termid":"GO:0032936","terms_by_termid":{"GO:0032936":null}}


id: SO:0001476
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A plasmid that occurs naturally.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"natural","termid":"SO:0000782"},{"relation_name":"is_a","term_name":"plasmid","termid":"SO:0000155"},{"relation_name":"is_a","term_name":"extrachromosomal_mobile_genetic_element","termid":"SO:0001038"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natural_plasmid","synonyms":[{"name":"natural plasmid","type":"exact"}],"termid":"SO:0001476"}


id: GO:0019268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of glutamate, catalyzed by the enzyme glutamate dehydrogenase (NADP+).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamate biosynthetic process, using glutamate dehydrogenase (NAD(P)+) (obsolete GO:0019268)","synonyms":[{"name":"glutamate anabolism, using glutamate dehydrogenase (NAD(P)+)","type":"exact"},{"name":"glutamate biosynthetic process, using glutamate dehydrogenase (NAD(P)+)","type":"exact"},{"name":"glutamate formation, using glutamate dehydrogenase (NAD(P)+)","type":"exact"},{"name":"glutamate synthesis, using glutamate dehydrogenase (NAD(P)+)","type":"exact"}],"termid":"GO:0019268"}


id: PBO:0059678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 44","termid":"PBO:0059678"}


id: GO:0070941
data:
  {"annotated_genes":["SJAG_02707","SJAG_02338","SJAG_02626","SJAG_04227"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71540,73092,105692,119705],"is_not":false,"summary":null,"term":"GO:0070941"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an eisosome, a cell part that is composed of the eisosome membrane and eisosome filaments. The eisosome membrane, also called the MCC domain, is a furrow-like plasma membrane sub-domain with associated integral transmembrane proteins. The eisosome filaments form a scaffolding lattice on the cytoplasmic face of the membrane.","definition_xrefs":["GOC:jp","PMID:19564405","GOC:al","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02338":null,"SJAG_02626":null,"SJAG_02707":null,"SJAG_04227":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"eisosome assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0070941","terms_by_termid":{"GO:0070941":null}}


id: PBO:0059810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 36","termid":"PBO:0059810"}


id: MONDO:0009185
data:
  {"annotated_genes":["SJAG_04454"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87227],"is_not":false,"summary":null,"term":"MONDO:0009185"}]},"cv_name":"mondo","definition":"Kohlschütter-TC6nz syndrome (KTS) is a genetically heterogeneous autosomal recessive syndrome characterized by the triad of amelogenesis imperfect, infantile onset epilepsy, intellectual disability with or without regression and dementia.","definition_xrefs":["Orphanet:1946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04454":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"amelocerebrohypohidrotic syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0406740","DOID:0111668","MEDGEN:98036","MESH:C537213","GARD:3128","OMIM:226750","SCTID:109478007"],"synonyms":[{"name":"KOHLSCHUTTER-Tonz syndrome","type":"related"},{"name":"KTZS","type":"related"},{"name":"Kohlschutter Tonz syndrome","type":"related"},{"name":"Kohlschutter syndrome","type":"related"},{"name":"Kohlschutter-Tonz syndrome","type":"exact"},{"name":"amelocerebrohypohidrotic syndrome","type":"exact"},{"name":"epilepsy and Yellow teeth","type":"related"},{"name":"epilepsy dementia amelogenesis imperfecta","type":"related"},{"name":"epilepsy, dementia, and amelogenesis imperfecta","type":"related"},{"name":"epilepsy-dementia-amelogenesis imperfecta syndrome","type":"exact"}],"termid":"MONDO:0009185","terms_by_termid":{"MONDO:0009185":null},"xrefs":{"Monarch":{"xref_id":"0009185"}}}


id: GO:0008047
data:
  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molecular function regulator that increases a catalytic activity.","definition_xrefs":["GOC:pdt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"},{"relation_name":"is_a","term_name":"molecular function activator 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id: PBO:0067021
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 34, pseudogene","termid":"PBO:0067021"}


id: PBO:0055011
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2426","termid":"PBO:0055011"}


id: PBO:0046773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exostosin glycosyltransferase 1","termid":"PBO:0046773"}


id: GO:0090189
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of branching involved in ureteric bud morphogenesis, the process in which the branching structure of the ureteric bud is generated and organized. The ureteric bud is an epithelial tube that grows out from the metanephric duct. The bud elongates and branches to give rise to the ureter and kidney collecting tubules.","definition_xrefs":["GOC:yaf","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of morphogenesis of a branching structure","termid":"GO:0060688"},{"relation_name":"is_a","term_name":"regulation of kidney development","termid":"GO:0090183"},{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"branching involved in ureteric bud morphogenesis","termid":"GO:0001658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of branching involved in ureteric bud morphogenesis","termid":"GO:0090189"}


id: GO:0030584
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a sporocarp over time, from its formation to the mature structure. The sporocarp is a spore bearing fruiting body organ. An example of this process is found in the Fungal species Coprinopsis cinerea.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive fruiting body development","termid":"GO:0030582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sporocarp development","synonyms":[{"name":"fruiting body development","type":"broad"}],"termid":"GO:0030584"}


id: MONDO:1012387
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile with age-dependent emphysema hypotrichosis, non-human animal","termid":"MONDO:1011753"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"juvenile with age-dependent emphysema hypotrichosis, pig","secondary_identifiers":["OMIA:001458-9823"],"termid":"MONDO:1012387","xrefs":{"Monarch":{"xref_id":"1012387"}}}


id: MONDO:0859332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"complex cortical dysplasia with other brain malformations","termid":"MONDO:0000904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortical dysplasia, complex, with other brain malformations 11","secondary_identifiers":["OMIM:620156","UMLS:C5774270","MEDGEN:1824043"],"termid":"MONDO:0859332","xrefs":{"Monarch":{"xref_id":"0859332"}}}


id: PBO:0089511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-methyltransferase","termid":"PBO:0089511"}


id: PBO:0084116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Helicase-like protein encoded within the telomeric Y' element; induced by treatment with 8-methoxypsoralen and UVA irradiation; SWAT-GFP and mCherry fusion proteins localize to the nucleus","termid":"PBO:0084116"}


id: PBO:0076903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 101","termid":"PBO:0076903"}


id: PBO:0051987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Janus kinase 3","termid":"PBO:0051987"}


id: PBO:0073852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member 3 pseudogene 2","termid":"PBO:0073852"}


id: GO:0048922
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a migrating neuromast primordium deposits clusters of undifferentiated cells (proneuromasts) along its migratory path in the developing posterior lateral line.","definition_xrefs":["PMID:15832385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast deposition","termid":"GO:0048885"},{"relation_name":"part_of","term_name":"posterior lateral line neuromast development","termid":"GO:0048919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line neuromast deposition","termid":"GO:0048922"}


id: PBO:0001503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine ribohydrolase (predicted)","termid":"PBO:0001503"}


id: PBO:0073339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 1","termid":"PBO:0073339"}


id: GO:0035585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals in which a cell uses calcium ions imported from an extracellular source to convert a signal into a response.","definition_xrefs":["GOC:BHF","GOC:bf","PMID:20192754"],"gene_count":0,"genotype_count":0,"name":"obsolete calcium-mediated signaling using extracellular calcium source (obsolete GO:0035585)","synonyms":[{"name":"calcium signaling using extracellular calcium source","type":"exact"},{"name":"calcium signalling using extracellular calcium source","type":"exact"},{"name":"calcium-mediated signalling using extracellular calcium source","type":"exact"},{"name":"extracellular calcium influx","type":"narrow"}],"termid":"GO:0035585"}


id: PBO:0042006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 61","termid":"PBO:0042006"}


id: PBO:0018057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (cytosine) methyltransferase Trm140 (predicted)","termid":"PBO:0018057"}


id: MONDO:0000692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Kleine-Levin syndrome (obsolete MONDO:0000692)","termid":"MONDO:0000692","xrefs":{"Monarch":{"xref_id":"0000692"}}}


id: PBO:0088285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4 kinase plasma membrane scaffold Erf3 partner Ypp1","termid":"PBO:0088285"}


id: MONDO:0957535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 112","secondary_identifiers":["MEDGEN:1841269","OMIM:620449","UMLS:C5830633"],"termid":"MONDO:0957535","xrefs":{"Monarch":{"xref_id":"0957535"}}}


id: PBO:0000776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human retinoblastoma binding protein 2-like family","termid":"PBO:0000776"}


id: PBO:0040484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin 7","termid":"PBO:0040484"}


id: PBO:0043525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COA6 antisense RNA 1","termid":"PBO:0043525"}


id: MONDO:0008568
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid hormone plasma membrane transport defect","secondary_identifiers":["MEDGEN:396060","MESH:C536916","OMIM:188560","UMLS:C1861101"],"synonyms":[{"name":"hyperthyroxinemia, Eumetabolic, due to T4 plasma Membrane Transport defect","type":"exact"},{"name":"thyroid hormone plasma membrane transport defect","type":"exact"},{"name":"thyroid hormone resistance due to T4 plasma Membrane transport defect","type":"exact"}],"termid":"MONDO:0008568","xrefs":{"Monarch":{"xref_id":"0008568"}}}


id: PBO:0049303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase mu 4","termid":"PBO:0049303"}


id: PBO:0061308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropeptide FF receptor 2","termid":"PBO:0061308"}


id: MONDO:0007717
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemoglobin--variants for which the chain carrying the mutation 1S unknown or uncertain","secondary_identifiers":["MEDGEN:333610","OMIM:142309","UMLS:C1840647"],"synonyms":[{"name":"HEMOGLOBIN--variants FOR which the chain carrying the mutation IS unknown or uncertain","type":"related"}],"termid":"MONDO:0007717","xrefs":{"Monarch":{"xref_id":"0007717"}}}


id: MONDO:0004432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign teratoma that arises from the pericardium.","definition_xrefs":["NCIT:C6744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature teratoma","termid":"MONDO:0003517"},{"relation_name":"is_a","term_name":"neoplasm of pericardium","termid":"MONDO:0021381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"mature pericardial teratoma","secondary_identifiers":["MEDGEN:233673","UMLS:C1334638","DOID:8012"],"synonyms":[{"name":"benign pericardial teratoma","type":"exact"},{"name":"mature pericardial teratoma","type":"exact"},{"name":"mature teratoma of pericardium","type":"exact"},{"name":"mature teratoma of the pericardium","type":"exact"},{"name":"pericardium mature teratoma","type":"exact"}],"termid":"MONDO:0004432","xrefs":{"Monarch":{"xref_id":"0004432"}}}


id: GO:0046895
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The methylation of the N-terminal isoleucine of proteins to form the derivative N-methyl-L-isoleucine.","definition_xrefs":["RESID:AA0336"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-isoleucine methylation (obsolete GO:0046895)","termid":"GO:0046895"}


id: MONDO:0015599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atopic keratoconjunctivitis is a rare and chronic allergic disease of the cornea and conjunctiva occurring in all age groups characterized by severe itching and burning sensation, conjunctival injection, photophobia and edema with serious cases leading to ulceration of the cornea which can result in blindness. It is often associated with atopic dermatitis.","definition_xrefs":["Orphanet:163934"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"atopic keratoconjunctivitis","secondary_identifiers":["ICD9:370.49","MedDRA:10069664","MEDGEN:698110","SCTID:403434009","UMLS:C1274788","ICD10CM:H16.2","GARD:20053","icd11.foundation:1941631830"],"termid":"MONDO:0015599","xrefs":{"Monarch":{"xref_id":"0015599"}}}


id: MONDO:0100147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndromic intellectual disability disorder that is characterized by significant neurodevelopmental disabilities with limited to absent speech, behavioral issues, and craniofacial anomalies. Most distinctive features are neurodevelopmental with invariably severely limited speech, cleft or high arched palate, dental anomalies (crowding, macrodontia, abnormal shape), and behavioral issues with or without bone or brain anomalies.","definition_xrefs":["PMID:17377962","PMID:29436146","PMID:31021519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant syndromic intellectual disability","termid":"MONDO:0100601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"SATB2 associated disorder","secondary_identifiers":["GARD:22326","Orphanet:576278"],"synonyms":[{"name":"SAS","type":"exact"},{"name":"SATB2 associated disorder","type":"exact"},{"name":"SATB2-associated syndrome","type":"exact"}],"termid":"MONDO:0100147","xrefs":{"Monarch":{"xref_id":"0100147"}}}


id: PBO:0043045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHORDC1 pseudogene 1","termid":"PBO:0043045"}


id: GO:0070446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or decreases the rate or extent of oligodendrocyte progenitor proliferation.","definition_xrefs":["GOC:mah","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gliogenesis","termid":"GO:0014014"},{"relation_name":"is_a","term_name":"regulation of oligodendrocyte progenitor proliferation","termid":"GO:0070445"},{"relation_name":"is_a","term_name":"negative regulation of neural precursor cell proliferation","termid":"GO:2000178"},{"relation_name":"negatively_regulates","term_name":"oligodendrocyte progenitor proliferation","termid":"GO:0070444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of oligodendrocyte progenitor proliferation","synonyms":[{"name":"negative regulation of oligodendrocyte precursor proliferation","type":"exact"}],"termid":"GO:0070446"}


id: GO:0007088
data:
  {"annotated_genes":["SJAG_04259","SJAG_02169","SJAG_02380","SJAG_03353","SJAG_04573","SJAG_01837","SJAG_04968","SJAG_02058","SJAG_01330","SJAG_01297","SJAG_01805","SJAG_03681","SJAG_02451","SJAG_04126","SJAG_04999","SJAG_01082","SJAG_00666","SJAG_03048","SJAG_02498","SJAG_02336","SJAG_04884","SJAG_00883","SJAG_01679","SJAG_03126","SJAG_04699"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112778],"is_not":false,"summary":null,"term":"GO:0007088"},{"annotations":[101403,116129,110092,109064,113813,117760,105711,115641,92534],"is_not":false,"rel_names":["negatively_regulates","regulates","is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[103616,108148,111752,101245,116359,117418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[96009],"is_not":false,"rel_names":["regulates","is_a","negatively_regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[118536],"is_not":false,"rel_names":["positively_regulates","regulates","is_a"],"summary":null,"term":"GO:0090267"},{"annotations":[99510,101960,103925,104201,95617,116626,113228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045842"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitosis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle","termid":"GO:0007346"},{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of nuclear division","termid":"GO:0051783"},{"relation_name":"regulates","term_name":"mitotic nuclear division","termid":"GO:0140014"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00666":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02058":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02380":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04573":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04968":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of mitotic nuclear division","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of mitosis","type":"exact"}],"termid":"GO:0007088","terms_by_termid":{"GO:0007088":null,"GO:0007094":null,"GO:0045842":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null}}


id: MOD:00663
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to a methylated lysine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"methylated lysine","synonyms":[{"name":"MeLys","type":"exact"}],"termid":"MOD:00663"}


id: GO:0033201
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: RDP-glucose + [alpha-D-glucosyl-(1,4)]n = RDP + [alpha-D-glucosyl-(1,4)]n+1, where RDP is ADP or UDP.","definition_xrefs":["PMID:17472966"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-1,4-glucan synthase activity (obsolete GO:0033201)","synonyms":[{"name":"1,4-alpha-glucan synthase activity","type":"exact"}],"termid":"GO:0033201"}


id: PBO:0074362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes flexible hinge domain containing 1","termid":"PBO:0074362"}


id: PBO:0090965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III complex large subunit Rpc1","termid":"PBO:0090965"}


id: GO:0005189
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete milk protein (obsolete GO:0005189)","synonyms":[{"name":"milk protein","type":"exact"}],"termid":"GO:0005189"}


id: GO:0009142
data:
  {"annotated_genes":["SJAG_04849","SJAG_05024","SJAG_02105","SJAG_00533","SJAG_00885","SJAG_00542","SJAG_MIT37","SJAG_05204","SJAG_04122","SJAG_MIT15","SJAG_03708","SJAG_02564","SJAG_04657","SJAG_04627","SJAG_02887","SJAG_07003","SJAG_00915","SJAG_04665","SJAG_03925","SJAG_00985","SJAG_00133","SJAG_00836","SJAG_MIT09","SJAG_02598","SJAG_00438","SJAG_03114","SJAG_01298","SJAG_04422"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[65646],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[69605,94783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[72780,70216,94251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[104055,65644,76647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[119868],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905707"},{"annotations":[96661,109737,110629,120955,94666,95681,90944,106841,117705,120949,120943,109645,103636,105497,104857,95092,105471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[109090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009216"},{"annotations":[109092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009212"},{"annotations":[65645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a nucleoside triphosphate, a compound consisting of a nucleobase linked to a deoxyribose or ribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate metabolic process","termid":"GO:0009141"},{"relation_name":"is_a","term_name":"nucleoside phosphate biosynthetic process","termid":"GO:1901293"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00438":null,"SJAG_00533":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00885":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_01298":null,"SJAG_02105":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02887":null,"SJAG_03114":null,"SJAG_03708":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_04422":null,"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null,"SJAG_04849":null,"SJAG_05024":null,"SJAG_05204":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"nucleoside triphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"nucleoside triphosphate anabolism","type":"exact"},{"name":"nucleoside triphosphate biosynthesis","type":"exact"},{"name":"nucleoside triphosphate formation","type":"exact"},{"name":"nucleoside triphosphate synthesis","type":"exact"}],"termid":"GO:0009142","terms_by_termid":{"GO:0006183":null,"GO:0006228":null,"GO:0006235":null,"GO:0006241":null,"GO:0009212":null,"GO:0009216":null,"GO:0042776":null,"GO:0044210":null,"GO:0044211":null,"GO:1905707":null}}


id: PBO:0055668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat and Ig domain containing 4","termid":"PBO:0055668"}


id: PBO:0000625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WLM domain protein","termid":"PBO:0000625"}


id: GO:0008015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The flow of blood through the body of an animal, enabling the transport of nutrients to the tissues and the removal of waste products.","definition_xrefs":["ISBN:0192800825","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circulatory system process","termid":"GO:0003013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood circulation","secondary_identifiers":["GO:0070261"],"synonyms":[{"name":"hemolymph circulation","type":"related"}],"termid":"GO:0008015"}


id: PBO:0083086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA binding component of the SBF complex (Swi4p-Swi6p); a transcriptional activator that in concert with MBF (Mbp1-Swi6p) regulates late G1-specific transcription of targets including cyclins and genes required for DNA synthesis and repair; Slt2p-independent regulator of cold growth; acetylation at two sites, K1016 and K1066, regulates interaction with Swi6p","termid":"PBO:0083086"}


id: GO:0045710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of salivary gland determination in a larval organism.","definition_xrefs":["GOC:tb","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of salivary gland boundary specification","termid":"GO:0045705"},{"relation_name":"is_a","term_name":"regulation of larval salivary gland boundary specification","termid":"GO:0045708"},{"relation_name":"negatively_regulates","term_name":"larval salivary gland boundary specification","termid":"GO:0007433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of larval salivary gland boundary specification","synonyms":[{"name":"down regulation of larval salivary gland determination","type":"exact"},{"name":"down-regulation of larval salivary gland determination","type":"exact"},{"name":"downregulation of larval salivary gland determination","type":"exact"},{"name":"inhibition of larval salivary gland determination","type":"narrow"},{"name":"negative regulation of larval salivary gland determination","type":"exact"}],"termid":"GO:0045710"}


id: PBO:0043418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnosine dipeptidase 1","termid":"PBO:0043418"}


id: MONDO:0012670
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the LRTOMT gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 63","secondary_identifiers":["MEDGEN:409872","UMLS:C1969621","GARD:22627","DOID:0110515","OMIM:611451","MESH:C566951"],"synonyms":[{"name":"DFNB63","type":"narrow"},{"name":"LRTOMT autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 63","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 63","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in LRTOMT","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 63","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 63","type":"exact"},{"name":"deafness, autosomal recessive 63","type":"narrow"},{"name":"deafness, autosomal recessive type 63","type":"narrow"}],"termid":"MONDO:0012670","xrefs":{"Monarch":{"xref_id":"0012670"}}}


id: PBO:0070940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 48","termid":"PBO:0070940"}


