# terms

id: GO:0044752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a human chorionic gonadotropin stimulus.","definition_xrefs":["PMID:21325635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to gonadotropin","termid":"GO:0034698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to human chorionic gonadotropin","synonyms":[{"name":"response to human chorionic gonadotropin stimulus","type":"exact"}],"termid":"GO:0044752"}


id: PBO:0064144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PBX/knotted 1 homeobox 1","termid":"PBO:0064144"}


id: PBO:0059482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrophage scavenger receptor 1","termid":"PBO:0059482"}


id: MOD:01726
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Proteome Sciences TMT6plex-126 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-126 reporter+balance reagent acylated residue","termid":"MOD:01720"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-126 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01726"}


id: MONDO:0012069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"keratoconus","termid":"MONDO:0015486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"keratoconus 3","secondary_identifiers":["MESH:C563900","OMIM:608586","UMLS:C1837809","MEDGEN:324883"],"synonyms":[{"name":"KTCN3","type":"exact"},{"name":"keratoconus 3","type":"exact"}],"termid":"MONDO:0012069","xrefs":{"Monarch":{"xref_id":"0012069"}}}


id: PBO:0034721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic and meiotic cohesin complex subunit Pds5","termid":"PBO:0034721"}


id: PBO:0047883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(5)(q15)","termid":"PBO:0047883"}


id: MONDO:0007017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Detachment of the vitreous humor from the retina.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitreous disorder","termid":"MONDO:0004860"},{"relation_name":"is_a","term_name":"inherited vitreoretinopathy","termid":"MONDO:0020246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"vitreous detachment","secondary_identifiers":["MEDGEN:140839","SCTID:53772007","DOID:9726","MESH:D020255","NCIT:C50807","MedDRA:10047650","EFO:1001238","UMLS:C0423361"],"synonyms":[{"name":"detachment Of vitreous","type":"exact"},{"name":"vitreous, detachment Of","type":"exact"}],"termid":"MONDO:0007017","xrefs":{"Monarch":{"xref_id":"0007017"}}}


id: PBO:0039689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APC down-regulated 1","termid":"PBO:0039689"}


id: PBO:0048734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate dehydrogenase 1 pseudogene 5","termid":"PBO:0048734"}


id: GO:0043649
data:
  {"annotated_genes":["SJAG_03434","SJAG_00937","SJAG_00714"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006533"},{"annotations":[93524,81367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006538"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dicarboxylic acids, any organic acid containing two carboxyl (-COOH) groups.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00714":null,"SJAG_00937":null,"SJAG_03434":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dicarboxylic acid catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"dicarboxylate catabolic process","type":"exact"},{"name":"dicarboxylate catabolism","type":"exact"},{"name":"dicarboxylic acid breakdown","type":"exact"},{"name":"dicarboxylic acid catabolism","type":"exact"},{"name":"dicarboxylic acid degradation","type":"exact"}],"termid":"GO:0043649","terms_by_termid":{"GO:0006533":null,"GO:0006538":null}}


id: PBO:0042651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y like 2","termid":"PBO:0042651"}


id: GO:0052081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts a salicylic acid-mediated signal transduction pathway in its host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:35698792","GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host signal transduction pathway","termid":"GO:0052027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host salicylic acid-mediated signal transduction pathway","secondary_identifiers":["GO:0052445"],"synonyms":[{"name":"modulation by organism of defense-related salicylic acid-mediated signal transduction pathway in other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by symbiont of defense-related host salicylic acid-mediated signal transduction pathway","type":"exact"},{"name":"modulation of defense-related host SA-mediated signal transduction pathway by organism","type":"exact"},{"name":"perturbation of defense-related host salicylic acid-mediated signal transduction pathway","type":"exact"}],"termid":"GO:0052081"}


id: FYPO:0006168
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to paraquat.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to paraquat","synonyms":[{"name":"normal protein phosphorylation during cellular response to paraquat during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to paraquat during vegetative growth","type":"exact"}],"termid":"FYPO:0006168"}


id: GO:0140425
data:
  {"annotated_genes":["SJAG_00057"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112495],"is_not":false,"summary":null,"term":"GO:0140425"}]},"cv_name":"biological_process","definition":"The directed movement of galactose from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:23254763","PMID:21621292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose transmembrane transport","termid":"GO:0015757"},{"relation_name":"is_a","term_name":"hexose import across plasma membrane","termid":"GO:0140271"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00057":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"galactose import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140425","terms_by_termid":{"GO:0140425":null}}


