# terms

id: PBO:0053849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1118","termid":"PBO:0053849"}


id: PBO:0056947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 15a","termid":"PBO:0056947"}


id: MONDO:0030311
data:
  {"annotated_genes":["SJAG_00186"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88357],"is_not":false,"summary":null,"term":"MONDO:0030311"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"combined oxidative phosphorylation deficiency 52","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619386","MEDGEN:1780479","DOID:0070425","UMLS:C5543592"],"synonyms":[{"name":"COXPD52","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 52","type":"exact"}],"termid":"MONDO:0030311","terms_by_termid":{"MONDO:0030311":null},"xrefs":{"Monarch":{"xref_id":"0030311"}}}


id: PBO:0090172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin-dependent (CaMKK) protein kinase Ssp1","termid":"PBO:0090172"}


id: PR:Q9P7J5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATPase family AAA domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized AAA domain-containing protein C24B10.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.10c","secondary_identifiers":["UniProtKB:Q9P7J5"],"synonyms":[{"name":"Spom972h-ATAD1","type":"exact"}],"termid":"PR:Q9P7J5"}


id: PATO:0002451
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's exhibiting a phenotypic difference between males and females of the same species.","definition_xrefs":["PATOC:WC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organismal quality","termid":"PATO:0001995"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sexually dimorphic","termid":"PATO:0002451"}


id: MOD:00432
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Covalent modification of, or a change resulting in an alteration of the measured molecular mass of, a peptide or protein amino acid residue with a secondary loss of a neutral trihydrogen phosphate molecular fragment.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue with a secondary neutral loss","termid":"MOD:00431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified residue with neutral loss of phosphate","synonyms":[{"name":"dPhosModRes","type":"exact"}],"termid":"MOD:00432"}


id: PATO:0001025
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality that inheres in a bearer by virtue of the bearer's amount of force per unit area it exerts.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pressure","termid":"PATO:0001025"}


id: PBO:0046984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member H, pseudogene","termid":"PBO:0046984"}


id: PBO:0072062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S11","termid":"PBO:0072062"}


id: GO:0046131
data:
  {"annotated_genes":["SJAG_01673","SJAG_00694"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006216"},{"annotations":[75065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046132"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any ribonucleoside, a nucleoside in which pyrimidine base is linked to a ribose (beta-D-ribofuranose) molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside metabolic process","termid":"GO:0006213"},{"relation_name":"is_a","term_name":"ribonucleoside metabolic process","termid":"GO:0009119"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00694":null,"SJAG_01673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"pyrimidine ribonucleoside metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine ribonucleoside metabolism","type":"exact"}],"termid":"GO:0046131","terms_by_termid":{"GO:0006216":null,"GO:0046132":null}}


id: MONDO:0004324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that arises from the testis and is characterized by the presence of fusiform cells and collagenization.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular sex cord-stromal neoplasm","termid":"MONDO:0003125"},{"relation_name":"is_a","term_name":"fibroma","termid":"MONDO:0005167"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testicular fibroma","secondary_identifiers":["DOID:7675","UMLS:C1515282","MEDGEN:308256","NCIT:C39951"],"termid":"MONDO:0004324","xrefs":{"Monarch":{"xref_id":"0004324"}}}


id: FYPO:0001875
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the preferential localization of a protein to either the old or new spindle pole body is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000933"},{"relation_name":"is_a","term_name":"abnormal asymmetric protein localization, with protein localized to both mitotic spindle pole bodies","termid":"FYPO:0001874"},{"relation_name":"is_a","term_name":"decreased protein localization to spindle pole body","termid":"FYPO:0002770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased asymmetric protein localization, with protein localized to both mitotic spindle pole bodies","synonyms":[{"name":"decreased asymmetric protein localisation to old or new mitotic spindle pole body","type":"exact"},{"name":"decreased asymmetric protein localization to old or new mitotic SPB","type":"exact"},{"name":"decreased asymmetric protein localization to old or new mitotic spindle pole body","type":"exact"},{"name":"decreased asymmetric protein localization to old or new mitotic spindle pole body during mitotic cell cycle","type":"related"},{"name":"decreased asymmetric protein localization to old or new mitotic spindle pole body during vegetative growth","type":"exact"},{"name":"decreased occurrence of normally asymmetric protein localization to old or new mitotic spindle pole body","type":"exact"},{"name":"reduced asymmetric protein localization to old or new mitotic spindle pole body","type":"exact"}],"termid":"FYPO:0001875"}


id: GO:0030863
data:
  {"annotated_genes":["SJAG_03375","SJAG_00845","SJAG_00851","SJAG_02228","SJAG_00677","SJAG_01665","SJAG_03455","SJAG_02707","SJAG_02245","SJAG_00663","SJAG_01384","SJAG_03380","SJAG_00920","SJAG_03146","SJAG_04621","SJAG_02561","SJAG_02626","SJAG_01964","SJAG_04479","SJAG_03011","SJAG_04517","SJAG_01297","SJAG_00649","SJAG_03088","SJAG_01894","SJAG_04100","SJAG_05285","SJAG_02169","SJAG_03625","SJAG_01268","SJAG_00938","SJAG_02177","SJAG_02045","SJAG_02202","SJAG_04982","SJAG_00082","SJAG_02700","SJAG_04624","SJAG_00750","SJAG_00279","SJAG_02737","SJAG_02075","SJAG_02566","SJAG_00113","SJAG_03119","SJAG_02266","SJAG_01889","SJAG_01114","SJAG_02278","SJAG_00152","SJAG_04703","SJAG_00268","SJAG_03681","SJAG_04781","SJAG_01143","SJAG_00970","SJAG_03379","SJAG_04509","SJAG_04001","SJAG_03564","SJAG_01613","SJAG_01732","SJAG_03703","SJAG_02511","SJAG_04465","SJAG_00140","SJAG_02320","SJAG_03073","SJAG_03374","SJAG_04498","SJAG_02431","SJAG_01993","SJAG_02831","SJAG_03887","SJAG_04724","SJAG_01787","SJAG_03465","SJAG_00521","SJAG_02286","SJAG_00807","SJAG_04887","SJAG_04886","SJAG_04461","SJAG_04052","SJAG_02392","SJAG_02087","SJAG_02864","SJAG_04375","SJAG_03145","SJAG_03044","SJAG_00700","SJAG_01370","SJAG_03581","SJAG_02282","SJAG_01277","SJAG_04644","SJAG_03704","SJAG_03596","SJAG_04077","SJAG_01943","SJAG_00907","SJAG_00185","SJAG_03631","SJAG_04597","SJAG_00228","SJAG_02336","SJAG_00229","SJAG_01224","SJAG_02838","SJAG_01748","SJAG_03025","SJAG_03086"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97178],"is_not":false,"summary":null,"term":"GO:0030863"},{"annotations":[91178],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030478"},{"annotations":[94390,75693,76632,99530,70956,81934,106985,76995,89959,107175,110892,116739,92478,104558,103563,66058,73924,70961,104329,108864,112532,95457,113518,114013,59316,101491,114040,80881,81037,102735,104881,107850,78746,67318,79489,116175,64408,118024,120370,120734,114758,71846,76247,77767,69726,81323,78602,102767,112871,97096,108680],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030479"},{"annotations":[121147,120990,121144,121145,121146,120982,121148],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005826"},{"annotations":[103242,101018,93186,105697,110080,100423],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0055028"},{"annotations":[89564,113251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030981"},{"annotations":[97017,105560,99383],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903754"},{"annotations":[73090,71538,93717],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036286"},{"annotations":[92798],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032117"},{"annotations":[121498,92530,96390,91628,108722,120713,107179,121369,117757,89701,76684,100096,117673,91139,95634,103084,112606,121362,78057,121364,121367,103077,94350,119501,121371],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110085"},{"annotations":[102515,102350,110898,106972,119733],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120106"},{"annotations":[112647,115213,92577,102749,96753,105511,110899,119734,119751,91800,114157,90086,108030,99007,97659,98139,96217],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120105"},{"annotations":[81509,118801,94134,102778,79966,118894,110900,99459,105737,108872,58834,109968,101933,58302,99838],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120104"}]},"cv_name":"cellular_component","definition":"The portion of the cytoskeleton that lies just beneath the plasma membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton","termid":"GO:0005856"},{"relation_name":"part_of","term_name":"cell 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cytoskeleton","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:25866389":null,"PMID:27059155":null,"PMID:27734801":null,"PMID:28655757":null,"PMID:36148799":null},"termid":"GO:0030863","terms_by_termid":{"GO:0005826":null,"GO:0030478":null,"GO:0030479":null,"GO:0030863":null,"GO:0030981":null,"GO:0032117":null,"GO:0036286":null,"GO:0055028":null,"GO:0110085":null,"GO:0120104":null,"GO:0120105":null,"GO:0120106":null,"GO:1903754":null}}


id: FYPO:0000869
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone methylation occurs to a greater extent than normal. All histone methylation may be affected, or methylation of specific sites on specific histones may be increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methylation during vegetative growth","termid":"FYPO:0000457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased histone methylation during vegetative growth","synonyms":[{"name":"increased histone methylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000869"}


id: GO:0042708
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of elastin.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete elastase activity (obsolete GO:0042708)","synonyms":[{"name":"elastase activity","type":"exact"}],"termid":"GO:0042708"}


id: PBO:0001832
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.75","termid":"PBO:0001832"}


id: PATO:0000269
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000269 relative visual threshold (obsolete PATO:0000269)","termid":"PATO:0000269"}


id: MONDO:0014673
data:
  {"annotated_genes":["SJAG_00624"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86874],"is_not":false,"summary":null,"term":"MONDO:0014673"}]},"cv_name":"mondo","definition":"Any early-onset non-syndromic cataract in which the cause of the disease is a mutation in the LSS gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 44","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110267","GARD:16127","OMIM:616509","MEDGEN:907487","UMLS:C4225300"],"synonyms":[{"name":"CTRCT44","type":"exact"},{"name":"LSS early-onset non-syndromic cataract","type":"exact"},{"name":"cataract 44","type":"exact"},{"name":"cataract type 44","type":"exact"},{"name":"early-onset non-syndromic cataract caused by mutation in LSS","type":"exact"},{"name":"total early-onset cataract","type":"broad"}],"termid":"MONDO:0014673","terms_by_termid":{"MONDO:0014673":null},"xrefs":{"Monarch":{"xref_id":"0014673"}}}


id: PBO:0016092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein Mis20/Eic2","termid":"PBO:0016092"}


id: MONDO:0002643
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pathological processes of the vestibular labyrinth which contains part of the balancing apparatus. Patients with vestibular diseases show instability and are at risk of frequent falls.","definition_xrefs":["MESH:D015837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear disorder","termid":"MONDO:0002467"},{"relation_name":"is_a","term_name":"neuromuscular disease","termid":"MONDO:0019056"},{"relation_name":"is_a","term_name":"perceptual disorders","termid":"MONDO:0024417"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vestibular disorder","secondary_identifiers":["UMLS:C0042594","MEDGEN:12079","DOID:3426","EFO:0009691"],"synonyms":[{"name":"disease of vestibular labyrinth","type":"exact"},{"name":"disease of vestibular system","type":"exact"},{"name":"disease or disorder of vestibular labyrinth","type":"exact"},{"name":"disorder of vestibular labyrinth","type":"exact"},{"name":"disorder of vestibular system","type":"related"},{"name":"vertigo, vestibular disorder","type":"exact"},{"name":"vestibular labyrinth disease","type":"exact"},{"name":"vestibular labyrinth disease or disorder","type":"exact"},{"name":"vestibular system disease","type":"exact"}],"termid":"MONDO:0002643","xrefs":{"Monarch":{"xref_id":"0002643"}}}


id: PBO:0082816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved fungal protein with similarity to zinc carboxypeptidases; in some strains required for normal cell wall assembly","termid":"PBO:0082816"}


id: GO:0071555
data:
  {"annotated_genes":["SJAG_03631","SJAG_00974","SJAG_02590","SJAG_05001","SJAG_01453","SJAG_00218","SJAG_03295","SJAG_00667","SJAG_03646","SJAG_01181","SJAG_04620","SJAG_02446","SJAG_04595","SJAG_02845","SJAG_04868","SJAG_01017","SJAG_04073","SJAG_01835","SJAG_01227","SJAG_01321","SJAG_04462","SJAG_00163","SJAG_01888","SJAG_03444","SJAG_02192","SJAG_01290","SJAG_02649","SJAG_02733","SJAG_03013","SJAG_01171","SJAG_02718"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90515,92060,90026,93587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030476"},{"annotations":[109906,103763,103764,101969,90092,95832,90909,113169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904541"},{"annotations":[73068,78178,78546,72799,72835,104274,76256,76919,111896,79656,77019,79640,81307,81992,91149,77602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031505"},{"annotations":[73285,89409,112832],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0060237"}]},"cv_name":"biological_process","definition":"A process that results in the assembly, arrangement of constituent parts, or disassembly of the cell wall, the rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external encapsulating structure organization","termid":"GO:0045229"},{"relation_name":"is_a","term_name":"cell wall organization or biogenesis","termid":"GO:0071554"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00163":null,"SJAG_00218":null,"SJAG_00667":null,"SJAG_00974":null,"SJAG_01017":null,"SJAG_01171":null,"SJAG_01181":null,"SJAG_01227":null,"SJAG_01290":null,"SJAG_01321":null,"SJAG_01453":null,"SJAG_01835":null,"SJAG_01888":null,"SJAG_02192":null,"SJAG_02446":null,"SJAG_02590":null,"SJAG_02649":null,"SJAG_02718":null,"SJAG_02733":null,"SJAG_02845":null,"SJAG_03013":null,"SJAG_03295":null,"SJAG_03444":null,"SJAG_03631":null,"SJAG_03646":null,"SJAG_04073":null,"SJAG_04462":null,"SJAG_04595":null,"SJAG_04620":null,"SJAG_04868":null,"SJAG_05001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"cell wall organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0044234","GO:0007047"],"synonyms":[{"name":"cell wall organisation","type":"exact"},{"name":"cell wall organisation in other organism","type":"exact"},{"name":"cell wall organization and biogenesis","type":"related"},{"name":"cell wall organization at cellular level","type":"exact"},{"name":"cell wall organization in other organism","type":"exact"},{"name":"cellular cell wall organisation","type":"exact"},{"name":"cellular cell wall organization","type":"exact"}],"termid":"GO:0071555","terms_by_termid":{"GO:0030476":null,"GO:0031505":null,"GO:0060237":null,"GO:1904541":null}}


id: GO:0085036
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The space between the symbiont plasma membrane and the extrahaustorial membrane of the host.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"extracellular region","termid":"GO:0005576"},{"relation_name":"part_of","term_name":"host extracellular space","termid":"GO:0043655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"extrahaustorial matrix","termid":"GO:0085036"}


id: GO:0045263
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. All non-F1 subunits of a hydrogen-transporting ATP synthase, including integral and peripheral membrane proteins.","definition_xrefs":["PMID:10838056"],"gene_count":0,"genotype_count":0,"name":"obsolete proton-transporting ATP synthase complex, coupling factor F(o) (obsolete GO:0045263)","synonyms":[{"name":"hydrogen-transporting ATP synthase complex, coupling factor F(o)","type":"exact"},{"name":"hydrogen-transporting ATP synthase, F0 sector","type":"exact"},{"name":"hydrogen-transporting ATP synthase, coupling factor CF(0)","type":"narrow"},{"name":"proton-transporting ATP synthase complex, coupling factor F(0)","type":"exact"}],"termid":"GO:0045263"}


id: MONDO:0044630
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rere-related neurodevelopmental syndrome (obsolete MONDO:0044630)","termid":"MONDO:0044630","xrefs":{"Monarch":{"xref_id":"0044630"}}}


id: GO:0061403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a nitrosative stress stimulus. Nitrosative stress is a state often resulting from exposure to high levels of nitric oxide (NO) or the highly reactive oxidant peroxynitrite, which is produced following interaction of NO with superoxide anions.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to nitrosative stress (obsolete GO:0061403)","termid":"GO:0061403"}


id: PBO:0076161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUGT1P4-STRA6LP readthrough","termid":"PBO:0076161"}


id: PBO:0070477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 12","termid":"PBO:0070477"}


id: GO:1904183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of pyruvate dehydrogenase activity.","definition_xrefs":["GOC:dph","GO_REF:0000059","PMID:25525879","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of pyruvate dehydrogenase activity (obsolete GO:1904183)","synonyms":[{"name":"down regulation of pyruvate dehydrogenase activity","type":"exact"},{"name":"down regulation of pyruvic acid dehydrogenase activity","type":"exact"},{"name":"down regulation of pyruvic dehydrogenase activity","type":"exact"},{"name":"down-regulation of pyruvate dehydrogenase activity","type":"exact"},{"name":"down-regulation of pyruvic acid dehydrogenase activity","type":"exact"},{"name":"down-regulation of pyruvic dehydrogenase activity","type":"exact"},{"name":"downregulation of pyruvate dehydrogenase activity","type":"exact"},{"name":"downregulation of pyruvic acid dehydrogenase activity","type":"exact"},{"name":"downregulation of pyruvic dehydrogenase activity","type":"exact"},{"name":"inhibition of pyruvate dehydrogenase activity","type":"narrow"},{"name":"inhibition of pyruvic acid dehydrogenase activity","type":"narrow"},{"name":"inhibition of pyruvic dehydrogenase activity","type":"narrow"},{"name":"negative regulation of pyruvic acid dehydrogenase activity","type":"exact"},{"name":"negative regulation of pyruvic dehydrogenase activity","type":"exact"}],"termid":"GO:1904183"}


id: FYECO:0000373
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which thiolutin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ thiolutin","termid":"FYECO:0000373"}


id: PR:O13867
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A uracil phosphoribosyltransferase Upp that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02045","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil phosphoribosyltransferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.01c","secondary_identifiers":["UniProtKB:O13867"],"synonyms":[{"name":"Spom972h-upp","type":"exact"},{"name":"UMP pyrophosphorylase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"UPRTase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13867"}


id: PBO:0029232
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell_during_cellular_response_to_non-ionic_osmotic_stress","termid":"PBO:0029232"}


id: MONDO:0016605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic form of hypophosphatasia (HPP) characterized by markedly impaired bone mineralization in utero due to reduced activity of serum alkaline phosphatase (ALP) and causing stillbirth or respiratory failure within days of birth.","definition_xrefs":["Orphanet:247623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ALPL-related autosomal recessive hypophosphatasia","termid":"MONDO:0100609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"perinatal lethal hypophosphatasia","secondary_identifiers":["ICD10CM:E83.3","GARD:17191","MEDGEN:392928","UMLS:C2673477"],"synonyms":[{"name":"HPPN","type":"exact"},{"name":"hypophosphatasia, perinatal lethal","type":"related"},{"name":"perinatal lethal Rathburn disease","type":"exact"},{"name":"perinatal lethal phosphoethanolaminuria","type":"exact"}],"termid":"MONDO:0016605","xrefs":{"Monarch":{"xref_id":"0016605"}}}


id: PBO:0068875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 115, pseudogene","termid":"PBO:0068875"}


id: PBO:0073312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small EDRK-rich factor 1A pseudogene 1","termid":"PBO:0073312"}


id: FYPO:0003233
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 at heterochromatin islands is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0003232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal histone H3-K9 methylation at heterochromatin island during vegetative growth","synonyms":[{"name":"normal histone H3 K9 methylation at heterochromatin island during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at heterochromatin island during mitotic cell cycle","type":"related"},{"name":"normal histone H3K9me at heterochromatin island during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K9 methylation at heterochromatin island during vegetative growth","type":"exact"}],"termid":"FYPO:0003233"}


id: GO:0060825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands contributing to the anterior/posterior pattern of the neural plate.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"},{"relation_name":"part_of","term_name":"neural plate anterior/posterior regionalization","termid":"GO:0021999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","synonyms":[{"name":"fibroblast growth factor receptor signalling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"}],"termid":"GO:0060825"}


id: PBO:0016562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein Nap2","termid":"PBO:0016562"}


id: _global:located_in
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"a relation between two independent continuants, the target and the location, in which the target is entirely within the location","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"located_in","secondary_identifiers":["RO:0001025"],"termid":"_global:located_in"}


id: MONDO:0100146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Variants in the gene ATP6AP2 have been associated with a multitude of diseases, including X-linked syndromic ID Hedera type, X-linked Parkinsonism-spasticity syndrome, and congenital disorder of glycosylation type 2R. Phenotypes include global developmental delay, intellectual disability, progressive neurologic decline, spasticity, seizures, infantile onset of liver failure, recurrent infections, dysmorphic features, and features of parkinsonism (rigidity, resting tremor, bradykinesia). These phenotypes do not appear in all individuals with one of the above disease assertions, but many are overlapping phenotypes.","definition_xrefs":["PMID:15746149","PMID:26467484","PMID:26376863","PMID:23595882","PMID:30985297","PMID:29127204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP6AP2-related disorder","synonyms":[{"name":"ATP6AP2-related disorder","type":"exact"}],"termid":"MONDO:0100146","xrefs":{"Monarch":{"xref_id":"0100146"}}}


id: GO:0042966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the biotin carboxyl carrier protein, a subunit of acetyl-coenzyme A carboxylase.","definition_xrefs":["GOC:go_curators","PMID:8102363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"biotin carboxyl carrier protein biosynthetic process","synonyms":[{"name":"BCCP biosynthesis","type":"exact"},{"name":"BCCP biosynthetic process","type":"exact"},{"name":"biotin carboxyl carrier protein anabolism","type":"exact"},{"name":"biotin carboxyl carrier protein biosynthesis","type":"exact"},{"name":"biotin carboxyl carrier protein formation","type":"exact"},{"name":"biotin carboxyl carrier protein synthesis","type":"exact"}],"termid":"GO:0042966"}


id: MONDO:0003606
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the adrenal medulla","direct_ancestors":[{"relation_name":"is_a","term_name":"adrenal gland cancer","termid":"MONDO:0002817"},{"relation_name":"is_a","term_name":"adrenal medulla neoplasm","termid":"MONDO:0021237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adrenal medulla cancer","secondary_identifiers":["MEDGEN:87485","NCIT:C4396","UMLS:C0344456","DOID:5719","GARD:5755","SCTID:371965009"],"synonyms":[{"name":"adrenal medulla cancer","type":"exact"},{"name":"adrenal medulla neoplasm","type":"broad"},{"name":"adrenal medulla tumor","type":"broad"},{"name":"adrenal medulla tumour","type":"broad"},{"name":"cancer of adrenal medulla","type":"exact"},{"name":"malignant adrenal medulla neoplasm","type":"exact"},{"name":"malignant adrenal medulla tumor","type":"exact"},{"name":"malignant adrenal medulla tumour","type":"exact"},{"name":"malignant neoplasm of adrenal medulla","type":"exact"},{"name":"malignant neoplasm of the adrenal medulla","type":"exact"},{"name":"malignant tumor of adrenal medulla","type":"exact"},{"name":"malignant tumor of the adrenal medulla","type":"exact"},{"name":"malignant tumour of adrenal medulla","type":"exact"},{"name":"malignant tumour of the adrenal medulla","type":"exact"}],"termid":"MONDO:0003606","xrefs":{"Monarch":{"xref_id":"0003606"}}}


id: FYPO:0006793
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which the specificity between a meiotic driver gene and a drive suppressor gene differs from that observed when both genes are wild type. Meiotic drive results in the unequal transmission of alleles, haplotypes, or chromosomes from a parental genome to such that are unequally represented (i.e. the \\\"driver\\\" is overrepresented) among the surviving products of meiosis.","definition_xrefs":["PomBase:mah","PMID:30475921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal biological process","termid":"FYPO:0005447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"altered meiotic drive suppression specificity","synonyms":[{"name":"abnormal meiotic drive suppression specificity","type":"exact"},{"name":"abnormal specificity of suppression of meiotic drive","type":"exact"}],"termid":"FYPO:0006793"}


id: MONDO:0002922
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any skin disease that is pyegenic.","definition_xrefs":["Wikipedia:Pyoderma"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pyoderma","secondary_identifiers":["DOID:4223","ICD9:686.09","ICD9:686.00","ICD10CM:L08.0","ICD9:686.0","MESH:D011711","MEDGEN:18783","SCTID:70759006","UMLS:C0034212","icd11.foundation:1991248382"],"termid":"MONDO:0002922","xrefs":{"Monarch":{"xref_id":"0002922"}}}


id: PBO:0113201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methionine-R-sulfoxide reductase; reduces the R enantiomer of free Met-SO, in contrast to Ycl033Cp which reduces Met-R-SO in a peptide linkage; has a role in protection against oxidative stress; capable of binding and degrading patulin, a polyketide mycotoxin, forming E-ascladiol; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0113201"}


id: MONDO:0014110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early-onset non-syndromic cataract in which the cause of the disease is a mutation in the MIP gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 15 multiple types","secondary_identifiers":["MEDGEN:815331","OMIM:615274","DOID:0110251","UMLS:C3809001"],"synonyms":[{"name":"CTRCT15","type":"exact"},{"name":"MIP early-onset non-syndromic cataract","type":"exact"},{"name":"cataract 15, multiple types","type":"related"},{"name":"early-onset non-syndromic cataract caused by mutation in MIP","type":"exact"}],"termid":"MONDO:0014110","xrefs":{"Monarch":{"xref_id":"0014110"}}}


id: GO:0099117
data:
  {"annotated_genes":["SJAG_00851"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105566],"is_not":false,"summary":null,"term":"GO:0099117"}]},"cv_name":"biological_process","definition":"The movement of a protein along a microtubule to the cell-tip, mediated by motor proteins.","definition_xrefs":["PMID:15177031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport along microtubule","termid":"GO:0098840"},{"relation_name":"is_a","term_name":"protein localization to cell tip","termid":"GO:1990151"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00851":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"protein transport along microtubule to cell tip","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099117","terms_by_termid":{"GO:0099117":null}}


id: PBO:0062730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily B member 4","termid":"PBO:0062730"}


id: PBO:0091590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element (truncation) Wtf1","termid":"PBO:0091590"}


id: PBO:0081358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 184","termid":"PBO:0081358"}


id: PBO:0063518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDXDC2P-NPIPB14P readthrough, transcribed pseudogene","termid":"PBO:0063518"}


id: PBO:0073835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 7 member 11","termid":"PBO:0073835"}


id: FYPO:0006047
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the distance between sister kinetochores is smaller than normal before the onset of mitotic anaphase.","definition_xrefs":["PomBase:mah","PMID:27146110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"output_of","term_name":"abnormal centromere localization","termid":"FYPO:0001778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased interkinetochore distance before mitotic anaphase","synonyms":[{"name":"decreased distance between mitotic kinetochores","type":"related"},{"name":"decreased interkinetochore distance before anaphase during mitotic cell cycle","type":"related"},{"name":"decreased interkinetochore distance before anaphase onset","type":"exact"},{"name":"decreased interkinetochore distance before mitotic anaphase during vegetative growth","type":"exact"},{"name":"decreased kinetochore stretching before mitotic anaphase","type":"related"},{"name":"decreased sister kinetochore distance before mitotic anaphase","type":"exact"},{"name":"reduced interkinetochore distance before mitotic anaphase","type":"exact"}],"termid":"FYPO:0006047"}


id: MONDO:0013599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune enteropathy and endocrinopathy-susceptibility to chronic infections syndrome is an extremely rare, autosomal dominant immunological disorder characterized by variable enteropathy, endocrine disorders (e.g. type 1 diabetes mellitus, hypothyroidism), immune dysregulation with pulmonary and blood-borne bacterial infections, and fungal infections (chronic mucocutaneous candidiasis) developing in infancy. Other manifestations include short stature, eczema, hepatosplenomegaly, delayed puberty, and osteoporosis/osteopenia.","definition_xrefs":["Orphanet:391487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of endocrine system","termid":"MONDO:0000569"},{"relation_name":"is_a","term_name":"polyendocrinopathy","termid":"MONDO:0015126"},{"relation_name":"is_a","term_name":"chronic mucocutaneous candidiasis","termid":"MONDO:0015279"},{"relation_name":"is_a","term_name":"autoimmune enteropathy","termid":"MONDO:0019787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"autoimmune enteropathy and endocrinopathy - susceptibility to chronic infections syndrome","secondary_identifiers":["DOID:0111946","GARD:12314","MEDGEN:481620","UMLS:C3279990","OMIM:614162"],"synonyms":[{"name":"CANDF7","type":"related"},{"name":"IMD31C","type":"related"},{"name":"candidiasis familial chronic mucocutaneous, autosomal dominant","type":"related"},{"name":"candidiasis familial, 7","type":"related"},{"name":"candidiasis, familial chronic mucocutaneous, autosomal dominant","type":"related"},{"name":"candidiasis, familial, 7","type":"related"},{"name":"familial chronic mucocutaneous, autosomal dominant","type":"related"},{"name":"immunodeficiency 31C","type":"related"},{"name":"immunodeficiency 31C, chronic mucocutaneous candidiasis, autosomal dominant","type":"exact"},{"name":"immunodeficiency type 31C","type":"exact"}],"termid":"MONDO:0013599","xrefs":{"Monarch":{"xref_id":"0013599"}}}