id: PBO:0045649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 7","termid":"PBO:0045649"}


id: PATO:0001949
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's terminating abruptly in a little point.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sharp","termid":"PATO:0001419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pointleted","termid":"PATO:0001949"}


id: PBO:0001710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARP2/3 actin-organizing complex subunit Arc34","termid":"PBO:0001710"}


id: GO:0019724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved with the carrying out of an immune response by a B cell, through, for instance, the production of antibodies or cytokines, or antigen presentation to T cells.","definition_xrefs":["GO_REF:0000022","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte mediated immunity","termid":"GO:0002449"},{"relation_name":"is_a","term_name":"adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell mediated immunity","synonyms":[{"name":"B lymphocyte mediated immune effector process","type":"exact"},{"name":"B lymphocyte mediated immunity","type":"exact"},{"name":"B-cell mediated immune effector process","type":"exact"},{"name":"B-cell mediated immunity","type":"exact"},{"name":"B-lymphocyte mediated immune effector process","type":"exact"},{"name":"B-lymphocyte mediated immunity","type":"exact"}],"termid":"GO:0019724"}


id: PBO:0083454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene DAL80","termid":"PBO:0083454"}


id: PBO:0029380
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_stress","termid":"PBO:0029380"}


id: PBO:0003398
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Activating Protein","termid":"PBO:0003398"}


id: PBO:0064759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPIC antisense RNA 1","termid":"PBO:0064759"}


id: GO:1905403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of activated CD8-positive, alpha-beta T cell apoptotic process.","definition_xrefs":["PMID:24187568","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell apoptotic process","termid":"GO:0070233"},{"relation_name":"is_a","term_name":"regulation of activated CD8-positive, alpha-beta T cell apoptotic process","termid":"GO:1905402"},{"relation_name":"negatively_regulates","term_name":"activated CD8-positive, alpha-beta T cell apoptotic process","termid":"GO:1905397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of activated CD8-positive, alpha-beta T cell apoptotic process","synonyms":[{"name":"down regulation of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"down regulation of activated CD8-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"down regulation of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"down regulation of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"down regulation of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"down regulation of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"down regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"down regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"down-regulation of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"down-regulation of activated CD8-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"down-regulation of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"down-regulation of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"down-regulation of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"down-regulation of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"down-regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"down-regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"downregulation of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"downregulation of activated CD8-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"downregulation of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"downregulation of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"downregulation of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"downregulation of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"downregulation of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"downregulation of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"inhibition of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"inhibition of activated CD8-positive, alpha-beta T cell apoptotic process","type":"narrow"},{"name":"inhibition of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"inhibition of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"narrow"},{"name":"inhibition of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"inhibition of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"narrow"},{"name":"inhibition of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"inhibition of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"narrow"},{"name":"negative regulation of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"negative regulation of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"negative regulation of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"negative regulation of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"negative regulation of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"negative regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"negative regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"}],"termid":"GO:1905403"}


id: PBO:0001168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO deconjugating cysteine peptidase Ulp2 (predicted)","termid":"PBO:0001168"}


id: MONDO:0015373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Saldino-Mainzer syndrome (obsolete MONDO:0015373)","termid":"MONDO:0015373","xrefs":{"Monarch":{"xref_id":"0015373"}}}


id: GO:0000250
data:
  {"annotated_genes":["SJAG_00624"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75703],"is_not":false,"summary":null,"term":"GO:0000250"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2,3-epoxysqualene = lanosterol. This is a cyclization reaction that forms the sterol nucleus.","definition_xrefs":["EC:5.4.99.7","RHEA:14621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidosqualene cyclase activity","termid":"GO:0031559"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"lanosterol synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R03199","MetaCyc:LANOSTEROL-SYNTHASE-RXN","Reactome:R-HSA-191366"],"synonyms":[{"name":"(S)-2,3-epoxysqualene mutase (cyclizing, lanosterol-forming)","type":"related"},{"name":"2,3-epoxysqualene lanosterol cyclase activity","type":"related"},{"name":"2,3-epoxysqualene--lanosterol cyclase activity","type":"related"},{"name":"2,3-epoxysqualene-lanosterol cyclase activity","type":"exact"},{"name":"2,3-oxidosqualene sterol cyclase activity","type":"broad"},{"name":"2,3-oxidosqualene-lanosterol cyclase activity","type":"related"},{"name":"OSC","type":"exact"},{"name":"lanosterol 2,3-oxidosqualene cyclase activity","type":"related"},{"name":"oxidosqualene--lanosterol cyclase activity","type":"related"},{"name":"oxidosqualene-lanosterol cyclase activity","type":"exact"},{"name":"oxidosqualene:lanosterol cyclase activity","type":"exact"},{"name":"squalene 2,3-epoxide:lanosterol cyclase activity","type":"related"},{"name":"squalene epoxidase-cyclase activity","type":"broad"},{"name":"squalene-2,3-oxide-lanosterol cyclase activity","type":"related"}],"termid":"GO:0000250","terms_by_termid":{"GO:0000250":null}}


id: FYPO:0002206
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which none of the cells in a population of spores are viable, and all have a larger volume than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal. Inviable spores do not germinate.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable swollen spore population (obsolete FYPO:0002206)","synonyms":[{"name":"inviable enlarged spore population","type":"related"},{"name":"inviable large spore population","type":"related"},{"name":"inviable population of swollen spores","type":"exact"},{"name":"inviable spore population with increased cell size","type":"related"},{"name":"inviable spore population with increased cell volume","type":"exact"}],"termid":"FYPO:0002206"}


id: MONDO:0010376
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Brooks-Wisniewski-brown syndrome (obsolete MONDO:0010376)","termid":"MONDO:0010376","xrefs":{"Monarch":{"xref_id":"0010376"}}}


id: PBO:0031855
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-haplosufficient","termid":"PBO:0031855"}


id: PBO:0057046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 135a-1","termid":"PBO:0057046"}


id: GO:0030921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The oxidation of the C alpha-C beta bond of peptidyl-tyrosine to form peptidyl-(Z)-2,3-didehydrotyrosine coupled with cyclization of neighboring residues.","definition_xrefs":["PMID:9631087","RESID:AA0183"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-tyrosine dehydrogenation to form (Z)-2,3-didehydrotyrosine (obsolete GO:0030921)","termid":"GO:0030921"}


id: GO:0006125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_electron_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete thioredoxin pathway (obsolete GO:0006125)","synonyms":[{"name":"thioredoxin pathway","type":"exact"},{"name":"thioredoxin reduction","type":"narrow"}],"termid":"GO:0006125"}


id: GO:0003078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate, or extent of natriuresis, the process of renal sodium excretion.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of natriuresis (obsolete GO:0003078)","synonyms":[{"name":"regulation of natriuresis","type":"exact"}],"termid":"GO:0003078"}


id: PBO:0063339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferating cell nuclear antigen pseudogene 4","termid":"PBO:0063339"}


id: MOD:00025
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to L-serine.","definition_xrefs":["RESID:AA0016","PubMed:4399050","DeltaMass:0","PubMed:6692818","ChEBI:29999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-serine residue","synonyms":[{"name":"(2S)-2-amino-3-hydroxypropanoic acid","type":"exact"},{"name":"2-azanyl-3-hydroxypropanoic acid","type":"exact"},{"name":"3-hydroxy-L-alanine","type":"exact"},{"name":"L-serine","type":"exact"},{"name":"Ser","type":"exact"},{"name":"alpha-amino-beta-hydroxypropionic acid","type":"exact"},{"name":"beta-hydroxyalanine","type":"exact"}],"termid":"MOD:00025"}


id: PBO:0111909
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repxeat protein","termid":"PBO:0111909"}


id: MONDO:0001526
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm that affects the labia minora.","definition_xrefs":["NCIT:C7637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulva cancer","termid":"MONDO:0001528"},{"relation_name":"is_a","term_name":"skin cancer","termid":"MONDO:0002898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"labia minora cancer","secondary_identifiers":["SCTID:363447008","MEDGEN:96921","ICD9:184.2","UMLS:C0496815","ICD10CM:C51.1","DOID:1243"],"synonyms":[{"name":"cancer of labium minora","type":"exact"},{"name":"labium minora cancer","type":"exact"},{"name":"malignant labia minora neoplasm","type":"exact"},{"name":"malignant labia minora tumor","type":"exact"},{"name":"malignant labia minora tumour","type":"exact"},{"name":"malignant labium minora neoplasm","type":"exact"},{"name":"malignant neoplasm of labia minora","type":"exact"},{"name":"malignant neoplasm of labium minora","type":"exact"},{"name":"malignant neoplasm of labium minus","type":"exact"},{"name":"malignant neoplasm of the labia minora","type":"exact"},{"name":"malignant tumor of labia minora","type":"exact"},{"name":"malignant tumor of the labia minora","type":"exact"},{"name":"malignant tumour of labia minora","type":"exact"},{"name":"malignant tumour of the labia minora","type":"exact"}],"termid":"MONDO:0001526","xrefs":{"Monarch":{"xref_id":"0001526"}}}


id: GO:0033623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of integrin activation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"integrin activation","termid":"GO:0033622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"regulation of integrin activation","synonyms":[{"name":"regulation of integrin complex activation","type":"exact"}],"termid":"GO:0033623"}


id: PBO:0050075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxymethylcytosine binding, ES cell specific","termid":"PBO:0050075"}


id: GO:0047457
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: linear alpha-D-glucan = 1,5-anhydro-D-fructose + beta-D-glucose.","definition_xrefs":["MetaCyc:4.2.2.13-RXN","EC:4.2.2.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"exo-(1,4)-alpha-D-glucan lyase activity","synonyms":[{"name":"(1->4)-alpha-D-glucan exo-4-lyase (1,5-anhydro-D-fructose-forming)","type":"related"},{"name":"alpha-(1->4)-glucan 1,5-anhydro-D-fructose eliminase activity","type":"related"},{"name":"alpha-1,4-glucan 1,5-anhydro-D-fructose eliminase activity","type":"related"},{"name":"alpha-1,4-glucan exo-lyase activity","type":"related"},{"name":"alpha-1,4-glucan lyase activity","type":"broad"},{"name":"exo-(1->4)-alpha-D-glucan lyase activity","type":"related"},{"name":"exo-alpha-1,4-glucan lyase activity","type":"related"}],"termid":"GO:0047457"}


id: PATO:0001146
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001146 resistance value (obsolete PATO:0001146)","termid":"PATO:0001146"}


id: MONDO:0957385
data:
  {"annotated_genes":["SJAG_02210"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88131],"is_not":false,"summary":null,"term":"MONDO:0957385"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited dystonia","termid":"MONDO:0044807"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02210":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"dystonia 37, early-onset, with striatal lesions","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060956","OMIM:620427","MEDGEN:1841228","UMLS:C5830592"],"termid":"MONDO:0957385","terms_by_termid":{"MONDO:0957385":null},"xrefs":{"Monarch":{"xref_id":"0957385"}}}


id: PBO:0049953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxia inducible factor 3 subunit alpha","termid":"PBO:0049953"}


id: GO:0010368
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex whose composition varies amongst species; in rice it probably exists in a homo-tetramer to homo-hexamer form and in Gram negative bacteria as a dimer. Functions in the hydrolysis of alpha-(1,6)-D-glucosidic branch linkages. Isoamylases in plants are intracellular and probably chloroplast localized.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoamylase complex","termid":"GO:0043033"},{"relation_name":"part_of","term_name":"chloroplast","termid":"GO:0009507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"chloroplast isoamylase complex","termid":"GO:0010368"}


id: _global:has_functional_parent
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"'Entity A' has_functional_parent 'Entity B' implies that 'Entity B' has at least one chacteristic group from which 'Entity A' can be derived by functional modification.","definition_xrefs":["PubMed:18688235"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_functional_parent","termid":"_global:has_functional_parent"}


id: PBO:0041695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium homeostasis modulator 1","termid":"PBO:0041695"}


id: GO:0061955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate or extent of actin depolymerization as part of the acrosome reaction. This allows the acrosomal membrane and plasma membrane to fuse.","definition_xrefs":["PMID:20937821"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of actin filament depolymerization involved in acrosome reaction (obsolete GO:0061955)","termid":"GO:0061955"}


id: GO:0034954
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: diphenyl ether + O2 = 2,3-dihydroxydiphenyl ether.","definition_xrefs":["UM-BBD_reactionID:r1450"],"gene_count":0,"genotype_count":0,"name":"obsolete diphenyl ether 2,3-dioxygenase activity (obsolete GO:0034954)","termid":"GO:0034954"}


id: PBO:0058825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8055","termid":"PBO:0058825"}


id: MONDO:0008701
data:
  {"annotated_genes":["SJAG_04528"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87716],"is_not":false,"summary":null,"term":"MONDO:0008701"}]},"cv_name":"mondo","definition":"Achondrogenesis type 1A (ACG1A), a form of achondrogenesis, is a very rare, lethal skeletal dysplasia characterized by dwarfism with extremely short limbs, narrow chest, short ribs that are easily fractured, soft skull bones and distinctive histological features of the cartilage.","definition_xrefs":["Orphanet:93299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"achondrogenesis","termid":"MONDO:0019648"},{"relation_name":"is_a","term_name":"severe spondylodysplastic dysplasia","termid":"MONDO:0800080"},{"relation_name":"is_a","term_name":"TRIP11-related skeletal dysplasia","termid":"MONDO:1040009"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04528":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"achondrogenesis type IA","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080054","SCTID:42725006","GARD:459","ICD9:756.9","OMIM:200600","MEDGEN:78546","MESH:C536015","UMLS:C0265273"],"synonyms":[{"name":"ACG1A","type":"related"},{"name":"Houston-Harris achondrogenesis","type":"related"},{"name":"achondrogenesis Houston-Harris type","type":"exact"},{"name":"achondrogenesis type 1A","type":"related"},{"name":"achondrogenesis, Houston-Harris type","type":"exact"},{"name":"achondrogenesis, type 1A","type":"related"},{"name":"achondrogenesis, type IA","type":"related"}],"termid":"MONDO:0008701","terms_by_termid":{"MONDO:0008701":null},"xrefs":{"Monarch":{"xref_id":"0008701"}}}


id: PBO:0077462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM184C divergent transcript","termid":"PBO:0077462"}


id: GO:0033301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A mitotic cell cycle in which mitosis is completed but cytokinesis does not occur, resulting in a cell containing multiple nuclei each with a chromosomal complement of the original ploidy (usually 2N).","definition_xrefs":["GOC:mah","GOC:expert_vm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle","termid":"GO:0000278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"cell cycle comprising mitosis without cytokinesis","termid":"GO:0033301"}


id: MONDO:0024378
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A circadian sleep disorder characterized by bedtime and wake-up time much earlier than normal, although sleep quality is normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"circadian rhythm sleep disorder","termid":"MONDO:0024361"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circadian rhythm sleep disorder, advanced sleep phase type","secondary_identifiers":["SCTID:31537005","UMLS:C0751758","MEDGEN:199728","ICD10CM:G47.22","ICD9:327.32"],"synonyms":[{"name":"ASPS","type":"broad"},{"name":"advanced sleep phase syndrome","type":"broad"},{"name":"circadian rhythm sleep disorder, advanced sleep phase","type":"related"},{"name":"circadian rhythm sleep disorder, advanced sleep phase type","type":"exact"},{"name":"sleep-wake schedule disorder, advanced phase type","type":"exact"}],"termid":"MONDO:0024378","xrefs":{"Monarch":{"xref_id":"0024378"}}}


id: FYECO:0000352
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which aminolevulinic acid was added to the medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ aminolevulinic acid","secondary_identifiers":["PMID:29549126"],"synonyms":[{"name":"+ ALA","type":"exact"}],"termid":"FYECO:0000352"}


id: GO:0016781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of two phosphate groups from a donor, such as ATP, to two different acceptors.","definition_xrefs":["EC:2.7.9.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring phosphorus-containing groups","termid":"GO:0016772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"phosphotransferase activity, paired acceptors","termid":"GO:0016781"}


id: PBO:0081591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 517","termid":"PBO:0081591"}


id: PR:C6Y4A9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23D3.17 gene.","definition_xrefs":["UniProtKB:C6Y4A9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23D3.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23D3.17","synonyms":[{"name":"Spom972h-SPAC23D3.17","type":"exact"}],"termid":"PR:C6Y4A9"}


id: PBO:0029002
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_histone_H3_at_centromere_inner_repeat","termid":"PBO:0029002"}


id: MONDO:0020207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare isolated myopia is a rare, genetic, refraction anomaly disorder characterized by non-syndromic severe myopia, which may be associated with cataract and vitreoretinal degeneration (retinal detachment) that may lead to blindness.","definition_xrefs":["Orphanet:98619"],"gene_count":0,"genotype_count":0,"name":"obsolete rare isolated myopia (obsolete MONDO:0020207)","termid":"MONDO:0020207","xrefs":{"Monarch":{"xref_id":"0020207"}}}


id: GO:0080088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of spermidine hydroxycinnamate conjugates.","definition_xrefs":["PMID:19077165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermidine hydroxycinnamate conjugate biosynthetic process","termid":"GO:0080088"}


id: PBO:0084005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycerophosphocholine (GroPCho) phosphodiesterase; hydrolyzes GroPCho to choline and glycerolphosphate, for use as a phosphate source and as a precursor for phosphocholine synthesis; may interact with ribosomes","termid":"PBO:0084005"}


id: MONDO:0011776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic Infantile Neurological, Cutaneous, and Articular (CINCA) syndrome is characterized by skin rash, joint involvement, chronic meningitis with granulocytes and, in some cases, sensorineural hearing loss and ocular signs.","definition_xrefs":["Orphanet:1451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder","termid":"MONDO:0002081"},{"relation_name":"is_a","term_name":"cryopyrin-associated periodic syndrome","termid":"MONDO:0016168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"CINCA syndrome","secondary_identifiers":["NCIT:C116380","GARD:1356","NANDO:1200468","NORD:1496","MEDGEN:98370","SCTID:239826001","DOID:0090029","UMLS:C0409818","ICD9:759.89","NANDO:2201066","OMIM:607115"],"synonyms":[{"name":"CINCA","type":"related"},{"name":"CINCA syndrome","type":"exact"},{"name":"CINCA/NOMID","type":"exact"},{"name":"Cryopyrin-associated periodic syndrome 3","type":"related"},{"name":"IOMID","type":"related"},{"name":"IOMID syndrome","type":"exact"},{"name":"NOMID","type":"exact"},{"name":"NOMID syndrome","type":"exact"},{"name":"Neonatal-Onset Multisystem Inflammatory Disease","type":"exact"},{"name":"Prieur Griscelli syndrome","type":"related"},{"name":"Prieur-Griscelli syndrome","type":"exact"},{"name":"chronic infantile neurological cutaneous and articular syndrome","type":"exact"},{"name":"chronic infantile neurological cutaneous articular syndrome","type":"exact"},{"name":"chronic neurologic cutaneous and articular syndrome","type":"exact"},{"name":"cryopyrin-associated periodic syndrome 3","type":"exact"},{"name":"infantile onset multisystem inflammatory disease","type":"related"},{"name":"infantile-onset multisystem inflammatory disease","type":"exact"},{"name":"multisystem inflammatory disease, neonatal-onset","type":"related"},{"name":"neonatal onset multisystem inflammatory disease","type":"related"},{"name":"neonatal-onset multisystem inflammatory disease","type":"exact"}],"termid":"MONDO:0011776","xrefs":{"Monarch":{"xref_id":"0011776"}}}


id: PBO:0025488
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"citrullinaemia type I","termid":"PBO:0025488"}


id: PBO:0030547
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_valine_import","termid":"PBO:0030547"}


id: FYPO:0006639
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has a normal diameter (thickness; width).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell size","termid":"FYPO:0001124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal vegetative cell diameter","synonyms":[{"name":"normal cell diameter during vegetative growth","type":"exact"},{"name":"normal vegetative cell diameter during mitotic cell cycle","type":"related"},{"name":"normal vegetative cell thickness","type":"exact"},{"name":"normal vegetative cell width","type":"exact"}],"termid":"FYPO:0006639"}