id: FYPO:0000903
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which microtubule depolymerization, i.e. the removal of tubulin dimers from a microtubule, occurs at a lower rate, or speed, than normal.","definition_xrefs":["GO:0007019","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal rate of microtubule depolymerization during vegetative growth","termid":"FYPO:0007954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000054"],"is_obsolete":false,"name":"decreased rate of microtubule depolymerization during vegetative growth","synonyms":[{"name":"decreased microtubule depolymerization rate during vegetative growth","type":"exact"},{"name":"decreased rate of microtubule catastrophe during vegetative growth","type":"related"},{"name":"decreased rate of microtubule depolymerisation during vegetative growth","type":"exact"},{"name":"decreased rate of microtubule depolymerization during mitotic cell cycle","type":"related"},{"name":"decreased rate of microtubule shrinkage during vegetative growth","type":"related"},{"name":"increased microtubule stability during vegetative growth","type":"related"},{"name":"reduced rate of microtubule depolymerization during vegetative growth","type":"exact"}],"termid":"FYPO:0000903"}


id: MONDO:0800178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Progressive, bilateral, and irreversible sensorineural hearing loss as a frequently encountered side effect of platinum-based chemotherapy such as cisplatin and carboplatin.","definition_xrefs":["PMID:32429551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensorineural hearing loss disorder","termid":"MONDO:0020678"},{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platinum-induced ototoxicity","synonyms":[{"name":"deafness, platinum-induced","type":"exact"},{"name":"platinum-related ototoxicity","type":"exact"}],"termid":"MONDO:0800178","xrefs":{"Monarch":{"xref_id":"0800178"}}}


id: GO:0033047
data:
  {"annotated_genes":["SJAG_03126","SJAG_01297","SJAG_01679","SJAG_04699","SJAG_02336","SJAG_03048","SJAG_03681","SJAG_04999","SJAG_04259","SJAG_04280","SJAG_01837","SJAG_04140","SJAG_02332","SJAG_01330","SJAG_04464","SJAG_05290","SJAG_04126","SJAG_04884","SJAG_00244","SJAG_02169","SJAG_00082","SJAG_04597","SJAG_01082","SJAG_03353","SJAG_00883","SJAG_00460","SJAG_02451","SJAG_01805"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101403,110092,105711,116129,113813,92534,115641,117760,109064],"is_not":false,"rel_names":["is_a","regulates","negatively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[116359,117418,101245,108148,111752,103616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[104182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902424"},{"annotations":[105100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000816"},{"annotations":[96009],"is_not":false,"rel_names":["regulates","negatively_regulates","is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[104190],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902845"},{"annotations":[107009,113814,117868],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902425"},{"annotations":[118536],"is_not":false,"rel_names":["is_a","regulates","positively_regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[113054,118539,91815,95618,104202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[96225,91816],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:1902846"},{"annotations":[113289],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110161"},{"annotations":[112869],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032888"},{"annotations":[116910],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110162"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sister chromatid segregation during mitosis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sister chromatid segregation","termid":"GO:0033045"},{"relation_name":"regulates","term_name":"mitotic sister chromatid segregation","termid":"GO:0000070"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00244":null,"SJAG_00460":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02332":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04140":null,"SJAG_04259":null,"SJAG_04280":null,"SJAG_04464":null,"SJAG_04597":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04999":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0000070","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic sister chromatid segregation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033047","terms_by_termid":{"GO:0007094":null,"GO:0032888":null,"GO:0090267":null,"GO:0110161":null,"GO:0110162":null,"GO:0140429":null,"GO:0140499":null,"GO:1902424":null,"GO:1902425":null,"GO:1902426":null,"GO:1902845":null,"GO:1902846":null,"GO:2000816":null}}


id: MONDO:0044794
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, circumscribed proliferation of melanocytes in the skin. Variants include the Spitz nevus, halo nevus, blue nevus, and balloon cell nevus.","definition_xrefs":["NCIT:C7571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"benign melanocytic skin nevus","secondary_identifiers":["UMLS:C1456781","MEDGEN:264151"],"synonyms":[{"name":"benign melanocytic nevus","type":"exact"},{"name":"benign melanocytic nevus of skin","type":"exact"},{"name":"benign melanocytic nevus of the skin","type":"exact"},{"name":"benign melanocytic skin nevus","type":"exact"},{"name":"benign mole","type":"exact"},{"name":"benign nevus of skin","type":"exact"},{"name":"benign nevus of the skin","type":"exact"},{"name":"benign skin nevus","type":"exact"}],"termid":"MONDO:0044794","xrefs":{"Monarch":{"xref_id":"0044794"}}}


id: PR:O13816
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psc3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cohesin subunit psc3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.20","synonyms":[{"name":"SCC3 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-psc3","type":"exact"}],"termid":"PR:O13816"}


id: MOD:00512
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, Hex3","definition_xrefs":["PubMed:1694179","RESID:AA0151#var","Unimod:144","PubMed:111247","PubMed:5490222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"Hex3 N4-glycosylated asparagine","synonyms":[{"name":"Hex(3)","type":"related"},{"name":"Hex3","type":"related"}],"termid":"MOD:00512"}