id: PBO:0054715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2124","termid":"PBO:0054715"}


id: GO:0035425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signaling between cells of the same type. The signal produced by the signaling cell binds to a receptor on, and affects a cell of the same type.","definition_xrefs":["GOC:bf","ISBN:3527303782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"autocrine signaling","synonyms":[{"name":"autocrine signalling","type":"exact"}],"termid":"GO:0035425"}


id: GO:0046461
data:
  {"annotated_genes":["SJAG_02100","SJAG_02089","SJAG_01036","SJAG_02543","SJAG_03604"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76089],"is_not":false,"summary":null,"term":"GO:0046461"},{"annotations":[119447,73228,100279,93711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019433"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of neutral lipids, lipids only soluble in solvents of very low polarity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral lipid metabolic process","termid":"GO:0006638"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01036":null,"SJAG_02089":null,"SJAG_02100":null,"SJAG_02543":null,"SJAG_03604":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"neutral lipid catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"neutral lipid breakdown","type":"exact"},{"name":"neutral lipid catabolism","type":"exact"},{"name":"neutral lipid degradation","type":"exact"}],"termid":"GO:0046461","terms_by_termid":{"GO:0019433":null,"GO:0046461":null}}


id: PBO:0057555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR670 host gene","termid":"PBO:0057555"}


id: GO:1902075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a salt stimulus.","definition_xrefs":["PMID:16666921","GOC:mls","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to salt","termid":"GO:1902074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to salt","synonyms":[{"name":"cellular response to salinity","type":"narrow"}],"termid":"GO:1902075"}


id: PBO:0065240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 14","termid":"PBO:0065240"}


id: MONDO:0007525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited connective tissue disorder that is caused by defects in a protein called collagen. Common symptoms include severe joint hypermobility ; congenital hip dislocation; fragile, hyperextensible skin; hypotonia ; and kyphoscoliosis (kyphosis and scoliosis). EDS, arthrochalasia type is caused by changes (mutations) in the COL1A1 gene or the COL1A2 gene and is inherited in an autosomal dominant manner. Treatment and management is focused on preventing serious complications and relieving associated signs and symptoms.","definition_xrefs":["GARD:0002084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"COL1A1-related Ehlers-Danlos syndrome","termid":"MONDO:0100599"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, arthrochalasia type","secondary_identifiers":["OMIM:130060","SCTID:4170004","NANDO:1200650","NCIT:C125701","Orphanet:1899","MESH:C562625","UMLS:C4551623","DOID:0080727","GARD:2084","NANDO:2201260","MEDGEN:1645042"],"synonyms":[{"name":"AEDS","type":"related"},{"name":"EDS 7A","type":"narrow"},{"name":"EDS 7B","type":"narrow"},{"name":"EDS VII","type":"exact"},{"name":"EDS VII, mutant procollagen type","type":"related"},{"name":"EDS7A (formerly)","type":"related"},{"name":"EDSARTH1","type":"related"},{"name":"Ehlers-Danlos syndrome type 7","type":"exact"},{"name":"Ehlers-Danlos syndrome type 7A (formerly)","type":"related"},{"name":"Ehlers-Danlos syndrome, arthrochalasia type","type":"exact"},{"name":"Ehlers-Danlos syndrome, arthrochalasia type, 1","type":"related"},{"name":"Ehlers-Danlos syndrome, type VII","type":"exact"},{"name":"Ehlers-Danlos syndrome, type VII, autosomal dominant","type":"related"},{"name":"Ehlers-Danlos syndrome, type VIIA, autosomal dominant","type":"related"},{"name":"arthrochalasia EDS","type":"related"},{"name":"arthrochalasia Ehlers-Danlos syndrome","type":"related"},{"name":"arthrochalasis multiplex congenita","type":"related"}],"termid":"MONDO:0007525","xrefs":{"Monarch":{"xref_id":"0007525"}}}


id: PATO:0000784
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000784 excretory function value (obsolete PATO:0000784)","termid":"PATO:0000784"}


id: PBO:0005142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger containing protein Phf1","termid":"PBO:0005142"}


id: GO:0009744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sucrose stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to disaccharide","termid":"GO:0034285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to sucrose","synonyms":[{"name":"response to sucrose stimulus","type":"exact"}],"termid":"GO:0009744"}


id: PBO:0060252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYCL pseudogene 2","termid":"PBO:0060252"}


id: GO:0090072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the directed movement of sodium ions via the activity of voltage-gated sodium channels.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of sodium ion transport via voltage-gated sodium channel activity (obsolete GO:0090072)","synonyms":[{"name":"positive regulation of sodium ion transport via voltage-gated sodium channel activity","type":"exact"}],"termid":"GO:0090072"}


id: MONDO:1010143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Incontinentia pigmenti that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder, non-human animal","termid":"MONDO:1011308"},{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"disorder of visual system, non-human animal","termid":"MONDO:1011316"},{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incontinentia pigmenti, non-human animal","secondary_identifiers":["OMIA:001899"],"termid":"MONDO:1010143","xrefs":{"Monarch":{"xref_id":"1010143"}}}


id: PBO:0017487
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates","termid":"PBO:0017487"}


id: GO:0099170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process, acting in the postsynapse that results in modulation of chemical synaptic transmission.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"postsynaptic modulation of chemical synaptic transmission","termid":"GO:0099170"}


id: PBO:0067420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 538, pseudogene","termid":"PBO:0067420"}


id: GO:0032218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of riboflavin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Riboflavin (vitamin B2) is a water-soluble B-complex vitamin, converted in the cell to FMN and FAD, cofactors required for the function of flavoproteins.","definition_xrefs":["GOC:rn","PMID:16204239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"vitamin transport","termid":"GO:0051180"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"riboflavin transport","termid":"GO:0032218"}


id: MONDO:0020243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete colobomatous and areolar dystrophy (obsolete MONDO:0020243)","secondary_identifiers":["Orphanet:98665"],"termid":"MONDO:0020243","xrefs":{"Monarch":{"xref_id":"0020243"}}}


id: PBO:0070066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 23, pseudogene","termid":"PBO:0070066"}


id: MONDO:1010798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Ehlers-Danlos syndrome in cattle in which the cause of the disease is a mutation in the COL5A2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, non-human animal","termid":"MONDO:1011425"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, classic type, COL5A2-related, cattle","secondary_identifiers":["OMIA:002295-9913"],"synonyms":[{"name":"cEDS","type":"exact"}],"termid":"MONDO:1010798","xrefs":{"Monarch":{"xref_id":"1010798"}}}


id: MONDO:0021066
data:
  {"annotated_genes":["SJAG_01895","SJAG_01144","SJAG_02231","SJAG_03677","SJAG_03787","SJAG_00440","SJAG_00260","SJAG_03453","SJAG_01671"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"},{"annotations":[87947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0003789"},{"annotations":[88575,88574,88573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007763"},{"annotations":[88833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011121"},{"annotations":[87415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007273"},{"annotations":[87625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013602"},{"annotations":[88076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0001187"}]},"cv_name":"mondo","definition":"A benign or malignant, primary or metastatic neoplasm involving the urinary system. --2003","definition_xrefs":["NCIT:C3431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary system disorder","termid":"MONDO:0002118"},{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_00440":null,"SJAG_01144":null,"SJAG_01671":null,"SJAG_01895":null,"SJAG_02231":null,"SJAG_03453":null,"SJAG_03677":null,"SJAG_03787":null},"genotype_count":0,"is_obsolete":false,"name":"urinary system neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:239.5","ONCOTREE:BLADDER","SCTID:126879004","NCIT:C192666","UMLS:C0042076","MEDGEN:52949"],"synonyms":[{"name":"neoplasm of renal system","type":"exact"},{"name":"neoplasm of the urinary system","type":"exact"},{"name":"neoplasm of the urinary tract","type":"exact"},{"name":"neoplasm of urinary system","type":"exact"},{"name":"neoplasm of urinary tract","type":"exact"},{"name":"renal system neoplasm","type":"exact"},{"name":"renal system neoplasm (disease)","type":"exact"},{"name":"renal system tumor","type":"exact"},{"name":"renal system tumour","type":"exact"},{"name":"tumor of renal system","type":"exact"},{"name":"tumor of the urinary system","type":"exact"},{"name":"tumor of the urinary tract","type":"exact"},{"name":"tumor of urinary system","type":"exact"},{"name":"tumor of urinary tract","type":"exact"},{"name":"tumour of renal system","type":"exact"},{"name":"tumour of the urinary system","type":"exact"},{"name":"tumour of the urinary tract","type":"exact"},{"name":"tumour of urinary system","type":"exact"},{"name":"tumour of urinary tract","type":"exact"},{"name":"urinary system neoplasm","type":"exact"},{"name":"urinary system tumor","type":"exact"},{"name":"urinary system tumour","type":"exact"},{"name":"urinary tract neoplasm","type":"exact"},{"name":"urinary tract tumor","type":"exact"},{"name":"urinary tract tumour","type":"exact"}],"termid":"MONDO:0021066","terms_by_termid":{"MONDO:0001187":null,"MONDO:0003789":null,"MONDO:0007273":null,"MONDO:0007763":null,"MONDO:0011121":null,"MONDO:0013602":null,"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0021066"}}}


id: GO:0016811
data:
  {"annotated_genes":["SJAG_04467","SJAG_03775","SJAG_00450","SJAG_04939","SJAG_03013","SJAG_01416","SJAG_02766","SJAG_03627","SJAG_05287","SJAG_03844","SJAG_00811","SJAG_00476","SJAG_00964","SJAG_00691","SJAG_02276","SJAG_00392","SJAG_02618","SJAG_01987","SJAG_03227","SJAG_01231","SJAG_00581"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67053,90345,102159],"is_not":false,"summary":null,"term":"GO:0016811"},{"annotations":[116549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043530"},{"annotations":[93589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004099"},{"annotations":[95235,112937,65383,79393,80119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004359"},{"annotations":[64795,111317],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031078"},{"annotations":[111318],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032129"},{"annotations":[111319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140937"},{"annotations":[99027,111320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034739"},{"annotations":[111321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180032"},{"annotations":[111322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180033"},{"annotations":[72389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000225"},{"annotations":[111463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008936"},{"annotations":[74095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050152"},{"annotations":[106563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000224"},{"annotations":[68955,80664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008418"},{"annotations":[80246,80663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070773"},{"annotations":[73403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009039"},{"annotations":[63145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004848"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide.","definition_xrefs":["EC:3.5.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00450":null,"SJAG_00476":null,"SJAG_00581":null,"SJAG_00691":null,"SJAG_00811":null,"SJAG_00964":null,"SJAG_01231":null,"SJAG_01416":null,"SJAG_01987":null,"SJAG_02276":null,"SJAG_02618":null,"SJAG_02766":null,"SJAG_03013":null,"SJAG_03227":null,"SJAG_03627":null,"SJAG_03775":null,"SJAG_03844":null,"SJAG_04467":null,"SJAG_04939":null,"SJAG_05287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9673053","Reactome:R-HSA-9673054"],"termid":"GO:0016811","terms_by_termid":{"GO:0000224":null,"GO:0000225":null,"GO:0004099":null,"GO:0004359":null,"GO:0004848":null,"GO:0008418":null,"GO:0008936":null,"GO:0009039":null,"GO:0016811":null,"GO:0031078":null,"GO:0032129":null,"GO:0034739":null,"GO:0043530":null,"GO:0050152":null,"GO:0070773":null,"GO:0140937":null,"GO:0180032":null,"GO:0180033":null}}


id: PBO:0117073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE4D antisense RNA 1","termid":"PBO:0117073"}


id: GO:0046365
data:
  {"annotated_genes":["SJAG_02135","SJAG_02369","SJAG_03958","SJAG_00605","SJAG_02010","SJAG_04495","SJAG_03660","SJAG_03174","SJAG_04192","SJAG_02945","SJAG_03828","SJAG_01310","SJAG_04334","SJAG_06622","SJAG_02954","SJAG_00027","SJAG_02009","SJAG_02107","SJAG_06621","SJAG_04660","SJAG_00839","SJAG_00461","SJAG_04276","SJAG_03903","SJAG_02796","SJAG_02950","SJAG_03818","SJAG_02951","SJAG_03373"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102999,97566,96834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019568"},{"annotations":[100077,79584,111238,105202,74174,118208,107650,107282,107281,96338,111240,111241,111239,107280,107651,111236,111237,99806,105459,111235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[59004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019303"},{"annotations":[97567,96836,103000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042843"},{"annotations":[115579,115578,115572,115590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033499"},{"annotations":[120905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005998"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of monosaccharides, polyhydric alcohols containing either an aldehyde or a keto group and between three to ten or more carbon atoms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide metabolic process","termid":"GO:0005996"},{"relation_name":"is_a","term_name":"carbohydrate catabolic process","termid":"GO:0016052"},{"relation_name":"is_a","term_name":"small molecule catabolic process","termid":"GO:0044282"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02010":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_02950":null,"SJAG_02951":null,"SJAG_02954":null,"SJAG_03174":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03818":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_03958":null,"SJAG_04192":null,"SJAG_04276":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04660":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"monosaccharide catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"monosaccharide breakdown","type":"exact"},{"name":"monosaccharide catabolism","type":"exact"},{"name":"monosaccharide degradation","type":"exact"}],"termid":"GO:0046365","terms_by_termid":{"GO:0005998":null,"GO:0019303":null,"GO:0019568":null,"GO:0033499":null,"GO:0042843":null,"GO:0061621":null}}


id: PBO:0063508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDS5 cohesin associated factor A","termid":"PBO:0063508"}


id: PR:O94279
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A magnesium-dependent phosphatase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03815","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"magnesium-dependent phosphatase P8B7.31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.31","secondary_identifiers":["UniProtKB:O94279"],"synonyms":[{"name":"Spom972h-MDP1","type":"exact"}],"termid":"PR:O94279"}


id: FYPO:0003940
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which m7G(5')pppN diphosphatase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal m7G(5')pppN diphosphatase activity","termid":"FYPO:0003939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abolished m7G(5')pppN diphosphatase activity","synonyms":[{"name":"abolished mRNA decapping activity","type":"related"},{"name":"m7G(5')pppN diphosphatase activity abolished","type":"exact"}],"termid":"FYPO:0003940"}


id: MONDO:0019386
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurological disorder arising from primary rubella infection of the brain, characterized by chronic encephalitis. It is believed to be due to a persistence or reactivation of rubella virus infection. It usually manifesting between 8–19 years of age.","definition_xrefs":["Wikipedia:Progressive_rubella_panencephalitis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rubella encephalitis","termid":"MONDO:0020648"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive rubella panencephalitis","secondary_identifiers":["UMLS:C1305924","ICD10EXP:G05.1*","SCTID:10082001","Orphanet:83616","MEDGEN:726815","GARD:19043","ICD10EXP:B06.0+"],"synonyms":[{"name":"rubella panencephalitis","type":"related"}],"termid":"MONDO:0019386","xrefs":{"Monarch":{"xref_id":"0019386"}}}


id: MONDO:0020132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic central nervous system malformation (obsolete MONDO:0015219)","termid":"MONDO:0015219"}],"gene_count":0,"genotype_count":0,"name":"obsolete cranial nerve and nuclear aplasia (obsolete MONDO:0020132)","secondary_identifiers":["Orphanet:98518"],"termid":"MONDO:0020132","xrefs":{"Monarch":{"xref_id":"0020132"}}}


id: MONDO:0020363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"superficial corneal dystrophy","termid":"MONDO:0020212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"honey-droplet corneal dystrophy","secondary_identifiers":["MEDGEN:573075","icd11.foundation:896313309","Orphanet:98958","GARD:19609","UMLS:C0339300"],"termid":"MONDO:0020363","xrefs":{"Monarch":{"xref_id":"0020363"}}}


id: PBO:0083787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein involved in rRNA and snoRNA maturation; competes with TLC1 RNA for binding to Est2p, suggesting a role in negative regulation of telomerase; human homolog inhibits telomerase; contains a G-patch RNA interacting domain","termid":"PBO:0083787"}


id: GO:0102418
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: luteolin 7-O-beta-D-glucoside + UDP-alpha-D-glucose = luteolin-7-O-gentiobioside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete luteolin-7-O-glucoside 1,6-glucosyltransferase activity (obsolete GO:0102418)","termid":"GO:0102418"}


id: MONDO:0004497
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A stage of syphilis that occurs fifteen to thirty years after the initial infection; it can include gumma formation and cardiovascular or central nervous system involvement (neurosyphilis).","definition_xrefs":["NCIT:C128414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syphilis","termid":"MONDO:0005976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tertiary syphilis","secondary_identifiers":["DOID:8200","ICD9:095.9","ICD9:095.8","UMLS:C0153188","ICD10CM:A52","ICD9:097.0","MEDGEN:56297","MESH:C536774","SCTID:72083004"],"synonyms":[{"name":"late syphilis","type":"exact"},{"name":"late tertiary syphilis","type":"exact"},{"name":"tertiary syphilis","type":"exact"}],"termid":"MONDO:0004497","xrefs":{"Monarch":{"xref_id":"0004497"}}}


id: MONDO:0002373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign proliferative neoplasm made up of epithelial and mesenchymal cells of the mesothelium which make up part of the serosal covering and lining of various organ surfaces within the body.","definition_xrefs":["PMID:30285380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesothelioma","termid":"MONDO:0005065"},{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign mesothelioma","secondary_identifiers":["ICD9:215.9","ICD10CM:C45","SCTID:254825007","MEDGEN:578420","DOID:2645","NCIT:C3234","UMLS:C0348424","MESH:D008654"],"synonyms":[{"name":"benign tumor of mesothelial tissue","type":"exact"},{"name":"benign tumor of mesothelium","type":"exact"},{"name":"benign tumour of mesothelial tissue","type":"exact"},{"name":"benign tumour of mesothelium","type":"exact"},{"name":"mesothelioma, benign","type":"exact"}],"termid":"MONDO:0002373","xrefs":{"Monarch":{"xref_id":"0002373"}}}


id: PBO:0033799
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_subtelomeric_heterochromatin","termid":"PBO:0033799"}


id: GO:0007192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adenylate cyclase-activating G protein-coupled receptor signaling pathway initiated by serotonin binding to its receptor, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:signaling","GOC:dph","GOC:tb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-activating G protein-coupled receptor signaling pathway","termid":"GO:0007189"},{"relation_name":"is_a","term_name":"serotonin receptor signaling pathway","termid":"GO:0007210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"adenylate cyclase-activating serotonin receptor signaling pathway","synonyms":[{"name":"activation of adenylate cyclase activity by serotonin receptor signalling pathway","type":"related"},{"name":"serotonin receptor, adenylate cyclase activating pathway","type":"related"},{"name":"serotonin receptor, adenylyl cyclase activating pathway","type":"exact"}],"termid":"GO:0007192"}


id: GO:0018137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a peptidyl cysteine-peptidyl glycine cross-link by the condensation of a cysteine thiol with the carbonyl of the preceding residue and alpha-beta dehydrogenation.","definition_xrefs":["RESID:AA0241"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via glycine thiazolecarboxylic acid (obsolete GO:0018137)","termid":"GO:0018137"}


id: PBO:0069987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1282, pseudogene","termid":"PBO:0069987"}


id: PATO:0001214
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001214 temparature_unit (obsolete PATO:0001214)","termid":"PATO:0001214"}


id: GO:0035291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of the characteristic structures of the intercalary segment of the anterior head, following establishment of segment boundaries. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["ISBN:0878932437","PMID:10477305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of segmental identity, head","termid":"GO:0007380"},{"relation_name":"part_of","term_name":"anterior head segmentation","termid":"GO:0035288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of segmental identity, intercalary segment","termid":"GO:0035291"}


id: GO:0034692
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that comprises three core spliceosomal proteins, designated E, F, and G. Formation of the E.F.G complex is essential but not sufficient for the formation of a stable U1 snRNP complex.","definition_xrefs":["PMID:8641291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"E.F.G complex","termid":"GO:0034692"}


id: MONDO:0013892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glomerulonephritis characterized by C3 accumulation with little or absent deposition of immunoglobulin, in the absence of ultrastructural electron-dense transformation seen in dense deposit disease.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary nephritis","termid":"MONDO:0005334"},{"relation_name":"is_a","term_name":"non-immunoglobulin-mediated membranoproliferative glomerulonephritis","termid":"MONDO:0018013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"C3 glomerulonephritis","secondary_identifiers":["OMIM:614809","Orphanet:329931","UMLS:C4055342","MEDGEN:884569","NCIT:C123043","GARD:16487"],"synonyms":[{"name":"CFHR5 deficiency","type":"related"},{"name":"complement-mediated membranoproliferative glomerulonephritis","type":"exact"},{"name":"nephropathy due to CFHR5 deficiency","type":"exact"}],"termid":"MONDO:0013892","xrefs":{"Monarch":{"xref_id":"0013892"}}}


id: GO:0045457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of ecdysteroids, a group of polyhydroxylated ketosteroids which initiate post-embryonic development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hormone secretion","termid":"GO:0035929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"ecdysteroid secretion","termid":"GO:0045457"}


id: GO:0061960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, or rate of heme oxygenase activity.","definition_xrefs":["GOC:rph","PMID:24844779","GOC:BHF","GOC:BHF_miRNA"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of heme oxygenase activity (obsolete GO:0061960)","termid":"GO:0061960"}


id: GO:0060816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global inactivation of all, or most of, the genes on either the paternal or maternal X-chromosome in the XX sex.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb","PMID:32189388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dosage compensation by inactivation of X chromosome","termid":"GO:0009048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0006325","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"random inactivation of X chromosome","synonyms":[{"name":"rXCI","type":"related"}],"termid":"GO:0060816"}


id: MONDO:0000299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with Thelazia.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rhabditida infectious disease","termid":"MONDO:0005943"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thelaziasis","secondary_identifiers":["icd11.foundation:1803398353","ICD9:128.8","MEDGEN:576041","SCTID:46477004","UMLS:C0344058","DOID:0050261"],"synonyms":[{"name":"Thelazia caused disease or disorder","type":"exact"},{"name":"Thelazia disease or disorder","type":"exact"},{"name":"Thelazia infectious disease","type":"exact"},{"name":"conjunctival spirurosis","type":"related"},{"name":"infection by Thelazia","type":"exact"},{"name":"infection caused by Thelazia","type":"related"},{"name":"thelaziasis","type":"exact"},{"name":"thelaziosis","type":"related"},{"name":"verminous ophthalmia","type":"related"}],"termid":"MONDO:0000299","xrefs":{"Monarch":{"xref_id":"0000299"}}}


id: GO:1901930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of alpha-copaene.","definition_xrefs":["GOC:TermGenie","PMID:22867794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene catabolic process","termid":"GO:0051763"},{"relation_name":"is_a","term_name":"alpha-copaene metabolic process","termid":"GO:1901929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"alpha-copaene catabolic process","synonyms":[{"name":"alpha-copaene breakdown","type":"exact"},{"name":"alpha-copaene catabolism","type":"exact"},{"name":"alpha-copaene degradation","type":"exact"}],"termid":"GO:1901930"}


id: GO:0070293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A renal system process in which water, ions, glucose and proteins are taken up from the collecting ducts, glomerulus and proximal and distal loops of the nephron. In non-mammalian species, absorption may occur in related structures (e.g. protein absorption is observed in nephrocytes in Drosophila, see PMID:23264686).","definition_xrefs":["GOC:mah","GOC:yaf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system process","termid":"GO:0003014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal absorption","synonyms":[{"name":"nephron absorption","type":"exact"},{"name":"renal reabsorption","type":"exact"}],"termid":"GO:0070293"}


id: GO:0102772
data:
  {"annotated_genes":["SJAG_04913","SJAG_05311"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74257,93627],"is_not":false,"summary":null,"term":"GO:0102772"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a dihydroceramide + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = a phytoceramide + 2 Fe(III)-[cytochrome b5] + H2O.","definition_xrefs":["GOC:pz","EC:1.14.18.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen","termid":"GO:0016716"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04913":null,"SJAG_05311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"sphingolipid C4-monooxygenase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-428260","RHEA:55808","MetaCyc:RXN-14250"],"synonyms":[{"name":"sphingolipid long-chain base 4-hydroxylase activity","type":"related"}],"termid":"GO:0102772","terms_by_termid":{"GO:0102772":null}}


id: PBO:0052040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JunD proto-oncogene, AP-1 transcription factor subunit","termid":"PBO:0052040"}


id: FYECO:0000273
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing salts, water, a nitrogen source but no glucose.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, no glucose","termid":"FYECO:0000273"}


id: PBO:0064045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 79","termid":"PBO:0064045"}


id: PBO:0066369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol dehydrogenase 12","termid":"PBO:0066369"}


id: PBO:0059388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S23 pseudogene 1","termid":"PBO:0059388"}


id: GO:0044205
data:
  {"annotated_genes":["SJAG_03164","SJAG_00444","SJAG_00197","SJAG_00964","SJAG_00694"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57334,59484,59858,61710,62707],"is_not":false,"summary":null,"term":"GO:0044205"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of UMP, uridine monophosphate, starting with the synthesis of (S)-dihydroorotate from bicarbonate; UMP biosynthesis may either occur via reduction by quinone, NAD+ or oxygen.","definition_xrefs":["GOC:ecd","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UMP biosynthetic process","termid":"GO:0006222"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00444":null,"SJAG_00694":null,"SJAG_00964":null,"SJAG_03164":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"'de novo' UMP biosynthetic process","references_by_uniquename":{"GO_REF:0000041":null},"synonyms":[{"name":"'de novo' UMP biosynthesis","type":"exact"}],"termid":"GO:0044205","terms_by_termid":{"GO:0044205":null}}


id: MONDO:0019136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any infection due to a fungus of the Zygomycota phylum. The disease typically involves the rhino-facial-cranial area, lungs, gastrointestinal tract, skin, or less commonly other organ systems. The infecting fungi have a predilection for invading vessels of the arterial system, causing embolization and subsequent necrosis of surrounding tissue.","definition_xrefs":["NCIT:C77212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opportunistic mycosis","termid":"MONDO:0002312"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zygomycosis","secondary_identifiers":["GARD:10224","ICD10CM:B46","SCTID:59277005","icd11.foundation:1676389165","ICD9:117.7","MedDRA:10028098","UMLS:C0043541","MESH:D009091","DOID:8485","EFO:0007380","MedDRA:10061418","NORD:1946","Orphanet:73263","SCTID:76627001","MEDGEN:12207","MESH:D020096"],"synonyms":[{"name":"Mucormycosis","type":"exact"},{"name":"Zygomycota infectious disease","type":"exact"},{"name":"mucormycosis","type":"exact"}],"termid":"MONDO:0019136","xrefs":{"Monarch":{"xref_id":"0019136"}}}


id: MONDO:0013415
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 17p deletion","termid":"MONDO:0022754"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 17p13.1 deletion syndrome","secondary_identifiers":["OMIM:613776","DOID:0060402","MEDGEN:462419","UMLS:C3151069"],"synonyms":[{"name":"17p13.1 deletion syndrome","type":"related"},{"name":"chromosome 17p13.1 deletion syndrome","type":"exact"}],"termid":"MONDO:0013415","xrefs":{"Monarch":{"xref_id":"0013415"}}}


id: GO:0043772
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl phosphate + sn-glycerol 3-phosphate = 1-acyl-sn-glycerol 3-phosphate + orthophosphate.","definition_xrefs":["PMID:17308305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acyl-phosphate glycerol-3-phosphate acyltransferase activity","synonyms":[{"name":"acyl-phosphate:glycerol-3-phosphate acyltransferase activity","type":"exact"},{"name":"acylphosphate glycerol-3-phosphate acyltransferase activity","type":"exact"},{"name":"acylphosphate:glycerol-3-phosphate acyltransferase activity","type":"exact"}],"termid":"GO:0043772"}


id: PBO:0028744
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0028744"}


id: PR:O94511
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A very-long-chain enoyl-CoA reductase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02643","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enoyl reductase C646.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC646.07c","secondary_identifiers":["UniProtKB:O94511"],"synonyms":[{"name":"Spom972h-TECR","type":"exact"}],"termid":"PR:O94511"}


id: GO:0008179
data:
  {"annotated_genes":["SJAG_01754"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72028],"is_not":false,"summary":null,"term":"GO:0008179"}]},"cv_name":"molecular_function","definition":"Binding to an adenylate cyclase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"adenylate cyclase binding","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-170672"],"synonyms":[{"name":"adenylyl cyclase binding","type":"exact"}],"termid":"GO:0008179","terms_by_termid":{"GO:0008179":null}}


id: PBO:0050407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein C pseudogene 9","termid":"PBO:0050407"}


id: PBO:0070673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 44","termid":"PBO:0070673"}