id: PBO:0058634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6766","termid":"PBO:0058634"}


id: PBO:0041906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cbl proto-oncogene B","termid":"PBO:0041906"}


id: GO:0061843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The tissue remodeling process by which the Sertoli cell barrier is temporarily disrupted and reorganized to accommodate the transit of preleptotene spermatocytes at stage VIII of the epithelial cycle.","definition_xrefs":["PMID:20534520","PMID:24467744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue remodeling","termid":"GO:0048771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Sertoli cell barrier remodeling","synonyms":[{"name":"SCB remodeling","type":"exact"},{"name":"Sertoli cell barrier remodelling","type":"exact"},{"name":"Sertoli cell barrier restructuring","type":"exact"},{"name":"blood testis barrier restructuring","type":"broad"},{"name":"restructuring of BTB","type":"broad"},{"name":"restructuring of SCB","type":"exact"},{"name":"restructuring of blood-testis barrier","type":"broad"}],"termid":"GO:0061843"}


id: PBO:0003316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double-strand-specific ribonuclease Pac1","termid":"PBO:0003316"}


id: MONDO:1010762
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Protoporphyria that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protoporphyria, non-human animal","termid":"MONDO:1010135"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protoporphyria, cattle","secondary_identifiers":["OMIA:000836-9913"],"termid":"MONDO:1010762","xrefs":{"Monarch":{"xref_id":"1010762"}}}


id: PBO:0090283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shelterin complex HEAT repeat subunit Ccq1","termid":"PBO:0090283"}


id: GO:0043596
data:
  {"annotated_genes":["SJAG_05239","SJAG_01823","SJAG_00863","SJAG_00272","SJAG_02800","SJAG_00814","SJAG_03097","SJAG_00198","SJAG_00696","SJAG_02627","SJAG_03898","SJAG_00618","SJAG_04150","SJAG_02348","SJAG_02439","SJAG_02667","SJAG_00857","SJAG_04190","SJAG_02610","SJAG_02908","SJAG_03128","SJAG_02172","SJAG_04183","SJAG_02074","SJAG_00874","SJAG_05197","SJAG_02394","SJAG_03451","SJAG_00884","SJAG_03855","SJAG_03927","SJAG_00611","SJAG_00399","SJAG_01010","SJAG_02818","SJAG_03722","SJAG_02182","SJAG_00729","SJAG_00153","SJAG_02198","SJAG_04671","SJAG_00958","SJAG_01698","SJAG_04210","SJAG_01354","SJAG_05232","SJAG_00327","SJAG_04272","SJAG_03780","SJAG_04995","SJAG_05301","SJAG_02724","SJAG_04994","SJAG_00536","SJAG_01267","SJAG_04877","SJAG_04879","SJAG_04791","SJAG_01762","SJAG_03495"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[57269,58640,61801,61859,63644,67338,75605,79251,92252,92473,94369,94800,96641,96882,97820,99131,101114,101231,102425,104696,105139,105801,105968,106037,109177,109560,109668,109886,111784,113119,113237,113494,113751,114594,115010,115031,115421,117262,120052],"is_not":false,"summary":null,"term":"GO:0043596"},{"annotations":[72132,74688,76600,76987],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005658"},{"annotations":[72734,78622,76823,104645],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043625"},{"annotations":[82029,78946,118106],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005662"},{"annotations":[114682,70497,74390,78848,79533,78214],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043599"},{"annotations":[114363],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043601"},{"annotations":[79998,101169,82119],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031298"}]},"cv_name":"cellular_component","definition":"The Y-shaped region of a nuclear replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes.","definition_xrefs":["GOC:mtg_sensu","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replication fork","termid":"GO:0005657"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"}],"gene_count":60,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00198":null,"SJAG_00272":null,"SJAG_00327":null,"SJAG_00399":null,"SJAG_00536":null,"SJAG_00611":null,"SJAG_00618":null,"SJAG_00696":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00857":null,"SJAG_00863":null,"SJAG_00874":null,"SJAG_00884":null,"SJAG_00958":null,"SJAG_01010":null,"SJAG_01267":null,"SJAG_01354":null,"SJAG_01698":null,"SJAG_01762":null,"SJAG_01823":null,"SJAG_02074":null,"SJAG_02172":null,"SJAG_02182":null,"SJAG_02198":null,"SJAG_02348":null,"SJAG_02394":null,"SJAG_02439":null,"SJAG_02610":null,"SJAG_02627":null,"SJAG_02667":null,"SJAG_02724":null,"SJAG_02800":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_03097":null,"SJAG_03128":null,"SJAG_03451":null,"SJAG_03495":null,"SJAG_03722":null,"SJAG_03780":null,"SJAG_03855":null,"SJAG_03898":null,"SJAG_03927":null,"SJAG_04150":null,"SJAG_04183":null,"SJAG_04190":null,"SJAG_04210":null,"SJAG_04272":null,"SJAG_04671":null,"SJAG_04791":null,"SJAG_04877":null,"SJAG_04879":null,"SJAG_04994":null,"SJAG_04995":null,"SJAG_05197":null,"SJAG_05232":null,"SJAG_05239":null,"SJAG_05301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0005634"],"is_obsolete":false,"name":"nuclear replication fork","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0043596","terms_by_termid":{"GO:0005658":null,"GO:0005662":null,"GO:0031298":null,"GO:0043596":null,"GO:0043599":null,"GO:0043601":null,"GO:0043625":null}}


id: GO:0021939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates the transfer of information from the extracellular matrix to granule cell precursors resulting in a decrease in rate of granule cell precursor cell proliferation.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:dph","GOC:jid","PMID:15157725","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix-cell signaling","termid":"GO:0035426"},{"relation_name":"part_of","term_name":"negative regulation of cerebellar granule cell precursor proliferation","termid":"GO:0021941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"extracellular matrix-granule cell signaling involved in regulation of granule cell precursor proliferation","synonyms":[{"name":"extracellular matrix-granule cell signalling involved in regulation of granule cell precursor proliferation","type":"exact"}],"termid":"GO:0021939"}


id: PBO:0077214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 9 superfamily member 5, pseudogene","termid":"PBO:0077214"}


id: PBO:0044514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CXXC motif containing zinc binding protein","termid":"PBO:0044514"}


id: PBO:0078749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 10C, mitochondrial RNase P subunit","termid":"PBO:0078749"}


id: GO:0001079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription regulation process in which the presence of one nitrogen source leads to the modulation of the frequency, rate, or extent of transcription, from an RNA polymerase II promoter, of specific genes involved in the metabolism of other nitrogen sources.","definition_xrefs":["PMID:19104072","GOC:mah","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase II","termid":"GO:0006357"},{"relation_name":"is_a","term_name":"nitrogen catabolite regulation of transcription","termid":"GO:0090293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006355","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"nitrogen catabolite regulation of transcription from RNA polymerase II promoter","synonyms":[{"name":"regulation of transcription from RNA polymerase II promoter by nitrogen catabolites","type":"exact"}],"termid":"GO:0001079"}


id: PBO:0068721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 10, pseudogene","termid":"PBO:0068721"}


id: RO:HOM0000027
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Iterative homology that involves structures arranged along the main body axis.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_iterative_homology_relationship_with","termid":"RO:HOM0000066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_serial_homology_relationship_with","synonyms":[{"name":"homonomy","type":"related"},{"name":"serial homologous to","type":"exact"}],"termid":"RO:HOM0000027"}


id: PBO:0043228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiotrophin like cytokine factor 1","termid":"PBO:0043228"}


id: MONDO:0023250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital sucrase-isomaltase deficiency","termid":"MONDO:0009114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"global disaccharide intolerance","secondary_identifiers":["GARD:8386"],"termid":"MONDO:0023250","xrefs":{"Monarch":{"xref_id":"0023250"}}}


id: PBO:0038544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 16A, phospholipase","termid":"PBO:0038544"}


id: GO:0047548
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-methyleneglutarate = 2-methylene-3-methylsuccinate.","definition_xrefs":["EC:5.4.99.4","RHEA:13793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-methyleneglutarate mutase activity","secondary_identifiers":["MetaCyc:2-METHYLENEGLUTARATE-MUTASE-RXN","KEGG_REACTION:R03908"],"synonyms":[{"name":"2-methyleneglutarate carboxy-methylenemethylmutase activity","type":"related"},{"name":"alpha-methyleneglutarate mutase activity","type":"related"}],"termid":"GO:0047548"}


id: GO:0046843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the dorsal filaments, elaborate specializations of the chorion that protrude from the anterior end of the egg and facilitate embryonic respiration.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"egg chorion assembly","termid":"GO:0007306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"dorsal appendage formation","termid":"GO:0046843"}


id: GO:2000311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of AMPA selective glutamate receptor activity.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"regulation of neurotransmitter receptor activity","termid":"GO:0099601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052","GO:0055085"],"is_obsolete":false,"name":"regulation of AMPA receptor activity","synonyms":[{"name":"regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity","type":"exact"}],"termid":"GO:2000311"}


id: GO:0071342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the process in which a contractile ring is assembled in a specific location that contributes to cytokinesis during cell cycle.","definition_xrefs":["GOC:mah","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of establishment of actomyosin contractile ring localization (obsolete GO:0071342)","termid":"GO:0071342"}


id: GO:0075066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of symbiont, or the progression of the symbiont from an initial condition to a later condition, occurring in its host's organelle. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete growth or development of symbiont in host organelle (obsolete GO:0075066)","synonyms":[{"name":"growth or development of symbiont in host organelle","type":"exact"}],"termid":"GO:0075066"}


id: PBO:0068461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 38, pseudogene","termid":"PBO:0068461"}


id: MOD:00891
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to D-serine.","definition_xrefs":["ChEBI:29998","PubMed:7973665","RESID:AA0195","PubMed:6893271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-serine","synonyms":[{"name":"(R)-2-amino-3-hydroxypropanoic acid","type":"exact"},{"name":"D-Ser","type":"exact"},{"name":"D-serine","type":"exact"}],"termid":"MOD:00891"}


id: MONDO:0859207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia and gross motor and speech delay","secondary_identifiers":["OMIM:619639","UMLS:C5562031","MEDGEN:1794241"],"termid":"MONDO:0859207","xrefs":{"Monarch":{"xref_id":"0859207"}}}


id: FYPO:0005480
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular response to arsenite ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during cellular hyperosmotic response","termid":"FYPO:0001265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0002494","FYPO:0001320","FYPO:0002274"],"is_obsolete":false,"name":"increased protein phosphorylation during cellular response to arsenite ion","synonyms":[{"name":"increased protein phosphorylation during cellular response to arsenite","type":"exact"},{"name":"increased protein phosphorylation during cellular response to arsenite ion during mitotic cell cycle","type":"related"},{"name":"increased protein phosphorylation during cellular response to arsenite ion during vegetative growth","type":"exact"}],"termid":"FYPO:0005480"}


id: GO:0007350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hierarchical steps resulting in the progressive subdivision of the anterior/posterior axis of the embryo.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic pattern specification","termid":"GO:0009880"},{"relation_name":"is_a","term_name":"segmentation","termid":"GO:0035282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blastoderm segmentation","termid":"GO:0007350"}


id: MONDO:1011724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder, non-human animal","termid":"MONDO:0700106"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunodeficiency disease, non-human animal","secondary_identifiers":["OMIA:000550"],"termid":"MONDO:1011724","xrefs":{"Monarch":{"xref_id":"1011724"}}}


id: PBO:0112982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5' to 3' exonuclease, 5' flap endonuclease; required for Okazaki fragment processing and maturation, for long-patch base-excision repair and large loop repair (LLR), ribonucleotide excision repair; cleaves off RNA flap in a RNA:DNA hybrid intermediate during processing of DNA lagging strand; relocalizes to the cytosol in response to hypoxia; member of the S. pombe RAD2/FEN1 family","termid":"PBO:0112982"}


id: GO:0032276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of a gonadotropin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endocrine process","termid":"GO:0044060"},{"relation_name":"is_a","term_name":"regulation of hormone secretion","termid":"GO:0046883"},{"relation_name":"regulates","term_name":"gonadotropin secretion","termid":"GO:0032274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"regulation of gonadotropin secretion","synonyms":[{"name":"regulation of gonadotrophin secretion","type":"exact"}],"termid":"GO:0032276"}


id: GO:0061582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of an intestinal epithelial cell from one site to another, often during the development of a multicellular organism.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration","termid":"GO:0010631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal epithelial cell migration","termid":"GO:0061582"}


id: PBO:0075298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sine oculis binding protein homolog","termid":"PBO:0075298"}


id: GO:0061465
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The part of the plasma membrane that contributes to the structure of a hemidesmosome.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane part of hemidesmosome (obsolete GO:0061465)","termid":"GO:0061465"}


id: GO:0006911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis.","definition_xrefs":["GOC:curators","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane invagination","termid":"GO:0099024"},{"relation_name":"part_of","term_name":"phagocytosis","termid":"GO:0006909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"phagocytosis, engulfment","synonyms":[{"name":"phagosome biosynthesis","type":"related"},{"name":"phagosome formation","type":"related"}],"termid":"GO:0006911"}


id: MONDO:0800127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare hereditary amyloidosis that incorporates deposition of amyloid microfibril material in the lung parenchyma.","definition_xrefs":["PMID:29038189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary amyloidosis","termid":"MONDO:0018634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0021179","MONDO:0005066"],"is_obsolete":false,"name":"pulmonary amyloidosis","secondary_identifiers":["UMLS:C0700376","MEDGEN:675153"],"termid":"MONDO:0800127","xrefs":{"Monarch":{"xref_id":"0800127"}}}


id: MONDO:0043254
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"urticaria","termid":"MONDO:0005492"},{"relation_name":"is_a","term_name":"vesiculobullous skin disease","termid":"MONDO:0006617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"papular urticaria","secondary_identifiers":["MEDGEN:78091","icd11.foundation:1014677494","MESH:C537169","SCTID:55608001","UMLS:C0263352"],"synonyms":[{"name":"bullous papular urticaria - type","type":"related"},{"name":"lichen urticatus","type":"related"},{"name":"papular urticaria","type":"exact"},{"name":"prurigo simplex","type":"exact"},{"name":"strophulus","type":"related"},{"name":"urticaria papulosa of hebra","type":"related"}],"termid":"MONDO:0043254","xrefs":{"Monarch":{"xref_id":"0043254"}}}


id: MONDO:0002965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cyst (cysts) near the ovary, derived from anomalies of the fallopian tubes or the broad ligament. The paramesonephric type consists of ciliated cells similar to the oviduct epithelium. The mesonephric type consisted of an epithelium with minimally surface structures. They can be found on the thin oviduct (paratubal cysts) or near its fimbriated end (hydatid of Morgagni).","definition_xrefs":["MESH:D010310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic cyst of fallopian tube","termid":"MONDO:0024652"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parovarian cyst","secondary_identifiers":["DOID:4333","SCTID:64233004","UMLS:C0030584","MEDGEN:14622"],"synonyms":[{"name":"Morgagni Hydatids","type":"related"},{"name":"Morgagni hydatid","type":"related"},{"name":"Morgagni hydatid cyst","type":"related"},{"name":"Morgagni hydatid cysts","type":"related"},{"name":"Paratubal cyst","type":"related"},{"name":"Paratubal cysts","type":"related"},{"name":"cyst, Paratubal","type":"related"},{"name":"cyst, fimbrial","type":"exact"},{"name":"cyst, parovarian","type":"related"},{"name":"cysts, Paratubal","type":"related"},{"name":"cysts, parovarian","type":"related"},{"name":"embryonic fimbrial cyst","type":"exact"},{"name":"fimbrial cyst","type":"related"},{"name":"hydatid cyst of Morgagni","type":"related"},{"name":"hydatid of Morgagni","type":"related"},{"name":"parovarian cyst","type":"exact"},{"name":"parovarian cysts","type":"related"}],"termid":"MONDO:0002965","xrefs":{"Monarch":{"xref_id":"0002965"}}}


id: MONDO:0010454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 88","secondary_identifiers":["UMLS:C3275444","MEDGEN:477075","GARD:22692","OMIM:300852","DOID:0112053"],"synonyms":[{"name":"MRX88","type":"exact"},{"name":"intellectual disability, X-linked 88","type":"exact"},{"name":"intellectual disability, XMEN-linked 88","type":"exact"},{"name":"mental retardation, X-linked 88","type":"exact"}],"termid":"MONDO:0010454","xrefs":{"Monarch":{"xref_id":"0010454"}}}


id: PBO:0034537
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-meiotic_cell_cycle_checkpoint_phenotype","termid":"PBO:0034537"}


id: MONDO:0016711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A histological variant of medulloblastoma, an embryonic malignancy, often located in one of the cerebellar hemispheres, occurring most frequently in adults and manifesting with symptoms such as vomiting and headache.","definition_xrefs":["Orphanet:251863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medulloblastoma","termid":"MONDO:0007959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desmoplastic/nodular medulloblastoma","secondary_identifiers":["UMLS:C0751291","ONCOTREE:DMBL","GARD:17215","NCIT:C4956","ICDO:9471/3","MEDGEN:148272"],"synonyms":[{"name":"Desmoplastic medulloblastoma","type":"exact"},{"name":"desmoplastic medulloblastoma","type":"exact"},{"name":"desmoplastic nodular medulloblastoma","type":"exact"},{"name":"desmoplastic/nodular medulloblastoma","type":"exact"}],"termid":"MONDO:0016711","xrefs":{"Monarch":{"xref_id":"0016711"}}}


id: SO:0001001
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cytosolic 23S rRNA is an RNA component of the large subunit of cytosolic ribosomes in prokaryotes.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"cytosolic_rRNA_23S_gene","termid":"SO:0002243"},{"relation_name":"is_a","term_name":"cytosolic_LSU_rRNA","termid":"SO:0000651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_23S_rRNA","synonyms":[{"name":"cytosolic 23S LSU rRNA","type":"exact"},{"name":"cytosolic 23S rRNA","type":"exact"},{"name":"cytosolic 23S ribosomal RNA","type":"related"},{"name":"cytosolic rRNA 23S","type":"exact"}],"termid":"SO:0001001"}


id: PBO:0066031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN guanine nucleotide release factor","termid":"PBO:0066031"}


id: PBO:0045458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DR1 associated protein 1","termid":"PBO:0045458"}


id: MONDO:0010987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive nonsyndromic deafness that has material basis in mutation in the TMPRSS3 gene on chromosome 21q22.","definition_xrefs":["PMID:11137999","DOID:0110527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 8","secondary_identifiers":["OMIM:601072","UMLS:C1832827","GARD:22589","MEDGEN:322046"],"synonyms":[{"name":"DFNB10","type":"narrow"},{"name":"DFNB8","type":"narrow"},{"name":"NRSD8","type":"narrow"},{"name":"autosomal recessive deafness 10","type":"narrow"},{"name":"autosomal recessive deafness 8","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 8","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 8","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 8","type":"exact"},{"name":"childhood-onset neurosensory autosomal recessive deafness 8","type":"narrow"},{"name":"deafness, autosomal recessive 10","type":"narrow"},{"name":"deafness, autosomal recessive 8","type":"narrow"},{"name":"deafness, autosomal recessive 8/10","type":"narrow"},{"name":"deafness, autosomal recessive type 8","type":"narrow"},{"name":"deafness, childhood-onset neurosensory, autosomal recessive 8","type":"narrow"},{"name":"neurosensory nonsyndromic recessive deafness 8","type":"narrow"}],"termid":"MONDO:0010987","xrefs":{"Monarch":{"xref_id":"0010987"}}}


id: PBO:0110570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone demethylase, Jmjc domain Epe1","termid":"PBO:0110570"}


id: MONDO:0017517
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic brachydactyly of toes","termid":"MONDO:0017452"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly of toes, unilateral","secondary_identifiers":["icd11.foundation:714196201","Orphanet:295132"],"synonyms":[{"name":"short toes, unilateral","type":"exact"}],"termid":"MONDO:0017517","xrefs":{"Monarch":{"xref_id":"0017517"}}}