id: PBO:0029098
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_on_sulfate_sulfur_source","termid":"PBO:0029098"}


id: MONDO:0009717
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic neuromuscular disease characterized by permanent myotonia, mask-like facies (with blepharospasm, narrow palpebral fissures, small mouth with pursed lips and puckered chin) , and chondrodysplasia (variably manifesting with short stature, pectus carinatum, kyphoscoliosis, bowing of long bones, epiphyseal, metaphyseal, and hip dysplasia).","definition_xrefs":["Orphanet:800"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"progressive muscular dystrophy","termid":"MONDO:0016106"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of perlecan","termid":"MONDO:0016151"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0006025"],"is_obsolete":false,"name":"Schwartz-Jampel syndrome","secondary_identifiers":["ICD10CM:G71.13","NCIT:C35008","icd11.foundation:1725668060","NANDO:2200876","SCTID:29145002","NANDO:1200224","NANDO:2100235","ICD9:759.89","MEDGEN:19892","GARD:250","NORD:1697","UMLS:C0036391"],"synonyms":[{"name":"Aberfeld syndrome","type":"exact"},{"name":"Catel-Hempel syndrome","type":"exact"},{"name":"Catel-Hempel type dysostosis enchondralis metaepiphysaria","type":"exact"},{"name":"Osteochondromuscular dystrophy","type":"exact"},{"name":"SJS","type":"exact"},{"name":"Schwartz Jampel Aberfeld syndrome","type":"related"},{"name":"Schwartz Jampel Syndrome","type":"exact"},{"name":"Schwartz Jampel syndrome","type":"related"},{"name":"Schwartz-Jampel syndrome","type":"exact"},{"name":"Schwartz-Jampel-Aberfeld syndrome","type":"exact"},{"name":"burton skeletal dysplasia","type":"exact"},{"name":"burton syndrome","type":"exact"},{"name":"dysostosis enchondralis metaepiphysaria, Catel-Hempel type","type":"exact"},{"name":"myotonic chondrodystrophy","type":"exact"},{"name":"myotonic myopathy dwarfism chondrodystrophy and ocular and facial abnormalities","type":"related"},{"name":"myotonic myopathy, dwarfism, chondrodystrophy, and ocular and Facial abnormalities","type":"related"},{"name":"myotonic myopathy, dwarfism, chondrodystrophy, ocular and facial anomalies","type":"exact"},{"name":"osteochondromuscular dystrophy","type":"exact"}],"termid":"MONDO:0009717","xrefs":{"Monarch":{"xref_id":"0009717"}}}


id: GO:0071445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to protein stimulus (obsolete GO:0071445)","synonyms":[{"name":"cellular response to protein stimulus","type":"exact"}],"termid":"GO:0071445"}


id: PBO:0014253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Insertional Suppressor of Sme2","termid":"PBO:0014253"}


id: PATO:0000508
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000508 relative sensitivity value (obsolete PATO:0000508)","termid":"PATO:0000508"}


id: MONDO:0002396
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, solitary, and partially cystic neoplasm arising from the kidney. It occurs in children and adults. Presenting symptoms include hematuria and polycythemia. It is characterized by the presence of epithelial nodules embedded in a stroma containing spindle cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney benign neoplasm","termid":"MONDO:0002513"},{"relation_name":"is_a","term_name":"fibroepithelial neoplasm","termid":"MONDO:0021045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrogenic adenofibroma","secondary_identifiers":["NCIT:C39812","ICDO:8965/0","DOID:2698","UMLS:C1266141","MEDGEN:220424"],"synonyms":[{"name":"metanephric adenofibroma","type":"exact"}],"termid":"MONDO:0002396","xrefs":{"Monarch":{"xref_id":"0002396"}}}


id: PBO:0045851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 41","termid":"PBO:0045851"}


id: FYPO:0005387
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of eukaryotic translation initiation factor 2B complex assembly is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-containing complex assembly","termid":"FYPO:0000447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased eukaryotic translation initiation factor 2B complex assembly","synonyms":[{"name":"decreased eIF-2B assembly","type":"exact"},{"name":"decreased eIF-2B formation","type":"exact"},{"name":"decreased eif2B assembly","type":"exact"},{"name":"decreased eukaryotic translation initiation factor 2B complex assembly during mitotic cell cycle","type":"related"},{"name":"decreased eukaryotic translation initiation factor 2B complex assembly during vegetative growth","type":"exact"},{"name":"reduced eukaryotic translation initiation factor 2B complex assembly","type":"exact"}],"termid":"FYPO:0005387"}