id: SO:0001341
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"4_demethylwyosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"four_demethylwyosine","secondary_identifiers":["RNAMOD:100"],"synonyms":[{"name":"4-demethylwyosine","type":"exact"},{"name":"four demethylwyosine","type":"exact"},{"name":"imG-14","type":"exact"}],"termid":"SO:0001341"}


id: PBO:0081769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 701","termid":"PBO:0081769"}


id: GO:0071112
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha4-beta4 integrin complex bound to EMILIN-1 (ElastinMicrofibril Interface Located ProteIN).","definition_xrefs":["PMID:12456677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"alpha4-beta4 integrin-EMILIN-1 complex","synonyms":[{"name":"ITGA4-ITGB4-EMILIN1 complex","type":"narrow"}],"termid":"GO:0071112"}


id: MONDO:0009566
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Marfanoid habitus B intellectual deficit, autosomal recessive is a very rare multiple congenital anomalies syndrome described in four sibs and characterized by intellectual deficit, flat face and some skeletelal features of Marfan syndrome such as tall stature, dolichostenomelia, arm span larger than height, arachnodactyly of hands and feet, little subcutaneous fat, muscle hypotonia and intellectual deficit.","definition_xrefs":["Orphanet:2463"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"marfanoid habitus-autosomal recessive intellectual disability syndrome","secondary_identifiers":["MESH:C565410","OMIM:248770","UMLS:C1855347","GARD:3388","MEDGEN:343326"],"synonyms":[{"name":"MARFANOID intellectual disability syndrome, autosomal","type":"related"},{"name":"MARFANOID mental retardation syndrome, autosomal","type":"related"},{"name":"Marfanoid intellectual disability syndrome autosomal","type":"related"},{"name":"Marfanoid mental retardation syndrome autosomal","type":"related"}],"termid":"MONDO:0009566","xrefs":{"Monarch":{"xref_id":"0009566"}}}


id: PBO:0070622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 like 1 pseudogene 6","termid":"PBO:0070622"}


id: POMBASE_GENE_EX_REL:regulates_activity_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_activity_of","termid":"POMBASE_GENE_EX_REL:regulates_activity_of"}


id: GO:0050900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a leukocyte within or between different tissues and organs of the body.","definition_xrefs":["GOC:add","PMID:14680625","ISBN:0781735149","PMID:14708592","PMID:7507411","PMID:8600538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte migration","secondary_identifiers":["Reactome:R-HSA-202733"],"synonyms":[{"name":"immune cell migration","type":"exact"},{"name":"immune cell trafficking","type":"exact"},{"name":"leucocyte migration","type":"exact"},{"name":"leucocyte trafficking","type":"exact"},{"name":"leukocyte trafficking","type":"exact"}],"termid":"GO:0050900"}


id: GO:0000354
data:
  {"annotated_genes":["SJAG_04230"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[119690],"is_not":false,"summary":null,"term":"GO:0000354"}]},"cv_name":"biological_process","definition":"Assembly of a spliceosomal complex containing the intact pre-mRNA and all of the spliceosomal snRNPs. This occurs when the tri-snRNP associates with the pre-mRNA and associated snRNPs in an ATP-dependent manner.","definition_xrefs":["GOC:krc","GOC:mtg_mpo","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"spliceosomal complex assembly","termid":"GO:0000245"},{"relation_name":"part_of","term_name":"mRNA cis splicing, via spliceosome","termid":"GO:0045292"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04230":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016071","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"cis assembly of pre-catalytic spliceosome","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000360","GO:0000361"],"synonyms":[{"name":"cis assembly of U12-type pre-catalytic spliceosome","type":"narrow"},{"name":"cis assembly of U2-type pre-catalytic spliceosome","type":"narrow"},{"name":"formation of spliceosomal A2-1 complex","type":"narrow"},{"name":"formation of spliceosomal B1 complex","type":"narrow"},{"name":"spliceosomal A2-1 complex biosynthesis","type":"narrow"},{"name":"spliceosomal A2-1 complex formation","type":"narrow"},{"name":"spliceosomal B1 complex biosynthesis","type":"narrow"},{"name":"spliceosomal B1 complex formation","type":"narrow"}],"termid":"GO:0000354","terms_by_termid":{"GO:0000354":null}}


id: MONDO:0007659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete giant platelet syndrome with thrombocytopenia (obsolete MONDO:0007659)","secondary_identifiers":["OMIM:137560","MESH:C564237"],"termid":"MONDO:0007659","xrefs":{"Monarch":{"xref_id":"0007659"}}}


id: MONDO:0020468
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paternal uniparental disomy of chromosome 13 is an uniparental disomy of paternal origin that most likely does not have any phenotypic expression except from cases of homozygosity for a recessive disease mutation for which only father is a carrier.","definition_xrefs":["Orphanet:99324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 13 disorder","termid":"MONDO:0700020"},{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paternal uniparental disomy of chromosome 13","secondary_identifiers":["MEDGEN:1653904","UMLS:C4722326","GARD:19678","icd11.foundation:2090405609"],"synonyms":[{"name":"UPD(13)pat","type":"exact"},{"name":"paternal uniparental disomy of chromosome type 13","type":"exact"}],"termid":"MONDO:0020468","xrefs":{"Monarch":{"xref_id":"0020468"}}}


id: MONDO:0000975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign adipose tissue neoplasm of the spermatic cord. This is the most common tumor amongst the benign paratesticular lesions.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign male reproductive system neoplasm","termid":"MONDO:0000625"},{"relation_name":"is_a","term_name":"paratesticular lipoma","termid":"MONDO:0000976"},{"relation_name":"is_a","term_name":"male reproductive system neoplasm","termid":"MONDO:0024582"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoma of spermatic cord","secondary_identifiers":["NCIT:C3606","SCTID:93162007","UMLS:C0153972","MEDGEN:102299","DOID:10206","ICD9:214.4"],"synonyms":[{"name":"lipoma of spermatic cord","type":"exact"},{"name":"lipoma of the spermatic cord","type":"exact"},{"name":"spermatic cord lipoma","type":"exact"}],"termid":"MONDO:0000975","xrefs":{"Monarch":{"xref_id":"0000975"}}}


id: GO:0005731
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A region of a chromosome where nucleoli form during interphase, and where genes encoding the largest rRNA precursor transcript are tandemly arrayed.","definition_xrefs":["PMID:14504406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleolar chromatin","termid":"GO:0030874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0005730","GO:0005694"],"is_obsolete":false,"name":"nucleolus organizer region","secondary_identifiers":["Wikipedia:Nucleolus_organizer_region"],"synonyms":[{"name":"NOR","type":"exact"},{"name":"nucleolus organiser region","type":"exact"},{"name":"nucleolus organizer complex","type":"related"}],"termid":"GO:0005731"}


id: PBO:0069285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 541, pseudogene","termid":"PBO:0069285"}


id: PBO:0066856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 156","termid":"PBO:0066856"}


id: PBO:0070381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho associated coiled-coil containing protein kinase 2","termid":"PBO:0070381"}


id: PBO:0055975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat kinase 1","termid":"PBO:0055975"}


id: GO:0072327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a nematode vulval cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed. In nematodes, the vulva is formed from ventral epidermal cells during larval stages to give rise to a fully formed adult vulva, which is the egg-laying organ of female and hermaphrodite nematodes.","definition_xrefs":["ISBN:087969307X","GOC:kmv","GOC:mah","PMID:11236714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"vulval cell fate commitment","termid":"GO:0072325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vulval cell fate specification","termid":"GO:0072327"}


id: GO:0075161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont G-protein alpha subunit-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of G-protein alpha subunit-mediated signal transduction in response to host (obsolete GO:0075161)","synonyms":[{"name":"negative regulation of symbiont G-protein alpha subunit-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075161"}


id: FYPO:0002751
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of sulfate ions into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sulfate import","termid":"FYPO:0002750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased sulfate import","synonyms":[{"name":"decreased sulfate import across plasma membrane","type":"exact"},{"name":"decreased sulfate import during mitotic cell cycle","type":"related"},{"name":"decreased sulfate import during vegetative growth","type":"exact"},{"name":"decreased sulfate import into cell","type":"exact"},{"name":"decreased sulfate ion import","type":"exact"},{"name":"decreased sulfate uptake","type":"exact"},{"name":"decreased sulphate import","type":"exact"},{"name":"decreased sulphate ion import","type":"exact"},{"name":"reduced sulfate import","type":"exact"}],"termid":"FYPO:0002751"}


id: PBO:0056166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic arrest deficient 2 like 1 pseudogene 1","termid":"PBO:0056166"}


id: GO:0008302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Recruitment and organization of actin filaments in female germline ring canals.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament organization","termid":"GO:0007015"},{"relation_name":"part_of","term_name":"female germline ring canal formation","termid":"GO:0007301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"female germline ring canal formation, actin assembly","synonyms":[{"name":"nurse cell ring canal formation, actin assembly","type":"narrow"},{"name":"ovarian ring canal formation, actin assembly","type":"narrow"},{"name":"ring canal formation, actin assembly","type":"broad"}],"termid":"GO:0008302"}


id: GO:0045883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sulfur utilization.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sulfur utilization","termid":"GO:0006792"},{"relation_name":"is_a","term_name":"positive regulation of response to nutrient levels","termid":"GO:0032109"},{"relation_name":"positively_regulates","term_name":"sulfur utilization","termid":"GO:0006791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sulfur utilization","synonyms":[{"name":"activation of sulfur utilization","type":"narrow"},{"name":"positive regulation of sulphur utilization","type":"exact"},{"name":"stimulation of sulfur utilization","type":"narrow"},{"name":"up regulation of sulfur utilization","type":"exact"},{"name":"up-regulation of sulfur utilization","type":"exact"},{"name":"upregulation of sulfur utilization","type":"exact"}],"termid":"GO:0045883"}


id: MONDO:0009156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, congenital limb malformation disorder characterized by hypoplasia or absence of central digital rays of the hands and/or feet and the presence of one or more, unilateral or bilateral, supernumerary digits on postaxial rays, ranging from hypoplastic digits devoid of osseous structures to complete duplication of a digit. Cutaneous syndactyly, symphalangism and clinodactyly have also been reported. There have been no further descriptions in the literature since 1982.","definition_xrefs":["Orphanet:1892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectrodactyly-polydactyly syndrome","secondary_identifiers":["GARD:2068","UMLS:C1857040","OMIM:225290","MEDGEN:384042","MESH:C565601"],"synonyms":[{"name":"ectrodactyly polydactyly","type":"exact"},{"name":"ectrodactyly-polydactyly","type":"exact"}],"termid":"MONDO:0009156","xrefs":{"Monarch":{"xref_id":"0009156"}}}


id: PBO:0056255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mal, T cell differentiation protein like","termid":"PBO:0056255"}


id: PBO:0074846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 36C","termid":"PBO:0074846"}


id: GO:0010836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of protein ADP-ribosylation. Protein ADP-ribosylation is the transfer, from NAD, of ADP-ribose to protein amino acids.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein ADP-ribosylation","termid":"GO:0010835"},{"relation_name":"is_a","term_name":"negative regulation of transferase activity","termid":"GO:0051348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein ADP-ribosylation","synonyms":[{"name":"negative regulation of protein amino acid ADP-ribosylation","type":"exact"}],"termid":"GO:0010836"}


id: PBO:0017600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCF complex and CLRC ubiquitin ligase ligase E3 subunit Rbx1","termid":"PBO:0017600"}


id: GO:0035968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of sterol import, by regulation of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:12077145","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of sterol import by regulation of transcription from RNA polymerase II promoter (obsolete GO:0035968)","synonyms":[{"name":"regulation of sterol import by regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of sterol influx by regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of sterol influx by regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of sterol uptake by regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of sterol uptake by regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0035968"}


id: GO:0033373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protease is maintained in a secretory granule in a mast cell and prevented from moving elsewhere.","definition_xrefs":["GOC:dph","GOC:tb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein location in mast cell secretory granule","termid":"GO:0033370"},{"relation_name":"part_of","term_name":"protease localization to mast cell secretory granule","termid":"GO:0033368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of protease location in mast cell secretory granule","synonyms":[{"name":"maintenance of protease localization in mast cell secretory granule","type":"related"},{"name":"mast cell protease retention","type":"exact"}],"termid":"GO:0033373"}


id: MONDO:1012728
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Junctional epidermolysis bullosa that occurs in sheep due to a mutation in the LAMC2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"junctionalis epidermolysis bullosa , non-human animal","termid":"MONDO:1011426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junctional epidermolysis bullosa, LAMC2-related, sheep","secondary_identifiers":["OMIA:001678-9940"],"synonyms":[{"name":"Herlitz type junctional epidermolysis bullosa, sheep","type":"related"},{"name":"epidermolysis bullosa, junctionalis, LAMC2-related, sheep","type":"exact"}],"termid":"MONDO:1012728","xrefs":{"Monarch":{"xref_id":"1012728"}}}


id: GO:0097152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a mesenchymal cell. A mesenchymal cell is a loosely associated cell that is part of the connective tissue in an organism. Mesenchymal cells give rise to more mature connective tissue cell types.","definition_xrefs":["PMID:18231833","GOC:mtg_apoptosis","GOC:yaf","CL:0000134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell apoptotic process","synonyms":[{"name":"mesenchymal cell apoptosis","type":"narrow"}],"termid":"GO:0097152"}


id: PBO:0044876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 5A","termid":"PBO:0044876"}


id: PBO:0072674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RTRAF pseudogene 1","termid":"PBO:0072674"}


id: PBO:0089121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl peptidase, unknown specificity, implicated in glutathione metabolism","termid":"PBO:0089121"}


id: FYPO:0005720
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromosome recapture is normal (i.e. indistinguishable from wild type) during metaphase of mitosis. Chromosome recapture is the reattachment of chromosomes which have become detached from the spindle.","definition_xrefs":["PMID:17881496","GO:1990942","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal mitotic metaphase chromosome recapture","synonyms":[{"name":"normal chromosome recapture during mitotic metaphase","type":"exact"},{"name":"normal kinetochore retrieval in mitotic metaphase","type":"exact"},{"name":"normal mitotic kinetochore retrieval","type":"exact"},{"name":"normal mitotic metaphase chromosome recapture during vegetative growth","type":"exact"},{"name":"normal mitotic metaphase chromosome retrieval to SPB","type":"exact"},{"name":"normal mitotic metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"normal mitotic sister kinetochore recapture","type":"exact"}],"termid":"FYPO:0005720"}


id: GO:0110085
data:
  {"annotated_genes":["SJAG_00663","SJAG_02864","SJAG_03379","SJAG_02431","SJAG_04498","SJAG_03145","SJAG_01114","SJAG_01665","SJAG_03374","SJAG_03596","SJAG_00750","SJAG_04621","SJAG_00807","SJAG_00938","SJAG_03887","SJAG_02831","SJAG_00185","SJAG_00677","SJAG_00082","SJAG_02169","SJAG_05285","SJAG_03088","SJAG_03025","SJAG_04703","SJAG_03625","SJAG_03564","SJAG_02278","SJAG_01143","SJAG_00268","SJAG_02838","SJAG_02266","SJAG_03681","SJAG_04509","SJAG_00228","SJAG_04461","SJAG_01889","SJAG_00229","SJAG_01943","SJAG_04597","SJAG_03703","SJAG_03631","SJAG_03581","SJAG_04375","SJAG_00845","SJAG_02392","SJAG_01277","SJAG_00279","SJAG_04077","SJAG_01787","SJAG_02737","SJAG_02320","SJAG_04887","SJAG_03704"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76684,78057,89701,91139,91628,92530,94350,95634,96390,100096,103077,103084,107179,108722,112606,117673,117757,119501,120713,121362,121364,121367,121369,121371,121498],"is_not":false,"summary":null,"term":"GO:0110085"},{"annotations":[110898,119733,106972,102350,102515],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120106"},{"annotations":[102749,98139,96217,114157,96753,119751,99007,97659,90086,115213,108030,110899,119734,92577,112647,91800,105511],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120105"},{"annotations":[58302,105737,58834,79966,99838,99459,101933,108872,110900,81509,109968,102778,118894,94134,118801],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120104"}]},"cv_name":"cellular_component","definition":"A cytoskeletal structure composed of actin filaments, myosin, and myosin-associated proteins that forms beneath the plasma membrane of many cells, including animal cells and yeast cells, in a plane perpendicular to the axis of the mitotic spindle, i.e. the cell division plane. Ring contraction is associated with centripetal growth of the membrane that divides the cytoplasm of the two future daughter cells. In animal cells, the mitotic contractile ring is located inside the plasma membrane at the location of the cleavage furrow. In budding fungal cells, e.g. mitotic S. cerevisiae cells, the mitotic contractile ring forms beneath the plasma membrane at the mother-bud neck before mitosis.","definition_xrefs":["GOC:vw","PMID:27505246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actomyosin contractile ring","termid":"GO:0005826"}],"gene_count":53,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00185":null,"SJAG_00228":null,"SJAG_00229":null,"SJAG_00268":null,"SJAG_00279":null,"SJAG_00663":null,"SJAG_00677":null,"SJAG_00750":null,"SJAG_00807":null,"SJAG_00845":null,"SJAG_00938":null,"SJAG_01114":null,"SJAG_01143":null,"SJAG_01277":null,"SJAG_01665":null,"SJAG_01787":null,"SJAG_01889":null,"SJAG_01943":null,"SJAG_02169":null,"SJAG_02266":null,"SJAG_02278":null,"SJAG_02320":null,"SJAG_02392":null,"SJAG_02431":null,"SJAG_02737":null,"SJAG_02831":null,"SJAG_02838":null,"SJAG_02864":null,"SJAG_03025":null,"SJAG_03088":null,"SJAG_03145":null,"SJAG_03374":null,"SJAG_03379":null,"SJAG_03564":null,"SJAG_03581":null,"SJAG_03596":null,"SJAG_03625":null,"SJAG_03631":null,"SJAG_03681":null,"SJAG_03703":null,"SJAG_03704":null,"SJAG_03887":null,"SJAG_04077":null,"SJAG_04375":null,"SJAG_04461":null,"SJAG_04498":null,"SJAG_04509":null,"SJAG_04597":null,"SJAG_04621":null,"SJAG_04703":null,"SJAG_04887":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0070938"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005575","GO:0015629","GO:0005938","GO:0070938","GO:0005737"],"is_obsolete":false,"name":"mitotic actomyosin contractile ring","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:25866389":null,"PMID:36148799":null},"termid":"GO:0110085","terms_by_termid":{"GO:0110085":null,"GO:0120104":null,"GO:0120105":null,"GO:0120106":null}}


id: GO:0046354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mannan, the main hemicellulose of soft (coniferous) wood, made up of D-mannose, D-glucose and D-galactose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannan metabolic process","termid":"GO:0010412"},{"relation_name":"is_a","term_name":"cell wall polysaccharide biosynthetic process","termid":"GO:0070592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"mannan biosynthetic process","synonyms":[{"name":"mannan anabolism","type":"exact"},{"name":"mannan biosynthesis","type":"exact"},{"name":"mannan formation","type":"exact"},{"name":"mannan synthesis","type":"exact"}],"termid":"GO:0046354"}


id: PBO:0072013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 15","termid":"PBO:0072013"}


id: MONDO:0032724
data:
  {"annotated_genes":["SJAG_03864"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87923],"is_not":false,"summary":null,"term":"MONDO:0032724"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia with joint laxity","termid":"MONDO:0019675"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03864":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia with joint laxity, type 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618395","GARD:16348","Orphanet:642085","MEDGEN:1677378","DOID:0112200","UMLS:C5193073"],"synonyms":[{"name":"SEMDJL3","type":"exact"},{"name":"SPONDYLOEPIMETAPHYSEAL DYSPLASIA WITH JOINT LAXITY, TYPE 3","type":"related"},{"name":"spondyloepimetaphyseal dysplasia with joint laxity, EXOC6b type","type":"exact"}],"termid":"MONDO:0032724","terms_by_termid":{"MONDO:0032724":null},"xrefs":{"Monarch":{"xref_id":"0032724"}}}


id: PBO:0004337
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-consensus GC donor","termid":"PBO:0004337"}


id: FYPO:0004778
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of farnesyltranstransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal farnesyltranstransferase activity","termid":"FYPO:0004777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"decreased farnesyltranstransferase activity","synonyms":[{"name":"reduced farnesyltranstransferase activity","type":"exact"}],"termid":"FYPO:0004778"}


id: PATO:0002387
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Extremely acute and aggressive onset of a pathological process.","definition_xrefs":["PATOC:PNS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute","termid":"PATO:0000389"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peracute","synonyms":[{"name":"per-acute","type":"exact"}],"termid":"PATO:0002387"}


id: GO:0010174
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a nucleoside, from one side of a membrane to the other, up a concentration gradient.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside transmembrane transporter activity","termid":"GO:0005337"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"nucleoside transmembrane transporter activity, against a concentration gradient","synonyms":[{"name":"concentrative nucleoside transporter activity","type":"exact"}],"termid":"GO:0010174"}


id: PBO:0074305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLX4 interacting protein","termid":"PBO:0074305"}


id: GO:1990843
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A mitochondrion that occurs adjacent to the sarcolemma in striated muscle cells and responds in distinct ways to physiological triggers.","definition_xrefs":["PMID:26039174","PMID:23297307"],"gene_count":0,"genotype_count":0,"name":"obsolete subsarcolemmal mitochondrion (obsolete GO:1990843)","synonyms":[{"name":"SS mitochondrion","type":"exact"},{"name":"SSM","type":"exact"}],"termid":"GO:1990843"}


id: MONDO:0013872
data:
  {"annotated_genes":["SJAG_04885","SJAG_00997"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89129,89130],"is_not":false,"summary":null,"term":"MONDO:0013872"}]},"cv_name":"mondo","definition":"Any familial prostate cancer in which the cause of the disease is a mutation in the ELAC2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostate cancer, hereditary","termid":"MONDO:0700275"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00997":null,"SJAG_04885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate cancer, hereditary, 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614731","GARD:15839","UMLS:C3539120","MEDGEN:761328"],"synonyms":[{"name":"ELAC2 familial prostate cancer","type":"exact"},{"name":"HPC2","type":"related"},{"name":"familial prostate cancer caused by mutation in ELAC2","type":"exact"},{"name":"prostate cancer, hereditary, 2","type":"exact"},{"name":"prostate cancer, hereditary, 2, susceptibility to","type":"exact"},{"name":"prostate cancer, hereditary, type 2","type":"exact"}],"termid":"MONDO:0013872","terms_by_termid":{"MONDO:0013872":null},"xrefs":{"Monarch":{"xref_id":"0013872"}}}


id: MONDO:0021002
data:
  {"annotated_genes":["SJAG_01213"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010408"}]},"cv_name":"mondo","definition":"A disease characterized by the presence of syndactyly, including syndromic and non-syndromic forms.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01213":null},"genotype_count":0,"is_obsolete":false,"name":"syndactyly","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:52619","ICD9:755.1","UMLS:C0039075","MESH:D013576","HP:0001159","ICD10CM:Q70","MedDRA:10042778","DOID:11193"],"synonyms":[{"name":"syndactyly (disease)","type":"exact"}],"termid":"MONDO:0021002","terms_by_termid":{"MONDO:0010408":null},"xrefs":{"Monarch":{"xref_id":"0021002"}}}


id: GO:0009636
data:
  {"annotated_genes":["SJAG_01596","SJAG_03497","SJAG_01973","SJAG_02276","SJAG_04063","SJAG_00141","SJAG_04399","SJAG_04632","SJAG_01344","SJAG_04242","SJAG_04788","SJAG_01199","SJAG_05181","SJAG_01351","SJAG_04516","SJAG_03494","SJAG_02630","SJAG_01457","SJAG_03476","SJAG_04726","SJAG_02247","SJAG_04608","SJAG_03363","SJAG_01651","SJAG_03951","SJAG_04823","SJAG_03288","SJAG_03108","SJAG_04953","SJAG_03166","SJAG_02988","SJAG_02106","SJAG_04125","SJAG_02599","SJAG_01995","SJAG_03623","SJAG_00219","SJAG_03316","SJAG_00419","SJAG_01145","SJAG_00489","SJAG_00988","SJAG_06611","SJAG_01078","SJAG_04674","SJAG_02907","SJAG_04404","SJAG_04403","SJAG_01162","SJAG_02010","SJAG_02973","SJAG_01734","SJAG_01628","SJAG_03797","SJAG_00668","SJAG_02515","SJAG_01869","SJAG_03653","SJAG_01803","SJAG_03303","SJAG_00179","SJAG_00903","SJAG_00270","SJAG_00614","SJAG_02960","SJAG_01216","SJAG_01612","SJAG_01404","SJAG_05256","SJAG_00365","SJAG_03786"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98914,116457,101661,120046,120480,91926,89888,114144,104686,105438,96496,120621,96769,100828,89791,110557,114867,100177,101014,115321,115359,116558],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990748"},{"annotations":[114589,102684],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110095"},{"annotations":[110268,72591,120071,98824,95118,98862],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0098849"},{"annotations":[115601],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140114"},{"annotations":[120168,101819,110676,97013,106876,119232],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061692"},{"annotations":[104035,89215],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070458"},{"annotations":[108629,66535,64761,57721,69690,70312],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0098869"},{"annotations":[72590],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010273"},{"annotations":[95580,95579],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010312"},{"annotations":[79887,97350],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0046294"},{"annotations":[104616,61740,74579,76209],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019243"},{"annotations":[61490,59690,106879],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061727"},{"annotations":[93630],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043387"},{"annotations":[66246,61623,70430,58471,94949,75953,101086,91218,90794],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019430"},{"annotations":[97381,101823,108438],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110052"},{"annotations":[58854,119815,64811],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990961"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxic stimulus.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":71,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_00179":null,"SJAG_00219":null,"SJAG_00270":null,"SJAG_00365":null,"SJAG_00419":null,"SJAG_00489":null,"SJAG_00614":null,"SJAG_00668":null,"SJAG_00903":null,"SJAG_00988":null,"SJAG_01078":null,"SJAG_01145":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01344":null,"SJAG_01351":null,"SJAG_01404":null,"SJAG_01457":null,"SJAG_01596":null,"SJAG_01612":null,"SJAG_01628":null,"SJAG_01651":null,"SJAG_01734":null,"SJAG_01803":null,"SJAG_01869":null,"SJAG_01973":null,"SJAG_01995":null,"SJAG_02010":null,"SJAG_02106":null,"SJAG_02247":null,"SJAG_02276":null,"SJAG_02515":null,"SJAG_02599":null,"SJAG_02630":null,"SJAG_02907":null,"SJAG_02960":null,"SJAG_02973":null,"SJAG_02988":null,"SJAG_03108":null,"SJAG_03166":null,"SJAG_03288":null,"SJAG_03303":null,"SJAG_03316":null,"SJAG_03363":null,"SJAG_03476":null,"SJAG_03494":null,"SJAG_03497":null,"SJAG_03623":null,"SJAG_03653":null,"SJAG_03786":null,"SJAG_03797":null,"SJAG_03951":null,"SJAG_04063":null,"SJAG_04125":null,"SJAG_04242":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04404":null,"SJAG_04516":null,"SJAG_04608":null,"SJAG_04632":null,"SJAG_04674":null,"SJAG_04726":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05181":null,"SJAG_05256":null,"SJAG_06611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to toxic substance","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"detoxification response","type":"narrow"},{"name":"toxin resistance","type":"related"},{"name":"toxin susceptibility/resistance","type":"related"}],"termid":"GO:0009636","terms_by_termid":{"GO:0010273":null,"GO:0010312":null,"GO:0019243":null,"GO:0019430":null,"GO:0043387":null,"GO:0046294":null,"GO:0061692":null,"GO:0061727":null,"GO:0070458":null,"GO:0098849":null,"GO:0098869":null,"GO:0110052":null,"GO:0110095":null,"GO:0140114":null,"GO:1990748":null,"GO:1990961":null}}