id: GO:0051885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of timing of anagen, the growth phase of the hair cycle.","definition_xrefs":["GOC:pr","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hair follicle maturation","termid":"GO:0048818"},{"relation_name":"is_a","term_name":"regulation of timing of anagen","termid":"GO:0051884"},{"relation_name":"positively_regulates","term_name":"anagen","termid":"GO:0042640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of timing of anagen","synonyms":[{"name":"activation of anagen","type":"narrow"},{"name":"positive regulation of anagen","type":"related"},{"name":"stimulation of anagen","type":"narrow"},{"name":"up regulation of anagen","type":"related"},{"name":"up-regulation of anagen","type":"related"},{"name":"upregulation of anagen","type":"related"}],"termid":"GO:0051885"}


id: PBO:0089400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic meiotic pumilio family RNA-binding protein Mpf1","termid":"PBO:0089400"}


id: MONDO:0022985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"},{"relation_name":"is_a","term_name":"benign neoplasm of rectum","termid":"MONDO:0021462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"diffuse cavernous hemangioma of the rectum","synonyms":[{"name":"cavernous haemangioma of the rectum","type":"related"}],"termid":"MONDO:0022985","xrefs":{"Monarch":{"xref_id":"0022985"}}}


id: GO:0050593
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-N-methylcoclaurine + H+ + NADPH + O2 = (S)-3'-hydroxy-N-methylcoclaurine + H2O + NADP+.","definition_xrefs":["RHEA:16649","EC:1.14.14.102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"N-methylcoclaurine 3'-monooxygenase activity","secondary_identifiers":["MetaCyc:1.14.13.71-RXN","KEGG_REACTION:R05732"],"synonyms":[{"name":"(S)-N-methylcoclaurine 3'-hydroxylase activity","type":"related"},{"name":"(S)-N-methylcoclaurine,NADPH:oxygen oxidoreductase (3'-hydroxylating)","type":"related"},{"name":"N-methylcoclaurine 3'-hydroxylase activity","type":"exact"},{"name":"cytochrome P450 80B1 activity","type":"related"}],"termid":"GO:0050593"}


id: GO:0019834
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of phospholipase A2.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase inhibitor activity","termid":"GO:0004859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0004857"}],"interesting_parent_ids":["GO:0004857","GO:0003674","GO:0140678","GO:0030234","GO:0098772"],"is_obsolete":false,"name":"phospholipase A2 inhibitor activity","termid":"GO:0019834"}


id: MONDO:0019738
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemolytic uremic syndrome, atypical, susceptibility to, 1","termid":"MONDO:0009335"},{"relation_name":"is_a","term_name":"atypical hemolytic-uremic syndrome","termid":"MONDO:0016244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"atypical hemolytic-uremic syndrome with H factor anomaly","secondary_identifiers":["Orphanet:93579"],"synonyms":[{"name":"D-HUS with H factor anomaly","type":"exact"},{"name":"aHUS with H factor anomaly","type":"exact"},{"name":"atypical HUS with H factor anomaly","type":"exact"},{"name":"hemolytic-uremic syndrome without diarrhea with H factor anomaly","type":"exact"},{"name":"hemolytic-uremic syndrome without diarrhoea with H factor anomaly","type":"exact"}],"termid":"MONDO:0019738","xrefs":{"Monarch":{"xref_id":"0019738"}}}


id: PBO:0089102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S15a","termid":"PBO:0089102"}


id: PBO:0090031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P and RNase MRP subunit Pop8","termid":"PBO:0090031"}


id: PBO:0043073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic alpha 2 subunit","termid":"PBO:0043073"}


id: PATO:0002472
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's decreased rate of change of the position.","definition_xrefs":["PATOC:NV"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"velocity","termid":"PATO:0002242"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased velocity","termid":"PATO:0002472"}


id: PBO:0030238
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_from_CDRE_promoter_in_response_to_calcium_ion","termid":"PBO:0030238"}


id: PBO:0012243
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter contains FLEX elelment","termid":"PBO:0012243"}


id: MONDO:0015664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic pulmonary artery dilatation is a rare developmental defect during embryogenesis characterized by the dilatation of the main pulmonary artery, with or without dilatation of the right and left pulmonary artery branches, and not attributed to any other cardiac, pulmonary and/or arterial wall disease. It may present with exertional dyspnea, fatigue, cough, hemoptysis, palpitation and chest pain, but may also be asymptomatic. In serious cases, trachea constriction due to postural changes may lead to attacks of cyanosis with severe dyspnea. Sudden cardiac death has been reported in some cases.","definition_xrefs":["Orphanet:1676"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of the great arteries","termid":"MONDO:0020292"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic pulmonary artery dilatation","secondary_identifiers":["GARD:6757","MEDGEN:1842555","UMLS:C1384816"],"synonyms":[{"name":"idiopathic dilatation of the pulmonary artery","type":"related"}],"termid":"MONDO:0015664","xrefs":{"Monarch":{"xref_id":"0015664"}}}


id: GO:0140899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a plastid gene's sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.","definition_xrefs":["PMID:28377785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression","termid":"GO:0010467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"plastid gene expression","termid":"GO:0140899"}


id: PBO:0060229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYADM antisense RNA 1","termid":"PBO:0060229"}


id: PBO:0042412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 25B","termid":"PBO:0042412"}


id: PBO:0081379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 219","termid":"PBO:0081379"}


id: PBO:0030712
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_heat_shock","termid":"PBO:0030712"}


id: MONDO:0016511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infectious embryofetopathy","secondary_identifiers":["MEDGEN:1736309","Orphanet:232035","UMLS:C5439342"],"termid":"MONDO:0016511","xrefs":{"Monarch":{"xref_id":"0016511"}}}


id: PATO:0025002
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer being suitable for use as a safe means of hydration.","definition_xrefs":["Wikipedia:https://en.wikipedia.org/wiki/Drinking_water"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potability","termid":"PATO:0025000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potable","synonyms":[{"name":"drinkable","type":"exact"}],"termid":"PATO:0025002"}


id: MONDO:0001773
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or subacute inflammatory process of the central nervous system characterized histologically by multiple foci of perivascular demyelination. Symptom onset usually occurs several days after an acute viral infection or immunization, but it may coincide with the onset of infection or rarely no antecedent event can be identified. Clinical manifestations include confusion, somnolence, fever, nuchal rigidity, and involuntary movements. The illness may progress to coma and eventually be fatal. (Adams et al., Principles of Neurology, 6th ed, p921)","definition_xrefs":["MESH:D004673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"encephalitis","termid":"MONDO:0019956"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-vaccinal encephalitis","secondary_identifiers":["DOID:13664","ICD9:323.51","SCTID:31367003","MEDGEN:152946","UMLS:C0751101"],"synonyms":[{"name":"encephalitis following immunisation procedures","type":"exact"},{"name":"encephalitis following immunization procedures","type":"exact"},{"name":"postvaccinal encephalomyelitis","type":"exact"}],"termid":"MONDO:0001773","xrefs":{"Monarch":{"xref_id":"0001773"}}}


id: PBO:0046175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS transcription factor ELK2B, pseudogene","termid":"PBO:0046175"}


id: PBO:0044962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase/reductase 7B","termid":"PBO:0044962"}


id: GO:0033888
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-deoxy-beta-D-gluc-4-enuronosyl-(1->3)-N-acetyl-D-galactosamine 6-sulfate + H2O = 4-deoxy-beta-D-gluc-4-enuronosyl-(1->3)-N-acetyl-D-galactosamine + H+ + sulfate.","definition_xrefs":["RHEA:10536","EC:3.1.6.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"chondro-6-sulfatase activity","secondary_identifiers":["KEGG_REACTION:R03518","MetaCyc:CHONDRO-6-SULFATASE-RXN"],"synonyms":[{"name":"4-deoxy-beta-D-gluc-4-enuronosyl-(1,3)-N-acetyl-D-galactosamine-6-sulfate 6-sulfohydrolase activity","type":"related"}],"termid":"GO:0033888"}


id: PBO:0060938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFE2L1 divergent transcript","termid":"PBO:0060938"}


id: PBO:0070667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 38","termid":"PBO:0070667"}


id: PBO:0003149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-AN1 type zinc finger protein","termid":"PBO:0003149"}


id: PR:P87236
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug154 gene.","definition_xrefs":["UniProtKB:P87236","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 154 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.11","synonyms":[{"name":"Spom972h-mug154","type":"exact"}],"termid":"PR:P87236"}


id: FYPO:0002018
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain a detectable mitotic spindle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000120","FYPO:0002399","FYPO:0005447"],"is_obsolete":false,"name":"mitotic spindle absent from cell","synonyms":[{"name":"absent mitotic spindle","type":"exact"},{"name":"mitotic spindle absent from cell during vegetative growth","type":"exact"},{"name":"spindle absent from cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002018"}


id: GO:0061070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the female urethra over time from its initial formation to the mature structure. The female urethra is a renal system organ that carries urine from the bladder to outside the body, exiting above the vaginal opening.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urethra development","termid":"GO:0061068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female urethra development","termid":"GO:0061070"}


id: PBO:0013839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"controlled curation, orthologous to S. cerevisiae YIL026C","termid":"PBO:0013839"}


id: GO:0018833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,1,1-trichloro-2,2-bis(4-chlorophenyl)ethane = 1,1-dichloro-2,2-bis(4-chlorophenyl)ethylene + chloride + H+.","definition_xrefs":["RHEA:19217","EC:4.5.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-halide lyase activity","termid":"GO:0016848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"DDT-dehydrochlorinase activity","secondary_identifiers":["MetaCyc:DDT-DEHYDROCHLORINASE-RXN","UM-BBD_reactionID:r0439","KEGG_REACTION:R04522"],"synonyms":[{"name":"1,1,1-trichloro-2,2-bis(4-chlorophenyl)ethane chloride-lyase [1,1-dichloro-2,2-bis(4-chlorophenyl)ethylene-forming]","type":"related"},{"name":"1,1,1-trichloro-2,2-bis(4-chlorophenyl)ethane chloride-lyase activity","type":"related"},{"name":"DDT dehydrochlorinase activity","type":"exact"},{"name":"DDT-as","type":"related"},{"name":"DDT-ase activity","type":"related"},{"name":"DDTase activity","type":"related"}],"termid":"GO:0018833"}


id: GO:2000829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of parathyroid hormone secretion.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hormone secretion","termid":"GO:0046888"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of parathyroid hormone secretion","termid":"GO:2000828"},{"relation_name":"negatively_regulates","term_name":"parathyroid hormone secretion","termid":"GO:0035898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of parathyroid hormone secretion","synonyms":[{"name":"negative regulation of PTH secretion","type":"exact"},{"name":"negative regulation of parathormone secretion","type":"exact"},{"name":"negative regulation of parathyrin secretion","type":"exact"}],"termid":"GO:2000829"}


id: MONDO:0008129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ophthalmoplegia, familial total, with iris transillumination","secondary_identifiers":["MESH:C563499","MEDGEN:371665","UMLS:C1833836","OMIM:165098"],"synonyms":[{"name":"ophthalmoplegia, familial total, with iris transillumination","type":"exact"}],"termid":"MONDO:0008129","xrefs":{"Monarch":{"xref_id":"0008129"}}}


id: PBO:0036073
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_dimethylation_at_centromere_during_vegetative_growth","termid":"PBO:0036073"}


id: MONDO:0011931
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"ovarian cancer","termid":"MONDO:0008170"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian cancer, susceptibility to, 1","secondary_identifiers":["MEDGEN:390836","OMIM:607893","UMLS:C2675601"],"synonyms":[{"name":"OVCAS1","type":"exact"},{"name":"ovarian cancer, susceptibility to","type":"exact"},{"name":"ovarian cancer, susceptibility to, 1","type":"exact"}],"termid":"MONDO:0011931","xrefs":{"Monarch":{"xref_id":"0011931"}}}


id: MONDO:0000240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aspergillosis that is a serious fungal infection of the lung with pneumonia caused by Aspergillus, which spreads to other parts of the body through bloodstream in patients with acute leukemia and recipients of tissue transplants. Clinical symptoms include pulmonary nodules and hemorrhage.","definition_xrefs":["DOID:0050073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary aspergilloma","termid":"MONDO:0000266"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invasive aspergillosis","secondary_identifiers":["MEDGEN:922866","UMLS:C0238013","SCTID:721798004","icd11.foundation:1314810340"],"termid":"MONDO:0000240","xrefs":{"Monarch":{"xref_id":"0000240"}}}


id: GO:1903908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of plasma membrane raft polarization.","definition_xrefs":["GOC:als","GOC:TermGenie","PMID:23575248","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of plasma membrane raft polarization","termid":"GO:1903906"},{"relation_name":"positively_regulates","term_name":"plasma membrane raft polarization","termid":"GO:0044858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"positive regulation of plasma membrane raft polarization","synonyms":[{"name":"activation of plasma membrane raft polarization","type":"narrow"},{"name":"up regulation of plasma membrane raft polarization","type":"exact"},{"name":"up-regulation of plasma membrane raft polarization","type":"exact"},{"name":"upregulation of plasma membrane raft polarization","type":"exact"}],"termid":"GO:1903908"}


id: MONDO:0002666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare pancreatic ductal adenocarcinoma with poor prognosis. It is characterized by the presence of malignant signet ring cells infiltrating the pancreatic parenchyma in an individual cell pattern.","definition_xrefs":["NCIT:C5720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signet ring cell carcinoma","termid":"MONDO:0005092"},{"relation_name":"is_a","term_name":"pancreatic ductal adenocarcinoma","termid":"MONDO:0005184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"pancreatic signet ring cell adenocarcinoma","secondary_identifiers":["UMLS:C1335317","MEDGEN:233834","DOID:3497"],"synonyms":[{"name":"pancreas signet ring cell carcinoma","type":"exact"},{"name":"pancreatic signet Ring cell carcinoma","type":"exact"},{"name":"pancreatic signet ring cell carcinoma","type":"exact"},{"name":"signet Ring cell carcinoma of pancreas","type":"exact"},{"name":"signet Ring cell carcinoma of the pancreas","type":"exact"}],"termid":"MONDO:0002666","xrefs":{"Monarch":{"xref_id":"0002666"}}}


id: PBO:0001814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC transporter Pdr1","termid":"PBO:0001814"}


id: MONDO:0010878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant spastic paraplegia type 6 (SPG6) is a form of hereditary spastic paraplegia which usually presents in late adolescence or early adulthood as a pure phenotype of lower limb spasticity with hyperreflexia and extensor plantar responses, as well as mild bladder disturbances and pes cavus. Rarely, it can present as a complex phenotype with additional manifestations including epilepsy, variable peripheral neuropathy and/or memory impairment.","definition_xrefs":["Orphanet:100988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 6","secondary_identifiers":["DOID:0110811","MESH:C536866","SCTID:732949006","UMLS:C1838192","OMIM:600363","GARD:4928","MEDGEN:324965"],"synonyms":[{"name":"FSP3","type":"exact"},{"name":"NIPA1 hereditary spastic paraplegia","type":"exact"},{"name":"SPG6","type":"exact"},{"name":"autosomal dominant familial spastic paraplegia type 3","type":"exact"},{"name":"autosomal dominant spastic paraplegia 6","type":"exact"},{"name":"autosomal dominant spastic paraplegia type 6","type":"exact"},{"name":"familial spastic paraplegia autosomal dominant 3","type":"related"},{"name":"familial spastic paraplegia, autosomal dominant, 3","type":"related"},{"name":"hereditary spastic paraplegia caused by mutation in NIPA1","type":"exact"},{"name":"hereditary spastic paraplegia type 6","type":"exact"},{"name":"spastic paraplegia 6","type":"related"},{"name":"spastic paraplegia 6, autosomal dominant","type":"related"}],"termid":"MONDO:0010878","xrefs":{"Monarch":{"xref_id":"0010878"}}}


id: GO:0035220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Progression of the wing disc over time, from its initial formation through to its metamorphosis to form adult structures including the wing hinge, wing blade and pleura.","definition_xrefs":["ISBN:0879694238","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc development","termid":"GO:0007444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wing disc development","termid":"GO:0035220"}


id: PBO:0057585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 890","termid":"PBO:0057585"}


id: PBO:0029522
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_normal_volume_septated_spheroid_cells_(obsolete_FYPO:0002192)","termid":"PBO:0029522"}


id: GO:1903915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fusion of virus membrane with host plasma membrane.","definition_xrefs":["PMID:23575248","GOC:TermGenie","GO_REF:0000058","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of viral entry into host cell","termid":"GO:0046598"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of fusion of virus membrane with host plasma membrane","termid":"GO:1903913"},{"relation_name":"positively_regulates","term_name":"fusion of virus membrane with host plasma membrane","termid":"GO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"positive regulation of fusion of virus membrane with host plasma membrane","synonyms":[{"name":"activation of fusion of virus membrane with host plasma membrane","type":"narrow"},{"name":"activation of viral entry into host cell via membrane fusion with the plasma membrane","type":"related"},{"name":"activation of viral envelope fusion with host cell membrane","type":"narrow"},{"name":"activation of viral envelope fusion with host membrane","type":"narrow"},{"name":"activation of viral envelope fusion with host plasma membrane","type":"narrow"},{"name":"activation of viral penetration via membrane fusion","type":"narrow"},{"name":"activation of viral-cell fusion molecule activity","type":"related"},{"name":"positive regulation of viral entry into host cell via membrane fusion with the plasma membrane","type":"related"},{"name":"positive regulation of viral envelope fusion with host cell membrane","type":"exact"},{"name":"positive regulation of viral envelope fusion with host membrane","type":"exact"},{"name":"positive regulation of viral envelope fusion with host plasma membrane","type":"exact"},{"name":"positive regulation of viral penetration via membrane fusion","type":"exact"},{"name":"positive regulation of viral-cell fusion molecule activity","type":"related"},{"name":"up regulation of fusion of virus membrane with host plasma membrane","type":"exact"},{"name":"up regulation of viral entry into host cell via membrane fusion with the plasma membrane","type":"related"},{"name":"up regulation of viral envelope fusion with host cell membrane","type":"exact"},{"name":"up regulation of viral envelope fusion with host membrane","type":"exact"},{"name":"up regulation of viral envelope fusion with host plasma membrane","type":"exact"},{"name":"up regulation of viral penetration via membrane fusion","type":"exact"},{"name":"up regulation of viral-cell fusion molecule activity","type":"related"},{"name":"up-regulation of fusion of virus membrane with host plasma membrane","type":"exact"},{"name":"up-regulation of viral entry into host cell via membrane fusion with the plasma membrane","type":"related"},{"name":"up-regulation of viral envelope fusion with host cell membrane","type":"exact"},{"name":"up-regulation of viral envelope fusion with host membrane","type":"exact"},{"name":"up-regulation of viral envelope fusion with host plasma membrane","type":"exact"},{"name":"up-regulation of viral penetration via membrane fusion","type":"exact"},{"name":"up-regulation of viral-cell fusion molecule activity","type":"related"},{"name":"upregulation of fusion of virus membrane with host plasma membrane","type":"exact"},{"name":"upregulation of viral entry into host cell via membrane fusion with the plasma membrane","type":"related"},{"name":"upregulation of viral envelope fusion with host cell membrane","type":"exact"},{"name":"upregulation of viral envelope fusion with host membrane","type":"exact"},{"name":"upregulation of viral envelope fusion with host plasma membrane","type":"exact"},{"name":"upregulation of viral penetration via membrane fusion","type":"exact"},{"name":"upregulation of viral-cell fusion molecule activity","type":"related"}],"termid":"GO:1903915"}


id: PBO:0084613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged ORF; YER108C has been merged into YER109C because it has been demonstrated that they correspond to a mutated FLO8 gene with an A to G transition at position 431 in strain S288C, changing amino acid 144 from a Trp to a stop","termid":"PBO:0084613"}