id: MOD:01785
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-(L-isoglutamyl)-L-threonine, using free L-glutamine and releasing ammonia.","definition_xrefs":["RESID:AA0536#THR","PubMed:8706862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acylated residue","termid":"MOD:00671"},{"relation_name":"is_a","term_name":"O-(L-isoglutamyl)-L-threonine","termid":"MOD:01979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(L-isoglutamyl)-L-threonine (active site intermediate)","synonyms":[{"name":"(2S)-2-amino-5-([(1S,2R)-1-amino-1-carboxypropan-2-yl]oxy)-5-oxopentanoic acid","type":"exact"},{"name":"(2S,3R)-2-amino-3-([(4S)-4-amino-4-carboxybutanoyl]oxy)-propanoic acid","type":"exact"},{"name":"5-(threon-O3-yl)glutamate","type":"exact"},{"name":"O(beta)-(gamma-glutamyl)threonine","type":"exact"},{"name":"O-(L-isoglutamyl)-L-threonine","type":"exact"},{"name":"O3-(isoglutamyl)threonine","type":"exact"}],"termid":"MOD:01785"}


id: GO:0070429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of the nucleotide-binding oligomerization domain containing 1 (NOD1) pathway.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0070425"},{"relation_name":"is_a","term_name":"regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway","termid":"GO:0070428"},{"relation_name":"negatively_regulates","term_name":"nucleotide-binding oligomerization domain containing 1 signaling pathway","termid":"GO:0070427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway","synonyms":[{"name":"negative regulation of NOD1 signaling pathway","type":"exact"},{"name":"negative regulation of nucleotide-binding oligomerization domain containing 1 signalling pathway","type":"exact"}],"termid":"GO:0070429"}


id: MONDO:1012072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dystrophic epidermolysis bullosa, non-human animal","termid":"MONDO:1011737"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystrophic epidermolysis bullosa, sheep","secondary_identifiers":["OMIA:000341-9940"],"termid":"MONDO:1012072","xrefs":{"Monarch":{"xref_id":"1012072"}}}


id: MONDO:0019915
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Maternal uniparental disomy of chromosome 14 is a rare chromosomal anomaly characterized by prenatal and postnatal growth retardation, hypotonia, motor delay, early puberty, obesity, short adult stature, small hands and feet, mild intellectual disability, and mild dysmorphic facial features (frontal bossing, short nose with wide nasal tip, micrognathia, high palate, short philtrum).","definition_xrefs":["Orphanet:96184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"motor developmental delay due to 14q32.2 paternally expressed gene defect","termid":"MONDO:0014541"},{"relation_name":"is_a","term_name":"chromosome 14 disorder","termid":"MONDO:0700021"},{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternal uniparental disomy of chromosome 14","secondary_identifiers":["icd11.foundation:171193570","MEDGEN:1841563","GARD:16848","UMLS:C5680248"],"synonyms":[{"name":"UPD(14)mat","type":"exact"},{"name":"maternal uniparental disomy of chromosome type 14","type":"exact"}],"termid":"MONDO:0019915","xrefs":{"Monarch":{"xref_id":"0019915"}}}


id: GO:0060095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glycinergic synaptic transmission in the presence of zinc. Glycinergic synaptic transmission is the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glycine.","definition_xrefs":["GOC:dms","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of synaptic transmission, glycinergic","termid":"GO:0060094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"zinc potentiation of synaptic transmission, glycinergic","synonyms":[{"name":"zinc potentiation of glycinergic synaptic transmission","type":"exact"}],"termid":"GO:0060095"}


id: MONDO:0005016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Progressive kidney disorder caused by vascular damage to the glomerular capillaries, in patients with diabetes mellitus. It is usually manifested with nephritic syndrome and glomerulosclerosis.","definition_xrefs":["NCIT:C84417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"},{"relation_name":"is_a","term_name":"chronic kidney disease","termid":"MONDO:0005300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005240"],"is_obsolete":false,"name":"diabetic kidney disease","secondary_identifiers":["icd11.foundation:615062102","ICD9:250.4","ICD9:583.81","MESH:D003928","SCTID:127013003","EFO:0000401","ICD9:250.40","MEDGEN:8352","SCTID:50620007","UMLS:C0011881"],"synonyms":[{"name":"DKD","type":"exact"},{"name":"diabetic nephropathy","type":"exact"},{"name":"type 1 diabetes nephropathy","type":"narrow"},{"name":"type 2 diabetes nephropathy","type":"narrow"}],"termid":"MONDO:0005016","xrefs":{"Monarch":{"xref_id":"0005016"}}}


id: GO:0033183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the addition of a ubiquitin group to a histone protein.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone ubiquitination (obsolete GO:0033183)","termid":"GO:0033183"}


id: PBO:0051342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2D-23 (pseudogene)","termid":"PBO:0051342"}