id: GO:1905305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiac myofibril assembly.","definition_xrefs":["GOC:TermGenie","PMID:16151019","GO_REF:0000058","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"is_a","term_name":"negative regulation of organelle assembly","termid":"GO:1902116"},{"relation_name":"is_a","term_name":"negative regulation of supramolecular fiber organization","termid":"GO:1902904"},{"relation_name":"is_a","term_name":"regulation of cardiac myofibril assembly","termid":"GO:1905304"},{"relation_name":"is_a","term_name":"negative regulation of cardiac muscle cell differentiation","termid":"GO:2000726"},{"relation_name":"negatively_regulates","term_name":"cardiac myofibril assembly","termid":"GO:0055003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"negatively_regulates","termid":"GO:0030036"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0007010","GO:0030036","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac myofibril assembly","synonyms":[{"name":"down regulation of cardiac myofibril assembly","type":"exact"},{"name":"down regulation of cardiac myofibril development","type":"exact"},{"name":"down regulation of cardiac myofibril morphogenesis","type":"exact"},{"name":"down regulation of heart myofibril assembly","type":"related"},{"name":"down-regulation of cardiac myofibril assembly","type":"exact"},{"name":"down-regulation of cardiac myofibril development","type":"exact"},{"name":"down-regulation of cardiac myofibril morphogenesis","type":"exact"},{"name":"down-regulation of heart myofibril assembly","type":"related"},{"name":"downregulation of cardiac myofibril assembly","type":"exact"},{"name":"downregulation of cardiac myofibril development","type":"exact"},{"name":"downregulation of cardiac myofibril morphogenesis","type":"exact"},{"name":"downregulation of heart myofibril assembly","type":"related"},{"name":"inhibition of cardiac myofibril assembly","type":"narrow"},{"name":"inhibition of cardiac myofibril development","type":"narrow"},{"name":"inhibition of cardiac myofibril morphogenesis","type":"narrow"},{"name":"inhibition of heart myofibril assembly","type":"related"},{"name":"negative regulation of cardiac myofibril development","type":"exact"},{"name":"negative regulation of cardiac myofibril morphogenesis","type":"exact"},{"name":"negative regulation of heart myofibril assembly","type":"related"}],"termid":"GO:1905305"}


id: PBO:0065204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRP38 domain containing A pseudogene 1","termid":"PBO:0065204"}


id: MONDO:0009483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Kapur-Toriello syndrome is an extremely rare syndrome characterized by facial dysmorphism, severe intellectual deficiency, cardiac and intestinal anomalies, and growth retardation.","definition_xrefs":["Orphanet:2328"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kapur-Toriello syndrome","secondary_identifiers":["MESH:C537008","OMIM:244300","SCTID:722031003","UMLS:C0796005","MEDGEN:208654","GARD:3078"],"synonyms":[{"name":"cleft lip/palate-facial, eye, heart and intestinal anomalies syndrome","type":"exact"},{"name":"kapur Toriello syndrome","type":"related"},{"name":"kapur-Toriello syndrome","type":"exact"},{"name":"long columella with cleft Lip/palate and eye, heart, and intestinal anomalies","type":"related"},{"name":"long columella with cleft lip/palate and eye, heart and intestinal anomalies","type":"related"}],"termid":"MONDO:0009483","xrefs":{"Monarch":{"xref_id":"0009483"}}}


id: PR:O59790
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An aurora kinase B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ark1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC320.13c","secondary_identifiers":["UniProtKB:O59790"],"synonyms":[{"name":"SPCC320.13c","type":"related"},{"name":"Spom972h-AURKB","type":"exact"},{"name":"aurora-related kinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sex1","type":"related"}],"termid":"PR:O59790"}


id: FYPO:0005646
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the kinetochore is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal kinetochore morphology","synonyms":[{"name":"abnormal kinetochore structure","type":"narrow"},{"name":"kinetochore defects","type":"exact"}],"termid":"FYPO:0005646"}


id: PBO:0088947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-Tyr-tRNA deacylase Dtd1","termid":"PBO:0088947"}


id: PBO:0067225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 294, pseudogene","termid":"PBO:0067225"}


id: PBO:0063221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCDH9 antisense RNA 1","termid":"PBO:0063221"}


id: FYPO:0005905
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which contractile ring assembly begins at the normal (i.e. indistinguishable from wild type) time relative to other cell cycle events.","definition_xrefs":["PMID:19570908","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actomyosin contractile ring assembly","termid":"FYPO:0001368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal onset of actomyosin contractile ring assembly","synonyms":[{"name":"normal onset of actomyosin contractile ring assembly during mitotic cell cycle","type":"related"},{"name":"normal onset of actomyosin contractile ring assembly during vegetative growth","type":"exact"},{"name":"normal onset of actomyosin contractile ring formation","type":"related"},{"name":"normal onset of contractile ring assembly","type":"exact"},{"name":"normal onset of cytokinetic contractile ring assembly","type":"exact"},{"name":"normal onset of cytokinetic ring assembly","type":"related"},{"name":"normal onset of cytokinetic ring formation","type":"related"},{"name":"normal onset of mitotic contractile ring assembly","type":"exact"},{"name":"normal timing of actomyosin contractile ring assembly","type":"related"}],"termid":"FYPO:0005905"}


id: PBO:0063834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phytanoyl-CoA dioxygenase domain containing 1","termid":"PBO:0063834"}


id: FYPO:0002277
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of protein degradation is increased when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased protein level during cellular response to nitrogen starvation","termid":"FYPO:0001283"},{"relation_name":"is_a","term_name":"increased protein degradation","termid":"FYPO:0002276"},{"relation_name":"is_a","term_name":"abnormal protein degradation during nitrogen starvation","termid":"FYPO:0002796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased protein degradation during nitrogen starvation","synonyms":[{"name":"increased protein breakdown during nitrogen starvation","type":"exact"},{"name":"increased protein catabolic process during nitrogen starvation","type":"exact"},{"name":"increased protein catabolism during nitrogen starvation","type":"exact"},{"name":"increased protein degradation during nitrogen depletion","type":"exact"},{"name":"increased protein degradation during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0002277"}


id: SO:0000508
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one D-gene, one DJ-gene, and one J-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"D_gene_segment","termid":"SO:0000458"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D_DJ_J_cluster","synonyms":[{"name":"D DJ J cluster","type":"exact"},{"name":"D-(DJ)-J-CLUSTER","type":"exact"}],"termid":"SO:0000508"}


id: PBO:0017643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ketoreductase involved in fatty acid elongation (predicted)","termid":"PBO:0017643"}


id: PBO:0063035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p21 (RAC1) activated kinase 2","termid":"PBO:0063035"}


id: MONDO:0044636
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare hyperkinetic movement disorder (obsolete MONDO:0044636)","secondary_identifiers":["Orphanet:494457"],"termid":"MONDO:0044636","xrefs":{"Monarch":{"xref_id":"0044636"}}}


id: PBO:0001370
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates sdh41","termid":"PBO:0001370"}


id: PBO:0064746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 82","termid":"PBO:0064746"}


id: PBO:0080079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 41","termid":"PBO:0080079"}


id: PBO:0027746
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_regulation_of_sexual_differentiation_gene_mRNA_during_nitrogen_starvation","termid":"PBO:0027746"}


id: MONDO:0000717
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acrofrontofacionasal dysostosis (obsolete MONDO:0000717)","termid":"MONDO:0000717","xrefs":{"Monarch":{"xref_id":"0000717"}}}


id: GO:0009406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete virulence (obsolete GO:0009406)","synonyms":[{"name":"virulence","type":"exact"}],"termid":"GO:0009406"}


id: GO:1901070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of guanosine-containing compounds (guanosines).","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleoside biosynthetic process","termid":"GO:0046129"},{"relation_name":"is_a","term_name":"guanosine-containing compound metabolic process","termid":"GO:1901068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"guanosine-containing compound biosynthetic process","synonyms":[{"name":"guanosine-containing compound anabolism","type":"exact"},{"name":"guanosine-containing compound biosynthesis","type":"exact"},{"name":"guanosine-containing compound formation","type":"exact"},{"name":"guanosine-containing compound synthesis","type":"exact"},{"name":"guanosines anabolism","type":"exact"},{"name":"guanosines biosynthesis","type":"exact"},{"name":"guanosines biosynthetic process","type":"exact"},{"name":"guanosines formation","type":"exact"},{"name":"guanosines synthesis","type":"exact"}],"termid":"GO:1901070"}


id: GO:0140672
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chromatin remodeling complex that regulates transcription via acetylation primarily of nucleosomal histones H3 and possibly H4. Shares the histone acetylation (HAT) module of GCN5/PCAF-ADA2-ADA3-SGF29 (or orthologs) with the related SAGA complex (GO:0000124). Contains HAT subunits GCN5 or PCAF in a mutually exclusive manner. In addition to the HAT module contains DR1/NC2B, KAT14, MBIP, WDR5, YEATS2 and ZZZ3 or orthologs. Also regulates the activity of non-histone targets and orchestrates mitotic progression by regulating Cyclin A degradation through acetylation.","definition_xrefs":["GOC:bhm","PMID:28966424","PMID:19936620","PMID:20562830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SAGA-type complex","termid":"GO:0070461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"ATAC complex","synonyms":[{"name":"ADA2A-containing complex","type":"exact"},{"name":"Ada Two-A containing complex","type":"exact"},{"name":"Ada two A containing complex","type":"exact"},{"name":"Ada-Two-A-containing complex","type":"exact"},{"name":"G-ATAC complex","type":"exact"},{"name":"KAT2A-containing ATAC complex","type":"exact"},{"name":"KAT2B-containing ATAC complex","type":"exact"}],"termid":"GO:0140672"}


id: GO:0098693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the synaptic vesicle cycle.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle-mediated transport","termid":"GO:0060627"},{"relation_name":"regulates","term_name":"synaptic vesicle cycle","termid":"GO:0099504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of synaptic vesicle cycle","termid":"GO:0098693"}


id: PBO:0062618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily X member 1","termid":"PBO:0062618"}


id: PBO:0002402
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.145","termid":"PBO:0002402"}


id: PBO:0061350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 8","termid":"PBO:0061350"}


id: PBO:0119665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"virus inducible lncRNA modulator of interferon response","termid":"PBO:0119665"}


id: PBO:0075425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated antigen 11B","termid":"PBO:0075425"}


id: PBO:0090897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prp19 complex subunit, ubiquitin-protein ligase E4 Prp19","termid":"PBO:0090897"}


id: GO:0047045
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + testosterone = NADPH + H+ + androst-4-ene-3,17-dione.","definition_xrefs":["EC:1.1.1.64"],"direct_ancestors":[{"relation_name":"is_a","term_name":"17-beta-hydroxysteroid dehydrogenase (NADP+) activity","termid":"GO:0072582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"testosterone dehydrogenase (NADP+) activity","secondary_identifiers":["RHEA:14981","KEGG_REACTION:R01838","MetaCyc:1.1.1.64-RXN","Wikipedia:Testosterone_17beta-dehydrogenase_(NADP+)"],"synonyms":[{"name":"17-ketoreductase activity","type":"broad"},{"name":"17beta-hydroxysteroid:NADP+ 17-oxidoreductase activity","type":"related"},{"name":"NADP-dependent testosterone-17beta-oxidoreductase activity","type":"related"},{"name":"testosterone 17-beta-dehydrogenase (NADP+) activity","type":"related"},{"name":"testosterone 17beta-dehydrogenase (NADP+)","type":"related"}],"termid":"GO:0047045"}


id: PBO:0044563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in azoospermia 4","termid":"PBO:0044563"}


id: GO:0002128
data:
  {"annotated_genes":["SJAG_04649","SJAG_01269","SJAG_02352"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116680],"is_not":false,"summary":null,"term":"GO:0002128"},{"annotations":[99661,104712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002130"}]},"cv_name":"biological_process","definition":"The process that results in the modification of the sugar of a nucleoside in tRNA at the 2'O position.","definition_xrefs":["ISBN:155581073X","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methylation","termid":"GO:0030488"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01269":null,"SJAG_02352":null,"SJAG_04649":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006399","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"tRNA nucleoside ribose methylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0002128","terms_by_termid":{"GO:0002128":null,"GO:0002130":null}}


id: PBO:0066805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 104","termid":"PBO:0066805"}


id: PBO:0087714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential protein","termid":"PBO:0087714"}


id: GO:0048783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cyanophore differentiation.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cyanophore differentiation","termid":"GO:0048781"},{"relation_name":"is_a","term_name":"positive regulation of pigment cell differentiation","termid":"GO:0050942"},{"relation_name":"positively_regulates","term_name":"cyanophore differentiation","termid":"GO:0048774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cyanophore differentiation","synonyms":[{"name":"activation of cyanophore differentiation","type":"narrow"},{"name":"stimulation of cyanophore differentiation","type":"narrow"},{"name":"up regulation of cyanophore differentiation","type":"exact"},{"name":"up-regulation of cyanophore differentiation","type":"exact"},{"name":"upregulation of cyanophore differentiation","type":"exact"}],"termid":"GO:0048783"}


id: PBO:0041688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium binding and coiled-coil domain 1","termid":"PBO:0041688"}


id: PBO:0075025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-36","termid":"PBO:0075025"}


id: MONDO:0022871
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corpus callosum agenesis of blepharophimosis robin type","termid":"MONDO:0022871","xrefs":{"Monarch":{"xref_id":"0022871"}}}


id: PBO:0070060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 17, pseudogene","termid":"PBO:0070060"}


id: PBO:0044994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIAPH1 antisense RNA 1","termid":"PBO:0044994"}


id: PBO:0078595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 8, Y-linked","termid":"PBO:0078595"}


id: MONDO:0020135
data:
  {"annotated_genes":["SJAG_00639","SJAG_00754","SJAG_04123","SJAG_01645","SJAG_04067","SJAG_01818","SJAG_04907","SJAG_00653","SJAG_03328","SJAG_04824","SJAG_01260","SJAG_01791","SJAG_00900","SJAG_05277","SJAG_03601","SJAG_04084","SJAG_01970","SJAG_04902","SJAG_04321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014349"},{"annotations":[88098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013853"},{"annotations":[88395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010190"},{"annotations":[88884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012890"},{"annotations":[88888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012891"},{"annotations":[88219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014370"},{"annotations":[87333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009166"},{"annotations":[87109],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012438"},{"annotations":[87098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012683"},{"annotations":[88847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013990"},{"annotations":[88189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014351"},{"annotations":[88044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032643"},{"annotations":[88747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032831"},{"annotations":[88298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030258"},{"annotations":[88299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030259"},{"annotations":[88011,88012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030438"},{"annotations":[88703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014485"},{"annotations":[88182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054844"},{"annotations":[88300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030261"},{"annotations":[87880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014874"}]},"cv_name":"mondo","definition":"Pontocerebellar hypoplasias (PCH) are a rare heterogeneous group of diseases characterized by hypoplasia and atrophy and/or early neurodegeneration of the cerebellum and pons. Eight subtypes named type 1-8 have been described, generally inherited in an autosomal recessive pattern.","definition_xrefs":["Orphanet:98523"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00639":null,"SJAG_00653":null,"SJAG_00754":null,"SJAG_00900":null,"SJAG_01260":null,"SJAG_01645":null,"SJAG_01791":null,"SJAG_01818":null,"SJAG_01970":null,"SJAG_03328":null,"SJAG_03601":null,"SJAG_04067":null,"SJAG_04084":null,"SJAG_04123":null,"SJAG_04321":null,"SJAG_04824":null,"SJAG_04902":null,"SJAG_04907":null,"SJAG_05277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"pontocerebellar hypoplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C580383","MEDGEN:224703","OMIMPS:607596","SCTID:45163000","GARD:10977","icd11.foundation:1565266279","UMLS:C1261175","DOID:0060264","NORD:1596"],"synonyms":[{"name":"PCH","type":"exact"},{"name":"isolated pontocerebellar hypoplasia","type":"narrow"},{"name":"nonsyndromic pontocerebellar hypoplasia","type":"narrow"},{"name":"pontocerebellar hypoplasia","type":"exact"},{"name":"pontoneocerebellar atrophy","type":"exact"},{"name":"pontoneocerebllar hypoplasia","type":"exact"}],"termid":"MONDO:0020135","terms_by_termid":{"MONDO:0009166":null,"MONDO:0010190":null,"MONDO:0012438":null,"MONDO:0012683":null,"MONDO:0012890":null,"MONDO:0012891":null,"MONDO:0013853":null,"MONDO:0013990":null,"MONDO:0014349":null,"MONDO:0014351":null,"MONDO:0014370":null,"MONDO:0014485":null,"MONDO:0014874":null,"MONDO:0030258":null,"MONDO:0030259":null,"MONDO:0030261":null,"MONDO:0030438":null,"MONDO:0032643":null,"MONDO:0032831":null,"MONDO:0054844":null},"xrefs":{"Monarch":{"xref_id":"0020135"}}}


id: GO:0075315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of basidium development, a process that leads to the formation of basidium, a small, specialized club-shaped structure typically bearing four basidiospores at the tips of minute projections. The basidium is unique to basidiomycetes and distinguishes them from other kinds of fungi.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of spore-bearing organ development","termid":"GO:0075261"},{"relation_name":"is_a","term_name":"regulation of basidium development","termid":"GO:0075314"},{"relation_name":"positively_regulates","term_name":"basidium development","termid":"GO:0075313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of basidium development","termid":"GO:0075315"}


id: GO:0070567
data:
  {"annotated_genes":["SJAG_00946","SJAG_04628","SJAG_02288","SJAG_03563","SJAG_00426","SJAG_01704"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76569,72070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052927"},{"annotations":[71605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004105"},{"annotations":[77106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004306"},{"annotations":[81803,121034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004605"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a cytidylyl group to an acceptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00426":null,"SJAG_00946":null,"SJAG_01704":null,"SJAG_02288":null,"SJAG_03563":null,"SJAG_04628":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0016779","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"cytidylyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"PMID:25318672":null},"termid":"GO:0070567","terms_by_termid":{"GO:0004105":null,"GO:0004306":null,"GO:0004605":null,"GO:0008654":null,"GO:0052927":null}}


id: FYPO:0000066
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of L-azetidine-2-carboxylic acid than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002682","FYPO:0005447","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"resistance to L-azetidine-2-carboxylic acid","synonyms":[{"name":"resistance to (S)-azetidine-2-carboxylic acid","type":"exact"},{"name":"resistance to AZC","type":"broad"},{"name":"resistance to L-azetidine-2-carboxylic acid during mitotic cell cycle","type":"related"},{"name":"resistance to L-azetidine-2-carboxylic acid during vegetative growth","type":"exact"},{"name":"resistant to L-azetidine-2-carboxylic acid","type":"exact"}],"termid":"FYPO:0000066"}


id: GO:1904262
data:
  {"annotated_genes":["SJAG_03072","SJAG_00875","SJAG_04249","SJAG_00209","SJAG_01184","SJAG_05346","SJAG_03678","SJAG_03799","SJAG_04910","SJAG_00457","SJAG_03486","SJAG_01142","SJAG_02389","SJAG_00991","SJAG_03355","SJAG_00169","SJAG_02231","SJAG_03974","SJAG_03501","SJAG_02765","SJAG_01983","SJAG_00824","SJAG_03089"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62916,75289,75396,81668,89836,95140,97915,100690,101387,103274,104833,106961,108982,111112,111519,115015,115833,116435,117988,118343,118906,119905,120098],"is_not":false,"summary":null,"term":"GO:1904262"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of TORC1 signaling.","definition_xrefs":["GOC:TermGenie","PMID:25366275","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of TOR signaling","termid":"GO:0032007"},{"relation_name":"is_a","term_name":"regulation of TORC1 signaling","termid":"GO:1903432"},{"relation_name":"negatively_regulates","term_name":"TORC1 signaling","termid":"GO:0038202"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00209":null,"SJAG_00457":null,"SJAG_00824":null,"SJAG_00875":null,"SJAG_00991":null,"SJAG_01142":null,"SJAG_01184":null,"SJAG_01983":null,"SJAG_02231":null,"SJAG_02389":null,"SJAG_02765":null,"SJAG_03072":null,"SJAG_03089":null,"SJAG_03355":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03678":null,"SJAG_03799":null,"SJAG_03974":null,"SJAG_04249":null,"SJAG_04910":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of TORC1 signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"down regulation of TORC1 signal transduction","type":"exact"},{"name":"down regulation of TORC1 signaling","type":"exact"},{"name":"down-regulation of TORC1 signal transduction","type":"exact"},{"name":"down-regulation of TORC1 signaling","type":"exact"},{"name":"downregulation of TORC1 signal transduction","type":"exact"},{"name":"downregulation of TORC1 signaling","type":"exact"},{"name":"inhibition of TORC1 signal transduction","type":"narrow"},{"name":"inhibition of TORC1 signaling","type":"narrow"},{"name":"negative regulation of TORC1 signal transduction","type":"exact"}],"termid":"GO:1904262","terms_by_termid":{"GO:1904262":null}}


id: PBO:0075413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm acrosome associated 9","termid":"PBO:0075413"}


id: PBO:0047110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 157 member C","termid":"PBO:0047110"}


id: FYPO:0003214
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to glucose starvation","synonyms":[{"name":"normal protein phosphorylation during cellular response to glucose depletion","type":"exact"},{"name":"normal protein phosphorylation during cellular response to glucose deprivation","type":"exact"},{"name":"normal protein phosphorylation during cellular response to glucose limitation","type":"related"},{"name":"normal protein phosphorylation during cellular response to glucose starvation during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to glucose starvation during vegetative growth","type":"exact"},{"name":"normal protein phosphorylation during glucose starvation","type":"exact"}],"termid":"FYPO:0003214"}


id: FYPO:0002552
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer lipid droplets than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"lipid droplets present in decreased numbers","synonyms":[{"name":"decreased level of lipid droplets","type":"related"},{"name":"fewer lipid droplets present during vegetative growth","type":"exact"},{"name":"lipid droplets present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"lipid droplets present in decreased numbers during vegetative growth","type":"exact"},{"name":"lipid droplets present in reduced numbers","type":"exact"},{"name":"lipid particles present in decreased numbers","type":"exact"}],"termid":"FYPO:0002552"}


id: PBO:0086741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; phosphorylated by Dbf2p-Mob1p in vitro; some strains contain microsatellite polymophisms at this locus; not an essential gene; YLR177W has a paralog, PSP1, that arose from the whole genome duplication","termid":"PBO:0086741"}


id: PBO:0000490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GAT domain","termid":"PBO:0000490"}


id: PBO:0028032
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_chromosome_fragmentation_upon_segregation","termid":"PBO:0028032"}


id: GO:0005775
data:
  {"annotated_genes":["SJAG_03976","SJAG_00181","SJAG_03022","SJAG_02100","SJAG_00132","SJAG_04785","SJAG_01868","SJAG_03586","SJAG_03608","SJAG_02432","SJAG_01407","SJAG_01088"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99653,115160,107580,116030,116304,117710,70295,99444,72579,103480,89282,95727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000328"}]},"cv_name":"cellular_component","definition":"The volume enclosed within the vacuolar membrane.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"vacuole","termid":"GO:0005773"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00132":null,"SJAG_00181":null,"SJAG_01088":null,"SJAG_01407":null,"SJAG_01868":null,"SJAG_02100":null,"SJAG_02432":null,"SJAG_03022":null,"SJAG_03586":null,"SJAG_03608":null,"SJAG_03976":null,"SJAG_04785":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005773","GO:0005737"],"is_obsolete":false,"name":"vacuolar lumen","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0005775","terms_by_termid":{"GO:0000328":null}}


id: PBO:0088933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIS12/MIND complex Mis14/Nsl1","termid":"PBO:0088933"}


id: PBO:0088416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex subunit 11","termid":"PBO:0088416"}


id: GO:1990428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of microRNA (miRNA) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:24356509","GO:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA transport","termid":"GO:0050658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"miRNA transport","synonyms":[{"name":"microRNA transport","type":"exact"}],"termid":"GO:1990428"}


id: MONDO:0017978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndrome with disorder of sex development of gynecological interest (obsolete MONDO:0017978)","secondary_identifiers":["Orphanet:325638"],"synonyms":[{"name":"syndrome with DSD of gynecological interest","type":"exact"}],"termid":"MONDO:0017978","xrefs":{"Monarch":{"xref_id":"0017978"}}}


id: PBO:0084004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycerophosphocholine acyltransferase (GPCAT); involved in in phosphatidylcholine (PC) synthesis; uses acyl-CoA to acylate glycero-3-phosphocholine to yield lyso-PC; also catalyzes acylation of glycerophosphoethanolamine with acyl-CoA; predicted to be an integral membrane protein","termid":"PBO:0084004"}


id: MONDO:0005272
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A myelodysplastic syndrome characterized by dysplasia seen in at least 10% of the early cells of 1 cell type (either red blood cells, white blood cells, or megakaryocytes) in the bone marrow.","definition_xrefs":["doi:10.5772/intechopen.82532"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"myelodysplastic syndrome with multilineage dysplasia","termid":"MONDO:0019453"},{"relation_name":"is_a","term_name":"myelodysplastic syndrome","termid":"MONDO:0018881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"myelodysplastic syndrome with single lineage dysplasia","secondary_identifiers":["EFO:0003802","ICD9:238.72","icd11.foundation:149518956","Orphanet:98826","GARD:19585","NCIT:C2872","MESH:D000753","MEDGEN:415300","SCTID:109996008","UMLS:C2826318","NCIT:C82591","ICDO:9980/3","MedDRA:10038269","SCTID:1153345005"],"synonyms":[{"name":"MDS with single lineage dysplasia","type":"exact"},{"name":"MDS-SLD","type":"exact"},{"name":"RA","type":"exact"},{"name":"aregenerative anaemia","type":"related"},{"name":"aregenerative anemia","type":"related"},{"name":"refractory anaemia","type":"exact"},{"name":"refractory anemia","type":"exact"}],"termid":"MONDO:0005272","xrefs":{"Monarch":{"xref_id":"0005272"}}}


id: PBO:0072813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha motif domain containing 9","termid":"PBO:0072813"}


id: PBO:0001729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain Dlc1","termid":"PBO:0001729"}


id: PBO:0057830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3148","termid":"PBO:0057830"}


id: FYPO:0000051
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiosis is abnormal. Meiosis refers specifically to the nuclear division phases of a meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"},{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle process","termid":"FYPO:0002739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abnormal meiosis","secondary_identifiers":["FYPO:0000738"],"synonyms":[{"name":"abnormal meiotic nuclear division","type":"exact"},{"name":"meiosis defects","type":"exact"},{"name":"meiosis: abnormal","type":"related"}],"termid":"FYPO:0000051"}


id: GO:2001131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a methane from a dimethyl sulfide.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"methanogenesis","termid":"GO:0015948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"methane biosynthetic process from dimethyl sulfide","termid":"GO:2001131"}


id: PBO:0051331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-26 (pseudogene)","termid":"PBO:0051331"}


id: MONDO:0015782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dysmorphism-cleft palate-loose skin syndrome is a rare, genetic developmental defect during embryogenesis characterized by severe psychomotor delay, intellectual disability, congential, symmetrical circumferential skin creases of arms and legs, cleft palate, and facial dysmorphism (incl. elongated face, high forehead, blepharophimosis, short palpebral fissures, microphthalmia, microcornea, epicanthic folds, telecanthus, microtia, posteriorly angulated ears, broad nasal bridge, microstomia and micrognathia). Additional features reported include short stature, microcephaly, hypotonia, pectus excavatum, severe scoliosis, hypoplastic scrotum, and mixed hearing loss.","definition_xrefs":["Orphanet:1779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysmorphism-cleft palate-loose skin syndrome","secondary_identifiers":["MEDGEN:1642311","GARD:2009","UMLS:C4706366"],"termid":"MONDO:0015782","xrefs":{"Monarch":{"xref_id":"0015782"}}}


id: PBO:0024803
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_causal_agent","termid":"PBO:0024803"}


id: PBO:0070896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 4","termid":"PBO:0070896"}


id: MOD:00605
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative, C-Terminal/Glutamate/Aspartate sulfonation","definition_xrefs":["Unimod:285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sulfanilic Acid (SA), light C12","synonyms":[{"name":"Light Sulfanilic Acid (SA) C12","type":"related"},{"name":"SulfanilicAcid","type":"related"}],"termid":"MOD:00605"}


id: PBO:0052873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 6-2","termid":"PBO:0052873"}


id: GO:0035791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a ligand to a beta-type platelet-derived growth factor receptor (PDGFbeta) on the surface of a signal-receiving cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:bf","GOC:yaf","PMID:10372961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"platelet-derived growth factor receptor signaling pathway","termid":"GO:0048008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"platelet-derived growth factor receptor-beta signaling pathway","synonyms":[{"name":"PDGF receptor-beta signaling pathway","type":"exact"},{"name":"PDGFR-beta signaling pathway","type":"exact"},{"name":"betaPDGF receptor signaling pathway","type":"exact"},{"name":"platelet-derived growth factor receptor-beta signalling pathway","type":"exact"}],"termid":"GO:0035791"}


id: GO:0120526
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an L-polyhomomethionine + 2 O2 + 2 reduced [NADPH--hemoprotein reductase] = an (E)-omega-(methylsulfanyl)-alkanal oxime + CO2 + 2 H(+) + 3 H2O + 2 oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:51972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"homomethionine N-monooxygenase activity","secondary_identifiers":["EC:1.14.14.42","KEGG_REACTION:R11646","MetaCyc:RXN-18175"],"termid":"GO:0120526"}


id: PBO:0072369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 55","termid":"PBO:0072369"}


id: PBO:0012050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Las1 pre-rRNA processing protein","termid":"PBO:0012050"}


id: PBO:0077812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p53 binding protein 2 pseudogene 1","termid":"PBO:0077812"}


id: MONDO:1011947
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscle contracture and chondrodysplasia, non-human animal","secondary_identifiers":["OMIA:000675"],"termid":"MONDO:1011947","xrefs":{"Monarch":{"xref_id":"1011947"}}}