id: MONDO:0001458
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A peripheral nerve lesion that involves the ulnar nerve.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"neuritis of upper limb","termid":"MONDO:0003607"},{"relation_name":"is_a","term_name":"ulnar neuropathy","termid":"MONDO:0007006"},{"relation_name":"is_a","term_name":"peripheral nerve lesion","termid":"MONDO:0024334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"ulnar nerve lesion","secondary_identifiers":["ICD9:354.2","MEDGEN:710723","SCTID:367475009","UMLS:C1288279","DOID:12168","ICD10CM:G56.2"],"synonyms":[{"name":"lesion of ulnar nerve","type":"exact"},{"name":"peripheral nerve lesion of ulnar nerve","type":"exact"},{"name":"ulnar nerve peripheral nerve lesion","type":"exact"}],"termid":"MONDO:0001458","xrefs":{"Monarch":{"xref_id":"0001458"}}}


id: PBO:0028447
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_substrate_specificity,_glutathione_synthetase_to_homoglutathione_synthetase_activity","termid":"PBO:0028447"}


id: GO:0007638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Behavior that is dependent upon the sensation of a mechanical stimulus.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"},{"relation_name":"part_of","term_name":"response to mechanical stimulus","termid":"GO:0009612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mechanosensory behavior","synonyms":[{"name":"behavioral response to mechanical stimulus","type":"exact"},{"name":"behavioural response to mechanical stimulus","type":"exact"},{"name":"mechanosensory behaviour","type":"exact"}],"termid":"GO:0007638"}


id: MONDO:0010272
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndromic X-linked intellectual disability type 10 (obsolete MONDO:0010272)","termid":"MONDO:0010272","xrefs":{"Monarch":{"xref_id":"0010272"}}}


id: GO:0098569
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side of the mycolate outer membrane that faces the cell wall peptidoglycan. It is rich in long-chain mycolic acids (hydroxylated branched-chain fatty acids) that are covalently linked to the cell wall peptidoglycan via an arabinogalactan network.","definition_xrefs":["PMID:18316738","GOC:dos","PMID:18567661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"side of membrane","termid":"GO:0098552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"internal side of mycolate outer membrane","termid":"GO:0098569"}


id: GO:0050379
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucuronate = UDP-L-iduronate.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"UDP-glucuronate 5'-epimerase activity","secondary_identifiers":["KEGG_REACTION:R01387"],"synonyms":[{"name":"C-5-uronosyl epimerase activity","type":"related"},{"name":"UDP-glucuronate 5' epimerase activity","type":"exact"},{"name":"UDP-glucuronic acid 5'-epimerase activity","type":"related"},{"name":"UDP-glucuronic acid epimerase activity","type":"related"},{"name":"UDPglucuronate 5'-epimerase activity","type":"related"},{"name":"uridine diphosphoglucuronate 5'-epimerase activity","type":"related"}],"termid":"GO:0050379"}


id: PBO:0005100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fungal protein associated with endocytosis (predicted)","termid":"PBO:0005100"}


id: SOFP:na_change
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"A nucleic acid modification in some variant feature relative to the reference sequence","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"na_change","termid":"SOFP:na_change"}


id: PBO:0078121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 8-3","termid":"PBO:0078121"}


id: SO:0001010
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cytosine rich domain whereby strands associate both inter- and intramolecularly at moderately acidic pH.","definition_xrefs":["PMID:9753739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_sequence_secondary_structure","termid":"SO:0000142"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"i_motif","synonyms":[{"name":"i motif","type":"exact"},{"name":"short intercalated motif","type":"exact"}],"termid":"SO:0001010"}


id: GO:0061300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the vasculature of the cerebellum over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasculature development","termid":"GO:0001944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellum vasculature development","termid":"GO:0061300"}


id: GO:0150174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phosphatidylcholine metabolic process.","definition_xrefs":["GOC:bc","GOC:aruk","PMID:30074985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatidylcholine metabolic process","termid":"GO:0150172"},{"relation_name":"is_a","term_name":"negative regulation of phospholipid metabolic process","termid":"GO:1903726"},{"relation_name":"negatively_regulates","term_name":"phosphatidylcholine metabolic process","termid":"GO:0046470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of phosphatidylcholine metabolic process","termid":"GO:0150174"}


id: PBO:0086894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transporter; member of a family of seven S. cerevisiae genes (AVT1-7) related to vesicular GABA-glycine transporters; AVT5 has a paralog, AVT6, that arose from the whole genome duplication","termid":"PBO:0086894"}


id: PBO:0058945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIX23 pseudogene 4","termid":"PBO:0058945"}


id: PBO:0012832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Septum Promoting GTPase","termid":"PBO:0012832"}


id: PR:000050464
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell division control protein 12 (Schizosaccharomyces pombe) that has not been phosphorylated on residues equivalent to Thr-20, Thr-22, Ser-64, Thr-95, Thr-151 and Ser-463 of the amino acid sequence represented by UniProtKB:Q10059. Example: UniProtKB:Q10059, Thr-20/Thr-22/Ser-64/Thr-95/Thr-151/Ser-463, PR:000026291.","definition_xrefs":["PomBase:VW","PRO:DAN","PMID:29343550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division control protein 12 (Schizosaccharomyces pombe)","termid":"PR:000044734"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cdc12/UnPhos(T20,T21,S64,T95,T151,S463)","pombase_gene_id":"SPAC1F5.04c","synonyms":[{"name":"PomBase_original_PRO_term_name: cell division control protein 12 unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-cdc12/UnPhos:1","type":"exact"},{"name":"UniProtKB:Q10059, Thr-20/Thr-22/Ser-64/Thr-95/Thr-151/Ser-463, PR:000026291","type":"narrow"},{"name":"cdc12/UnPhos(T20,T21,S64,T95,T151,S463)","type":"exact"}],"termid":"PR:000050464"}


id: GO:0060440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process pertaining to the initial formation of a trachea from unspecified parts. The process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the trachea is recognizable. The trachea is the portion of the airway that attaches to the bronchi as it branches.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ formation","termid":"GO:0048645"},{"relation_name":"part_of","term_name":"trachea morphogenesis","termid":"GO:0060439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trachea formation","termid":"GO:0060440"}


id: GO:0032812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of epinephrine.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epinephrine secretion","termid":"GO:0014060"},{"relation_name":"is_a","term_name":"positive regulation of catecholamine secretion","termid":"GO:0033605"},{"relation_name":"positively_regulates","term_name":"epinephrine secretion","termid":"GO:0048242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of epinephrine secretion","synonyms":[{"name":"activation of epinephrine secretion","type":"narrow"},{"name":"positive regulation of adrenaline secretion","type":"exact"},{"name":"stimulation of epinephrine secretion","type":"narrow"},{"name":"up regulation of epinephrine secretion","type":"exact"},{"name":"up-regulation of epinephrine secretion","type":"exact"},{"name":"upregulation of epinephrine secretion","type":"exact"}],"termid":"GO:0032812"}


id: GO:0018462
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-(hydroxymethyl)benzenesulfonate + NAD+ = 4-formylbenzenesulfonate + H+ + NADH.","definition_xrefs":["RHEA:24412","EC:1.1.1.257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"4-(hydroxymethyl)benzenesulfonate dehydrogenase activity","secondary_identifiers":["MetaCyc:SOLDEHYD-RXN","UM-BBD_reactionID:r0291","KEGG_REACTION:R05271"],"synonyms":[{"name":"4-(hydroxymethyl)benzenesulfonate:NAD+ oxidoreductase activity","type":"related"},{"name":"4-(hydroxymethyl)benzenesulphonate dehydrogenase activity","type":"exact"},{"name":"4-sulfobenzyl alcohol dehydrogenase activity","type":"exact"}],"termid":"GO:0018462"}


id: PBO:0064387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 9","termid":"PBO:0064387"}


id: PR:Q9UT17
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9.11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C9.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9.11","synonyms":[{"name":"Spom972h-SPAC9.11","type":"exact"}],"termid":"PR:Q9UT17"}


id: GO:1900320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of methane biosynthetic process from dimethylamine.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amine metabolic process","termid":"GO:0033240"},{"relation_name":"is_a","term_name":"regulation of methane biosynthetic process from dimethylamine","termid":"GO:1900318"},{"relation_name":"is_a","term_name":"positive regulation of alkane biosynthetic process","termid":"GO:1901579"},{"relation_name":"is_a","term_name":"positive regulation of cellular respiration","termid":"GO:1901857"},{"relation_name":"positively_regulates","term_name":"methane biosynthetic process from dimethylamine","termid":"GO:2001129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"positive regulation of methane biosynthetic process from dimethylamine","synonyms":[{"name":"activation of methane biosynthetic process from dimethylamine","type":"narrow"},{"name":"up regulation of methane biosynthetic process from dimethylamine","type":"exact"},{"name":"up-regulation of methane biosynthetic process from dimethylamine","type":"exact"},{"name":"upregulation of methane biosynthetic process from dimethylamine","type":"exact"}],"termid":"GO:1900320"}


id: MONDO:1011505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fibrocartilaginous embolic myelopathy that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibrocartilaginous embolic myelopathy, non-human animal","termid":"MONDO:1011445"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrocartilaginous embolic myelopathy, horse","secondary_identifiers":["OMIA:001120-9796"],"termid":"MONDO:1011505","xrefs":{"Monarch":{"xref_id":"1011505"}}}


id: PBO:0040575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B4GAT1 divergent transcript","termid":"PBO:0040575"}


id: PBO:0086246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that may form an active mitochondrial KHE system; mitochondrial inner-membrane protein; non-essential gene; KHE system stands for K+/H+ exchanger system","termid":"PBO:0086246"}


id: MONDO:0017596
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A diffuse large B-cell lymphoma arising from the central nervous system.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse large B-cell lymphoma","termid":"MONDO:0018905"},{"relation_name":"is_a","term_name":"central nervous system non-hodgkin lymphoma","termid":"MONDO:0044887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"diffuse large B-cell lymphoma of the central nervous system","secondary_identifiers":["SCTID:734066005","ICDO:9680/3","NCIT:C71720","Orphanet:300849","GARD:21246","UMLS:C2026186","MEDGEN:378339","icd11.foundation:1029172881","DOID:0081313"],"synonyms":[{"name":"CNS DLBCL","type":"exact"},{"name":"DLBCL of the CNS","type":"exact"},{"name":"central nervous system diffuse large B-cell lymphoma","type":"exact"},{"name":"diffuse large B-cell lymphoma of central nervous system","type":"exact"},{"name":"primary DLBCL of the CNS","type":"exact"},{"name":"primary diffuse large B-cell lymphoma of the central nervous system","type":"exact"}],"termid":"MONDO:0017596","xrefs":{"Monarch":{"xref_id":"0017596"}}}


id: PBO:0042051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 110","termid":"PBO:0042051"}


id: PBO:0045061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLG2 antisense RNA 1","termid":"PBO:0045061"}


id: PATO:0001882
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape quality inhering in a bearer by virtue of the bearer's resembling a slug.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"limaciform","termid":"PATO:0001882"}


id: GO:0008336
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + 4-(trimethylammonio)butanoate + O2 = carnitine + CO2 + succinate.","definition_xrefs":["EC:1.14.11.1","RHEA:24028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"gamma-butyrobetaine dioxygenase activity","secondary_identifiers":["MetaCyc:1.14.11.1-RXN","KEGG_REACTION:R02397","Reactome:R-HSA-71261"],"synonyms":[{"name":"4-trimethylammoniobutanoate,2-oxoglutarate:oxygen oxidoreductase (3-hydroxylating)","type":"related"},{"name":"alpha-butyrobetaine hydroxylase activity","type":"related"},{"name":"butyrobetaine hydroxylase activity","type":"related"},{"name":"g-butyrobetaine dioxygenase activity","type":"exact"},{"name":"gamma-BBH activity","type":"related"},{"name":"gamma-butyrobetaine hydroxylase activity","type":"related"},{"name":"gamma-butyrobetaine,2-oxoglutarate dioxygenase activity","type":"exact"}],"termid":"GO:0008336"}


id: FYPO:0001908
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any unspliced or incompletely spliced mRNA precursor measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"increased pre-mRNA level","synonyms":[{"name":"accumulation of pre-mRNA transcripts","type":"related"},{"name":"increased pre-mRNA accumulation","type":"related"},{"name":"increased pre-mRNA level during mitotic cell cycle","type":"related"},{"name":"increased pre-mRNA level during vegetative growth","type":"exact"},{"name":"increased pre-mRNA transcript level","type":"exact"}],"termid":"FYPO:0001908"}


id: GO:0039652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a virus initiates, promotes, or enhances an NF-kappaB signaling cascade in its host organism.","definition_xrefs":["PMID:7845680","PMID:11907233"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by virus of host NF-kappaB cascade (obsolete GO:0039652)","synonyms":[{"name":"activation by virus of host NF-kappaB transcription factor activity","type":"related"}],"termid":"GO:0039652"}


id: MONDO:0968959
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated arhinencephaly is a rare non-syndromic central nervous system malformation defined by the agenesis of the olfactory bulbs and tracts and characterized by complete congenital anosmia.","definition_xrefs":["Orphanet:268936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"isolated arhinencephaly","secondary_identifiers":["UMLS:C4749732","GARD:20979","MEDGEN:1650277"],"termid":"MONDO:0968959","xrefs":{"Monarch":{"xref_id":"0968959"}}}


id: PBO:0082244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of fatty acid synthetase; complex catalyzes the synthesis of long-chain saturated fatty acids; contains the acyl-carrier protein domain and beta-ketoacyl reductase, beta-ketoacyl synthase and self-pantetheinylation activities","termid":"PBO:0082244"}


id: GO:0048627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the myoblast over time, from its formation to the mature structure. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["GOC:mtg_muscle","CL:0000056","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"myoblast differentiation","termid":"GO:0045445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast development","termid":"GO:0048627"}


id: SO:0001351
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_methyl_2_thiouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methyl_2_thiouridine","secondary_identifiers":["RNAMOD:059"],"synonyms":[{"name":"5-methyl-2-thiouridine","type":"exact"},{"name":"five methyl 2 thiouridine","type":"exact"},{"name":"m5s2U","type":"exact"}],"termid":"SO:0001351"}


id: PBO:0061132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMD3 ribosome export adaptor pseudogene 2","termid":"PBO:0061132"}


id: GO:0060536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of cartilage are generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"cartilage development","termid":"GO:0051216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cartilage morphogenesis","termid":"GO:0060536"}


id: GO:1902640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of propan-2-ol.","definition_xrefs":["GO_REF:0000068","GOC:TermGenie","PMID:16346237","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"propan-2-ol metabolic process","termid":"GO:1902639"},{"relation_name":"is_a","term_name":"secondary alcohol biosynthetic process","termid":"GO:1902653"},{"relation_name":"is_a","term_name":"fatty alcohol biosynthetic process","termid":"GO:1903175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"propan-2-ol biosynthetic process","synonyms":[{"name":"Isopropanol biosynthetic process","type":"exact"},{"name":"Isopropyl alcohol biosynthetic process","type":"exact"},{"name":"propan-2-ol anabolism","type":"exact"},{"name":"propan-2-ol biosynthesis","type":"exact"},{"name":"propan-2-ol formation","type":"exact"},{"name":"propan-2-ol synthesis","type":"exact"}],"termid":"GO:1902640"}


id: MONDO:0015640
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Benign infantile seizures associated with mild gastroenteritis is a rare infantile epilepsy syndrome characterized by benign afebrile seizures in previously healthy infants and children (age range 1 month to 6 years) with mild acute gastroenteritis without any central nervous system infection, severe dehydration, or electrolyte imbalances. In most cases the seizures are tonic-clonic with focal origin on EEG, occur between day 1 and 6 following onset of acute gastroenteritis, cease within 24 hours and do not persist after the illness.","definition_xrefs":["Orphanet:166305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign partial infantile seizures","termid":"MONDO:0015642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"benign infantile seizures associated with mild gastroenteritis","secondary_identifiers":["UMLS:C4707564","SCTID:765756007","MEDGEN:1647397","GARD:20074","icd11.foundation:839512399"],"termid":"MONDO:0015640","xrefs":{"Monarch":{"xref_id":"0015640"}}}


id: GO:2001242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"is_a","term_name":"regulation of apoptotic signaling pathway","termid":"GO:2001233"},{"relation_name":"regulates","term_name":"intrinsic apoptotic signaling pathway","termid":"GO:0097193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of intrinsic apoptotic signaling pathway","synonyms":[{"name":"regulation of intrinsic apoptosis","type":"narrow"},{"name":"regulation of intrinsic apoptotic pathway","type":"exact"},{"name":"regulation of intrinsic apoptotic signalling pathway","type":"exact"},{"name":"regulation of mitochondrial-mediated apoptotic pathway","type":"exact"}],"termid":"GO:2001242"}


id: PBO:0027137
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_serine_phosphorylation_during_glucose_starvation","termid":"PBO:0027137"}


id: FYPO:0004823
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the number of ribosomal DNA (rDNA) repeats present in the rDNA arrays on chromosome III is abnormal (significantly greater or less than the range in wild type cells).","definition_xrefs":["PomBase:mah","PMID:25417108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal rDNA copy number","synonyms":[{"name":"abnormal ribosomal DNA copy number","type":"exact"}],"termid":"FYPO:0004823"}


id: PBO:0082000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger SWIM-type containing 1","termid":"PBO:0082000"}


id: MONDO:0012150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"attention deficit-hyperactivity disorder","termid":"MONDO:0007743"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attention deficit-hyperactivity disorder, susceptibility to, 2","secondary_identifiers":["MEDGEN:323086","OMIM:608904","UMLS:C1837152"],"synonyms":[{"name":"ADHD2","type":"exact"},{"name":"attention Deficit-hyperactivity disorder, susceptibility to, type 2","type":"exact"},{"name":"attention deficit-hyperactivity disorder, susceptibility to, 2","type":"exact"}],"termid":"MONDO:0012150","xrefs":{"Monarch":{"xref_id":"0012150"}}}


id: PBO:0066636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIMS binding protein 3B","termid":"PBO:0066636"}


id: GO:0019748
data:
  {"annotated_genes":["SJAG_01869","SJAG_00469","SJAG_04032","SJAG_00792","SJAG_04031"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95922,59631,107223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031169"},{"annotations":[93630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043387"},{"annotations":[95868],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905569"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in many of the chemical changes of compounds that are not necessarily required for growth and maintenance of cells, and are often unique to a taxon. In multicellular organisms secondary metabolism is generally carried out in specific cell types, and may be useful for the organism as a whole. In unicellular organisms, secondary metabolism is often used for the production of antibiotics or for the utilization and acquisition of unusual nutrients.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00469":null,"SJAG_00792":null,"SJAG_01869":null,"SJAG_04031":null,"SJAG_04032":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"secondary metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Wikipedia:Secondary_metabolism"],"synonyms":[{"name":"secondary metabolism","type":"exact"},{"name":"secondary metabolite metabolic process","type":"exact"},{"name":"secondary metabolite metabolism","type":"exact"}],"termid":"GO:0019748","terms_by_termid":{"GO:0031169":null,"GO:0043387":null,"GO:1905569":null}}


id: PBO:0077144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidine kinase 1","termid":"PBO:0077144"}


id: GO:1900596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (+)-kotanin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"(+)-kotanin metabolic process","termid":"GO:1900594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"(+)-kotanin biosynthetic process","synonyms":[{"name":"(+)-kotanin anabolism","type":"exact"},{"name":"(+)-kotanin biosynthesis","type":"exact"},{"name":"(+)-kotanin formation","type":"exact"},{"name":"(+)-kotanin synthesis","type":"exact"}],"termid":"GO:1900596"}


id: GO:1901431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to cycloalkane.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to cycloalkane","termid":"GO:0014071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to cycloalkane","termid":"GO:1901431"}


id: GO:0009717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of isoflavonoids, a group of water-soluble phenolic derivatives, isomeric with flavonoids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid biosynthetic process","termid":"GO:0009699"},{"relation_name":"is_a","term_name":"isoflavonoid metabolic process","termid":"GO:0046287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"isoflavonoid biosynthetic process","synonyms":[{"name":"isoflavonoid anabolism","type":"exact"},{"name":"isoflavonoid biosynthesis","type":"exact"},{"name":"isoflavonoid formation","type":"exact"},{"name":"isoflavonoid synthesis","type":"exact"}],"termid":"GO:0009717"}