id: MONDO:0012851
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nephrolithiasis/osteoporosis, hypophosphatemic","termid":"MONDO:0000079"},{"relation_name":"is_a","term_name":"impaired renal function disease","termid":"MONDO:0001343"},{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0005497"],"is_obsolete":false,"name":"hypophosphatemic nephrolithiasis/osteoporosis 2","secondary_identifiers":["DOID:0080078","MEDGEN:394127","UMLS:C2676782","MESH:C567362","OMIM:612287","GARD:18347"],"synonyms":[{"name":"NPHLOP2","type":"related"},{"name":"hypophosphatemic nephrolithiasis/osteoporosis type 2","type":"exact"},{"name":"nephrolithiasis/osteoporosis, hypophosphatemic, 2","type":"related"},{"name":"nephrolithiasis/osteoporosis, hypophosphatemic, type 2","type":"exact"}],"termid":"MONDO:0012851","xrefs":{"Monarch":{"xref_id":"0012851"}}}


id: PBO:0024818
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Supressor of cut TWenty","termid":"PBO:0024818"}


id: PBO:0059614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 26","termid":"PBO:0059614"}


id: MONDO:0032710
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"genetic developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 72","secondary_identifiers":["DOID:0112208","OMIM:618374","UMLS:C5193063","MEDGEN:1681879"],"synonyms":[{"name":"DEE72","type":"exact"},{"name":"EIEE72","type":"exact"},{"name":"EPILEPTIC ENCEPHALOPATHY, EARLY INFANTILE, 72","type":"exact"},{"name":"developmental and epileptic encephalopathy 72","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 72","type":"exact"}],"termid":"MONDO:0032710","xrefs":{"Monarch":{"xref_id":"0032710"}}}


id: PR:P78953
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mid1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"division mal foutue 1 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.15","synonyms":[{"name":"Spom972h-mid1","type":"exact"}],"termid":"PR:P78953"}


id: PBO:0070659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 30","termid":"PBO:0070659"}


id: PBO:0060629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCKAP5 intronic transcript 1","termid":"PBO:0060629"}


id: MOD:00944
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["Unimod:477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-trimethylammoniumbutanoyl derivatized residue","termid":"MOD:00943"},{"relation_name":"is_a","term_name":"(2)H deuterium tagged reagent","termid":"MOD:01431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"d9-4-trimethylammoniumbutanoyl derivatized residue","synonyms":[{"name":"TMAB:2H(9)","type":"related"},{"name":"d9-4-trimethyllammoniumbutyryl-","type":"related"}],"termid":"MOD:00944"}


id: PBO:0120090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chromatin remodeler that regulates various aspects of transcription; acts in conjunction with Isw1b to regulate chromatin structure, maintain chromatin integrity during transcription elongation by RNAP II by preventing trans-histone exchange over coding regions; component of both SAGA and SLIK complexes; ATPase motor stimulates DNA unwrapping from nucleosomes; contains two chromodomains, a helicase domain and a DNA-binding domain; human ortholog CHD1 is a prostate cancer tumor suppressor","termid":"PBO:0120090"}


id: GO:0010211
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-acetyl-leucine + H2O = indole-3-acetate + L-leucine.","definition_xrefs":["MetaCyc:RXN-2982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IAA-amino acid conjugate hydrolase activity","termid":"GO:0010178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"IAA-Leu conjugate hydrolase activity","termid":"GO:0010211"}


id: MONDO:0008832
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A visceral heterotaxy characterized by complete atrioventricular septal defect with a common atrium and univentricular AV connection, total anomalous pulmonary drainage, and transposition or malposition of the great arteries and may be associated with bilateral trilobed lungs, midline liver, asplenia and situs inversus affecting other organs that has material basis in homozygous mutation in the GDF1 gene on chromosome 19p12.","definition_xrefs":["PMID:14648004","DOID:0060856","PMID:20413652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visceral heterotaxy","termid":"MONDO:0018677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"right atrial isomerism","secondary_identifiers":["UMLS:C3178806","NORD:1305","OMIM:208530","Orphanet:97548","GARD:6795","MedDRA:10068335","MEDGEN:465274","HP:0011536"],"synonyms":[{"name":"Ivemark Syndrome","type":"exact"},{"name":"Ivemark syndrome","type":"exact"},{"name":"Polyasplenia","type":"related"},{"name":"RAI","type":"related"},{"name":"Vah, autosomal recessive","type":"related"},{"name":"asplenia syndrome","type":"related"},{"name":"asplenia with cardiovascular anomalies","type":"exact"},{"name":"bilateral right-sidedness sequence","type":"related"},{"name":"heterotaxy, Visceroatrial, autosomal recessive","type":"related"},{"name":"polysplenia syndrome","type":"related"},{"name":"right atrial isomerism","type":"exact"},{"name":"right atrial isomerism (disease)","type":"exact"},{"name":"right atrial isomerism (ivemark)","type":"exact"},{"name":"right isomerism","type":"related"},{"name":"splenic agenesis syndrome","type":"related"}],"termid":"MONDO:0008832","xrefs":{"Monarch":{"xref_id":"0008832"}}}