id: GO:0090656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A telomere maintenance process that results in the formation of a telomeric circle, or t-circle. A t-circle is an extrachromosomal duplex or single-stranded circular DNA molecule composed of t-arrays. T-circles are involved in the control of telomere length via alternative-lengthening of telomeres (ALT) pathway and telomere rapid deletion (TRD).","definition_xrefs":["GOC:nc","PMID:19809492","GOC:BHF","PMID:19214183","PMID:19858100","GOC:BHF_telomere","PMID:19581589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of extrachromosomal circular DNA","termid":"GO:0001325"},{"relation_name":"part_of","term_name":"telomere maintenance via telomere trimming","termid":"GO:0090737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0008150","GO:0032200","GO:0006259","GO:0044085"],"is_obsolete":false,"name":"t-circle formation","synonyms":[{"name":"telomeric circle formation","type":"exact"}],"termid":"GO:0090656"}


id: PBO:0004260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein Pof10","termid":"PBO:0004260"}


id: MONDO:0007597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"factor VIII and Factor IX, combined deficiency of","secondary_identifiers":["MESH:C565024","UMLS:C1851376","MEDGEN:341994","OMIM:134510"],"synonyms":[{"name":"F8F9D","type":"related"},{"name":"factor 8 and Factor IX, combined deficiency of","type":"related"},{"name":"factor VIII and Factor IX, combined deficiency of","type":"exact"},{"name":"factor VIII and factor IX, combined deficiency OF","type":"related"},{"name":"familial multiple coagulation Factor deficiency 2","type":"related"}],"termid":"MONDO:0007597","xrefs":{"Monarch":{"xref_id":"0007597"}}}


id: GO:0008116
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: prostaglandin H(2) = prostaglandin I(2).","definition_xrefs":["RHEA:23580","EC:5.3.99.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"prostaglandin-I synthase activity","secondary_identifiers":["KEGG_REACTION:R02267","Reactome:R-HSA-76496","MetaCyc:PROSTAGLANDIN-I-SYNTHASE-RXN"],"synonyms":[{"name":"(5Z,13E)-(15S)-9alpha,11alpha-epidioxy-15-hydroxyprosta-5,13-dienoate 6-isomerase activity","type":"related"},{"name":"PGI(2) synthase activity","type":"related"},{"name":"PGI(2) synthetase activity","type":"related"},{"name":"PGI2 synthase activity","type":"related"},{"name":"PGI2 synthetase activity","type":"related"},{"name":"cytochrome P450 CYP8A1","type":"narrow"},{"name":"prostacyclin synthase activity","type":"related"},{"name":"prostacycline synthetase activity","type":"related"},{"name":"prostagladin I2 synthetase activity","type":"related"}],"termid":"GO:0008116"}


id: GO:1902077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lateral motor column neuron migration.","definition_xrefs":["GOC:TermGenie","PMID:20711475","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lateral motor column neuron migration","termid":"GO:1902076"},{"relation_name":"is_a","term_name":"negative regulation of motor neuron migration","termid":"GO:1905484"},{"relation_name":"negatively_regulates","term_name":"lateral motor column neuron migration","termid":"GO:0097477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lateral motor column neuron migration","synonyms":[{"name":"down regulation of lateral motor column neuron migration","type":"exact"},{"name":"down-regulation of lateral motor column neuron migration","type":"exact"},{"name":"downregulation of lateral motor column neuron migration","type":"exact"},{"name":"inhibition of lateral motor column neuron migration","type":"narrow"}],"termid":"GO:1902077"}


id: PBO:0089318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein Wdr20","termid":"PBO:0089318"}


id: MONDO:0008963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"ChC)diak-Higashi syndrome (CHS) is a rare severe genetic disorder generally characterized by partial oculocutaneous albinism (OCA), severe immunodeficiency, mild bleeding, neurological dysfunction and lymphoproliferative disorder. A classic, early-onset form and an attenuated, later-onset form (Atypical CHS) have been described.","definition_xrefs":["Orphanet:167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"constitutional neutropenia","termid":"MONDO:0015134"},{"relation_name":"is_a","term_name":"hereditary hemophagocytic lymphohistiocytosis","termid":"MONDO:0015541"},{"relation_name":"is_a","term_name":"syndromic oculocutaneous albinism","termid":"MONDO:0017305"},{"relation_name":"is_a","term_name":"disorder of lysosomal-related organelles","termid":"MONDO:0017739"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005093","MONDO:0005570","MONDO:0005559","MONDO:0005046","MONDO:0005244","MONDO:0005066"],"is_obsolete":false,"name":"Chediak-Higashi syndrome","secondary_identifiers":["NCIT:C2941","NORD:921","OMIM:214500","NANDO:1200639","DOID:2935","GARD:6035","MedDRA:10008415","ICD10CM:E70.3","ICD10CM:E70.330","UMLS:C0007965","MEDGEN:3347","SCTID:111396008","MESH:D002609","NANDO:1200350","NANDO:2200724"],"synonyms":[{"name":"CHS","type":"exact"},{"name":"ChC)diak-Higashi disease","type":"exact"},{"name":"ChC)diak-Higashi-Steinbrink syndrome","type":"exact"},{"name":"Chediak - Steinbrinck anomaly","type":"exact"},{"name":"Chediak Higashi Syndrome","type":"exact"},{"name":"Chediak Higashi syndrome","type":"exact"},{"name":"Chediak-Higashi syndrome","type":"exact"},{"name":"Chédiak-Higashi disease","type":"exact"},{"name":"Chédiak-Higashi syndrome","type":"exact"},{"name":"Chédiak-Higashi-Steinbrink syndrome","type":"exact"}],"termid":"MONDO:0008963","xrefs":{"Monarch":{"xref_id":"0008963"}}}


id: PBO:0053078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lebercilin LCA5","termid":"PBO:0053078"}


id: FYPO:0000183
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which the export of polyadenylated mRNA from the nucleus is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mRNA export from nucleus","termid":"FYPO:0000204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"abnormal poly(A)+ mRNA export from nucleus","synonyms":[{"name":"abnormal poly(A)+ mRNA export from nucleus during mitotic cell cycle","type":"related"},{"name":"abnormal poly(A)+ mRNA export from nucleus during vegetative growth","type":"exact"},{"name":"abnormal polyadenylated mRNA export from nucleus","type":"exact"}],"termid":"FYPO:0000183"}


id: MONDO:0013000
data:
  {"annotated_genes":["SJAG_01372"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87244],"is_not":false,"summary":null,"term":"MONDO:0013000"}]},"cv_name":"mondo","definition":"An extremely rare form of acute hepatic porphyria characterized by neuro-visceral attacks without cutaneous manifestations.","direct_ancestors":[{"relation_name":"is_a","term_name":"hepatic porphyria","termid":"MONDO:0002520"},{"relation_name":"is_a","term_name":"inherited porphyria","termid":"MONDO:0019142"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01372":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0019142"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002515","MONDO:0019142","MONDO:0005093","MONDO:0004335"],"is_obsolete":false,"name":"porphyria due to ALA dehydratase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0268328","NORD:747","OMIM:612740","GARD:16937","MESH:C562618","Orphanet:100924","NCIT:C133887","MEDGEN:78659"],"synonyms":[{"name":"5-aminolevulinic acid dehydratase deficiency porphyria","type":"related"},{"name":"ALA dehydratase deficiency pophyria","type":"related"},{"name":"ALAD Porphyria","type":"exact"},{"name":"ALAD deficiency","type":"related"},{"name":"ALAD porphyria","type":"exact"},{"name":"ALAD-related porphyria","type":"exact"},{"name":"Delta-aminolevulinate dehydratase deficiency","type":"related"},{"name":"Doss porphyria","type":"related"},{"name":"Lead poisoning, susceptibility to","type":"related"},{"name":"acute hepatic porphyria","type":"exact"},{"name":"aminolevulinate dehydratase deficiency porphyria","type":"related"},{"name":"porphobilinogen synthase deficiency","type":"related"},{"name":"porphyria due to ALAD deficiency","type":"exact"},{"name":"porphyria due to delta-aminolevulinate dehydratase deficiency","type":"exact"},{"name":"porphyria of Doss","type":"exact"},{"name":"porphyria, ALAD","type":"related"},{"name":"porphyria, acute hepatic","type":"related"}],"termid":"MONDO:0013000","terms_by_termid":{"MONDO:0013000":null},"xrefs":{"Monarch":{"xref_id":"0013000"}}}


id: FYPO:0002076
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell is elongated, has a nucleus that is broken into multiple small fragments, forms a septum that is thicker than normal, and is inviable.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"increased septum thickness","termid":"FYPO:0001406"},{"relation_name":"has_part","term_name":"fragmented nucleus during vegetative growth","termid":"FYPO:0001919"},{"relation_name":"is_a","term_name":"increased septum thickness","termid":"FYPO:0001406"},{"relation_name":"is_a","term_name":"inviable elongated vegetative cell with abnormal septum","termid":"FYPO:0002889"},{"relation_name":"is_a","term_name":"inviable elongated vegetative cell with fragmented nucleus","termid":"FYPO:0004672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"has_part","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000004","FYPO:0005447","FYPO:0001320","FYPO:0000032","FYPO:0000005","FYPO:0000002","FYPO:0000631","FYPO:0002403"],"is_obsolete":false,"name":"inviable elongated cell with fragmented nucleus and increased septum thickness","synonyms":[{"name":"elongated inviable cell with fragmented nuclear material and increased septum thickness","type":"exact"},{"name":"elongated inviable cell with fragmented nuclei and increased septum thickness","type":"exact"},{"name":"elongated inviable cell with fragmented nucleus and increased septum thickness","type":"exact"},{"name":"elongated inviable cell with fragmented nucleus and increased septum thickness during vegetative growth","type":"exact"},{"name":"inviable elongated cell with fragmented nuclear DNA and increased septum thickness","type":"related"},{"name":"inviable elongated cell with fragmented nucleus and increased septum thickness during mitotic cell cycle","type":"related"},{"name":"lethal; elongated cell with fragmented nucleus and increased septum thickness","type":"exact"},{"name":"long inviable cell with fragmented nucleus and increased septum thickness","type":"exact"}],"termid":"FYPO:0002076"}


id: GO:0019809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to spermidine, N-(3-aminopropyl)-1,4-diaminobutane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine binding","termid":"GO:0019808"},{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"spermidine binding","termid":"GO:0019809"}


id: PBO:0052962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kynureninase pseudogene 2","termid":"PBO:0052962"}


id: PBO:0078014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 4","termid":"PBO:0078014"}


id: PBO:0049141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamic--pyruvic transaminase 2","termid":"PBO:0049141"}


id: FYPO:0007143
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 5'-deoxyribonuclease (pyrimidine dimer) activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal 5' deoxyribonuclease (pyrimidine dimer) activity","termid":"FYPO:0004028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"increased 5'-deoxyribonuclease (pyrimidine dimer) activity","termid":"FYPO:0007143"}


id: MONDO:0013258
data:
  {"annotated_genes":["SJAG_04616"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89131],"is_not":false,"summary":null,"term":"MONDO:0013258"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autism, susceptiblity to","termid":"MONDO:0020836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04616":null},"genotype_count":0,"is_obsolete":false,"name":"autism, susceptibility to, 16","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3150677","MEDGEN:462027","OMIM:613410"],"synonyms":[{"name":"AUTS16","type":"related"},{"name":"autism susceptibility 16","type":"exact"},{"name":"autism with or without seizures","type":"related"},{"name":"autism, susceptibility to, 16","type":"exact"},{"name":"autism, susceptibility to, type 16","type":"exact"},{"name":"susceptibility to autism 16","type":"related"}],"termid":"MONDO:0013258","terms_by_termid":{"MONDO:0013258":null},"xrefs":{"Monarch":{"xref_id":"0013258"}}}


id: PBO:0047673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"filaggrin 2","termid":"PBO:0047673"}


id: GO:2001218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of S/G2 transition of mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of S/G2 transition of mitotic cell cycle (obsolete GO:2001218)","synonyms":[{"name":"negative regulation of S/G2 transition of mitotic cell cycle","type":"exact"}],"termid":"GO:2001218"}


id: GO:0031462
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ubiquitin ligase complex in which a cullin from the Cul2 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by an elongin-BC adaptor and a SOCS/BC box protein.","definition_xrefs":["PMID:15571813","PMID:15688063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cullin-RING ubiquitin ligase complex","termid":"GO:0031461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Cul2-RING ubiquitin ligase complex","synonyms":[{"name":"CBC complex","type":"broad"},{"name":"CDL2 complex","type":"exact"},{"name":"CRL2 complex","type":"exact"},{"name":"EC2S complex","type":"broad"},{"name":"ECS complex","type":"broad"},{"name":"SCF2 complex","type":"related"},{"name":"VBC complex","type":"narrow"},{"name":"cullin-RING ligase 2","type":"exact"}],"termid":"GO:0031462"}


id: PBO:0079672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 V2 pseudogene 2","termid":"PBO:0079672"}


id: PBO:0111782
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-DHHC type","termid":"PBO:0111782"}


id: GO:0033779
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5beta-cholestane-3alpha,7alpha-diol + H+ + NADPH + O2 = 5beta-cholestane-3alpha,7alpha,12alpha-triol + H2O + NADP+.","definition_xrefs":["GOC:curator"],"gene_count":0,"genotype_count":0,"name":"obsolete 5-beta-cholestane-3-alpha,7-alpha-diol 12-alpha-hydroxylase activity (obsolete GO:0033779)","termid":"GO:0033779"}


id: _global:exemplar_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X is exemplar of Y if X is the best evidence for Y.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exemplar_of","termid":"_global:exemplar_of"}


id: MONDO:0019840
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acro-pectoro-renal field defect is a very rare association of a Poland anomaly, that is characterized by unilateral absence or hypoplasia of the pectoralis major muscle (most frequently involving the sternocostal head) and a variable degree of ipsilateral hand anomalies (including symbrachydactyly, brachydactyly, absent thumb and hypoplastic fingers), combined with a genito-urinary anomaly. Associated genito-urinary anomalies reported include renal hypoplasia or agenesis, duplex collecting system, ureteropelvic junction obstruction, hypospadias and undescended testicles.","definition_xrefs":["Orphanet:956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic breast hypoplasia/aplasia","termid":"MONDO:0015856"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acropectororenal dysplasia","secondary_identifiers":["GARD:511","SCTID:720413004"],"synonyms":[{"name":"acro-pectoro-renal field defect","type":"related"},{"name":"brachydactyly, absent pectoral muscles and agenesis/hypoplasia of kidneys","type":"related"}],"termid":"MONDO:0019840","xrefs":{"Monarch":{"xref_id":"0019840"}}}


id: GO:0097427
data:
  {"annotated_genes":["SJAG_01196","SJAG_03540","SJAG_02624","SJAG_03264","SJAG_02761","SJAG_03073","SJAG_02737","SJAG_04841"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905720"},{"annotations":[102193,118804,99089,115902,70171,66724,103253,114622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099070"}]},"cv_name":"cellular_component","definition":"An arrangement of closely apposed microtubules running parallel to each other.","definition_xrefs":["NIF_Subcellular:sao1872343973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01196":null,"SJAG_02624":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_03073":null,"SJAG_03264":null,"SJAG_03540":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"microtubule bundle","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"microtubule fascicle","type":"exact"}],"termid":"GO:0097427","terms_by_termid":{"GO:0099070":null,"GO:1905720":null}}


id: MONDO:0013241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinocerebellar ataxia type 30 (SCA30) is a very rare subtype of autosomal dominant cerebellar ataxia type III (ADCA type III) characterized by a slowly progressive and relatively pure ataxia.","definition_xrefs":["Orphanet:211017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type III","termid":"MONDO:0019793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"spinocerebellar ataxia type 30","secondary_identifiers":["MEDGEN:424821","OMIM:613371","GARD:4950","MESH:C537206","DOID:0050979","UMLS:C2936793","icd11.foundation:716324960","SCTID:719253007","MESH:C575214"],"synonyms":[{"name":"SCA30","type":"exact"},{"name":"spinocerebellar ataxia 30","type":"related"},{"name":"spinocerebellar ataxia type 30","type":"exact"}],"termid":"MONDO:0013241","xrefs":{"Monarch":{"xref_id":"0013241"}}}


id: PBO:0113260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal matrix protein that regulates lysine biosynthesis; localization to peroxisomes upon lysine deprivation is dependent on targeting factor Pex5p and lysine biosynthesis enzyme Lys1p; affects abundance of Lys1p and the lysine biosynthesis pathway","termid":"PBO:0113260"}


id: MONDO:0024613
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The depressive stage of bipolar disorder.","definition_xrefs":["NCIT:C34424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"depressive disorder","termid":"MONDO:0002050"},{"relation_name":"is_a","term_name":"bipolar disorder","termid":"MONDO:0004985"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bipolar depression","secondary_identifiers":["UMLS:C0005587","MEDGEN:585","SCTID:191627008"],"synonyms":[{"name":"bipolar affective disorder, current episode depression","type":"exact"},{"name":"bipolar depression","type":"exact"},{"name":"manic-depressive - now depressed","type":"related"}],"termid":"MONDO:0024613","xrefs":{"Monarch":{"xref_id":"0024613"}}}


id: MONDO:1012023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"distal axonopathy, non-human animal","termid":"MONDO:1011831"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal axonopathy, domestic cat","secondary_identifiers":["OMIA:000098-9685"],"termid":"MONDO:1012023","xrefs":{"Monarch":{"xref_id":"1012023"}}}


id: PBO:0015236
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CwP1 Partner","termid":"PBO:0015236"}


id: GO:0005998
data:
  {"annotated_genes":["SJAG_04276"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[120905],"is_not":false,"summary":null,"term":"GO:0005998"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of xylulose, the ketopentose threo-2-pentulose.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylulose metabolic process","termid":"GO:0005997"},{"relation_name":"is_a","term_name":"pentose catabolic process","termid":"GO:0019323"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04276":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"xylulose catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:XYLCAT-PWY"],"synonyms":[{"name":"xylulose breakdown","type":"exact"},{"name":"xylulose catabolism","type":"exact"},{"name":"xylulose degradation","type":"exact"}],"termid":"GO:0005998","terms_by_termid":{"GO:0005998":null}}


id: MONDO:1011740
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary seborrhea-oleosa, non-human animal","secondary_identifiers":["OMIA:000822"],"termid":"MONDO:1011740","xrefs":{"Monarch":{"xref_id":"1011740"}}}


id: MONDO:0021096
data:
  {"annotated_genes":["SJAG_01144"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0003789"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial neoplasm","termid":"MONDO:0005626"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01144":null},"genotype_count":0,"is_obsolete":false,"name":"papillary epithelial neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:235456","UMLS:C1335324","NCIT:C8429"],"synonyms":[{"name":"papillary epithelial neoplasm","type":"exact"}],"termid":"MONDO:0021096","terms_by_termid":{"MONDO:0003789":null},"xrefs":{"Monarch":{"xref_id":"0021096"}}}


id: PBO:0077290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 31","termid":"PBO:0077290"}


id: PBO:0074643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 35B","termid":"PBO:0074643"}


id: MONDO:0025598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An pneumonia caused by infection with Chlamydia.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlamydia trachomatis infectious disease","termid":"MONDO:0005701"},{"relation_name":"is_a","term_name":"pneumonia caused by gram negative bacteria","termid":"MONDO:0041850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pneumonia caused by chlamydia","secondary_identifiers":["UMLS:C0339959","ICD9:483.1","MEDGEN:452440","DOID:0040083","MESH:D061387","ICD10CM:J16.0","SCTID:233609002"],"synonyms":[{"name":"Chlamydia caused pneumonia","type":"exact"},{"name":"Chlamydia pneumonia","type":"exact"},{"name":"chlamydia pneumonia","type":"exact"},{"name":"chlamydial pneumonia","type":"exact"}],"termid":"MONDO:0025598","xrefs":{"Monarch":{"xref_id":"0025598"}}}


id: PBO:0054402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1798","termid":"PBO:0054402"}


id: FYPO:0007266
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the endoplasmic reticulum (ER) colocalizes with eisosomes to a lower extent than normal.","definition_xrefs":["PMID:32023460","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cortical endoplasmic reticulum organization","termid":"FYPO:0007571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased colocalization of cortical endoplasmic reticulum with eisosomes","synonyms":[{"name":"decreased colocalization of cortical ER with eisosomes","type":"exact"},{"name":"decreased colocalization of cortical endoplasmic reticulum with eisosomes during mitotic cell cycle","type":"related"},{"name":"decreased colocalization of cortical endoplasmic reticulum with eisosomes during vegetative growth","type":"exact"},{"name":"decreased colocalization of tubular cortical ER with eisosomes","type":"exact"},{"name":"decreased cortical ER-eisosome colocalization","type":"exact"},{"name":"reduced colocalization of cortical endoplasmic reticulum with eisosomes","type":"exact"}],"termid":"FYPO:0007266"}


id: RO:0002257
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Inverse of developmentally induced by","direct_ancestors":[{"relation_name":"is_a","term_name":"developmentally_succeeded_by","termid":"RO:0002286"},{"relation_name":"is_a","term_name":"has_potential_to_developmentally_induce","termid":"RO:0002386"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmentally_induces","termid":"RO:0002257"}


id: PBO:0044539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DAN domain BMP antagonist family member 5","termid":"PBO:0044539"}


id: PBO:0034593
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_chromatin_at_boundary_element_IRC1L","termid":"PBO:0034593"}


id: MONDO:0020226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chromosomal anomaly with cataract (obsolete MONDO:0020226)","secondary_identifiers":["Orphanet:98642"],"termid":"MONDO:0020226","xrefs":{"Monarch":{"xref_id":"0020226"}}}


id: PBO:0031391
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_ethanolamine","termid":"PBO:0031391"}


id: PBO:0073066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndecan 4","termid":"PBO:0073066"}


id: MONDO:0013158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive muscular dystrophy caused by mutations in the LARGE gene. It is associated with characteristic brain and eye malformations, profound mental retardation, and death usually in the first years of life.","definition_xrefs":["NCIT:C126743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy, type A","termid":"MONDO:0000171"},{"relation_name":"is_a","term_name":"muscle-eye-brain disease","termid":"MONDO:0018939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A6","secondary_identifiers":["UMLS:C3150414","GARD:15626","MEDGEN:461764","DOID:0111242","OMIM:613154"],"synonyms":[{"name":"MDDGA6","type":"related"},{"name":"Walker-Warburg syndrome or muscle-eye-brain disease, large-related","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies) type A, 6","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 6","type":"related"}],"termid":"MONDO:0013158","xrefs":{"Monarch":{"xref_id":"0013158"}}}


id: PBO:0077887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPRG1 antisense RNA 1","termid":"PBO:0077887"}


id: PBO:0065206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 38B","termid":"PBO:0065206"}


id: GO:0046068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cyclic GMP, guanosine 3',5'-phosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"cyclic purine nucleotide metabolic process","termid":"GO:0052652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"cGMP metabolic process","synonyms":[{"name":"cGMP metabolism","type":"exact"}],"termid":"GO:0046068"}


id: PR:O94566
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug184 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94566"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 184 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.09c","synonyms":[{"name":"Spom972h-mug184","type":"exact"}],"termid":"PR:O94566"}


id: PBO:0081865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 804A","termid":"PBO:0081865"}


id: GO:0035175
data:
  {"annotated_genes":["SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[118545],"is_not":false,"summary":null,"term":"GO:0035175"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3-serine (position 10) + ATP = histone H3-phosphoserine (position 10) + ADP. This reaction is the addition of a phosphate group to the serine residue at position 10 of histone H3.","definition_xrefs":["PMID:15041176","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"histone H3 kinase activity","termid":"GO:0140996"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01837":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140096","GO:0016301","GO:0003824","GO:0016740","GO:0003674","GO:0004672"],"is_obsolete":false,"name":"histone H3S10 kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0044021"],"synonyms":[{"name":"histone kinase activity (H3-S10 specific)","type":"exact"},{"name":"histone serine kinase activity (H3-S10 specific)","type":"exact"},{"name":"histone-serine kinase activity (H3-S10 specific)","type":"exact"}],"termid":"GO:0035175","terms_by_termid":{"GO:0035175":null}}


id: MONDO:1010972
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dysautonomia that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysautonomia, non-human animal","termid":"MONDO:1010229"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysautonomia, rabbit","secondary_identifiers":["OMIA:000312-9986"],"termid":"MONDO:1010972","xrefs":{"Monarch":{"xref_id":"1010972"}}}


id: GO:0008865
data:
  {"annotated_genes":["SJAG_04334","SJAG_04495"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71955,77837],"is_not":false,"summary":null,"term":"GO:0008865"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + D-fructose = ADP + D-fructose 6-phosphate.","definition_xrefs":["EC:2.7.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexokinase activity","termid":"GO:0004396"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"fructokinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:FRUCTOKINASE-RXN","RHEA:16125"],"synonyms":[{"name":"ATP:D-fructose 6-phosphotransferase activity","type":"related"},{"name":"D-fructokinase activity","type":"related"},{"name":"D-fructose(D-mannose)kinase activity","type":"related"},{"name":"fructokinase (phosphorylating)","type":"related"}],"termid":"GO:0008865","terms_by_termid":{"GO:0008865":null}}


id: PBO:0116689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 17B","termid":"PBO:0116689"}


id: PBO:0043898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich protein 2","termid":"PBO:0043898"}


id: PBO:0120184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation initiation factor eIF4E; mRNA cap binding protein and subunit of the mRNA cap-binding complex (eIF4F) along with eIF4A and eIF4G, that mediates cap-dependent translation; required with eIF4G for Ded1p-mediated stimulation of mRNA recruitment during 48S preinitiation complex (PIC) assembly; connects protein synthesis to metabolic gene regulation; protein abundance increases in response to DNA replication stress; human homolog EIF4E can complement cdc33 mutants","termid":"PBO:0120184"}


id: GO:1904752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vascular associated smooth muscle cell migration.","definition_xrefs":["GOC:BHF_miRNA","GOC:TermGenie","GOC:rph","GO_REF:0000058","GOC:BHF","PMID:20693317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle cell migration","termid":"GO:0014910"},{"relation_name":"regulates","term_name":"vascular associated smooth muscle cell migration","termid":"GO:1904738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular associated smooth muscle cell migration","synonyms":[{"name":"regulation of vascular smooth muscle cell migration","type":"exact"}],"termid":"GO:1904752"}


id: GO:0080004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a thalian-diol = a desaturated thalian-diol. This reaction is the introduction of a double bond to a thalian-diol molecule at carbon 15.","definition_xrefs":["PMID:18356490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"thalian-diol desaturase activity","secondary_identifiers":["MetaCyc:RXN-9637"],"termid":"GO:0080004"}


id: PBO:0052975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L3MBTL4 antisense RNA 1","termid":"PBO:0052975"}


id: PBO:0039309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALKBH3 antisense RNA 1","termid":"PBO:0039309"}


id: PBO:0079150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 11","termid":"PBO:0079150"}


id: GO:0099103
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Direct interaction with a channel (binding or modification), resulting in its opening. A channel catalyzes energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"channel regulator activity","termid":"GO:0016247"},{"relation_name":"is_a","term_name":"transporter activator activity","termid":"GO:0141109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0140677","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"channel activator activity","synonyms":[{"name":"channel gating activity","type":"exact"}],"termid":"GO:0099103"}


id: GO:0085032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts an NF-kappaB-mediated signaling cascade in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host signal transduction pathway","termid":"GO:0052027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host NF-kappaB cascade","synonyms":[{"name":"modulation by symbiont of host I-kappaB kinase/NF-kappaB cascade","type":"related"},{"name":"modulation by symbiont of host NF-kappaB-mediated signal transduction pathway","type":"exact"},{"name":"perturbation of host I-kappaB kinase/NF-kappaB cascade","type":"exact"},{"name":"perturbation of host canonical NF-kappaB cascade","type":"related"},{"name":"symbiont-mediated perturbation of host canonical NF-kappaB cascade","type":"related"}],"termid":"GO:0085032"}


id: PR:Q10436
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC12B10.02c gene.","definition_xrefs":["UniProtKB:Q10436","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C12B10.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.02c","synonyms":[{"name":"Spom972h-SPAC12B10.02c","type":"exact"}],"termid":"PR:Q10436"}


id: GO:0002551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a mast cell in response to an external stimulus.","definition_xrefs":["GOC:add","PMID:12789214","PMID:11292027","PMID:16448392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte chemotaxis","termid":"GO:0030595"},{"relation_name":"is_a","term_name":"mast cell migration","termid":"GO:0097531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mast cell chemotaxis","termid":"GO:0002551"}