id: GO:0009146
data:
  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of purine nucleoside triphosphate, a compound consisting of a purine base linked to a ribose or deoxyribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate catabolic process","termid":"GO:0009143"},{"relation_name":"is_a","term_name":"purine nucleoside triphosphate metabolic process","termid":"GO:0009144"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"purine nucleoside triphosphate catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"purine nucleoside triphosphate breakdown","type":"exact"},{"name":"purine nucleoside triphosphate catabolism","type":"exact"},{"name":"purine nucleoside triphosphate degradation","type":"exact"}],"termid":"GO:0009146","terms_by_termid":{"GO:0035863":null}}


id: PBO:0054910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2324","termid":"PBO:0054910"}


id: MONDO:0001326
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Death of pulp tissue with or without bacterial invasion. When the necrosis is due to ischemia with superimposed bacterial infection, it is referred to as pulp gangrene. When the necrosis is non-bacterial in origin, it is called pulp mummification.","definition_xrefs":["MESH:D003790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dental pulp disorder","termid":"MONDO:0003394"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dental pulp necrosis","secondary_identifiers":["ICD9:522.1","ICD10CM:K04.1","MEDGEN:8306","SCTID:42711005","UMLS:C0011407","DOID:11623"],"synonyms":[{"name":"necrosis of pulp","type":"exact"},{"name":"necrosis of the pulp","type":"exact"},{"name":"necrotic pulp","type":"exact"},{"name":"pulp necrosis","type":"exact"}],"termid":"MONDO:0001326","xrefs":{"Monarch":{"xref_id":"0001326"}}}


id: PBO:0090496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridine synthase Pus4","termid":"PBO:0090496"}


id: GO:0006280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which genetic material undergoes a detectable and heritable structural change. There are three categories of mutation: genome mutations, involving addition or subtraction of one or more whole chromosomes; chromosome mutations, which alter the structure of chromosomes; and gene mutations, where the structure of a gene is altered at the molecular level.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete mutagenesis (obsolete GO:0006280)","synonyms":[{"name":"mutagenesis","type":"exact"}],"termid":"GO:0006280"}


id: PBO:0088079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin (Ub) chain assembly factor (E4); forms branched Ub chains on substrates destined for degradation, catalyzing K48-linked multi-monoubiquitination of K29-linked Ub chains assembled by the Ub-ligase Ufd4p; involved in the Ub-fusion degradation pathway, OLE membrane fluidity pathway, stress response survival and the ERAD pathway for misfolded proteins, where it promotes ubiquitination and transfer of ERAD substrates to Rad23p; U-box family member; homologous to human Ufd2a and Ufd2b","termid":"PBO:0088079"}


id: PBO:0003261
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of Wis1-Sty1 MAPKK-MAPK signaling pathway","termid":"PBO:0003261"}


id: PBO:0084822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein, putative acetyltransferase; similar to bacterial galactoside O-acetyltransferases; induced by oleate in OAF1/PIP2-dependent manner; promoter contains oleate response element consensus sequence; non-essential gene","termid":"PBO:0084822"}


id: PATO:0002162
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave quality inhering in a bearer by virtue of the bearer's forming or resembling an arch of an increased apical height.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"arched","termid":"PATO:0001594"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high-arched","termid":"PATO:0002162"}


id: MOD:01699
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively adds a hydrogen cation, a proton, forming a cationic residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protonated residue","synonyms":[{"name":"H+NRes","type":"exact"}],"termid":"MOD:01699"}


id: PBO:0041986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 28B","termid":"PBO:0041986"}


id: PR:Q09877
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sif3 gene.","definition_xrefs":["UniProtKB:Q09877","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sad1-interacting factor 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.15","synonyms":[{"name":"Spom972h-sif3","type":"exact"}],"termid":"PR:Q09877"}


id: PBO:0071127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 129","termid":"PBO:0071127"}


id: PATO:0002220
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a protein or a molecule by virtue of the bearer's having a phosphate (PO4) group.","definition_xrefs":["wikipedia:en.wikipedia.org/wiki/Phosphorylated"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylation","termid":"PATO:0002262"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylated","termid":"PATO:0002220"}


id: PBO:0041706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin 2 pseudogene 1","termid":"PBO:0041706"}


id: GO:1900047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hemostasis.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of hemostasis","termid":"GO:1900046"},{"relation_name":"negatively_regulates","term_name":"hemostasis","termid":"GO:0007599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hemostasis","synonyms":[{"name":"down regulation of hemostasis","type":"exact"},{"name":"down-regulation of hemostasis","type":"exact"},{"name":"downregulation of hemostasis","type":"exact"},{"name":"inhibition of hemostasis","type":"narrow"}],"termid":"GO:1900047"}


id: GO:1905372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ceramide phosphoethanolamine.","definition_xrefs":["GOC:hjd","PMID:25667419","GOC:TermGenie","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid catabolic process","termid":"GO:0009395"},{"relation_name":"is_a","term_name":"sphingolipid catabolic process","termid":"GO:0030149"},{"relation_name":"is_a","term_name":"ceramide phosphoethanolamine metabolic process","termid":"GO:1905371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"ceramide phosphoethanolamine catabolic process","synonyms":[{"name":"ceramide phosphoethanolamine breakdown","type":"exact"},{"name":"ceramide phosphoethanolamine catabolism","type":"exact"},{"name":"ceramide phosphoethanolamine degradation","type":"exact"}],"termid":"GO:1905372"}


id: PBO:0066746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 44","termid":"PBO:0066746"}


id: GO:0050824
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to water (H2O).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete water binding (obsolete GO:0050824)","termid":"GO:0050824"}


id: PBO:0065811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB3 GTPase activating protein catalytic subunit 1","termid":"PBO:0065811"}


id: PBO:0048975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate acyltransferase 4","termid":"PBO:0048975"}


id: PBO:0030095
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_rapamycin","termid":"PBO:0030095"}


id: PBO:0069407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 667, pseudogene","termid":"PBO:0069407"}


id: GO:1904529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of actin filament binding.","definition_xrefs":["PMID:24520051","GO_REF:0000059","GOC:als","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of actin filament binding (obsolete GO:1904529)","synonyms":[{"name":"regulation of F-actin binding","type":"exact"},{"name":"regulation of actin cross-linking activity","type":"related"}],"termid":"GO:1904529"}


id: RO:HOM0000066
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Biological homology that involves parts of the same organism.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_biological_homology_relationship_with","termid":"RO:HOM0000008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_iterative_homology_relationship_with","synonyms":[{"name":"iterative homologous to","type":"exact"}],"termid":"RO:HOM0000066"}


id: PBO:0002478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase Gpd2","termid":"PBO:0002478"}


id: PBO:0116616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3142","termid":"PBO:0116616"}


id: GO:0080148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a response to water deprivation. Response to water deprivation is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water deprivation stimulus, prolonged deprivation of water.","definition_xrefs":["PMID:18835996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of response to water deprivation","termid":"GO:2000070"},{"relation_name":"negatively_regulates","term_name":"response to water deprivation","termid":"GO:0009414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to water deprivation","termid":"GO:0080148"}


id: GO:1903554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway that is involved in the defense response to Gram-negative bacterium.","definition_xrefs":["GO_REF:0000060","GOC:kmv","PMID:25303524","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"},{"relation_name":"part_of","term_name":"defense response to Gram-negative bacterium","termid":"GO:0050829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"G protein-coupled receptor signaling pathway involved in defense response to Gram-negative bacterium","synonyms":[{"name":"G protein coupled receptor protein signaling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"G protein coupled receptor protein signaling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"G protein coupled receptor protein signaling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"G protein coupled receptor protein signaling pathway involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"G protein coupled receptor protein signaling pathway involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"G protein coupled receptor protein signalling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"G protein coupled receptor protein signalling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"G protein coupled receptor protein signalling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"G protein coupled receptor protein signalling pathway involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"G protein coupled receptor protein signalling pathway involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"G-protein coupled receptor protein signal transduction involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"G-protein coupled receptor protein signal transduction involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"G-protein coupled receptor protein signal transduction involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"G-protein coupled receptor protein signal transduction involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"G-protein coupled receptor protein signal transduction involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"G-protein coupled receptor protein signaling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"G-protein coupled receptor protein signaling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"G-protein coupled receptor protein signaling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"G-protein coupled receptor protein signaling pathway involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"G-protein coupled receptor protein signaling pathway involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"G-protein coupled receptor signaling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"G-protein coupled receptor signaling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"G-protein coupled receptor signaling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"G-protein coupled receptor signaling pathway involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"G-protein coupled receptor signalling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"G-protein coupled receptor signalling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"G-protein coupled receptor signalling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"G-protein coupled receptor signalling pathway involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"G-protein coupled receptor signalling pathway involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"G-protein-coupled receptor protein signaling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"G-protein-coupled receptor protein signaling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"G-protein-coupled receptor protein signaling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"G-protein-coupled receptor protein signaling pathway involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"G-protein-coupled receptor protein signalling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"G-protein-coupled receptor protein signalling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"G-protein-coupled receptor protein signalling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"G-protein-coupled receptor protein signalling pathway involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"G-protein-coupled receptor protein signalling pathway involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"GPCR signaling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"GPCR signaling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"GPCR signaling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"GPCR signaling pathway involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"GPCR signaling pathway involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"GPCR signalling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"GPCR signalling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"GPCR signalling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"GPCR signalling pathway involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"GPCR signalling pathway involved in defense response to Gram-negative bacterium","type":"exact"}],"termid":"GO:1903554"}


id: PBO:0065083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psoriasis associated non-protein coding RNA induced by stress","termid":"PBO:0065083"}


id: PBO:0029656
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_premeiotic_DNA_replication","termid":"PBO:0029656"}


id: GO:2001227
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to quercitrin.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"flavonoid binding","termid":"GO:0097243"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"quercitrin binding","termid":"GO:2001227"}


id: GO:0050957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive an orientational stimulus, convert it to a molecular signal, and recognize and characterize the signal. Equilibrioception refers to a combination of processes by which an organism can perceive its orientation with respect to gravity. In animals, stimuli come from labyrinth system of the inner ears, monitoring the direction of motion; visual stimuli, with information on orientation and motion; pressure receptors, which tell the organism which body surfaces are in contact with the ground; and proprioceptive cues, which report which parts of the body are in motion.","definition_xrefs":["PMID:29303967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception","termid":"GO:0007600"},{"relation_name":"part_of","term_name":"neuromuscular process controlling balance","termid":"GO:0050885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"equilibrioception","secondary_identifiers":["Wikipedia:Equilibrioception"],"synonyms":[{"name":"sensory perception of orientation with respect to gravity","type":"exact"}],"termid":"GO:0050957"}


id: PATO:0000939
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000939 regular shape (obsolete PATO:0000939)","termid":"PATO:0000939"}


id: PBO:0066306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination signal binding protein for immunoglobulin kappa J region like","termid":"PBO:0066306"}


id: PBO:0034332
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-2D_boundary_of","termid":"PBO:0034332"}


id: PR:O13639
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An adenosylhomocysteinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02844","PANTHER:PTHR23420:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylhomocysteinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.18c","secondary_identifiers":["UniProtKB:O13639"],"synonyms":[{"name":"AdoHcyase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"S-adenosyl-L-homocysteine hydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-AHCY","type":"exact"}],"termid":"PR:O13639"}


id: GO:0015049
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methane + NAD(P)H + H+ + O2 = methanol + NAD(P)+ + H2O.","definition_xrefs":["EC:1.14.13.25","PMID:10896210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"methane monooxygenase [NAD(P)H] activity","secondary_identifiers":["UM-BBD_enzymeID:r0237","MetaCyc:METHANE-MONOOXYGENASE-RXN"],"synonyms":[{"name":"methane hydroxylase activity","type":"related"},{"name":"methane,NAD(P)H:oxygen oxidoreductase (hydroxylating)","type":"related"}],"termid":"GO:0015049"}


id: PBO:0048157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frizzled class receptor 3","termid":"PBO:0048157"}


id: MONDO:0700144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or chronic malignant (clonal) hematologic disorder, arising from hematopoietic stem cells in dogs. It is characterized by the presence of primitive or atypical myeloid or lymphoid cells in the bone marrow and the blood.","definition_xrefs":["NCIT:C128120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukemia, non-human animal","termid":"MONDO:0700100"},{"relation_name":"is_a","term_name":"canine neoplasm","termid":"MONDO:0700139"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine leukemia","termid":"MONDO:0700144","xrefs":{"Monarch":{"xref_id":"0700144"}}}


id: PBO:0083750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential conserved protein with a role in cell wall integrity; contains six TPR (tetratricopeptide repeat) domains clustered in the C-terminal region; conditional mutant is suppressed by overexpression of GFA1; protein abundance increases in response to DNA replication stress","termid":"PBO:0083750"}


id: PBO:0116524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gocam_contributor","termid":"PBO:0116524"}


id: MONDO:1011167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteochondritis dissecans that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondritis dissecans, non-human animal","termid":"MONDO:1010298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteochondritis dissecans, dog","secondary_identifiers":["OMIA:000748-9615"],"termid":"MONDO:1011167","xrefs":{"Monarch":{"xref_id":"1011167"}}}


id: FYPO:0007223
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the establishment of chromatin silencing at centromere outer repeat regions is decreased.","definition_xrefs":["PMID:31822915","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at centromere outer repeat","termid":"FYPO:0002346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased establishment of chromatin silencing at centromere outer repeat region","synonyms":[{"name":"decreased establishment of chromatin silencing at centromere outer repeat at centromere otr during vegetative growth","type":"exact"},{"name":"decreased establishment of chromatin silencing at centromere outer repeat at centromeric outer repeat during vegetative growth","type":"exact"},{"name":"decreased establishment of chromatin silencing at centromere outer repeat at pericentric region during vegetative growth","type":"related"},{"name":"decreased establishment of chromatin silencing at centromere outer repeat at pericentromeric region during vegetative growth","type":"related"},{"name":"decreased establishment of chromatin silencing at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"reduced establishment of chromatin silencing at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0007223"}


id: GO:0035938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of estradiol into the circulatory system.","definition_xrefs":["GOC:sl","PMID:21632818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"steroid hormone secretion","termid":"GO:0035929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"estradiol secretion","synonyms":[{"name":"oestradiol secretion","type":"exact"}],"termid":"GO:0035938"}


id: PBO:0066953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 255","termid":"PBO:0066953"}


id: MONDO:0004128
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A large cell lung carcinoma detectable by sputum cytology only. The primary tumor is undetectable radiographically or during bronchoscopy; therefore, it can not be assessed.","definition_xrefs":["NCIT:C6685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung large cell carcinoma","termid":"MONDO:0003050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung occult large cell carcinoma","secondary_identifiers":["MEDGEN:235399","UMLS:C1335095","DOID:7169"],"synonyms":[{"name":"occult large cell carcinoma of lung","type":"related"},{"name":"occult large cell carcinoma of the lung","type":"exact"},{"name":"occult large cell lung carcinoma","type":"related"}],"termid":"MONDO:0004128","xrefs":{"Monarch":{"xref_id":"0004128"}}}


id: PBO:0082815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved fungal gene linked to DNA repair and proteasome function; putative substrate of cAMP-dependent protein kinase (PKA); green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; YPL260W is not an essential gene; protein abundance increases in response to DNA replication stress","termid":"PBO:0082815"}


id: PBO:0071416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 22","termid":"PBO:0071416"}


id: MONDO:0030069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hyper-IgE syndrome","termid":"MONDO:0018037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"hyper-IgE recurrent infection syndrome 5, autosomal recessive","secondary_identifiers":["OMIM:618944","MEDGEN:1716052","UMLS:C5394550"],"synonyms":[{"name":"HIES5","type":"exact"},{"name":"HYPER-IgE RECURRENT INFECTION SYNDROME 5, AUTOSOMAL RECESSIVE","type":"exact"},{"name":"hyper-IgE recurrent infection syndrome 5, autosomal recessive","type":"exact"}],"termid":"MONDO:0030069","xrefs":{"Monarch":{"xref_id":"0030069"}}}


id: MONDO:0012498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital stationary night blindness in which the cause of the disease is a mutation in the RHO gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital stationary night blindness","termid":"MONDO:0016293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005328"],"is_obsolete":false,"name":"congenital stationary night blindness autosomal dominant 1","secondary_identifiers":["MESH:C566474","UMLS:C1864869","GARD:15488","DOID:0110862","MEDGEN:355852","OMIM:610445"],"synonyms":[{"name":"CSNBAD1","type":"exact"},{"name":"RHO congenital stationary night blindness","type":"exact"},{"name":"congenital stationary night blindness autosomal dominant type 1","type":"exact"},{"name":"congenital stationary night blindness caused by mutation in RHO","type":"exact"},{"name":"night blindness, congenital stationary, autosomal dominant 1","type":"related"},{"name":"night blindness, congenital stationary, autosomal dominant type 1","type":"exact"},{"name":"night blindness, congenital stationary, rhodopsin-related","type":"related"},{"name":"rhodopsin-related congenital stationary night blindness","type":"exact"}],"termid":"MONDO:0012498","xrefs":{"Monarch":{"xref_id":"0012498"}}}


id: GO:0043488
data:
  {"annotated_genes":["SJAG_03283","SJAG_04818","SJAG_00759","SJAG_04407","SJAG_03157","SJAG_00966","SJAG_04006","SJAG_03179","SJAG_02573","SJAG_00285","SJAG_05010","SJAG_03883","SJAG_02370","SJAG_03876","SJAG_04946","SJAG_04084","SJAG_01818","SJAG_00854","SJAG_05694","SJAG_02213","SJAG_02036","SJAG_01191","SJAG_01910","SJAG_02383","SJAG_03597","SJAG_00686","SJAG_04118","SJAG_03113","SJAG_03745","SJAG_00343","SJAG_04825","SJAG_02808","SJAG_01521","SJAG_00670","SJAG_03696","SJAG_04321","SJAG_04153","SJAG_04824","SJAG_05322","SJAG_04880","SJAG_03886","SJAG_02239","SJAG_16457","SJAG_02540","SJAG_00391","SJAG_02622","SJAG_01625","SJAG_01053","SJAG_01696","SJAG_01944","SJAG_04350","SJAG_05014","SJAG_00797"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90222],"is_not":false,"summary":null,"term":"GO:0043488"},{"annotations":[120192],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061158"},{"annotations":[101915,80461,80501,92004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070935"},{"annotations":[79312,113856,58876,81364,76150,77542],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000290"},{"annotations":[119979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061157"},{"annotations":[72370,91302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048255"},{"annotations":[93488],"is_not":false,"rel_names":["regulates","is_a","negatively_regulates"],"summary":null,"term":"GO:0060212"},{"annotations":[106222,94889,120180,97731,117745,117306,107090,109293,103900,108299,94059,99054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071042"},{"annotations":[72338,60449,78358,101749,99866,99953,117005,81389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000288"},{"annotations":[96144,75423,94314,97324,79454,117521,118465,71983,77224,80543,91603,81491,92595,94411],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000289"},{"annotations":[93489],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036450"},{"annotations":[67872,92596,119094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990074"},{"annotations":[91617,92007,93339],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000815"}]},"cv_name":"biological_process","definition":"Any process that modulates the propensity of mRNA molecules to degradation. Includes processes that both stabilize and destabilize mRNAs.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of RNA stability","termid":"GO:0043487"},{"relation_name":"is_a","term_name":"regulation of mRNA catabolic process","termid":"GO:0061013"}],"gene_count":53,"genes_by_uniquename":{"SJAG_00285":null,"SJAG_00343":null,"SJAG_00391":null,"SJAG_00670":null,"SJAG_00686":null,"SJAG_00759":null,"SJAG_00797":null,"SJAG_00854":null,"SJAG_00966":null,"SJAG_01053":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01625":null,"SJAG_01696":null,"SJAG_01818":null,"SJAG_01910":null,"SJAG_01944":null,"SJAG_02036":null,"SJAG_02213":null,"SJAG_02239":null,"SJAG_02370":null,"SJAG_02383":null,"SJAG_02540":null,"SJAG_02573":null,"SJAG_02622":null,"SJAG_02808":null,"SJAG_03113":null,"SJAG_03157":null,"SJAG_03179":null,"SJAG_03283":null,"SJAG_03597":null,"SJAG_03696":null,"SJAG_03745":null,"SJAG_03876":null,"SJAG_03883":null,"SJAG_03886":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04118":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04350":null,"SJAG_04407":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_04825":null,"SJAG_04880":null,"SJAG_04946":null,"SJAG_05010":null,"SJAG_05014":null,"SJAG_05322":null,"SJAG_05694":null,"SJAG_16457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of mRNA stability","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-428359","Reactome:R-HSA-450531"],"termid":"GO:0043488","terms_by_termid":{"GO:0000288":null,"GO:0000289":null,"GO:0000290":null,"GO:0036450":null,"GO:0043488":null,"GO:0048255":null,"GO:0060212":null,"GO:0061157":null,"GO:0061158":null,"GO:0070935":null,"GO:0071042":null,"GO:1990074":null,"GO:2000815":null}}