id: PBO:0062371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily A member 10","termid":"PBO:0062371"}


id: GO:0032614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-11 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-11 production","secondary_identifiers":["GO:0072609","GO:0042230"],"synonyms":[{"name":"IL-11 production","type":"exact"},{"name":"interleukin-11 biosynthetic process","type":"narrow"},{"name":"interleukin-11 secretion","type":"narrow"}],"termid":"GO:0032614"}


id: GO:0021714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the inferior olivary nucleus is generated and organized. The inferior olivary nucleus is a capsule-shaped structure in the ventral medulla located just lateral and dorsal to the medullary pyramids. Neurons in the inferior olivary nucleus are the source of climbing fiber input to the cerebellar cortex; these neurons have been implicated in various functions, such as learning and timing of movements.","definition_xrefs":["GOC:cls","ISBN:0838580343","GO_REF:0000021","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"medulla oblongata morphogenesis","termid":"GO:0021579"},{"relation_name":"part_of","term_name":"inferior olivary nucleus development","termid":"GO:0021713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inferior olivary nucleus morphogenesis","synonyms":[{"name":"inferior olive morphogenesis","type":"related"}],"termid":"GO:0021714"}


id: MONDO:0010646
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"hereditary macular dystrophy","termid":"MONDO:0020242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"macular dystrophy, X-linked","secondary_identifiers":["OMIM:309100","MESH:C564110","MEDGEN:374323","UMLS:C1839842"],"synonyms":[{"name":"macular dystrophy, X-linked","type":"exact"}],"termid":"MONDO:0010646","xrefs":{"Monarch":{"xref_id":"0010646"}}}


id: GO:0120127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of zinc ion.","definition_xrefs":["GOC:sl","PMID:24024381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion starvation","termid":"GO:0180055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to zinc ion starvation","termid":"GO:0120127"}


id: GO:0046348
data:
  {"annotated_genes":["SJAG_00620"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006032"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any amino sugar, sugars containing an amino group in place of a hydroxyl group.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino sugar metabolic process","termid":"GO:0006040"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00620":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amino sugar catabolic process","references_by_uniquename":{"GO_REF:0000043":null},"synonyms":[{"name":"amino sugar breakdown","type":"exact"},{"name":"amino sugar catabolism","type":"exact"},{"name":"amino sugar degradation","type":"exact"},{"name":"aminosaccharide catabolic process","type":"exact"},{"name":"aminosaccharide catabolism","type":"exact"}],"termid":"GO:0046348","terms_by_termid":{"GO:0006032":null}}


id: PBO:0066867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 167","termid":"PBO:0066867"}


id: GO:0033106
data:
  {"annotated_genes":["SJAG_01415","SJAG_03953","SJAG_03690","SJAG_02168"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[80654,92543,97541,119373],"is_not":false,"summary":null,"term":"GO:0033106"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding any of the compartments that make up the cis-Golgi network.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"cis-Golgi network","termid":"GO:0005801"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01415":null,"SJAG_02168":null,"SJAG_03690":null,"SJAG_03953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005794"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005794"],"is_obsolete":false,"name":"cis-Golgi network membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Golgi cis face membrane","type":"related"},{"name":"cis Golgi network membrane","type":"exact"}],"termid":"GO:0033106","terms_by_termid":{"GO:0033106":null}}


id: PBO:0042699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUGBP Elav-like family member 1","termid":"PBO:0042699"}


id: GO:0021648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the vestibulocochlear nerve is generated and organized. This sensory nerve innervates the membranous labyrinth of the inner ear. The vestibular branch innervates the vestibular apparatus that senses head position changes relative to gravity. The auditory branch innervates the cochlear duct, which is connected to the three bony ossicles which transduce sound waves into fluid movement in the cochlea.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:dph","GOC:jid","ISBN:0838580343","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"vestibulocochlear nerve development","termid":"GO:0021562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vestibulocochlear nerve morphogenesis","synonyms":[{"name":"CN VIII morphogenesis","type":"related"}],"termid":"GO:0021648"}