id: FYPO:0006256
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cohesin unloading is normal (i.e. indistinguishable from wild type). Cohesin unloading is the topological unlinking of a cohesin ring complex from chromatin, which negatively regulates sister chromatid cohesion.","definition_xrefs":["PomBase:mah","GO:0061781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal mitotic cohesin unloading","synonyms":[{"name":"normal cohesin unloading during mitotic cell cycle","type":"exact"},{"name":"normal cohesin unloading during vegetative growth","type":"exact"}],"termid":"FYPO:0006256"}


id: PBO:0017002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human TMEM186 ortholog","termid":"PBO:0017002"}


id: PBO:0027864
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K4_acetylation","termid":"PBO:0027864"}


id: PBO:0042117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 188B, pseudogene","termid":"PBO:0042117"}


id: PBO:0085095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear import receptor; mediates the nuclear localization of proteins involved in mRNA-nucleus export; promotes dissociation of mRNAs from the nucleus-cytoplasm mRNA shuttling protein Npl3p; required for retrograde import of mature tRNAs; relocalizes from cytoplasm to the nuclear periphery upon DNA replication stress","termid":"PBO:0085095"}


id: GO:1902998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neurofibrillary tangle assembly.","definition_xrefs":["GOC:TermGenie","PMID:15897157","GO_REF:0000058","GOC:sjp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of inclusion body assembly","termid":"GO:0090261"},{"relation_name":"is_a","term_name":"regulation of neurofibrillary tangle assembly","termid":"GO:1902996"},{"relation_name":"positively_regulates","term_name":"neurofibrillary tangle assembly","termid":"GO:1902988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of neurofibrillary tangle assembly","synonyms":[{"name":"activation of flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"activation of flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"activation of neurofibrillary tangle assembly","type":"narrow"},{"name":"activation of neurofibrillary tangle formation","type":"narrow"},{"name":"activation of star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"activation of star-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"positive regulation of flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"positive regulation of flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"positive regulation of neurofibrillary tangle formation","type":"exact"},{"name":"positive regulation of star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"positive regulation of star-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"up regulation of flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"up regulation of flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"up regulation of neurofibrillary tangle assembly","type":"exact"},{"name":"up regulation of neurofibrillary tangle formation","type":"exact"},{"name":"up regulation of star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"up regulation of star-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"up-regulation of flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"up-regulation of flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"up-regulation of neurofibrillary tangle assembly","type":"exact"},{"name":"up-regulation of neurofibrillary tangle formation","type":"exact"},{"name":"up-regulation of star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"up-regulation of star-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"upregulation of flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"upregulation of flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"upregulation of neurofibrillary tangle assembly","type":"exact"},{"name":"upregulation of neurofibrillary tangle formation","type":"exact"},{"name":"upregulation of star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"upregulation of star-shaped neurofibrillary tangle formation","type":"narrow"}],"termid":"GO:1902998"}


id: MONDO:0020768
data:
  {"annotated_genes":["SJAG_04882","SJAG_03811","SJAG_02016"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87167,87168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010577"},{"annotations":[88992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010378"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"hearing loss disorder","termid":"MONDO:0005365"},{"relation_name":"is_a","term_name":"inherited auditory system disease","termid":"MONDO:0037940"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02016":null,"SJAG_03811":null,"SJAG_04882":null},"genotype_count":0,"is_obsolete":false,"name":"X-linked deafness","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:304500"],"synonyms":[{"name":"DFNX","type":"exact"},{"name":"X-linked deafness","type":"exact"},{"name":"deafness, X-linked","type":"exact"},{"name":"deafness, X-linked, DFN","type":"exact"}],"termid":"MONDO:0020768","terms_by_termid":{"MONDO:0010378":null,"MONDO:0010577":null},"xrefs":{"Monarch":{"xref_id":"0020768"}}}


id: GO:1990331
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tetrameric protein complex capable of acetyltransferase activity. It can catalyze the transfer of an acetyl group from acetyl-CoA to an acceptor residue on histone H-3, histone H-4, or on polyamines. The complex is also capable of acetylating certain small basic proteins. The two Hpa2 dimers that make up the tetramer are held together by interactions between the bound acetyl-CoA molecules.","definition_xrefs":["GOC:bhm","PMID:10600387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H3 histone acetyltransferase complex","termid":"GO:0070775"},{"relation_name":"is_a","term_name":"H4 histone acetyltransferase complex","termid":"GO:1902562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"Hpa2 acetyltransferase complex","termid":"GO:1990331"}


id: PBO:0047644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase family member 1C","termid":"PBO:0047644"}


id: GO:0043513
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Heterodimeric hormone composed of an inhibin alpha subunit complexed with an inhibin beta-B subunit.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibin complex","termid":"GO:0043511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005576"],"is_obsolete":false,"name":"inhibin B complex","termid":"GO:0043513"}


id: MONDO:0044726
data:
  {"annotated_genes":["SJAG_04260"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87214],"is_not":false,"summary":null,"term":"MONDO:0044726"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"},{"relation_name":"is_a","term_name":"disorder of zinc metabolism","termid":"MONDO:0017764"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04260":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005559","MONDO:0005240"],"is_obsolete":false,"name":"psychomotor regression-oculomotor apraxia-movement disorder-nephropathy syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1621949","Orphanet:505242","GARD:17943","OMIM:617595","UMLS:C4539828"],"synonyms":[{"name":"BILAPES","type":"related"},{"name":"Birk-Landau-Perez syndrome","type":"related"},{"name":"Cerebrorenal syndrome, Perez type","type":"exact"}],"termid":"MONDO:0044726","terms_by_termid":{"MONDO:0044726":null},"xrefs":{"Monarch":{"xref_id":"0044726"}}}


id: PBO:0113061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the EKC/KEOPS protein complex; EKC/KEOPS complex is required for t6A tRNA modification and telomeric TG1-3 recombination; may have role in transcription; other complex members are Kae1p, Gon7p, Bud32p, and Cgi121p; ortholog of human LAGE3","termid":"PBO:0113061"}


id: PBO:0090124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protease Ste24","termid":"PBO:0090124"}


id: MONDO:0030013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 66","secondary_identifiers":["OMIM:618847","UMLS:C5394265","MEDGEN:1717128","DOID:0111998"],"synonyms":[{"name":"IMD66","type":"exact"},{"name":"IMMUNODEFICIENCY 66","type":"exact"},{"name":"immunodeficiency 66","type":"exact"}],"termid":"MONDO:0030013","xrefs":{"Monarch":{"xref_id":"0030013"}}}


id: FYPO:0002892
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of heterochromatin organization is normal (i.e. indistinguishable from wild type) in the vegetative growth phase of the life cycle. Heterochromatin organization results in the specification, formation or maintenance of the physical structure of eukaryotic heterochromatin, a compact and highly condensed form of chromatin.","definition_xrefs":["PomBase:mah","GO:0070828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin organization during vegetative growth","termid":"FYPO:0002891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal heterochromatin organization during vegetative growth","synonyms":[{"name":"normal heterochromatin organisation during vegetative growth","type":"exact"},{"name":"normal heterochromatin organization during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002892"}


id: PBO:0116706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily BS member 1","termid":"PBO:0116706"}


id: MONDO:0010749
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by short stature, trigonocephaly and developmental delay. It has been described in three males. Moderate intellectual deficit was reported in one of the males and the other two patients displayed psychomotor retardation. X-linked transmission has been suggested but autosomal recessive inheritance can not be ruled out.","definition_xrefs":["Orphanet:3369"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trigonocephaly-short stature-developmental delay syndrome","secondary_identifiers":["MEDGEN:374138","MESH:C536620","OMIM:314320","UMLS:C1839125","GARD:243","SCTID:733066002"],"synonyms":[{"name":"Say Meyer syndrome","type":"related"},{"name":"Say-Meyer syndrome","type":"exact"},{"name":"trigonocephaly with short stature and developmental delay","type":"related"},{"name":"trigonocephaly, short stature and developmental delay","type":"related"},{"name":"trigonocephaly, short stature, and retarded psychomotor development","type":"related"}],"termid":"MONDO:0010749","xrefs":{"Monarch":{"xref_id":"0010749"}}}


id: PBO:0040010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 17B","termid":"PBO:0040010"}


id: PBO:0074136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member A1","termid":"PBO:0074136"}


id: PBO:0074548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF8 pseudogene 1","termid":"PBO:0074548"}


id: GO:0032591
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a dendritic spine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection membrane","termid":"GO:0032589"},{"relation_name":"is_a","term_name":"synaptic membrane","termid":"GO:0097060"},{"relation_name":"part_of","term_name":"dendrite membrane","termid":"GO:0032590"},{"relation_name":"part_of","term_name":"dendritic spine","termid":"GO:0043197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"dendritic spine membrane","termid":"GO:0032591"}


id: PBO:0082565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chaperone protein for translation factor eEF2; involved in biogenesis of eukaryotic Elongation Factor 2 (Eft1p, Eft2p); green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; similar to mammalian BRP16 (Brain protein 16); relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0082565"}


id: PATO:0002304
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a process that has a value that is increased compared to normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"},{"relation_name":"is_a","term_name":"increased quality","termid":"PATO:0002300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased process quality","termid":"PATO:0002304"}


id: GO:0038080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in a MAP kinase (MAPK) substrate, as part of a MAPK signaling cascade that passes on a signal within an osmosensory signaling pathway.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase kinase activity involved in osmosensory signaling pathway (obsolete GO:0038080)","synonyms":[{"name":"MAP kinase kinase activity involved in osmosensory signalling pathway","type":"exact"},{"name":"MAP2K activity involved in osmosensory signaling pathway","type":"exact"},{"name":"MAPKK activity involved in osmosensory signaling pathway","type":"exact"}],"termid":"GO:0038080"}


id: MONDO:0009040
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniosynostosis-intellectual disability syndrome of 51N and Gettig","secondary_identifiers":["OMIM:218649","MEDGEN:341781","UMLS:C1857473","MESH:C565664"],"synonyms":[{"name":"Lin-Gettig syndrome","type":"related"},{"name":"craniosynostosis-intellectual disability syndrome of Lin and Gettig","type":"related"},{"name":"craniosynostosis-mental retardation syndrome of Lin and Gettig","type":"related"}],"termid":"MONDO:0009040","xrefs":{"Monarch":{"xref_id":"0009040"}}}


id: MONDO:0014289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Macrocephaly-developmental delay syndrome is a rare, intellectual disability syndrome characterized by macrocephaly, mild dysmorphic features (frontal bossing, long face, hooded eye lids with small, downslanting palpebral fissures, broad nasal bridge, and prominent chin), global neurodevelopmental delay, behavioral abnormalities (e.g. anxiety, stereotyped movements) and absence or generalized tonic-clonic seizures. Additional features reported in some patients include craniosynostosis, fifth finger clinodactyly, recurrent pneumonia, and hepatosplenomegally.","definition_xrefs":["Orphanet:397612"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrocephaly-developmental delay syndrome","secondary_identifiers":["OMIM:615637","GARD:17630","MEDGEN:816555","UMLS:C3810225","DOID:0081206"],"synonyms":[{"name":"MRT41","type":"related"},{"name":"intellectual disability, autosomal recessive 41","type":"related"},{"name":"intellectual disability, autosomal recessive type 41","type":"exact"},{"name":"mental retardation, autosomal recessive 41","type":"related"},{"name":"mental retardation, autosomal recessive type 41","type":"exact"}],"termid":"MONDO:0014289","xrefs":{"Monarch":{"xref_id":"0014289"}}}


id: PBO:0059888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 11","termid":"PBO:0059888"}


id: FYPO:0005032
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which mutations occur at a normal (i.e. indistinguishable from wild type) frequency.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"vegetative cell phenotype","termid":"FYPO:0001320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal mutation rate","synonyms":[{"name":"normal mutation rate during mitotic cell cycle","type":"related"},{"name":"normal mutation rate during vegetative growth","type":"exact"}],"termid":"FYPO:0005032"}


id: MONDO:0054726
data:
  {"annotated_genes":["SJAG_00377"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86997],"is_not":false,"summary":null,"term":"MONDO:0054726"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00377":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 22","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:617706","UMLS:C4540179","DOID:0070177","GARD:16245","MEDGEN:1618089"],"synonyms":[{"name":"SPGF22","type":"related"},{"name":"spermatogenic failure 22","type":"exact"}],"termid":"MONDO:0054726","terms_by_termid":{"MONDO:0054726":null},"xrefs":{"Monarch":{"xref_id":"0054726"}}}


id: PBO:0004552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyacyl-ACP dehydratase Htd2 (predicted)","termid":"PBO:0004552"}


id: PBO:0078678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon TTT) 11-1","termid":"PBO:0078678"}


id: MONDO:0020637
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited susceptibility to mycobacterial diseases","termid":"MONDO:0019146"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mendelian susceptibility to mycobacterial diseases due to a partial deficiency","termid":"MONDO:0020637","xrefs":{"Monarch":{"xref_id":"0020637"}}}


id: MONDO:0010959
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Van den Ende-Gupta syndrome is a very rare syndrome characterized by blepharophimosis, arachnodactyly, joint contractures, and characteristic dysmorphic features.","definition_xrefs":["Orphanet:2460"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita","termid":"MONDO:0015168"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"van den Ende-Gupta syndrome","secondary_identifiers":["OMIM:600920","DOID:0111699","GARD:3382","UMLS:C1833136","MEDGEN:322127","SCTID:719845008","MESH:C535909","icd11.foundation:1740735985"],"synonyms":[{"name":"Marden Walker like syndrome","type":"related"},{"name":"Marden Walker like syndrome without psychomotor retardation","type":"related"},{"name":"Marden-Walker-like syndrome","type":"exact"},{"name":"Marden-Walker-like syndrome without psychomotor retardation","type":"related"},{"name":"VAN DEN Ende-Gupta syndrome","type":"related"},{"name":"VDEGS","type":"exact"},{"name":"Van den Ende Gupta syndrome","type":"related"},{"name":"blepharophimosis, arachnodactyly, and congenital contractures","type":"related"},{"name":"van den Ende-Gupta syndrome","type":"exact"}],"termid":"MONDO:0010959","xrefs":{"Monarch":{"xref_id":"0010959"}}}


id: PBO:0061120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family pyrin domain containing 9 pseudogene 1","termid":"PBO:0061120"}


id: PBO:0028819
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_replication_forks_during_cellular_response_to_hydroxyurea","termid":"PBO:0028819"}


id: GO:0032373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of sterols into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"regulation of sterol transport","termid":"GO:0032371"},{"relation_name":"positively_regulates","term_name":"sterol transport","termid":"GO:0015918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of sterol transport","synonyms":[{"name":"activation of sterol transport","type":"narrow"},{"name":"stimulation of sterol transport","type":"narrow"},{"name":"up regulation of sterol transport","type":"exact"},{"name":"up-regulation of sterol transport","type":"exact"},{"name":"upregulation of sterol transport","type":"exact"}],"termid":"GO:0032373"}


id: PBO:0053911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1205","termid":"PBO:0053911"}


id: FYPO:0002737
data:
  {"alleles_by_uniquename":{"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[121354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[121480],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"},{"annotations":[121350],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0000118"}],"single_locus_phenotype":[{"annotations":[121342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[121055,121056,121057],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"FYPO:0000671"},{"annotations":[121318,121073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[121288,121099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004318"},{"annotations":[121375],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0002026"},{"annotations":[120992,121343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[121481],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"},{"annotations":[121451,121450,121452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000324"},{"annotations":[121339,121340],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0000118"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell does not execute a mitotic cell cycle process normally. 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pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"mid2delta":{"display_name":"mid2delta","display_uniquename":"mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild 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mitotic cell cycle process during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic cell cycle process during vegetative growth","type":"exact"}],"termid":"FYPO:0002737","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000118":null,"FYPO:0000231":null,"FYPO:0000324":null,"FYPO:0000671":null,"FYPO:0000729":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0002998":null,"FYPO:0004318":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: MONDO:0958242
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 90","secondary_identifiers":["MEDGEN:1853928","OMIM:620744","DOID:0070589","UMLS:C5935587"],"termid":"MONDO:0958242","xrefs":{"Monarch":{"xref_id":"0958242"}}}


id: GO:0003191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the coronary sinus valve from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve formation","termid":"GO:0003188"},{"relation_name":"part_of","term_name":"coronary sinus valve morphogenesis","termid":"GO:0003182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"coronary sinus valve formation","termid":"GO:0003191"}


id: MONDO:0006517
data:
  {"annotated_genes":["SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88138],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"}]},"cv_name":"mondo","definition":"A malignant tumor that occurs in children. Representative examples include soft tissue and bone sarcomas (e.g. osteosarcoma) and embryonal neoplasms (e.g. hepatoblastoma and rhabdoid tumor).","definition_xrefs":["NCIT:C4005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"childhood neoplasm","termid":"MONDO:0021079"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood malignant neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:1000654","MEDGEN:82962","UMLS:C0278704"],"synonyms":[{"name":"childhood cancer","type":"exact"},{"name":"childhood malignant neoplasm","type":"exact"},{"name":"childhood neoplasm, malignant","type":"exact"},{"name":"malignant childhood neoplasm","type":"exact"},{"name":"malignant childhood tumor","type":"exact"},{"name":"malignant childhood tumour","type":"exact"},{"name":"malignant neoplasm","type":"narrow"},{"name":"malignant paediatric neoplasm","type":"exact"},{"name":"malignant paediatric tumour","type":"exact"},{"name":"malignant pediatric neoplasm","type":"exact"},{"name":"malignant pediatric tumor","type":"exact"},{"name":"paediatric cancer","type":"exact"},{"name":"pediatric cancer","type":"exact"}],"termid":"MONDO:0006517","terms_by_termid":{"MONDO:0011014":null},"xrefs":{"Monarch":{"xref_id":"0006517"}}}


id: GO:0097737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A maturation process by which an organism acquires the ability to reproduce. In fungi, reproductive competence only occurs in a population of filamentous cells that form a mycelium.","definition_xrefs":["PMID:23864594","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acquisition of mycelium reproductive competence","synonyms":[{"name":"mycelium developmental competence","type":"related"}],"termid":"GO:0097737"}


id: PBO:0044272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine ligand 12","termid":"PBO:0044272"}


id: PBO:0069317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 575, pseudogene","termid":"PBO:0069317"}


id: MONDO:1040044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any ciliopathy caused by variants in the BBS4 gene.","definition_xrefs":["PMID:11381270","PMID:15654695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliopathy","termid":"MONDO:0005308"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BBS4-related ciliopathy","synonyms":[{"name":"BBS4-related ciliopathy","type":"exact"}],"termid":"MONDO:1040044","xrefs":{"Monarch":{"xref_id":"1040044"}}}


id: GO:0019382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of carbon tetrachloride, a toxic, carcinogenic compound which is used as a general solvent in industrial degreasing operations. It is also used as grain fumigant and a chemical intermediate in the production of refrigerants.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon tetrachloride metabolic process","termid":"GO:0018885"},{"relation_name":"is_a","term_name":"halogenated hydrocarbon catabolic process","termid":"GO:0042206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carbon tetrachloride catabolic process","synonyms":[{"name":"carbon tetrachloride breakdown","type":"exact"},{"name":"carbon tetrachloride catabolism","type":"exact"},{"name":"carbon tetrachloride degradation","type":"exact"}],"termid":"GO:0019382"}


id: MONDO:0009721
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nathalie syndrome is characterized by deafness, cataract, muscular atrophy, skeletal abnormalities, growth retardation, underdeveloped secondary sexual characteristics, and electrocardiographic abnormalities. It has been described in a Dutch family: in three sisters (one named Nathalie) and their brother.","definition_xrefs":["Orphanet:2663"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nathalie syndrome","secondary_identifiers":["UMLS:C1850626","OMIM:255990","MEDGEN:338087","MESH:C538342","SCTID:716170005","GARD:3929"],"synonyms":[{"name":"Nathalie syndrome","type":"exact"},{"name":"deafness, cataract, muscular atrophy, skeletal abnormalities, growth retardation, underdeveloped secondary sexual characteristics","type":"related"},{"name":"deafness-cataract-skeletal anomalies syndrome","type":"exact"},{"name":"deafness-cataracts-skeletal anomalies syndrome","type":"exact"},{"name":"sensorineural hearing loss-cataract-skeletal anomalies-cardiomyopathy syndrome","type":"exact"}],"termid":"MONDO:0009721","xrefs":{"Monarch":{"xref_id":"0009721"}}}


id: PATO:0000138
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000138 absolute orientation (obsolete PATO:0000138)","termid":"PATO:0000138"}


id: GO:1900928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-threonine import into cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"regulation of L-threonine import across plasma membrane","termid":"GO:1900926"},{"relation_name":"positively_regulates","term_name":"L-threonine import across plasma membrane","termid":"GO:1903807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"positive regulation of L-threonine import across plasma membrane","synonyms":[{"name":"activation of L-threonine import","type":"narrow"},{"name":"activation of L-threonine uptake","type":"narrow"},{"name":"positive regulation of L-threonine import","type":"broad"},{"name":"positive regulation of L-threonine uptake","type":"related"},{"name":"up regulation of L-threonine import","type":"exact"},{"name":"up regulation of L-threonine uptake","type":"related"},{"name":"up-regulation of L-threonine import","type":"exact"},{"name":"up-regulation of L-threonine uptake","type":"related"},{"name":"upregulation of L-threonine import","type":"exact"},{"name":"upregulation of L-threonine uptake","type":"related"}],"termid":"GO:1900928"}


id: GO:1900703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of orcinol biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of orcinol biosynthetic process","termid":"GO:1900701"},{"relation_name":"positively_regulates","term_name":"orcinol biosynthetic process","termid":"GO:0046197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"positive regulation of orcinol biosynthetic process","synonyms":[{"name":"activation of orcinol anabolism","type":"exact"},{"name":"activation of orcinol biosynthesis","type":"exact"},{"name":"activation of orcinol biosynthetic process","type":"narrow"},{"name":"activation of orcinol formation","type":"exact"},{"name":"activation of orcinol synthesis","type":"exact"},{"name":"positive regulation of orcinol anabolism","type":"exact"},{"name":"positive regulation of orcinol biosynthesis","type":"exact"},{"name":"positive regulation of orcinol formation","type":"exact"},{"name":"positive regulation of orcinol synthesis","type":"exact"},{"name":"up regulation of orcinol anabolism","type":"exact"},{"name":"up regulation of orcinol biosynthesis","type":"exact"},{"name":"up regulation of orcinol biosynthetic process","type":"exact"},{"name":"up regulation of orcinol formation","type":"exact"},{"name":"up regulation of orcinol synthesis","type":"exact"},{"name":"up-regulation of orcinol anabolism","type":"exact"},{"name":"up-regulation of orcinol biosynthesis","type":"exact"},{"name":"up-regulation of orcinol biosynthetic process","type":"exact"},{"name":"up-regulation of orcinol formation","type":"exact"},{"name":"up-regulation of orcinol synthesis","type":"exact"},{"name":"upregulation of orcinol anabolism","type":"exact"},{"name":"upregulation of orcinol biosynthesis","type":"exact"},{"name":"upregulation of orcinol biosynthetic process","type":"exact"},{"name":"upregulation of orcinol formation","type":"exact"},{"name":"upregulation of orcinol synthesis","type":"exact"}],"termid":"GO:1900703"}


id: PBO:0027687
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_DNA-directed_DNA_polymerase_processivity","termid":"PBO:0027687"}


id: PBO:0060920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromin 1 pseudogene 7","termid":"PBO:0060920"}


id: FYPO:0005073
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic chromosome condensation occurs to a lower extent than normal along the chromosome arms.","definition_xrefs":["GO:1990892","PMID:21633354","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitotic chromosome condensation","termid":"FYPO:0003286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000641","FYPO:0001320","FYPO:0000002","FYPO:0000293","FYPO:0005447","FYPO:0000631","FYPO:0000337"],"is_obsolete":false,"name":"decreased mitotic chromosome arm condensation","synonyms":[{"name":"decreased chromosome arm condensation during mitotic cell cycle","type":"related"},{"name":"decreased mitotic chromosome arm chromatin condensation","type":"exact"},{"name":"decreased mitotic chromosome arm condensation during vegetative growth","type":"exact"},{"name":"decreased mitotic chromosome condensation along chromosome arms","type":"exact"},{"name":"reduced mitotic chromosome arm condensation","type":"exact"}],"termid":"FYPO:0005073"}


id: MONDO:0019390
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Susac syndrome (SS) is a rare disorder characterized by the triad of central nervous system (CNS) dysfunction, branch retinal artery occlusions (BRAOs) and sensorineural hearing loss (SNHL). It is presumably due to autoimmune-mediated occlusions of microvessels in the CNS, the retina, and the inner ear.","definition_xrefs":["Orphanet:838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Susac syndrome","secondary_identifiers":["MedDRA:10071573","EFO:1001856","icd11.foundation:1292480458","ICD9:348.39","MEDGEN:439270","MESH:D055955","SCTID:702575003","NORD:1747","UMLS:C2717757","NCIT:C116363","GARD:7713"],"synonyms":[{"name":"RED-M","type":"exact"},{"name":"Retinocochleocerebral vasculopathy","type":"exact"},{"name":"SICRET (small infarction of cochlear, retinal, and encephalic tissue) syndrome","type":"related"},{"name":"SICRET syndrome","type":"exact"},{"name":"retinopathy-encephalopathy-deafness associated with microangiopathy","type":"exact"},{"name":"small infarctions of cochlear, retinal and encephalic tissue","type":"exact"}],"termid":"MONDO:0019390","xrefs":{"Monarch":{"xref_id":"0019390"}}}


id: GO:0070651
data:
  {"annotated_genes":["SJAG_04818","SJAG_04824","SJAG_01191","SJAG_01818","SJAG_03507","SJAG_03745","SJAG_00854","SJAG_03179","SJAG_03728","SJAG_04321","SJAG_04084","SJAG_01521","SJAG_04283","SJAG_04153","SJAG_04006"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76286,94055,94887,97729,99052,99307,103898,106220,107088,108297,109290,109379,117304,117743,120178],"is_not":false,"summary":null,"term":"GO:0070651"}]},"cv_name":"biological_process","definition":"An rRNA catabolic process that results in the targeted detection and degradation of aberrant rRNAs contained within translationally defective ribosomes, thereby acting as a quality-control system.","definition_xrefs":["PMID:19390089","GOC:rn","GOC:mah","PMID:17188037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA catabolic process","termid":"GO:0016075"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_03179":null,"SJAG_03507":null,"SJAG_03728":null,"SJAG_03745":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04283":null,"SJAG_04321":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nonfunctional rRNA decay","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"NRD","type":"related"}],"termid":"GO:0070651","terms_by_termid":{"GO:0070651":null}}


id: GO:0051975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lysine via the intermediates alpha-aminoadipic acid and saccharopine. This pathway is used by yeast and fungi to synthesize the essential amino acid L-lysine, and pathway intermediates are often incorporated into secondary metabolic processes. The pathway proceeds as follows: alpha-ketoglutarate is converted to homocitrate, which is metabolized to 3-carboxyhex-2-enedioate and then homoisocitrate. This is then decarboxylated to form alpha-ketoadipate, which is then converted to alpha-aminoadipate. This is then reduced to form alpha-aminoadipate 6-semialdehyde, which is metabolized to saccharopine and finally L-lysine.","definition_xrefs":["MetaCyc:LYSINE-AMINOAD-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysine biosynthetic process via aminoadipic acid","termid":"GO:0019878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"lysine biosynthetic process via alpha-aminoadipate and saccharopine","synonyms":[{"name":"lysine biosynthesis via aminoadipic acid and saccharopine","type":"exact"},{"name":"lysine biosynthetic process via aminoadipic acid and saccharopine","type":"exact"}],"termid":"GO:0051975"}


id: PBO:0071481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 22","termid":"PBO:0071481"}


id: MONDO:0010507
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome X","termid":"MONDO:0017010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Xq25 microduplication syndrome","secondary_identifiers":["Orphanet:521258","OMIM:300979","UMLS:C4311049","MEDGEN:935016","NCIT:C177544","GARD:17955"],"synonyms":[{"name":"Xq25 duplication syndrome","type":"exact"},{"name":"Xq25 triplication syndrome","type":"related"}],"termid":"MONDO:0010507","xrefs":{"Monarch":{"xref_id":"0010507"}}}


id: GO:0070329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The substitution of a selenium atom for a sulfur atom in a ribonucleotide in a tRNA molecule.","definition_xrefs":["GOC:jsg","PMID:14594807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"selenium compound metabolic process","termid":"GO:0001887"},{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006399","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"tRNA seleno-modification","synonyms":[{"name":"tRNA base modification to selenouridine","type":"exact"}],"termid":"GO:0070329"}


id: GO:0071138
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha5-beta5 integrin complex bound to fibronectin and secreted frizzled-related protein 2.","definition_xrefs":["PMID:14709558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"alpha5-beta5-fibronectin-SFRP2 complex","synonyms":[{"name":"ITGA5-ITGB5-FN-1-SFRP2 complex","type":"narrow"}],"termid":"GO:0071138"}