id: MONDO:1012494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal T cell-negative, B cell-negative, NK cell-positive severe combined immunodeficiency disease with sensitivity to ionizing radiation, non-human animal","termid":"MONDO:1011732"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal T cell-negative, B cell-negative, NK cell-positive severe combined immunodeficiency disease with sensitivity to ionizing radiation, pig","secondary_identifiers":["OMIA:001986-9823"],"termid":"MONDO:1012494","xrefs":{"Monarch":{"xref_id":"1012494"}}}


id: GO:1901125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving candicidin.","definition_xrefs":["GOC:yaf","UniPathway:UPA00101","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"candicidin metabolic process","synonyms":[{"name":"candicidin metabolism","type":"exact"}],"termid":"GO:1901125"}


id: PBO:0034644
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_viability_upon_nitrogen_starvation","termid":"PBO:0034644"}


id: PBO:0045160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAH17 antisense RNA 1","termid":"PBO:0045160"}


id: PBO:0039998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 10","termid":"PBO:0039998"}


id: PATO:0000401
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000401 shape value (obsolete PATO:0000401)","termid":"PATO:0000401"}


id: SO:0001219
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that has been produced as the product of a reverse transcriptase mediated event.","direct_ancestors":[{"relation_name":"has_quality","term_name":"retrotransposed","termid":"SO:0000569"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrogene","termid":"SO:0001219"}


id: GO:0034655
data:
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id: MONDO:0022037
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malignant lymphoma characterized by the presence of immunoblasts with uniformly round-to-oval nuclei, one or more prominent nucleoli, and abundant cytoplasm. This class may be subdivided into plasmacytoid and clear-cell types based on cytoplasmic characteristics. A third category, pleomorphous, may be analogous to some of the peripheral T-cell lymphomas (LYMPHOMA, T-CELL, PERIPHERAL) recorded in both the United States and Japan.","definition_xrefs":["MESH:D016400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-Hodgkin lymphoma","termid":"MONDO:0018908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"large-cell immunoblastic lymphoma","secondary_identifiers":["MEDGEN:86955","UMLS:C0079746","GARD:8219"],"synonyms":[{"name":"Diffuse Immunoblastic Lymphosarcoma","type":"related"},{"name":"Diffuse Immunoblastic Lymphosarcomas","type":"related"},{"name":"Diffuse non-Hodgkin lymphoma, immunoblastic","type":"related"},{"name":"Diffuse non-Hodgkin's immunoblastic (diffuse) lymphoma","type":"related"},{"name":"Diffuse non-Hodgkin's lymphoma, immunoblastic","type":"related"},{"name":"Diffuse non-Hodgkin's lymphoma, immunoblastic (clinical)","type":"related"},{"name":"IMMUNOBLASTIC LARGE LYMPHOMA","type":"related"},{"name":"Immunoblastic Large Cell Lymphoma","type":"related"},{"name":"Immunoblastic Large-Cell Lymphoma","type":"related"},{"name":"Immunoblastic Large-Cell Lymphomas","type":"related"},{"name":"Immunoblastic Lymphoma","type":"related"},{"name":"Immunoblastic Lymphoma, Large-Cell","type":"related"},{"name":"Immunoblastic Lymphomas, Large-Cell","type":"related"},{"name":"Immunoblastic Lymphosarcoma, Diffuse","type":"related"},{"name":"Immunoblastic Lymphosarcomas, Diffuse","type":"related"},{"name":"Immunoblastic Sarcoma","type":"related"},{"name":"Immunoblastic Sarcomas","type":"related"},{"name":"Immunoblastic malignant lymphoma - large cell","type":"related"},{"name":"Immunoblastoma","type":"related"},{"name":"Immunoblastomas","type":"related"},{"name":"LARGE IMMUNOBLASTIC LYMPHOMA","type":"related"},{"name":"LYMPHOMA IMMUNOBLASTIC LARGE","type":"related"},{"name":"LYMPHOMA LARGE IMMUNOBLASTIC","type":"related"},{"name":"Large Cell Immunoblastic Lymphoma","type":"related"},{"name":"Large cell immunoblastic lymphoma","type":"related"},{"name":"Large-Cell Immunoblastic Lymphoma","type":"related"},{"name":"Large-Cell Immunoblastic Lymphomas","type":"related"},{"name":"Large-Cell Lymphoma, Immunoblastic","type":"related"},{"name":"Large-Cell Lymphomas, Immunoblastic","type":"related"},{"name":"Lymphoma, Immunoblastic Large-Cell","type":"related"},{"name":"Lymphoma, Immunoblastic, Large Cell","type":"related"},{"name":"Lymphoma, Immunoblastic, Large-Cell","type":"related"},{"name":"Lymphoma, Large Cell, Immunoblastic","type":"related"},{"name":"Lymphoma, Large-Cell Immunoblastic","type":"related"},{"name":"Lymphoma, Large-Cell, Immunoblastic","type":"related"},{"name":"Lymphoma, immunoblastic, high grade","type":"related"},{"name":"Lymphomas, Immunoblastic Large-Cell","type":"related"},{"name":"Lymphomas, Large-Cell Immunoblastic","type":"related"},{"name":"Lymphosarcoma, Diffuse Immunoblastic","type":"related"},{"name":"Lymphosarcomas, Diffuse Immunoblastic","type":"related"},{"name":"Malignant lymphoma - immunoblastic","type":"related"},{"name":"Sarcoma, Immunoblastic","type":"related"},{"name":"Sarcomas, Immunoblastic","type":"related"}],"termid":"MONDO:0022037","xrefs":{"Monarch":{"xref_id":"0022037"}}}


id: GO:0017025
data:
  {"annotated_genes":["SJAG_03095","SJAG_02174","SJAG_01523","SJAG_03900","SJAG_00650","SJAG_03120","SJAG_00692","SJAG_02458"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58423,67579,72228,72378,73785,77464,78583,79013],"is_not":false,"summary":null,"term":"GO:0017025"}]},"cv_name":"molecular_function","definition":"Binding to a member of the class of TATA-binding proteins (TBP), including any of the TBP-related factors (TRFs).","definition_xrefs":["PMID:16858867","GOC:txnOH","PMID:1509519","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"general transcription initiation factor binding","termid":"GO:0140296"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00650":null,"SJAG_00692":null,"SJAG_01523":null,"SJAG_02174":null,"SJAG_02458":null,"SJAG_03095":null,"SJAG_03120":null,"SJAG_03900":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"TBP-class protein binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"TATA-binding protein binding","type":"narrow"},{"name":"TBP binding","type":"narrow"},{"name":"TBP-related factor (TRF) protein binding","type":"narrow"}],"termid":"GO:0017025","terms_by_termid":{"GO:0017025":null}}


id: GO:0033706
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: L-quinate + NAD(P)+ = 3-dehydroquinate + NAD(P)H + H+, and shikimate + NAD(P)+ = 3-dehydroshikimate + NAD(P)H + H+.","definition_xrefs":["EC:1.1.1.282"],"gene_count":0,"genotype_count":0,"name":"obsolete quinate/shikimate dehydrogenase activity (obsolete GO:0033706)","synonyms":[{"name":"L-quinate:NAD(P)+ 3-oxidoreductase activity","type":"related"},{"name":"YdiB","type":"related"},{"name":"quinate/shikimate dehydrogenase activity","type":"exact"}],"termid":"GO:0033706"}


id: PBO:0000133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved protein","termid":"PBO:0000133"}


id: PBO:0058306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4679-2","termid":"PBO:0058306"}


id: GO:0035932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of aldosterone into the circulatory system. Aldosterone is a pregnane-based steroid hormone produced by the outer-section (zona glomerulosa) of the adrenal cortex in the adrenal gland, and acts on the distal tubules and collecting ducts of the kidney to cause the conservation of sodium, secretion of potassium, increased water retention, and increased blood pressure. The overall effect of aldosterone is to increase reabsorption of ions and water in the kidney.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"mineralocorticoid secretion","termid":"GO:0035931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"aldosterone secretion","termid":"GO:0035932"}


id: PBO:0074476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single-strand-selective monofunctional uracil-DNA glycosylase 1","termid":"PBO:0074476"}


id: GO:0021968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a pyramidal cell that is part of the corticospinal tract is directed after exiting the cerebral cortex through the internal capsule in response to a combination of attractive and repulsive cues.","definition_xrefs":["PMID:9878731","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"},{"relation_name":"part_of","term_name":"corticospinal neuron axon guidance","termid":"GO:0021966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corticospinal neuron axon guidance through the internal capsule","synonyms":[{"name":"corticospinal neuron axon pathfinding through the internal capsule","type":"exact"}],"termid":"GO:0021968"}


id: PBO:0041857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 4","termid":"PBO:0041857"}


id: PBO:0004992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Rrp45 (predicted)","termid":"PBO:0004992"}


id: PBO:0116605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-coding adipose anti-inflammatory","termid":"PBO:0116605"}


id: PBO:0083010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box protein required for 27S rRNA processing; exhibits DNA, RNA and DNA/RNA helicase activities; ATPase activity shows preference for DNA over RNA; DNA helicase activity abolished by mutation in RNA-binding domain","termid":"PBO:0083010"}


id: GO:0047865
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N,N-dimethylglycine + electron-transfer flavoprotein + H2O = sarcosine + formaldehyde + reduced electron-transfer flavoprotein.","definition_xrefs":["EC:1.5.8.4","RHEA:52856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, flavin as acceptor","termid":"GO:0046997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"dimethylglycine dehydrogenase activity","secondary_identifiers":["Reactome:R-HSA-6797653","MetaCyc:DIMETHYLGLYCINE-DEHYDROGENASE-RXN","KEGG_REACTION:R01565"],"synonyms":[{"name":"N,N-dimethylglycine oxidase activity","type":"related"},{"name":"N,N-dimethylglycine:(acceptor) oxidoreductase (demethylating)","type":"related"},{"name":"N,N-dimethylglycine:acceptor oxidoreductase (demethylating)","type":"related"}],"termid":"GO:0047865"}


id: PBO:0039157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 4 pseudogene 4","termid":"PBO:0039157"}


id: PBO:0083300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps 5' end of essential DED1 gene required for translation initiation","termid":"PBO:0083300"}


id: GO:0045829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of isotype switching.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immunoglobulin production","termid":"GO:0002638"},{"relation_name":"is_a","term_name":"negative regulation of immunoglobulin mediated immune response","termid":"GO:0002890"},{"relation_name":"is_a","term_name":"regulation of isotype switching","termid":"GO:0045191"},{"relation_name":"is_a","term_name":"negative regulation of DNA recombination","termid":"GO:0045910"},{"relation_name":"is_a","term_name":"negative regulation of B cell activation","termid":"GO:0050869"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"negatively_regulates","term_name":"isotype switching","termid":"GO:0045190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006310","GO:0010467"],"is_obsolete":false,"name":"negative regulation of isotype switching","synonyms":[{"name":"down regulation of isotype switching","type":"exact"},{"name":"down-regulation of isotype switching","type":"exact"},{"name":"downregulation of isotype switching","type":"exact"},{"name":"inhibition of isotype switching","type":"narrow"},{"name":"negative regulation of class switch recombination","type":"exact"},{"name":"negative regulation of class switching","type":"exact"},{"name":"negative regulation of isotype switch recombination","type":"exact"}],"termid":"GO:0045829"}


id: GO:2000780
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001033"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of double-strand break repair.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA repair","termid":"GO:0045738"},{"relation_name":"is_a","term_name":"regulation of double-strand break repair","termid":"GO:2000779"},{"relation_name":"negatively_regulates","term_name":"double-strand break repair","termid":"GO:0006302"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006281"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006281","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"negative regulation of double-strand break repair","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000780","terms_by_termid":{"GO:2001033":null}}


id: GO:0051031
data:
  {"annotated_genes":["SJAG_04083","SJAG_03156","SJAG_00178","SJAG_02661","SJAG_04622","SJAG_03358"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80310,107105,73895,107576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006409"},{"annotations":[80895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016031"},{"annotations":[81292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071528"}]},"cv_name":"biological_process","definition":"The directed movement of tRNA, transfer ribonucleic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA transport","termid":"GO:0050658"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00178":null,"SJAG_02661":null,"SJAG_03156":null,"SJAG_03358":null,"SJAG_04083":null,"SJAG_04622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"tRNA transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0051031","terms_by_termid":{"GO:0006409":null,"GO:0016031":null,"GO:0071528":null}}


id: GO:1901849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinate.","definition_xrefs":["GOC:yaf","UniPathway:UPA00830","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid biosynthetic process","termid":"GO:0009821"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"pyridine-containing compound biosynthetic process","termid":"GO:0072525"},{"relation_name":"is_a","term_name":"nicotinate metabolic process","termid":"GO:1901847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"nicotinate biosynthetic process","synonyms":[{"name":"nicotinate anabolism","type":"exact"},{"name":"nicotinate biosynthesis","type":"exact"},{"name":"nicotinate formation","type":"exact"},{"name":"nicotinate synthesis","type":"exact"}],"termid":"GO:1901849"}


id: PBO:0074906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 77B","termid":"PBO:0074906"}


id: PR:O14129
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rad55 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rhp55 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.03c","synonyms":[{"name":"RAD55 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rad55","type":"exact"}],"termid":"PR:O14129"}


id: PBO:0046046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit D","termid":"PBO:0046046"}


id: FYPO:0001981
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the rate, or speed, of DNA replication is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA replication","termid":"FYPO:0000217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000293","FYPO:0000002"],"is_obsolete":false,"name":"decreased rate of DNA replication","synonyms":[{"name":"reduced rate of DNA replication","type":"exact"}],"termid":"FYPO:0001981"}


id: PBO:0081213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger matrin-type 3","termid":"PBO:0081213"}


id: PBO:0045575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 28","termid":"PBO:0045575"}


id: PBO:0068883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 123, pseudogene","termid":"PBO:0068883"}


id: MOD:02019
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-timnodonoyl-L-lysine.","direct_ancestors":[{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"N-timnodonoylated residue","termid":"MOD:02020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"},{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01155","MOD:01875"],"is_obsolete":false,"name":"N6-timnodonoyl-L-lysine","termid":"MOD:02019"}


id: GO:0075147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism modulates the frequency, rate or extent of its signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of signal transduction in response to host (obsolete GO:0075147)","synonyms":[{"name":"regulation of symbiont signal transduction in response to host","type":"exact"}],"termid":"GO:0075147"}


id: MONDO:1011243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital nystagmus that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nystagmus, non-human animal","termid":"MONDO:1010325"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital nystagmus, dog","secondary_identifiers":["OMIA:000731-9615"],"termid":"MONDO:1011243","xrefs":{"Monarch":{"xref_id":"1011243"}}}


id: PBO:0055899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 20","termid":"PBO:0055899"}


id: PBO:0005543
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.57","termid":"PBO:0005543"}


id: PBO:0051413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 1-51","termid":"PBO:0051413"}


id: GO:0141113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the Wnt signaling pathway, planar cell polarity pathway.","definition_xrefs":["PMID:19056682"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of non-canonical Wnt signaling pathway","termid":"GO:2000051"},{"relation_name":"is_a","term_name":"regulation of Wnt signaling pathway, planar cell polarity pathway","termid":"GO:2000095"},{"relation_name":"negatively_regulates","term_name":"Wnt signaling pathway, planar cell polarity pathway","termid":"GO:0060071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of Wnt signaling pathway, planar cell polarity pathway","termid":"GO:0141113"}


id: MONDO:0025013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diseases of animals within the order primates. This term includes diseases of Haplorhini and Strepsirhini.","definition_xrefs":["MESH:D018419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-human primate disease","synonyms":[{"name":"Primate disease","type":"related"},{"name":"disease, Primate","type":"related"},{"name":"diseases, Primate","type":"related"}],"termid":"MONDO:0025013","xrefs":{"Monarch":{"xref_id":"0025013"}}}


id: GO:0090481
data:
  {"annotated_genes":["SJAG_04406","SJAG_04697","SJAG_04162","SJAG_01177","SJAG_00434"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76594,90183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097624"},{"annotations":[77739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072334"},{"annotations":[76798],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015786"},{"annotations":[114228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120112"},{"annotations":[79326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990569"},{"annotations":[67601],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015790"}]},"cv_name":"biological_process","definition":"The process in which a pyrimidine nucleotide-sugar is transported across a membrane. Pyrimidine nucleotide-sugars are pyrimidine nucleotides in glycosidic linkage with a monosaccharide or monosaccharide derivative.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar transmembrane transport","termid":"GO:0015780"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00434":null,"SJAG_01177":null,"SJAG_04162":null,"SJAG_04406":null,"SJAG_04697":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"pyrimidine nucleotide-sugar transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0015781"],"synonyms":[{"name":"pyrimidine nucleotide-sugar membrane transport","type":"exact"},{"name":"pyrimidine nucleotide-sugar transport","type":"related"}],"termid":"GO:0090481","terms_by_termid":{"GO:0015786":null,"GO:0015790":null,"GO:0072334":null,"GO:0097624":null,"GO:0120112":null,"GO:1990569":null}}


id: PBO:0082612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cofilin, involved in pH-dependent actin filament depolarization; binds both actin monomers and filaments and severs filaments; involved in the selective sorting, export of the secretory cargo from the late golgi; genetically interacts with pmr1; thought to be regulated by phosphorylation at SER4; ubiquitous and essential in eukaryotes","termid":"PBO:0082612"}


id: MONDO:0600019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acinar dysplasia in which the cause of the disease is a mutation in the TBX4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"acinar dysplasia","termid":"MONDO:0600016"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acinar dysplasia caused by mutation in TBX4","synonyms":[{"name":"TBX4 acinar dysplasia","type":"exact"},{"name":"TBX4 related acinar dysplasia","type":"exact"}],"termid":"MONDO:0600019","xrefs":{"Monarch":{"xref_id":"0600019"}}}


id: PBO:0080670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1","termid":"PBO:0080670"}


id: MONDO:0020855
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 32","secondary_identifiers":["DOID:0111925","MEDGEN:1648444","UMLS:C4748253","GARD:16292","OMIM:618115"],"synonyms":[{"name":"SPGF32","type":"exact"},{"name":"spermatogenic failure 32","type":"exact"}],"termid":"MONDO:0020855","xrefs":{"Monarch":{"xref_id":"0020855"}}}


id: SO:0001112
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A peptide region which hydrogen bonded to another region of peptide running in the oposite direction (one running N-terminal to C-terminal and one running C-terminal to N-terminal). Hydrogen bonding occurs between every other C=O from one strand to every other N-H on the adjacent strand. In this case, if two atoms C-alpha (i) and C-alpha (j) are adjacent in two hydrogen-bonded beta strands, then they form two mutual backbone hydrogen bonds to each other's flanking peptide groups; this is known as a close pair of hydrogen bonds. The peptide backbone dihedral angles (phi, psi) are about (-140 degrees, 135 degrees) in antiparallel sheets.","definition_xrefs":["EBIBS:GAR","UniProt:curation_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_strand","termid":"SO:0001111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"antiparallel_beta_strand","secondary_identifiers":["BS:0000341"],"synonyms":[{"name":"antiparallel beta strand","type":"exact"}],"termid":"SO:0001112"}