id: FYPO:0002252
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains a single septum, has one nucleus, is elongated, and is inviable. The septum is in an abnormal location, and the nucleus is located in one compartment of the septated cell. The cell compartment containing the nucleus is swollen (i.e. has a larger diameter and volume than the other compartment).","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"has_part","term_name":"normal septum location","termid":"FYPO:0002253"},{"relation_name":"is_a","term_name":"inviable elongated mononucleate monoseptate vegetative cell","termid":"FYPO:0001917"},{"relation_name":"is_a","term_name":"inviable swollen mononucleate monoseptate vegetative cell","termid":"FYPO:0002103"},{"relation_name":"is_a","term_name":"normal septum location","termid":"FYPO:0002253"},{"relation_name":"is_a","term_name":"inviable swollen elongated septated vegetative cell","termid":"FYPO:0002845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"output_of","termid":"FYPO:0000337"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0000004","FYPO:0001985","FYPO:0000641","FYPO:0000005","FYPO:0000337","FYPO:0001320"],"is_obsolete":false,"name":"inviable swollen elongated mononucleate vegetative cell with normally localized septum","synonyms":[{"name":"inviable elongated mononucleate vegetative cell with normally localized septum with increased cell volume","type":"exact"},{"name":"inviable enlarged elongated mononucleate vegetative cell with normally localized septum","type":"related"},{"name":"inviable large elongated mononucleate vegetative cell with normally localized septum","type":"related"},{"name":"inviable swollen elongated mononucleate vegetative cell with normally localised septum","type":"exact"},{"name":"inviable swollen elongated mononucleate vegetative cell with normally localized septum during mitotic cell cycle","type":"related"},{"name":"inviable swollen elongated mononucleate vegetative cell with normally positioned septum","type":"exact"},{"name":"lethal; swollen elongated mononucleate vegetative cell with normally localized septum","type":"exact"},{"name":"long swollen mononucleate cell with normally localized septum","type":"exact"},{"name":"swollen elongated mononucleate cell with normal septum position","type":"narrow"},{"name":"swollen elongated mononucleate cell with normally localized septum near new end during vegetative growth","type":"exact"},{"name":"swollen elongated mononucleate cell with normally placed septum","type":"exact"}],"termid":"FYPO:0002252"}


id: PBO:0072743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein A7A","termid":"PBO:0072743"}


id: PBO:0045685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain LC8-type 1 pseudogene 5","termid":"PBO:0045685"}


id: PBO:0071155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 20","termid":"PBO:0071155"}


id: GO:2001042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the process of physically separating the septal cell wall material by enzymatic digestion, that occurs after daughter cells are separated by cytokinesis.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of septum digestion after cytokinesis","termid":"GO:0010590"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"negatively_regulates","term_name":"septum digestion after cytokinesis","termid":"GO:0000920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of septum digestion after cytokinesis","synonyms":[{"name":"negative regulation of cytokinetic cell separation","type":"exact"}],"termid":"GO:2001042"}


id: PBO:0000316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberin","termid":"PBO:0000316"}


id: PBO:0085510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S12, no bacterial homolog","termid":"PBO:0085510"}


id: PBO:0051551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 9 receptor pseudogene 1","termid":"PBO:0051551"}


id: FYPO:0005450
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing okadaic acid.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002057","FYPO:0002060","FYPO:0002058","FYPO:0000003","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on okadaic acid","synonyms":[{"name":"normal cell population growth in presence of okadaic acid","type":"exact"},{"name":"normal cell population growth on okadaic acid","type":"exact"},{"name":"normal cellular response to okadaic acid","type":"related"},{"name":"normal vegetative cell population growth on okadaic acid","type":"exact"}],"termid":"FYPO:0005450"}


id: GO:0160092
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-containing complex involved in hemoglobin degradation and detoxification of heme in the food vacuole during the asexual blood stage of a Plasmodium. It is composed of at least falcipains FP2A and/or FP2B, plasmepsins PMII, PMIII/HAP and PMIV, heme detoxifying protein HDP and falcilysin FLN.","definition_xrefs":["PMID:23471987"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"hemozoin formation complex","termid":"GO:0160092"}


id: SO:0002046
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A FRE is an enhancer element necessary and sufficient to confer filamentation associated expression in S. cerevisiae.","definition_xrefs":["SO:ke","PMID:1489142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enhancer_binding_site","termid":"SO:0001461"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRE","synonyms":[{"name":"filamentation and invasion response element","type":"exact"}],"termid":"SO:0002046"}


id: MONDO:1012258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spinal dysplasia, non-human animal","termid":"MONDO:1011953"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal dysplasia, domestic cat","secondary_identifiers":["OMIA:000937-9685"],"termid":"MONDO:1012258","xrefs":{"Monarch":{"xref_id":"1012258"}}}