id: GO:1903093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein K48-linked deubiquitination.","definition_xrefs":["GOC:bf","GO_REF:0000058","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein deubiquitination","termid":"GO:0090085"},{"relation_name":"regulates","term_name":"protein K48-linked deubiquitination","termid":"GO:0071108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"regulation of protein K48-linked deubiquitination","termid":"GO:1903093"}


id: MONDO:1010676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microtia that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtia, non-human animal","termid":"MONDO:1010091"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtia, pig","secondary_identifiers":["OMIA:001952-9823"],"termid":"MONDO:1010676","xrefs":{"Monarch":{"xref_id":"1010676"}}}


id: MONDO:0008515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare congenital distal limb malformation characterized by complete bilateral syndactyly (involving all digits 1 to 5).","definition_xrefs":["Orphanet:93405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic syndactyly","termid":"MONDO:0019530"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndactyly type 4","secondary_identifiers":["UMLS:C1861355","SCTID:719158007","MESH:C566092","icd11.foundation:75755208","GARD:4434","DOID:0111818","OMIM:186200","MEDGEN:350013"],"synonyms":[{"name":"Haas type syndactyly","type":"related"},{"name":"LMBR1 non-syndromic syndactyly","type":"exact"},{"name":"SDTY4","type":"related"},{"name":"Sd4","type":"related"},{"name":"non-syndromic syndactyly caused by mutation in LMBR1","type":"exact"},{"name":"polysyndactyly type Haas","type":"related"},{"name":"polysyndactyly, Haas type","type":"exact"},{"name":"syndactyly, type 4","type":"related"},{"name":"syndactyly, type IV","type":"related"}],"termid":"MONDO:0008515","xrefs":{"Monarch":{"xref_id":"0008515"}}}


id: GO:2000083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of L-ascorbic acid biosynthetic process.","definition_xrefs":["PMID:19395407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"negative regulation of vitamin metabolic process","termid":"GO:0046137"},{"relation_name":"is_a","term_name":"regulation of L-ascorbic acid biosynthetic process","termid":"GO:2000082"},{"relation_name":"negatively_regulates","term_name":"L-ascorbic acid biosynthetic process","termid":"GO:0019853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0006766"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281","GO:0006766"],"is_obsolete":false,"name":"negative regulation of L-ascorbic acid biosynthetic process","synonyms":[{"name":"negative regulation of L-ascorbic acid anabolism","type":"exact"},{"name":"negative regulation of L-ascorbic acid biosynthesis","type":"exact"},{"name":"negative regulation of L-ascorbic acid formation","type":"exact"},{"name":"negative regulation of L-ascorbic acid synthesis","type":"exact"},{"name":"negative regulation of ascorbate biosynthesis","type":"exact"},{"name":"negative regulation of ascorbate biosynthetic process","type":"exact"},{"name":"negative regulation of vitamin C biosynthesis","type":"exact"},{"name":"negative regulation of vitamin C biosynthetic process","type":"exact"}],"termid":"GO:2000083"}


id: PBO:0065979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleic acid export 1","termid":"PBO:0065979"}


id: PBO:0058673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6801","termid":"PBO:0058673"}


id: GO:0008286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of the insulin receptor binding to insulin.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"},{"relation_name":"part_of","term_name":"cellular response to insulin stimulus","termid":"GO:0032869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"insulin receptor signaling pathway","secondary_identifiers":["Reactome:R-HSA-74752"],"synonyms":[{"name":"daf-2 receptor signaling pathway","type":"narrow"},{"name":"insulin receptor signalling pathway","type":"exact"}],"termid":"GO:0008286"}


id: PBO:0025508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Coa6 (predicted)","termid":"PBO:0025508"}


id: FYPO:0007837
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is lower than normal at subtelomeric regions. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PomBase:mah","PMID:31837996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome positioning in heterochromatin","termid":"FYPO:0000855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000641","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased nucleosome occupancy at subtelomere","synonyms":[{"name":"decreased nucleosome occupancy at subtelomere during mitotic cell cycle","type":"related"},{"name":"decreased nucleosome occupancy at subtelomere during vegetative growth","type":"exact"},{"name":"reduced nucleosome occupancy at subtelomere","type":"exact"}],"termid":"FYPO:0007837"}


id: GO:0038053
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with estrogen and transmitting the signal to the transcriptional machinery by binding to an RNA polymerase II transcription factor, which may be a single protein or a complex, in order to modulate transcription. For example, estrogen-bound receptors can bind to transcription factor complexes to regulate transcription of genes whose promoters do not contain estrogen response elements.","definition_xrefs":["GOC:signaling","PMID:17615392"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, estrogen-activated RNA polymerase II transcription factor binding (obsolete GO:0038053)","synonyms":[{"name":"estrogen nuclear receptor activity","type":"broad"},{"name":"estrogen-activated RNA polymerase II transcription factor binding transcription factor activity","type":"exact"}],"termid":"GO:0038053"}


id: GO:0014803
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region between the inner and outer lipid bilayers of the longitudinal sarcoplasmic reticulum envelope. The longitudinal sarcoplasmic reticulum lumen is continuous with the lumen contained within the terminal cisternae.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoplasmic reticulum lumen","termid":"GO:0033018"},{"relation_name":"part_of","term_name":"longitudinal sarcoplasmic reticulum","termid":"GO:0014801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005783","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"longitudinal sarcoplasmic reticulum lumen","termid":"GO:0014803"}


id: GO:0051204
data:
  {"annotated_genes":["SJAG_05302","SJAG_01917","SJAG_03633","SJAG_05300","SJAG_01405"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76218,80289,58620,80031,80350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032979"}]},"cv_name":"biological_process","definition":"The process that results in the incorporation of a protein into a mitochondrial membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein insertion into membrane","termid":"GO:0051205"},{"relation_name":"is_a","term_name":"establishment of protein localization to mitochondrial membrane","termid":"GO:0090151"},{"relation_name":"part_of","term_name":"protein localization to mitochondrion","termid":"GO:0070585"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01405":null,"SJAG_01917":null,"SJAG_03633":null,"SJAG_05300":null,"SJAG_05302":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0007005","GO:0061024","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein insertion into mitochondrial membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"integral mitochondrial membrane protein localization","type":"exact"},{"name":"integral mitochondrial membrane protein positioning","type":"exact"},{"name":"localization of protein in mitochondrial membrane","type":"exact"},{"name":"positioning of protein in mitochondrial membrane","type":"exact"},{"name":"protein insertion into mitochondrion membrane","type":"exact"},{"name":"protein-mitochondrial membrane insertion","type":"exact"},{"name":"protein-mitochondrion membrane insertion","type":"exact"}],"termid":"GO:0051204","terms_by_termid":{"GO:0032979":null}}


id: PR:Q6MX60
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBCPT2R1.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q6MX60"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein CPT2R1.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBCPT2R1.02","synonyms":[{"name":"Spom972h-SPBCPT2R1.02","type":"exact"}],"termid":"PR:Q6MX60"}


id: GO:0004183
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: peptidyl-L-lysine (or peptidyl-L-arginine) + H2O = peptide + L-lysine (or L-arginine). Function is activated by Co2+ and inhibited by 1,10-phenanthroline and other chelating agents.","definition_xrefs":["EC:3.4.17.10"],"gene_count":0,"genotype_count":0,"name":"obsolete carboxypeptidase E activity (obsolete GO:0004183)","synonyms":[{"name":"carboxypeptidase E activity","type":"exact"},{"name":"carboxypeptidase H activity","type":"exact"},{"name":"cobalt-stimulated chromaffin granule carboxypeptidase activity","type":"related"},{"name":"enkephalin convertase activity","type":"narrow"},{"name":"enkephalin precursor carboxypeptidase activity","type":"related"},{"name":"enkephalin-precursor endopeptidase activity","type":"related"},{"name":"insulin granule-associated carboxypeptidase activity","type":"related"},{"name":"membrane-bound carboxypeptidase activity","type":"related"},{"name":"peptidyl-L-lysine(-L-arginine) hydrolase","type":"broad"}],"termid":"GO:0004183"}


id: GO:0036451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Methylation of the 2'-O-ribose of the first or second transcribed nucleotide of a 5'-capped mRNA.","definition_xrefs":["PMID:20713356","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete cap mRNA methylation (obsolete GO:0036451)","termid":"GO:0036451"}


id: PBO:0069686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 965, pseudogene","termid":"PBO:0069686"}


id: PBO:0072101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 32","termid":"PBO:0072101"}


id: MONDO:0971007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuroocular syndrome","termid":"MONDO:0859193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"neuroocular syndrome 1","secondary_identifiers":["Orphanet:659904","OMIM:619539","UMLS:C5925133","MEDGEN:1863661"],"termid":"MONDO:0971007","xrefs":{"Monarch":{"xref_id":"0971007"}}}


id: MONDO:0011964
data:
  {"annotated_genes":["SJAG_00924"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86810],"is_not":false,"summary":null,"term":"MONDO:0011964"}]},"cv_name":"mondo","definition":"DPAGT1-CDG is a form of congenital disorders of N-linked glycosylation characterized by hypotonia, intractable seizures, developmental delay, microcephaly and severe fetal hypokinesia. Additional features that may be observed include apnea and respiratory deficiency, cataracts, joint contractures, vermian hypoplasia, dysmorphic features (esotropia, arched palate, micrognathia, finger clinodactyly, single flexion creases) and feeding difficulties. The disease is caused by loss-of-function mutations in the gene DPAGT1 (11q23.3).","definition_xrefs":["Orphanet:86309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"},{"relation_name":"is_a","term_name":"disorder of protein N-glycosylation","termid":"MONDO:0017740"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00924":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"DPAGT1-congenital disorder of glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C2931004","OMIM:608093","MEDGEN:419694","SCTID:725079003","NCIT:C126874","GARD:9837","DOID:0080562","MESH:C535748"],"synonyms":[{"name":"CDG 1J","type":"related"},{"name":"CDG Ij","type":"related"},{"name":"CDG syndrome type Ij","type":"exact"},{"name":"CDG-Ij","type":"exact"},{"name":"CDG1J","type":"exact"},{"name":"CDGIj","type":"exact"},{"name":"DPAGT1-CDG","type":"exact"},{"name":"DPAGT1-CDG (CDG-Ij)","type":"related"},{"name":"DPAGT1-congenital disorder of glycosylation","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type Ij","type":"exact"},{"name":"congenital disorder of glycosylation type 1j","type":"exact"},{"name":"congenital disorder of glycosylation type Ij","type":"exact"},{"name":"congenital disorder of glycosylation, type Ij","type":"related"},{"name":"dolichyl-phosphate N-acetylgalactosamine phosphotransferase deficiency","type":"exact"}],"termid":"MONDO:0011964","terms_by_termid":{"MONDO:0011964":null},"xrefs":{"Monarch":{"xref_id":"0011964"}}}


id: GO:0006226
data:
  {"annotated_genes":["SJAG_04487","SJAG_03771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71648,81237],"is_not":false,"summary":null,"term":"GO:0006226"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dUMP, deoxyuridine monophosphate (2'-deoxyuridine 5'-phosphate).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside monophosphate biosynthetic process","termid":"GO:0009177"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide biosynthetic process","termid":"GO:0009221"},{"relation_name":"is_a","term_name":"dUMP metabolic process","termid":"GO:0046078"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03771":null,"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dUMP biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"dUMP anabolism","type":"exact"},{"name":"dUMP biosynthesis","type":"exact"},{"name":"dUMP formation","type":"exact"},{"name":"dUMP synthesis","type":"exact"}],"termid":"GO:0006226","terms_by_termid":{"GO:0006226":null}}


id: GO:0072559
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An inflammasome complex that consists of three components, NLRP3 (NALP3), PYCARD and caspase-1. It is activated upon exposure to whole pathogens, as well as a number of structurally diverse pathogen- and danger-associated molecular patterns (PAMPs and DAMPs) and environmental irritants. Whole pathogens demonstrated to activate the NLRP3 inflammasome complex include the fungi Candida albicans and Saccharomyces cerevisiae, bacteria that produce pore-forming toxins, including Listeria monocytogenes and Staphylococcus aureus, and viruses such as Sendai virus, adenovirus, and influenza virus.","definition_xrefs":["GOC:vp","PMID:20303873","GOC:add","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canonical inflammasome complex","termid":"GO:0061702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005829","GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"NLRP3 inflammasome complex","synonyms":[{"name":"NALP3 inflammasome complex","type":"exact"}],"termid":"GO:0072559"}


id: PBO:0038358
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-over-expressed_in","termid":"PBO:0038358"}


id: PBO:0066832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 131","termid":"PBO:0066832"}


id: MONDO:0007066
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine triphosphatase deficiency, anemia due to","secondary_identifiers":["MESH:C566311","UMLS:C1863225","Orphanet:1044","SCTID:725057008","GARD:548","MEDGEN:350115","OMIM:102800"],"synonyms":[{"name":"adenosine triphosphatase deficiency anaemia","type":"related"},{"name":"adenosine triphosphatase deficiency anemia","type":"related"},{"name":"adenosine triphosphatase deficiency, anemia due to","type":"exact"},{"name":"anaemia due to adenosine triphosphatase deficiency","type":"related"},{"name":"anemia due to adenosine triphosphatase deficiency","type":"related"}],"termid":"MONDO:0007066","xrefs":{"Monarch":{"xref_id":"0007066"}}}


id: PBO:0048953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOT2 pseudogene 4","termid":"PBO:0048953"}


id: GO:0070594
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a juvenile hormone response element (JHRE), a conserved sequence found in the promoters of genes whose expression is regulated in response to juvenile hormone.","definition_xrefs":["GOC:sart","PMID:17956872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding","termid":"GO:0000978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0000976"}],"interesting_parent_ids":["GO:0005488","GO:0000976","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"juvenile hormone response element binding","synonyms":[{"name":"JHRE binding","type":"exact"}],"termid":"GO:0070594"}


id: MONDO:0021569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Emery-Dreifuss muscular dystrophy inherited in an autosomal dominant pattern and caused by mutations in the LMNA gene.","definition_xrefs":["NCIT:C126745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy, limb-girdle, autosomal dominant","termid":"MONDO:0015151"},{"relation_name":"is_a","term_name":"autosomal dominant Emery-Dreifuss muscular dystrophy","termid":"MONDO:0020336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005267","MONDO:0005336"],"is_obsolete":false,"name":"Emery-Dreifuss muscular dystrophy 2, autosomal dominant","secondary_identifiers":["OMIM:181350","OMIM:159001","MESH:C535898","DOID:0110301","ICD9:425.4","SCTID:718178006","Orphanet:264","SCTID:240072005","MEDGEN:98048","GARD:10230","UMLS:C0410190","DOID:0070247"],"synonyms":[{"name":"EDMD2","type":"exact"},{"name":"EMD2","type":"related"},{"name":"Emery-Dreifuss muscular dystrophy 2, autosomal dominant","type":"exact"},{"name":"Emery-Dreifuss muscular dystrophy, autosomal dominant","type":"related"},{"name":"Hauptmann-Thannhauser muscular dystrophy","type":"exact"},{"name":"LGMD1B","type":"exact"},{"name":"LMNA autosomal dominant limb-girdle muscular dystrophy","type":"exact"},{"name":"autosomal dominant limb-girdle muscular dystrophy caused by mutation in LMNA","type":"exact"},{"name":"autosomal dominant limb-girdle muscular dystrophy type 1B","type":"exact"},{"name":"benign scapuloperoneal muscular dystrophy with cardiomyopathy","type":"related"},{"name":"limb-girdle muscular dystrophy due to lamin A/C deficiency","type":"exact"},{"name":"limb-girdle muscular dystrophy type 1B","type":"related"},{"name":"muscular dystrophy with early contractures and cardiomyopathy, autosomal dominant","type":"related"},{"name":"muscular dystrophy, limb-girdle type 1B","type":"exact"},{"name":"muscular dystrophy, limb-girdle, type 1B","type":"related"},{"name":"muscular dystrophy, proximal, type 1B","type":"related"},{"name":"proximal muscular dystrophy type 1B","type":"exact"},{"name":"scapuloilioperoneal atrophy with cardiopathy","type":"related"}],"termid":"MONDO:0021569","xrefs":{"Monarch":{"xref_id":"0021569"}}}


id: PR:O59814
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC794.04c gene.","definition_xrefs":["UniProtKB:O59814","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C794.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.04c","synonyms":[{"name":"Spom972h-SPCC794.04c","type":"exact"}],"termid":"PR:O59814"}


id: GO:0140598
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to and carrying a lipoprotein between two different cellular locations by moving along with the target lipoprotein.","definition_xrefs":["PMID:7628437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein carrier chaperone","termid":"GO:0140597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140597"}],"interesting_parent_ids":["GO:0140597","GO:0003674","GO:0140104"],"is_obsolete":false,"name":"lipoprotein carrier activity","termid":"GO:0140598"}


id: PBO:0090212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial lipoic acid synthetase Lip5","termid":"PBO:0090212"}


id: GO:0090428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the perianth over time, from its formation to the mature structure. The perianth is a collective phyllome structure composed of two or more petals, sepals, or tepals.","definition_xrefs":["PO:0009058","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral whorl development","termid":"GO:0048438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"perianth development","termid":"GO:0090428"}


id: PBO:0041023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BPI fold containing family B member 6","termid":"PBO:0041023"}


id: GO:0106264
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: GTP + L-seryl-[protein] = GDP + H+ + O-phospho-L-seryl-[protein].","definition_xrefs":["PMID:32322062","RHEA:64020","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0004672","GO:0003674","GO:0003824","GO:0016740","GO:0140096","GO:0016301"],"is_obsolete":false,"name":"protein serine kinase activity (using GTP as donor)","termid":"GO:0106264"}


id: FYPO:0005207
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle is normal (i.e. indistinguishable from wild type) when cells are shifted from one nitrogen source to another. Normally, cell division is delayed upon shifting from a poor to a rich nitrogen source, and accelerated upon shifting from a rich to a poor nitrogen source.","definition_xrefs":["PMID:21965528","PMID:689088","PMID:872891","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal mitotic cell cycle regulation upon nitrogen source shift","synonyms":[{"name":"normal cell cycle regulation upon nitrogen source shift","type":"exact"},{"name":"normal cell cycle regulation upon nitrogen source shift during mitotic cell cycle","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to nitrogen source shift","type":"exact"},{"name":"normal mitotic cell cycle regulation upon nitrogen source shift during vegetative growth","type":"exact"}],"termid":"FYPO:0005207"}


id: MONDO:0011678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 11","termid":"MONDO:0016893"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homozygous 11P15-p14 deletion syndrome","secondary_identifiers":["UMLS:C1847866","OMIM:606528","MESH:C564701","MEDGEN:338336"],"synonyms":[{"name":"chromosome 11p15-p14 deletion syndrome","type":"exact"},{"name":"homozygous 11P15-p14 deletion syndrome","type":"exact"},{"name":"hyperinsulinism, infantile, with enteropathy and deafness","type":"related"}],"termid":"MONDO:0011678","xrefs":{"Monarch":{"xref_id":"0011678"}}}


id: PBO:0072747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein A8","termid":"PBO:0072747"}


id: MONDO:0002191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign sweat gland neoplasm usually affecting the lower eyelids and upper cheeks. The lesions are papular and are usually numerous. Morphologically, there are nests, cords, and tubules of epithelial cells present, surrounded by a dense stroma in the reticular dermis.","definition_xrefs":["NCIT:C3761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sweat gland neoplasm","termid":"MONDO:0002381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"syringoma","secondary_identifiers":["SCTID:302828001","DOID:2065","MEDGEN:60205","UMLS:C0206673","icd11.foundation:1091480008","ICDO:8407/0","MESH:D018252"],"synonyms":[{"name":"eccrine syringoma","type":"exact"},{"name":"syringoma","type":"exact"}],"termid":"MONDO:0002191","xrefs":{"Monarch":{"xref_id":"0002191"}}}


id: PBO:0089057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine diphosphorylase Uap1/Qri1","termid":"PBO:0089057"}


id: PBO:0039530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 34A","termid":"PBO:0039530"}


id: MONDO:0020030
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic renal disease (obsolete MONDO:0020030)","secondary_identifiers":["Orphanet:98056"],"termid":"MONDO:0020030","xrefs":{"Monarch":{"xref_id":"0020030"}}}


id: MONDO:0012577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited susceptibility to asthma","termid":"MONDO:0010940"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asthma-related traits, susceptibility to, 4","secondary_identifiers":["OMIM:610906","UMLS:C1970474","MEDGEN:370920"],"synonyms":[{"name":"ASRT4","type":"related"},{"name":"asthma and allergic rhinitis, susceptibility to","type":"related"},{"name":"asthma-related traits, susceptibility to, 4","type":"exact"},{"name":"asthma-related traits, susceptibility to, type 4","type":"exact"}],"termid":"MONDO:0012577","xrefs":{"Monarch":{"xref_id":"0012577"}}}


id: PBO:0073988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 1 pseudogene 2","termid":"PBO:0073988"}


id: GO:0008764
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glutamate + ATP + UDP-N-acetylmuramoyl-L-alanine = ADP + 2 H+ + phosphate + UDP-N-acetylmuramoyl-L-alanyl-D-glutamate.","definition_xrefs":["RHEA:16429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"UDP-N-acetylmuramoylalanine-D-glutamate ligase activity","secondary_identifiers":["KEGG_REACTION:R02783","EC:6.3.2.9","MetaCyc:UDP-NACMURALA-GLU-LIG-RXN"],"synonyms":[{"name":"D-glutamate ligase activity","type":"related"},{"name":"D-glutamate-adding enzyme activity","type":"related"},{"name":"MurD synthetase activity","type":"related"},{"name":"UDP-Mur-NAC-L-Ala:D-Glu ligase activity","type":"related"},{"name":"UDP-N-acetylmuramoyl-L-alanine:glutamate ligase (ADP-forming)","type":"related"},{"name":"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase activity","type":"related"},{"name":"uridine diphospho-N-acetylmuramoylalanyl-D-glutamate synthetase activity","type":"related"}],"termid":"GO:0008764"}


id: GO:2001035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tongue muscle cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle fiber differentiation","termid":"GO:1902809"},{"relation_name":"regulates","term_name":"tongue muscle cell differentiation","termid":"GO:0035981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tongue muscle cell differentiation","termid":"GO:2001035"}


id: PBO:0005163
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRE1-like","termid":"PBO:0005163"}


id: GO:0140506
data:
  {"annotated_genes":["SJAG_04991"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101214],"is_not":false,"summary":null,"term":"GO:0140506"}]},"cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together an ER membrane and an autophagosome during reticulophagy.","definition_xrefs":["PMID:32735772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autophagosome-membrane adaptor activity","termid":"GO:0160183"},{"relation_name":"is_a","term_name":"endoplasmic reticulum-organelle membrane tether activity","termid":"GO:0170009"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04991":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0030674","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"endoplasmic reticulum-autophagosome adaptor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ER- autophagosome anchor","type":"exact"},{"name":"autophagosome-ER anchor","type":"exact"},{"name":"autophagosome-endoplasmic reticulum anchor","type":"exact"}],"termid":"GO:0140506","terms_by_termid":{"GO:0140506":null}}


id: PR:O13740
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mde1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mei4-dependent protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.05c","synonyms":[{"name":"Spom972h-mde1","type":"exact"}],"termid":"PR:O13740"}


id: GO:0055029
data:
  {"annotated_genes":["SJAG_03956","SJAG_04161","SJAG_03181","SJAG_02653","SJAG_00512","SJAG_00139","SJAG_01313","SJAG_00150","SJAG_02070","SJAG_04933","SJAG_04894","SJAG_02506","SJAG_04934","SJAG_01436","SJAG_01710","SJAG_03618","SJAG_00995","SJAG_00619","SJAG_01698","SJAG_02541","SJAG_04994","SJAG_01713","SJAG_00872","SJAG_00584","SJAG_03144","SJAG_01444","SJAG_00637","SJAG_03921","SJAG_02458","SJAG_02871","SJAG_00421","SJAG_01475","SJAG_04030","SJAG_00731","SJAG_01610","SJAG_03761","SJAG_01128","SJAG_02600","SJAG_00119","SJAG_01151","SJAG_01808","SJAG_03285","SJAG_00735","SJAG_04368","SJAG_04559","SJAG_01765","SJAG_04420","SJAG_01562","SJAG_00758","SJAG_02627","SJAG_00741","SJAG_01207","SJAG_04261","SJAG_04106","SJAG_03900","SJAG_02101","SJAG_03118","SJAG_05239","SJAG_03468","SJAG_03035","SJAG_02174","SJAG_04977","SJAG_00159","SJAG_00901","SJAG_04654","SJAG_00116","SJAG_02172","SJAG_00095","SJAG_03107","SJAG_00458","SJAG_04852","SJAG_04917","SJAG_03206","SJAG_04614","SJAG_04274","SJAG_04408","SJAG_03578"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76600,76987,74688,72132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005658"},{"annotations":[68492,72832,74265,80382,78002],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016593"},{"annotations":[117384,77485,106713,116074,75898,71841,104355,78706,72806,76277,79238,58456,69191,76925,77592,77278,78284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005736"},{"annotations":[79836,72402,114704,78282,77117,76923,78704,74469,75033,72804,76222,77276,80688],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0005665"},{"annotations":[72869,75897,78705,78599,75190,78283,57205,72805,118624,73037,71840,81415,64236,76924,77277,81553,76740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005666"},{"annotations":[80395,73786],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005672"},{"annotations":[76699,77314,78455,119427,78584,97391,73107,82082,76181,75389,69632,60015,72379,58180,71636,105433],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005669"},{"annotations":[77901,71895],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005673"},{"annotations":[80946,82197,71637],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005674"},{"annotations":[77905,71878,76126,72104,80463,93984,110821,116685],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005675"},{"annotations":[61470,77961,67369],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070985"}]},"cv_name":"cellular_component","definition":"A protein complex, located in the nucleus, that possesses DNA-directed RNA polymerase activity.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-directed RNA polymerase complex","termid":"GO:0000428"},{"relation_name":"is_a","term_name":"nuclear protein-containing 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DNA-directed RNA polymerase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0055029","terms_by_termid":{"GO:0005658":null,"GO:0005665":null,"GO:0005666":null,"GO:0005669":null,"GO:0005672":null,"GO:0005673":null,"GO:0005674":null,"GO:0005675":null,"GO:0005736":null,"GO:0016593":null,"GO:0070985":null}}


id: MONDO:0005780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any infection caused by a virus of the genus Hantavirus, which is transmitted by aerosolized rodent excreta or rodent bites, that can result in a variety of clinical manifestations from hemorrhagic fever with renal syndrome to a pulmonary syndrome.","definition_xrefs":["NCIT:C3899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bunyaviridae infectious disease","termid":"MONDO:0021641"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hantavirus infectious disease","secondary_identifiers":["MEDGEN:67028","MONDO:0042492","EFO:0007295","MESH:D018778","SCTID:359761005","UMLS:C0242994","ICD9:079.81"],"synonyms":[{"name":"Hantavirus caused disease or disorder","type":"exact"},{"name":"Hantavirus disease or disorder","type":"exact"},{"name":"Hantavirus infection","type":"exact"},{"name":"Hantavirus infectious disease","type":"exact"},{"name":"disease caused by hantavirus","type":"related"},{"name":"disease due to hantavirus","type":"exact"},{"name":"infections, Hantavirus","type":"related"}],"termid":"MONDO:0005780","xrefs":{"Monarch":{"xref_id":"0005780"}}}


id: MONDO:1011905
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"renal disease, non-human animal","termid":"MONDO:1011909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glomerulonephropathy, non-human animal","secondary_identifiers":["OMIA:000414"],"termid":"MONDO:1011905","xrefs":{"Monarch":{"xref_id":"1011905"}}}


id: MONDO:0007493
data:
  {"annotated_genes":["SJAG_04003"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86993],"is_not":false,"summary":null,"term":"MONDO:0007493"}]},"cv_name":"mondo","definition":"DYT4 type primary dystonia is characterized by predominantly laryngeal dystonia (manifesting as whispering dysphonia) and cervical dystonia (manifesting as torticollis).","definition_xrefs":["Orphanet:98805"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal, segmental or multifocal dystonia","termid":"MONDO:0015990"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"torsion dystonia 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0090041","SCTID:719276005","GARD:10138","MEDGEN:342124","OMIM:128101","UMLS:C1851943","NANDO:1200515"],"synonyms":[{"name":"DYT4","type":"exact"},{"name":"autosomal dominant torsion dystonia-4","type":"related"},{"name":"dystonia 4, torsion, autosomal dominant","type":"related"},{"name":"dystonia musculorum deformans 4","type":"related"},{"name":"hereditary whispering dysphonia","type":"exact"},{"name":"primary dystonia, DYT4 type","type":"related"},{"name":"torsion dystonia type 4","type":"exact"},{"name":"whispering dysphonia","type":"exact"},{"name":"whispering dysphonia, hereditary","type":"related"}],"termid":"MONDO:0007493","terms_by_termid":{"MONDO:0007493":null},"xrefs":{"Monarch":{"xref_id":"0007493"}}}