id: GO:0046594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of maintaining mRNA in a specific location in the oocyte pole plasm. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:bf","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of RNA location","termid":"GO:0051237"},{"relation_name":"is_a","term_name":"maintenance of location in cell","termid":"GO:0051651"},{"relation_name":"part_of","term_name":"pole plasm mRNA localization","termid":"GO:0019094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"maintenance of pole plasm mRNA location","secondary_identifiers":["GO:0048122"],"synonyms":[{"name":"maintenance of oocyte pole plasm mRNA localization","type":"exact"},{"name":"maintenance of pole plasm mRNA localization","type":"related"}],"termid":"GO:0046594"}


id: MONDO:0006065
data:
  {"annotated_genes":["SJAG_00857"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87332],"is_not":false,"summary":null,"term":"MONDO:0006065"}]},"cv_name":"mondo","definition":"Adult onset lactose intolerance","definition_xrefs":["EFO:1000063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactose intolerance","termid":"MONDO:0100345"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00857":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"lactose intolerance adult type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:223100","MEDGEN:75659","Orphanet:319681","UMLS:C0268181"],"synonyms":[{"name":"adult lactase deficiency","type":"exact"},{"name":"disaccharide intolerance 3","type":"exact"},{"name":"hypolactasia, adult type","type":"exact"},{"name":"lactase persistence/nonpersistence","type":"exact"},{"name":"lactose intolerance, ADULT type","type":"exact"}],"termid":"MONDO:0006065","terms_by_termid":{"MONDO:0006065":null},"xrefs":{"Monarch":{"xref_id":"0006065"}}}


id: FYPO:0007165
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell cortex does not occur during the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex during vegetative growth","termid":"FYPO:0000930"},{"relation_name":"is_a","term_name":"abolished protein localization during meiotic cell cycle","termid":"FYPO:0005208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to cell cortex during meiotic cell cycle","synonyms":[{"name":"protein absent from cell cortex during meiotic cell cycle","type":"related"},{"name":"protein localization to cell cortex abolished during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0007165"}


id: PBO:0072253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 28","termid":"PBO:0072253"}


id: PBO:0051703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INPP5B antisense RNA 1","termid":"PBO:0051703"}


id: GO:0006915
data:
  {"annotated_genes":["SJAG_03258","SJAG_00737"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75867,81340],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0043065"}]},"cv_name":"biological_process","definition":"A programmed cell death process which begins when a cell receives an internal (e.g. DNA damage) or external signal (e.g. an extracellular death ligand), and proceeds through a series of biochemical events (signaling pathway phase) which trigger an execution phase. The execution phase is the last step of an apoptotic process, and is typically characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died.","definition_xrefs":["GOC:tb","GOC:dhl","GOC:ecd","GOC:cjm","ISBN:0198506732","PMID:18846107","PMID:21494263","GOC:go_curators","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_03258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Wikipedia:Apoptosis","GO:0006917","GO:0008632","Reactome:R-HSA-109581"],"synonyms":[{"name":"activation of apoptosis","type":"narrow"},{"name":"apoptosis","type":"narrow"},{"name":"apoptosis activator activity","type":"related"},{"name":"apoptosis signaling","type":"narrow"},{"name":"apoptotic cell death","type":"exact"},{"name":"apoptotic program","type":"narrow"},{"name":"apoptotic programmed cell death","type":"exact"},{"name":"caspase-dependent programmed cell death","type":"related"},{"name":"cell suicide","type":"broad"},{"name":"cellular suicide","type":"broad"},{"name":"commitment to apoptosis","type":"related"},{"name":"induction of apoptosis","type":"related"},{"name":"induction of apoptosis by p53","type":"related"},{"name":"programmed cell death by apoptosis","type":"exact"},{"name":"signaling (initiator) caspase activity","type":"related"},{"name":"type I programmed cell death","type":"narrow"}],"termid":"GO:0006915","terms_by_termid":{"GO:0043065":null}}


id: GO:0036040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the polyphenol, curcumin.","definition_xrefs":["PMID:21467222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"curcumin metabolic process","termid":"GO:0036039"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"curcumin catabolic process","synonyms":[{"name":"(1E,6E)-1,7-bis(4-hydroxy-3-methoxyphenyl)hepta-1,6-diene-3,5-dione breakdown","type":"exact"},{"name":"(1E,6E)-1,7-bis(4-hydroxy-3-methoxyphenyl)hepta-1,6-diene-3,5-dione catabolic process","type":"exact"},{"name":"(1E,6E)-1,7-bis(4-hydroxy-3-methoxyphenyl)hepta-1,6-diene-3,5-dione catabolism","type":"exact"},{"name":"(1E,6E)-1,7-bis(4-hydroxy-3-methoxyphenyl)hepta-1,6-diene-3,5-dione degradation","type":"exact"},{"name":"curcumin breakdown","type":"exact"},{"name":"curcumin catabolism","type":"exact"},{"name":"curcumin degradation","type":"exact"},{"name":"diferuloylmethane breakdown","type":"exact"},{"name":"diferuloylmethane catabolic process","type":"exact"},{"name":"diferuloylmethane catabolism","type":"exact"},{"name":"diferuloylmethane degradation","type":"exact"},{"name":"turmeric yellow breakdown","type":"exact"},{"name":"turmeric yellow catabolic process","type":"exact"},{"name":"turmeric yellow catabolism","type":"exact"},{"name":"turmeric yellow degradation","type":"exact"}],"termid":"GO:0036040"}


id: PBO:0031518
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_binding_phenotype","termid":"PBO:0031518"}


id: FYPO:0008028
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the rate of acid phosphatase activation during phosphate starvation is decreased.","definition_xrefs":["PMID:35012333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of catalytic activity","termid":"FYPO:0004916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased rate of acid phosphatase activation during phosphate starvation","synonyms":[{"name":"decreased acid phosphatase kinetics","type":"exact"}],"termid":"FYPO:0008028"}


id: PBO:0027265
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_cell_cycle_arrest_in_mitotic_G1_phase_in_response_to_pheromone","termid":"PBO:0027265"}


id: PBO:0109810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTCL family member 3","termid":"PBO:0109810"}


id: PR:Q9HDW3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tfb5 gene.","definition_xrefs":["UniProtKB:Q9HDW3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II transcription factor B subunit 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.15","synonyms":[{"name":"Spom972h-tfb5","type":"exact"},{"name":"TFIIH subunit 5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"general transcription and DNA repair factor IIH subunit 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HDW3"}


id: PBO:0110236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rixosome complex/ Las1 complex endonuclease Las1","termid":"PBO:0110236"}


id: FYPO:0005503
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121353],"is_not":false,"summary":null,"term":"FYPO:0005503"}],"single_locus_phenotype":[{"annotations":[121347,121485,121486,121488],"is_not":false,"summary":null,"term":"FYPO:0005503"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is normally localized to both cell tips is instead found at only one tip.","definition_xrefs":["PMID:26749213","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip during vegetative growth","termid":"FYPO:0001584"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_01143":null,"SJAG_01794":null,"SJAG_02392":null,"SJAG_03581":null,"SJAG_03596":null,"SJAG_04280":null},"genotype_count":3,"genotypes_by_uniquename":{"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01143","SJAG_02392"],"name":"abnormally monopolar protein localization to cell tip","references_by_uniquename":{"PMID:25866389":null,"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_02392","SJAG_04280"],"single_locus_genotype_uniquenames":["wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","pom1delta"],"synonyms":[{"name":"abnormal monopolar protein localization to one cell end","type":"exact"},{"name":"abnormally monopolar protein localisation to cell tip","type":"exact"},{"name":"abnormally monopolar protein localization to cell end","type":"exact"},{"name":"abnormally monopolar protein localization to cell tip during mitotic cell cycle","type":"related"},{"name":"abnormally monopolar protein localization to cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0005503","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0005503":null}}


id: GO:0035317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level that results in the assembly, arrangement of constituent parts, or disassembly of an imaginal disc-derived wing hair. A wing hair is an actin-rich, polarized, non-sensory apical projection that protrudes from each of the approximately 30,000 wing epithelial cells. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","PMID:11064425","PMID:12540853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-sensory hair organization","termid":"GO:0035316"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing morphogenesis","termid":"GO:0007476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived wing hair organization","synonyms":[{"name":"imaginal disc-derived wing hair organization and biogenesis","type":"related"},{"name":"wing hair organisation","type":"exact"},{"name":"wing hair organization and biogenesis","type":"related"},{"name":"wing trichome organization and biogenesis","type":"exact"}],"termid":"GO:0035317"}


id: MONDO:0018223
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Systemic Epstein-Barr virus (EBV)-positive T-cell lymphoproliferative disease of childhood is a rare and very aggressive neoplastic disease emerging after a primary acute or chronic active EBV infection. It presents with persisting fever and malaise, hepatosplenomegaly with or without lymphadenopathy, liver failure, severe pancytopenia and a rapid progression towards multi-organ failure and hemophagocytic syndrome with a fatal issue. It is characterized by clonal proliferation of EBV-infected T cells with an activated cytotoxic phenotype.","definition_xrefs":["Orphanet:364033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature T-cell and NK-cell non-Hodgkin lymphoma","termid":"MONDO:0000430"},{"relation_name":"is_a","term_name":"immune system cancer","termid":"MONDO:0000621"},{"relation_name":"is_a","term_name":"pediatric lymphoma","termid":"MONDO:0003659"},{"relation_name":"is_a","term_name":"EBV-positive T-cell lymphoproliferative disorder of childhood","termid":"MONDO:0006188"},{"relation_name":"is_a","term_name":"Epstein-Barr virus-associated malignant lymphoproliferative disorder","termid":"MONDO:0017343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"systemic Epstein-Barr virus-positive T-cell lymphoproliferative disease of childhood","secondary_identifiers":["DOID:0070324","NCIT:C80374","MEDGEN:397492","UMLS:C2699747","GARD:21562","ICDO:9724/3","SCTID:721311006"],"synonyms":[{"name":"EBV-positive T-cell lymphoproliferative disorder of childhood","type":"broad"},{"name":"systemic EBV+ T-cell LPD of childhood","type":"exact"},{"name":"systemic EBV-positive T-cell lymphoma of childhood","type":"exact"},{"name":"systemic EBV-positive T-cell lymphoproliferative disease of childhood","type":"exact"},{"name":"systemic EBV-positive T-cell lymphoproliferative disorder of childhood","type":"exact"}],"termid":"MONDO:0018223","xrefs":{"Monarch":{"xref_id":"0018223"}}}


id: PBO:0070504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 3","termid":"PBO:0070504"}


id: PATO:0000503
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A phase which occurs during the light cycle.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phase","termid":"PATO:0000083"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"light phase","termid":"PATO:0000503"}


id: MONDO:0010540
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic disorder characterized by formation of bullae without traumatic origin, alopecia, hyperpigmentation, acrocyanosis, short stature, microcephaly, intellectual deficit, tapering fingers and nail abnormalities. Two families (one of whom was Dutch and the other Italian) have been described up to now, in which only males were affected. Transmission is X-linked recessive. The bullous dystrophy locus has been mapped to Xq26.3 in the Italian family and to Xq27.3 in the Dutch family.","definition_xrefs":["Orphanet:1867"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"excluded_subClassOf","term_name":"epidermal disease","termid":"MONDO:0019268"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bullous dystrophy, macular type","secondary_identifiers":["GARD:1038","OMIM:302000","MEDGEN:167089","UMLS:C0795974","MESH:C563065"],"synonyms":[{"name":"EBM","type":"related"},{"name":"bullous dystrophy hereditary macular type","type":"related"},{"name":"bullous dystrophy, hereditary macular type","type":"related"},{"name":"epidermolysis bullosa macular type","type":"related"},{"name":"epidermolysis bullosa, macular type","type":"related"}],"termid":"MONDO:0010540","xrefs":{"Monarch":{"xref_id":"0010540"}}}


id: MONDO:0042980
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"familial periodic paralysis","termid":"MONDO:0000995"},{"relation_name":"is_a","term_name":"Huntington disease","termid":"MONDO:0007739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"Westphal disease","secondary_identifiers":["UMLS:C1279186","GTR:AN0099344","GTR:AN0099345","GARD:5557","MEDGEN:224821","MESH:C536694","SCTID:182747006","GTR:AN0099343"],"synonyms":[{"name":"HD- Westphal variant","type":"related"},{"name":"Westphal disease","type":"exact"},{"name":"Westphal variant of Huntington's disease","type":"related"}],"termid":"MONDO:0042980","xrefs":{"Monarch":{"xref_id":"0042980"}}}


id: RO:0002005
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"innervated_by","termid":"RO:0002005"}


id: PATO:0000169
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An organismal quality inhering in a bearer or a population by virtue of the bearer's disposition to survive and develop normally or the number of surviving individuals in a given population.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organismal quality","termid":"PATO:0001995"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"viability","termid":"PATO:0000169"}


id: GO:0102743
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + eriodictyol + NADPH + O2 = 2-(3,4-dihydroxyphenyl)-5-hydroxy-4-oxo-4H-chromen-7-olate luteolin-7-olate(1-) + NADP + 2 H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete eriodictyol,NADPH:oxygen oxidoreductase activity (obsolete GO:0102743)","termid":"GO:0102743"}


id: PATO:0001778
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A strength which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"strength","termid":"PATO:0001230"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased strength","synonyms":[{"name":"high strength","type":"exact"}],"termid":"PATO:0001778"}


id: PBO:0069395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 655, pseudogene","termid":"PBO:0069395"}


id: PATO:0000143
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000143 addictive substance (obsolete PATO:0000143)","termid":"PATO:0000143"}


id: GO:1904112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of plus-end directed microfilament motor activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:25717181","GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of plus-end directed microfilament motor activity (obsolete GO:1904112)","synonyms":[{"name":"activation of barbed-end directed actin-filament motor activity","type":"narrow"},{"name":"activation of plus-end directed actin filament motor activity","type":"related"},{"name":"activation of plus-end directed actin-filament motor activity","type":"narrow"},{"name":"activation of plus-end directed microfilament motor activity","type":"narrow"},{"name":"positive regulation of barbed-end directed actin-filament motor activity","type":"exact"},{"name":"positive regulation of plus-end directed actin filament motor activity","type":"related"},{"name":"positive regulation of plus-end directed actin-filament motor activity","type":"exact"},{"name":"up regulation of barbed-end directed actin-filament motor activity","type":"exact"},{"name":"up regulation of plus-end directed actin filament motor activity","type":"related"},{"name":"up regulation of plus-end directed actin-filament motor activity","type":"exact"},{"name":"up regulation of plus-end directed microfilament motor activity","type":"exact"},{"name":"up-regulation of barbed-end directed actin-filament motor activity","type":"exact"},{"name":"up-regulation of plus-end directed actin filament motor activity","type":"related"},{"name":"up-regulation of plus-end directed actin-filament motor activity","type":"exact"},{"name":"up-regulation of plus-end directed microfilament motor activity","type":"exact"},{"name":"upregulation of barbed-end directed actin-filament motor activity","type":"exact"},{"name":"upregulation of plus-end directed actin filament motor activity","type":"related"},{"name":"upregulation of plus-end directed actin-filament motor activity","type":"exact"},{"name":"upregulation of plus-end directed microfilament motor activity","type":"exact"}],"termid":"GO:1904112"}


id: PBO:0018275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EVE domain (PUA-related) protein","termid":"PBO:0018275"}


id: FYPO:0008254
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 4 of histone H3 occurs to a greater extent than normal in regions containing protein-coding genes.","definition_xrefs":["PMID:25356590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K4 acetylation during vegetative growth","termid":"FYPO:0004238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0002494","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H3-K4 acetylation at protein coding gene during vegetative growth","termid":"FYPO:0008254"}


id: MONDO:0008328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"open-angle glaucoma","termid":"MONDO:0005338"},{"relation_name":"is_a","term_name":"hereditary glaucoma","termid":"MONDO:0018174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"glaucoma 1, open angle, P","secondary_identifiers":["MESH:C566748","UMLS:C3888338","OMIM:177700","MEDGEN:854866"],"synonyms":[{"name":"GLC1P","type":"related"},{"name":"glaucoma 1, open angle, P","type":"exact"},{"name":"glaucoma 1, open angle, type P","type":"exact"}],"termid":"MONDO:0008328","xrefs":{"Monarch":{"xref_id":"0008328"}}}


id: GO:0060791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process in which a sebaceous gland placode forms. A sebaceous gland placode is a thickening of the ectoderm that will give rise to the sebaceous gland bud.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal placode formation","termid":"GO:0060788"},{"relation_name":"part_of","term_name":"sebaceous gland development","termid":"GO:0048733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sebaceous gland placode formation","termid":"GO:0060791"}


id: PBO:0031260
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_late_endosome_to_vacuole_transport","termid":"PBO:0031260"}


id: PBO:0005843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein Pof7","termid":"PBO:0005843"}


id: MOD:01168
data:
  {"annotated_genes":["SJAG_00827"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[82446],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00793"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to dehydroalanine.","definition_xrefs":["PubMed:6838602","PubMed:10220322","PubMed:1547888","PubMed:8239649","RESID:AA0181","PubMed:1815586","PubMed:2914619","PubMed:7947813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00827":null},"genotype_count":0,"is_obsolete":false,"name":"dehydroalanine","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"2,3-didehydroalanine","type":"exact"},{"name":"2-aminoacrylic acid","type":"exact"},{"name":"2-aminopropenoic acid","type":"exact"},{"name":"4-methylidene-imidazole-5-one (MIO) active site","type":"exact"},{"name":"Dha","type":"exact"},{"name":"MOD_RES 2,3-didehydroalanine (Cys)","type":"exact"},{"name":"MOD_RES 2,3-didehydroalanine (Ser)","type":"exact"},{"name":"anhydroserine","type":"exact"},{"name":"dHAla","type":"exact"},{"name":"dehydroalanine","type":"exact"}],"termid":"MOD:01168","terms_by_termid":{"MOD:00793":null}}


id: MONDO:0017599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Splenic diffuse red pulp small B-cell lymphoma is a rare, indolent B-cell non-Hodgkin lymphoma characterized by abnormal proliferation of small, monomorphous, basophilic B-lymphocytes, with villous cytoplasm, in the splenic red pulp, bone marrow and peripheral blood. It typically presents in the late clinical stages with splenomegaly and moderate lymphocytosis. Cytopenias are rare and likely associated with hypersplenism.","definition_xrefs":["Orphanet:300869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"marginal zone lymphoma","termid":"MONDO:0017604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"splenic diffuse red pulp small B-cell lymphoma","secondary_identifiers":["icd11.foundation:1970934986","ICDO:9591/3","MEDGEN:397437","ONCOTREE:SDRPL","SCTID:763884007","UMLS:C2699508","GARD:21248","NCIT:C80309"],"synonyms":[{"name":"SDRPL","type":"exact"},{"name":"splenic diffuse red pulp lymphoma","type":"exact"}],"termid":"MONDO:0017599","xrefs":{"Monarch":{"xref_id":"0017599"}}}


id: GO:0021775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a ligand to the transmembrane receptor smoothened in a precursor cell in the ventral spinal cord that contributes to the commitment of the precursor cell to an interneuron fate.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph","GOC:jid","PMID:11262869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smoothened signaling pathway involved in ventral spinal cord patterning","termid":"GO:0021910"},{"relation_name":"part_of","term_name":"ventral spinal cord interneuron specification","termid":"GO:0021521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"smoothened signaling pathway involved in ventral spinal cord interneuron specification","synonyms":[{"name":"hedgehog signaling pathway involved in ventral spinal cord interneuron specification","type":"exact"},{"name":"hh signaling pathway involved in ventral spinal cord interneuron specification","type":"exact"},{"name":"smoothened signalling pathway involved in ventral spinal cord interneuron specification","type":"exact"}],"termid":"GO:0021775"}