id: SO:0002287
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Dictyostelium intermediate repeat sequence (DIRS) retrotransposons are members of the YR_retrotransposon (SO:0002286) superfamily with the following protein domains: RT, RH, YR, and MT. RT is a reverse transcriptase. RH is RNAse H. YR is tyrosine recombinase. MT is DNA N-6-adenine-methyltransferase.","definition_xrefs":["PMID:24086727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"YR_retrotransposon","termid":"SO:0002286"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIRS_YR_retrotransposon","synonyms":[{"name":"DIRS YR retrotransposon","type":"exact"},{"name":"DIRS retrotransposon","type":"exact"},{"name":"RYD retrotransposon","type":"exact"}],"termid":"SO:0002287"}


id: PR:O60061
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dolichyl-phosphate beta-glucosyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10859:SF42","OMA:SCHPO03989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate beta-glucosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC56F2.10c","secondary_identifiers":["UniProtKB:O60061"],"synonyms":[{"name":"DolP-glucosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ALG5","type":"exact"},{"name":"asparagine-linked glycosylation protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60061"}


id: PBO:0018278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TREX complex subunit Pci2 (predicted)","termid":"PBO:0018278"}


id: PBO:0042307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD24 molecule pseudogene 1","termid":"PBO:0042307"}


id: MONDO:1011262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-progressive vision impairment in dim or absent lighting in dogs due to a variation in the LRIT3 gene.","definition_xrefs":["PMID:35316139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"congenital blindness, non-human animal","termid":"MONDO:1011975"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital stationary night blindness, LRIT3-related, dog","secondary_identifiers":["OMIA:001486-9615"],"termid":"MONDO:1011262","xrefs":{"Monarch":{"xref_id":"1011262"}}}


id: FYPO:0002782
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a greater extent than normal during a cellular response to a salt stress. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000294","FYPO:0001320"],"is_obsolete":false,"name":"increased transcription during cellular response to salt stress","synonyms":[{"name":"increased transcription during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"increased transcription during cellular response to salt stress during vegetative growth","type":"exact"}],"termid":"FYPO:0002782"}


id: MONDO:0021895
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A common disorder noted with jaw movement. It may be caused by malocclusion, repetitive use injury, trauma or arthritis. It is more prevalent among females between their second and fourth decades. Clinical signs include preauricular pain, temporomandibular joint clicking (as the mandibular condyle slips from the articulation made with the capsular disk and temporal bone) and restriction of jaw motion. Clinical course is typically benign but may progress to associated headaches, ear and neck pain, tinnitus and dislocation of temporomandibular joint. Prognosis is favorable as a majority of cases will respond to conservative management.","definition_xrefs":["NCIT:C35066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"temporomandibular joint disorder","termid":"MONDO:0005473"},{"relation_name":"is_a","term_name":"myofascial pain syndrome","termid":"MONDO:0006862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"temporomandibular joint dysfunction syndrome","secondary_identifiers":["MESH:D013706","UMLS:C0039496","MEDGEN:21093"],"synonyms":[{"name":"Costen Syndrome","type":"related"},{"name":"Costen's Syndrome","type":"related"},{"name":"Costen's complex","type":"related"},{"name":"Costen's syndrome","type":"related"},{"name":"Costens Syndrome","type":"related"},{"name":"Joint Syndrome, Temporomandibular","type":"related"},{"name":"Mandibular dysfunction","type":"related"},{"name":"Myofascial Pain Dysfunction Syndrome, Temporomandibular Joint","type":"related"},{"name":"Myofascial pain - dysfunction syndrome of TMJ","type":"related"},{"name":"Snapping jaw","type":"related"},{"name":"Syndrome, Costen's","type":"related"},{"name":"Syndrome, TMJ","type":"related"},{"name":"Syndrome, Temporomandibular Joint","type":"related"},{"name":"TMJ Syndrome","type":"related"},{"name":"TMJ syndrome","type":"related"},{"name":"TMJPDS - Temporomandibular joint pain dysfunction syndrome","type":"related"},{"name":"Temporomandibular Joint Dysfunction Syndrome","type":"related"},{"name":"Temporomandibular Joint Syndrome","type":"related"},{"name":"Temporomandibular joint pain dysfunction syndrome","type":"related"},{"name":"Temporomandibular joint syndrome","type":"related"},{"name":"Temporomandibular joint-pain-dysfunction syndrome","type":"related"},{"name":"temporomandibular joint dysfunction syndrome","type":"exact"}],"termid":"MONDO:0021895","xrefs":{"Monarch":{"xref_id":"0021895"}}}


id: PBO:0029030
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_mitotic_spindle_pole_body_during_interphase","termid":"PBO:0029030"}


id: PBO:0045650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 8","termid":"PBO:0045650"}


id: PBO:0034134
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_paraxenology_relationship_with","termid":"PBO:0034134"}


id: MONDO:0007434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary failure of tooth eruption","secondary_identifiers":["UMLS:C1852222","DOID:0111341","MESH:C565114","GARD:17692","MEDGEN:338882","OMIM:125350","Orphanet:412206"],"synonyms":[{"name":"PFE","type":"exact"},{"name":"dental noneruption","type":"related"},{"name":"failure of tooth eruption, primary","type":"related"},{"name":"posterior Openbite malocclusion, familial","type":"related"},{"name":"primary failure of eruption, nonsyndromic","type":"related"},{"name":"primary retention of teeth","type":"exact"},{"name":"unerupted second primary molar","type":"related"}],"termid":"MONDO:0007434","xrefs":{"Monarch":{"xref_id":"0007434"}}}


id: MONDO:0014623
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive primary microcephaly in which the cause of the disease is a mutation in the SASS6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly 14, primary, autosomal recessive","secondary_identifiers":["GARD:16105","UMLS:C4225338","OMIM:616402","DOID:0070279","MEDGEN:906798"],"synonyms":[{"name":"MCPH14","type":"related"},{"name":"SASS6 autosomal recessive primary microcephaly","type":"exact"},{"name":"autosomal recessive primary microcephaly caused by mutation in SASS6","type":"exact"},{"name":"microcephaly 14, primary, autosomal recessive","type":"exact"}],"termid":"MONDO:0014623","xrefs":{"Monarch":{"xref_id":"0014623"}}}


id: PBO:0004211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK inhibitor Rum1","termid":"PBO:0004211"}


id: PBO:0005891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Tryptophan, mitochondrial","termid":"PBO:0005891"}


id: PR:O42956
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- art1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin family protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.08c","synonyms":[{"name":"Spom972h-art1","type":"exact"}],"termid":"PR:O42956"}


id: PBO:0000916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geranyltranstransferase Fps1","termid":"PBO:0000916"}


id: PBO:0068169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 476","termid":"PBO:0068169"}


id: PBO:0005296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain protein, DNAJC11 family","termid":"PBO:0005296"}


id: PBO:0075658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spectrin beta, erythrocytic","termid":"PBO:0075658"}


id: PBO:0076099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 5","termid":"PBO:0076099"}


id: MONDO:1011526
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hepatic lipidosis that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatic lipidosis, non-human animal","termid":"MONDO:1011429"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatic lipidosis, cattle","secondary_identifiers":["OMIA:000605-9913"],"termid":"MONDO:1011526","xrefs":{"Monarch":{"xref_id":"1011526"}}}


id: PBO:0117108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHOBTB2 antisense RNA 1","termid":"PBO:0117108"}


id: PBO:0003865
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Eleven-nineteen Lysine rich in Leukemia","termid":"PBO:0003865"}


id: PBO:0003788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clathrin light chain","termid":"PBO:0003788"}


id: GO:1904576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tunicamycin stimulus.","definition_xrefs":["PMID:23106379","GOC:TermGenie","GO_REF:0000071"],"gene_count":0,"genotype_count":0,"name":"obsolete response to tunicamycin (obsolete GO:1904576)","termid":"GO:1904576"}


id: GO:0047679
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginine = D-arginine.","definition_xrefs":["EC:5.1.1.9","MetaCyc:ARGININE-RACEMASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"arginine racemase activity","secondary_identifiers":["RHEA:18069"],"termid":"GO:0047679"}


id: PBO:0116396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mug2/mug135/meu2 family protein, with repeat expansion","termid":"PBO:0116396"}


id: PBO:0004284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit Orc6","termid":"PBO:0004284"}


id: FYPO:0001312
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"711-723","gene_uniquename":"SJAG_01143","name":"mid1-delta(711-723 a.a.)","uniquename":"SJAG_01143:allele-2"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"},"SJAG_04883:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04883","name":"ptp4delta","uniquename":"SJAG_04883:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121430,121429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}],"single_locus_phenotype":[{"annotations":[121422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"},{"annotations":[120981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001007"},{"annotations":[121348],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000644"},{"annotations":[121420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000596"}]},"cv_name":"fission_yeast_phenotype","definition":"A normal phenotype that is observed when cells are in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null,"SJAG_04883":null},"genotype_count":5,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"mid1-delta(711-723 a.a.)(aa)","display_uniquename":"mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-2","expression":"Not assayed or wild type"}]}]},"ptp4delta":{"display_name":"ptp4delta","display_uniquename":"ptp4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04883:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02621","SJAG_03689","SJAG_03118"],"name":"normal vegetative phenotype","references_by_uniquename":{"PMID:25866389":null,"PMID:35226668":null,"PMID:36695178":null},"single_locus_annotated_genes":["SJAG_03689","SJAG_04883","SJAG_01143"],"single_locus_genotype_uniquenames":["ptp4delta","mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","dcr1delta"],"synonyms":[{"name":"fission yeast normal vegetative phenotype","type":"exact"}],"termid":"FYPO:0001312","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000596":null,"FYPO:0000644":null,"FYPO:0001007":null,"FYPO:0006989":null,"FYPO_EXT:0000001":null}}


id: GO:0072696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA recombination within the telomere.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA recombination","termid":"GO:0045911"},{"relation_name":"is_a","term_name":"regulation of DNA recombination at telomere","termid":"GO:0072695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006259"],"is_obsolete":false,"name":"positive regulation of DNA recombination at telomere","synonyms":[{"name":"activation of telomeric recombination at telomere","type":"narrow"},{"name":"positive regulation of telomeric recombination","type":"exact"},{"name":"up regulation of telomeric recombination at telomere","type":"exact"},{"name":"up-regulation of telomeric recombination at telomere","type":"exact"},{"name":"upregulation of telomeric recombination at telomere","type":"exact"}],"termid":"GO:0072696"}


id: PBO:0027595
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_binucleate_multiseptate_vegetative_cell","termid":"PBO:0027595"}


id: PBO:0030821
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_sodium_export","termid":"PBO:0030821"}


id: PBO:0089112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule severing ATPase Spg4","termid":"PBO:0089112"}


id: PBO:0070808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 38","termid":"PBO:0070808"}


id: PBO:0003211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RFC-like complex subunit Ctf18","termid":"PBO:0003211"}


id: SO:0002150
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A uORF beginning with the canonical start codon AUG.","definition_xrefs":["PMID:26684391","PMID:27313038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uORF","termid":"SO:0002027"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AUG_initiated_uORF","synonyms":[{"name":"AUG initiated uORF","type":"exact"}],"termid":"SO:0002150"}


id: PBO:0039473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 18C, pseudogene","termid":"PBO:0039473"}


id: FYPO:0000728
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patch assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cortical patch organization","termid":"FYPO:0000790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0004803","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal actin cortical patch assembly","synonyms":[{"name":"abnormal F-actin patch assembly","type":"exact"},{"name":"abnormal actin cortical patch assembly during mitotic cell cycle","type":"related"},{"name":"abnormal actin cortical patch assembly during vegetative growth","type":"exact"},{"name":"abnormal actin patch assembly","type":"exact"}],"termid":"FYPO:0000728"}


id: PBO:0072522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 51","termid":"PBO:0072522"}


id: PBO:0070279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 20","termid":"PBO:0070279"}


id: PBO:0085130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein involved in pre-rRNA processing; depletion causes severely decreased 18S rRNA levels","termid":"PBO:0085130"}


id: PBO:0073790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 5 member 10","termid":"PBO:0073790"}


id: FYPO:0006739
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at promoters that contain MCB sites is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:30134042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin at gene promoter region","termid":"FYPO:0008245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to chromatin at MCB promoters during vegetative growth","synonyms":[{"name":"normal protein localisation to chromatin at MCB promoters during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin at MCB promoters during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at MCB target genes during vegetative growth","type":"related"},{"name":"normal protein localization to chromatin at MCB-containing promoters during vegetative growth","type":"exact"}],"termid":"FYPO:0006739"}


id: PBO:0111750
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc20/Fizzy subfamily","termid":"PBO:0111750"}


id: PBO:0052780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 19 pseudogene 3","termid":"PBO:0052780"}


id: PR:O74384
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A palmitoyltransferase ZDHHC18 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03034","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase erf2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.09","secondary_identifiers":["UniProtKB:O74384"],"synonyms":[{"name":"DHHC cysteine-rich domain-containing protein erf2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ZDHHC18","type":"exact"},{"name":"meiotically up-regulated gene 142 protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ras protein acyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74384"}


id: GO:0045587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of gamma-delta T cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell differentiation","termid":"GO:0045581"},{"relation_name":"is_a","term_name":"regulation of gamma-delta T cell differentiation","termid":"GO:0045586"},{"relation_name":"is_a","term_name":"negative regulation of gamma-delta T cell activation","termid":"GO:0046644"},{"relation_name":"negatively_regulates","term_name":"gamma-delta T cell differentiation","termid":"GO:0042492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gamma-delta T cell differentiation","synonyms":[{"name":"down regulation of gamma-delta T cell differentiation","type":"exact"},{"name":"down-regulation of gamma-delta T cell differentiation","type":"exact"},{"name":"downregulation of gamma-delta T cell differentiation","type":"exact"},{"name":"inhibition of gamma-delta T cell differentiation","type":"narrow"},{"name":"negative regulation of gamma-delta T cell development","type":"related"},{"name":"negative regulation of gamma-delta T lymphocyte differentiation","type":"exact"},{"name":"negative regulation of gamma-delta T-cell differentiation","type":"exact"},{"name":"negative regulation of gamma-delta T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0045587"}


id: MONDO:0013164
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Beta-ureidopropionase deficiency is a very rare pyrimidine metabolism disorder described in fewer than 10 patients to date with an extremely wide clinical picture ranging from asymptomatic cases to neurological (epilepsy, autism) and developmental disorders (urogenital, colorectal).","definition_xrefs":["Orphanet:65287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of pyrimidine metabolism","termid":"MONDO:0019238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019254"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019254"],"is_obsolete":false,"name":"beta-ureidopropionase deficiency","secondary_identifiers":["MEDGEN:226944","SCTID:124511000","OMIM:613161","MESH:C563210","UMLS:C1291512","ICD9:277.6","icd11.foundation:1227425060","GARD:16669"],"synonyms":[{"name":"BETA-ureidopropionase deficiency","type":"related"},{"name":"Beta-alanine synthase deficiency","type":"exact"},{"name":"UPB1D","type":"related"},{"name":"beta-ureidopropionase deficiency","type":"exact"}],"termid":"MONDO:0013164","xrefs":{"Monarch":{"xref_id":"0013164"}}}


id: PBO:0087682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the mRNA cleavage and polyadenlylation factor (CPF); required for pre-mRNA cleavage, polyadenylation and poly(A) site recognition, 43% similarity with the mammalian CPSF-100 protein.","termid":"PBO:0087682"}


id: MONDO:0009632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microphthalmia with hyperopia, retinal degeneration, macrophakia, and dental anomalies","secondary_identifiers":["MESH:C566884","UMLS:C1968637","MEDGEN:368490","OMIM:251700"],"synonyms":[{"name":"microphthalmia with hyperopia, retinal degeneration, macrophakia, and dental anomalies","type":"exact"}],"termid":"MONDO:0009632","xrefs":{"Monarch":{"xref_id":"0009632"}}}


id: PBO:0075817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"slingshot protein phosphatase 1","termid":"PBO:0075817"}


id: MONDO:0000712
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete FTDALS (obsolete MONDO:0000712)","termid":"MONDO:0000712","xrefs":{"Monarch":{"xref_id":"0000712"}}}


id: PBO:0030746
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_substance_in_cell","termid":"PBO:0030746"}


id: GO:0008310
data:
  {"annotated_genes":["SJAG_02908","SJAG_00377"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75749,102962],"is_not":false,"summary":null,"term":"GO:0008310"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential cleavage of mononucleotides from a free 3' terminus of a single-stranded DNA molecule.","definition_xrefs":["GOC:mah","PMID:22562358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-5'-DNA exonuclease activity","termid":"GO:0008296"},{"relation_name":"is_a","term_name":"single-stranded DNA exodeoxyribonuclease activity","termid":"GO:0008297"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00377":null,"SJAG_02908":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0140097","GO:0004527","GO:0016787","GO:0003674","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"single-stranded DNA 3'-5' DNA exonuclease activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.11.1","MetaCyc:3.1.11.1-RXN"],"synonyms":[{"name":"exonuclease I activity","type":"narrow"},{"name":"single-stranded DNA 3'-5' exodeoxyribonuclease activity","type":"exact"},{"name":"single-stranded DNA specific 3'-5' exodeoxyribonuclease activity","type":"related"},{"name":"ssDNA-specific 3'-5' exodeoxyribonuclease activity","type":"related"}],"termid":"GO:0008310","terms_by_termid":{"GO:0008310":null}}


id: GO:1903260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a mating projection tip.","definition_xrefs":["GO_REF:0000087","GOC:TermGenie","PMID:11952834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell tip","termid":"GO:1990151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to mating projection tip","synonyms":[{"name":"protein localisation in mating projection tip","type":"exact"},{"name":"protein localisation to mating projection tip","type":"exact"},{"name":"protein localization in mating projection tip","type":"exact"},{"name":"protein localization to conjugation tube tip","type":"narrow"},{"name":"protein localization to shmoo tip","type":"narrow"}],"termid":"GO:1903260"}


id: MONDO:0003044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A chondrosarcoma that is located in exclusively soft tissue.","definition_xrefs":["PMID:16084955","DOID:4549"],"gene_count":0,"genotype_count":0,"name":"obsolete extraosseous chondrosarcoma (obsolete MONDO:0003044)","termid":"MONDO:0003044","xrefs":{"Monarch":{"xref_id":"0003044"}}}


id: GO:0019296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving coenzyme M (2-thioethansulfonate), a coenzyme involved in the utilization of methane by methanogenic prokaryotes.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid metabolic process","termid":"GO:0006082"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"coenzyme M metabolic process","synonyms":[{"name":"coenzyme M metabolism","type":"exact"}],"termid":"GO:0019296"}


id: GO:1904054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cholangiocyte proliferation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24434010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"cholangiocyte proliferation","termid":"GO:1990705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cholangiocyte proliferation","synonyms":[{"name":"regulation of hepatoblast proliferation","type":"exact"}],"termid":"GO:1904054"}


id: GO:0009559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the two uncellularized polar nuclei cellularize, fuse and acquire the specialized features of a mononucleate diploid central cell.","definition_xrefs":["GOC:jid","GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"megagametogenesis","termid":"GO:0009561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryo sac central cell differentiation","synonyms":[{"name":"embryo sac endosperm mother cell differentiation","type":"exact"},{"name":"female gametophyte central cell differentiation","type":"exact"}],"termid":"GO:0009559"}


id: GO:1903894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the IRE1-mediated unfolded protein response.","definition_xrefs":["GOC:PARL","GO_REF:0000058","PMID:22013210","GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endoplasmic reticulum unfolded protein response","termid":"GO:1900101"},{"relation_name":"regulates","term_name":"IRE1-mediated unfolded protein response","termid":"GO:0036498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of IRE1-mediated unfolded protein response","synonyms":[{"name":"regulation of ERN1-mediated unfolded protein response","type":"related"},{"name":"regulation of IRE1 branch of UPR","type":"exact"},{"name":"regulation of IRE1 signal transduction pathway","type":"broad"},{"name":"regulation of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"regulation of IRE1alpha unfolded protein response","type":"narrow"},{"name":"regulation of IRE1p unfolded protein response","type":"narrow"},{"name":"regulation of UPR signaling by IRE1 stress sensor","type":"exact"},{"name":"regulation of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"exact"},{"name":"regulation of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"}],"termid":"GO:1903894"}


id: MONDO:0020716
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial thyroid dyshormonogenesis","termid":"MONDO:0010132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"thyroid dyshormonogenesis 1","secondary_identifiers":["OMIM:274400","UMLS:C1848805","DOID:0112185","GARD:18188","MEDGEN:336422"],"synonyms":[{"name":"TDH1","type":"exact"},{"name":"familial thyroid dyshormonogenesis 1","type":"exact"},{"name":"hypothyroidism, congenital, due to dyshormonogenesis, 1","type":"exact"},{"name":"iodine accumulation, transport, or trapping defect","type":"exact"},{"name":"thyroid dyshormonogenesis type 1","type":"exact"},{"name":"thyroid hormonogenesis, genetic defect in, 1","type":"exact"}],"termid":"MONDO:0020716","xrefs":{"Monarch":{"xref_id":"0020716"}}}


id: GO:0051274
data:
  {"annotated_genes":["SJAG_03587","SJAG_04668","SJAG_01835","SJAG_04659","SJAG_04462","SJAG_04509","SJAG_03123","SJAG_00218","SJAG_02222","SJAG_01787","SJAG_00610","SJAG_01255","SJAG_04073","SJAG_03705","SJAG_02590","SJAG_00876","SJAG_01290","SJAG_04666","SJAG_01288","SJAG_01453","SJAG_04771","SJAG_04483","SJAG_02446","SJAG_05285"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64310,76920,78547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006078"},{"annotations":[96277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[74739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[72800,74742,117679,76257,115020,93413,107933,77603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[104462,79965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[89326,94233],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[89710],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032951"},{"annotations":[92582,94217,69409,119769,107743,107172,119902],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-glucans.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan biosynthetic process","termid":"GO:0009250"},{"relation_name":"is_a","term_name":"beta-glucan metabolic process","termid":"GO:0051273"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_01255":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01453":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_02446":null,"SJAG_02590":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04073":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"beta-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"beta-glucan anabolism","type":"exact"},{"name":"beta-glucan biosynthesis","type":"exact"},{"name":"beta-glucan formation","type":"exact"},{"name":"beta-glucan synthesis","type":"exact"}],"termid":"GO:0051274","terms_by_termid":{"GO:0006078":null,"GO:0032951":null,"GO:0034412":null,"GO:0034413":null,"GO:0070880":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: GO:0061925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces the frequency, rate or extent of the formation of radial glial scaffolds. The scaffolds are used as a substrate for the radial migration of cells.","definition_xrefs":["PMID:22076441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell morphogenesis","termid":"GO:0010771"},{"relation_name":"is_a","term_name":"regulation of formation of radial glial scaffolds","termid":"GO:0061924"},{"relation_name":"negatively_regulates","term_name":"formation of radial glial scaffolds","termid":"GO:0021943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of formation of radial glial scaffolds","synonyms":[{"name":"negative regulation of Bergmann fiber biosynthesis","type":"related"},{"name":"negative regulation of Bergmann fiber formation","type":"related"},{"name":"negative regulation of radial glial scaffold formation","type":"exact"}],"termid":"GO:0061925"}


id: GO:0044197
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Rel Homology Domain (RHD) of a protein. The RHD is found in a family of eukaryotic transcription factors, which includes NF-kappaB, Dorsal, Relish and NFAT.","definition_xrefs":["InterPro:IPR011539","Wikipedia:Rel_homology_domain"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"Rel homology domain binding","synonyms":[{"name":"RHD binding","type":"exact"}],"termid":"GO:0044197"}


id: GO:0032323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lipoate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid catabolic process","termid":"GO:0009062"},{"relation_name":"is_a","term_name":"lipoate metabolic process","termid":"GO:0009106"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"lipoate catabolic process","synonyms":[{"name":"lipoic acid breakdown","type":"exact"},{"name":"lipoic acid catabolism","type":"exact"},{"name":"lipoic acid degradation","type":"exact"}],"termid":"GO:0032323"}


id: PBO:0042725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein C","termid":"PBO:0042725"}


id: MONDO:0020618
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete blood group--private systems (obsolete MONDO:0020618)","secondary_identifiers":["OMIM:111500"],"synonyms":[{"name":"BLOOD GROUP--PRIVATE SYSTEMS","type":"related"},{"name":"antigenic Determinants of Low Frequency in the Population","type":"related"}],"termid":"MONDO:0020618","xrefs":{"Monarch":{"xref_id":"0020618"}}}


id: FYPO:0007037
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to phenylglyoxal. Cells stop growing (and may die) at a concentration of phenylglyoxal that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0002683","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to phenylglyoxal","synonyms":[{"name":"hypersensitive to phenylglyoxal","type":"exact"},{"name":"sensitive to 2-oxo-2-phenylacetaldehyde","type":"exact"},{"name":"sensitive to phenylglyoxal during mitotic cell cycle","type":"related"},{"name":"sensitive to phenylglyoxal during vegetative growth","type":"exact"}],"termid":"FYPO:0007037"}


id: PBO:0042235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin Y like 7 (pseudogene)","termid":"PBO:0042235"}


id: PBO:0032707
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_error-prone_translesion_synthesis_of_pyrimidine-pyrimidone_6-4_photoproducts","termid":"PBO:0032707"}


id: PBO:0049290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase alpha 9, pseudogene","termid":"PBO:0049290"}


id: MONDO:0033365
data:
  {"annotated_genes":["SJAG_02576","SJAG_02266"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87037,87038],"is_not":false,"summary":null,"term":"MONDO:0033365"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"genetic developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02266":null,"SJAG_02576":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 56","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080282","MEDGEN:1621755","UMLS:C4540034","OMIM:617665"],"synonyms":[{"name":"DEE56","type":"exact"},{"name":"EIEE56","type":"exact"},{"name":"developmental and epileptic encephalopathy 56","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 56","type":"exact"},{"name":"infantile epileptic encephalopathy 56","type":"exact"}],"termid":"MONDO:0033365","terms_by_termid":{"MONDO:0033365":null},"xrefs":{"Monarch":{"xref_id":"0033365"}}}


id: MONDO:0020236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Partial or complete displacement of the crystalline lens from its normal position in the eye.","definition_xrefs":["NCIT:C125484"],"gene_count":0,"genotype_count":0,"name":"obsolete lens position anomaly (obsolete MONDO:0020236)","secondary_identifiers":["Orphanet:98653","HP:0001083"],"synonyms":[{"name":"ectopia lentis","type":"exact"}],"termid":"MONDO:0020236","xrefs":{"Monarch":{"xref_id":"0020236"}}}


id: GO:0007530
data:
  {"annotated_genes":["SJAG_05153","SJAG_06638","SJAG_00757","SJAG_02556","SJAG_00769","SJAG_00073","SJAG_01601","SJAG_01419","SJAG_02460","SJAG_05239","SJAG_02401","SJAG_00293","SJAG_01068","SJAG_02319","SJAG_03097","SJAG_01677","SJAG_03221","SJAG_02079","SJAG_00320","SJAG_02226","SJAG_02724","SJAG_01465","SJAG_01113","SJAG_02828","SJAG_00247","SJAG_00399","SJAG_01410","SJAG_03997","SJAG_03006","SJAG_01076","SJAG_01495"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100931,89745,93050,120723,118068,118708,118396,95200],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007535"},{"annotations":[110351,90980,100932,118661,99233,89746,102399,120642,108465,97993,112670,91107,107899,116882,112147],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007534"},{"annotations":[108883,120971,120972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007531"},{"annotations":[94490,98463,100870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007533"},{"annotations":[110352,95891,104777,61316],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071515"},{"annotations":[95165],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071171"}]},"cv_name":"biological_process","definition":"Any process that establishes and transmits the specification of sexual status of an individual organism.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00073":null,"SJAG_00247":null,"SJAG_00293":null,"SJAG_00320":null,"SJAG_00399":null,"SJAG_00757":null,"SJAG_00769":null,"SJAG_01068":null,"SJAG_01076":null,"SJAG_01113":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01465":null,"SJAG_01495":null,"SJAG_01601":null,"SJAG_01677":null,"SJAG_02079":null,"SJAG_02226":null,"SJAG_02319":null,"SJAG_02401":null,"SJAG_02460":null,"SJAG_02556":null,"SJAG_02724":null,"SJAG_02828":null,"SJAG_03006":null,"SJAG_03097":null,"SJAG_03221":null,"SJAG_03997":null,"SJAG_05153":null,"SJAG_05239":null,"SJAG_06638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sex determination","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Wikipedia:Sex-determination_system"],"termid":"GO:0007530","terms_by_termid":{"GO:0007531":null,"GO:0007533":null,"GO:0007534":null,"GO:0007535":null,"GO:0071171":null,"GO:0071515":null}}