id: GO:1904294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ERAD pathway.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of proteasomal protein catabolic process","termid":"GO:1901800"},{"relation_name":"is_a","term_name":"regulation of ERAD pathway","termid":"GO:1904292"},{"relation_name":"is_a","term_name":"positive regulation of response to endoplasmic reticulum stress","termid":"GO:1905898"},{"relation_name":"positively_regulates","term_name":"ERAD pathway","termid":"GO:0036503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0030163"},{"rel_name":"regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"positive regulation of ERAD pathway","synonyms":[{"name":"activation of ER-associated degradation pathway","type":"related"},{"name":"activation of ERAD pathway","type":"narrow"},{"name":"activation of endoplasmic reticulum-associated degradation","type":"narrow"},{"name":"activation of endoplasmic reticulum-associated protein degradation pathway","type":"related"},{"name":"positive regulation of ER-associated degradation pathway","type":"related"},{"name":"positive regulation of endoplasmic reticulum-associated degradation","type":"exact"},{"name":"positive regulation of endoplasmic reticulum-associated protein degradation pathway","type":"related"},{"name":"up regulation of ER-associated degradation pathway","type":"related"},{"name":"up regulation of ERAD pathway","type":"exact"},{"name":"up regulation of endoplasmic reticulum-associated degradation","type":"exact"},{"name":"up regulation of endoplasmic reticulum-associated protein degradation pathway","type":"related"},{"name":"up-regulation of ER-associated degradation pathway","type":"related"},{"name":"up-regulation of ERAD pathway","type":"exact"},{"name":"up-regulation of endoplasmic reticulum-associated degradation","type":"exact"},{"name":"up-regulation of endoplasmic reticulum-associated protein degradation pathway","type":"related"},{"name":"upregulation of ER-associated degradation pathway","type":"related"},{"name":"upregulation of ERAD pathway","type":"exact"},{"name":"upregulation of endoplasmic reticulum-associated degradation","type":"exact"},{"name":"upregulation of endoplasmic reticulum-associated protein degradation pathway","type":"related"}],"termid":"GO:1904294"}


id: PBO:0062868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU deubiquitinase 5","termid":"PBO:0062868"}


id: MONDO:0003612
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm that affects the uterine ligament.","definition_xrefs":["NCIT:C126498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system cancer","termid":"MONDO:0000637"},{"relation_name":"is_a","term_name":"cervical cancer","termid":"MONDO:0002974"},{"relation_name":"is_a","term_name":"uterine ligament neoplasm","termid":"MONDO:0021629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine ligament cancer","secondary_identifiers":["DOID:5727","UMLS:C0864950","MEDGEN:923070"],"synonyms":[{"name":"cancer of uterine ligament","type":"exact"},{"name":"malignant neoplasm of uterine ligament","type":"exact"},{"name":"malignant uterine ligament neoplasm","type":"exact"},{"name":"tumour of the uterine ligament","type":"related"},{"name":"uterine ligament cancer","type":"exact"}],"termid":"MONDO:0003612","xrefs":{"Monarch":{"xref_id":"0003612"}}}


id: MONDO:0011864
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"common variable immunodeficiency","termid":"MONDO:0015517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"immunodeficiency, common variable, 1","secondary_identifiers":["OMIM:607594","DOID:0081144","MEDGEN:460728","UMLS:C3149378"],"synonyms":[{"name":"CVID1","type":"related"},{"name":"antibody deficiency due to Icos defect","type":"related"},{"name":"immunodeficiency, common variable","type":"related"},{"name":"immunodeficiency, common variable, 1","type":"exact"},{"name":"immunodeficiency, common variable, type 1","type":"exact"}],"termid":"MONDO:0011864","xrefs":{"Monarch":{"xref_id":"0011864"}}}


id: FYPO:0000397
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the duration of progression through the G1/S transition of the mitotic cell cycle is shorter than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased duration of mitotic G1/S phase transition (obsolete FYPO:0000397)","synonyms":[{"name":"cell cycle progression through the G1/S phase transition: increased rate","type":"related"},{"name":"decreased duration of cell cycle progression through mitotic G1/S phase transition","type":"exact"},{"name":"decreased duration of mitotic G1/S phase transition during vegetative growth","type":"exact"},{"name":"increased rate of cell cycle progression through mitotic G1/S phase transition","type":"related"},{"name":"reduced duration of mitotic G1/S phase transition","type":"exact"}],"termid":"FYPO:0000397"}


id: FYPO:0007618
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which the export of protein from the nucleus begins later than normal. Export of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein export from nucleus during vegetative growth","termid":"FYPO:0000345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"delayed onset of protein export from nucleus","synonyms":[{"name":"delayed onset of protein export from nucleus during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein export from nucleus during vegetative growth","type":"exact"},{"name":"delayed protein export from nucleus","type":"exact"}],"termid":"FYPO:0007618"}


id: PBO:0055280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2707","termid":"PBO:0055280"}


id: PBO:0043808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase N subunit 2","termid":"PBO:0043808"}


id: MONDO:0004669
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm that affects the major or minor salivary glands. Representative examples include carcinoma, lymphoma, and sarcoma.","definition_xrefs":["NCIT:C3811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oral cavity cancer","termid":"MONDO:0005515"},{"relation_name":"is_a","term_name":"head and neck cancer","termid":"MONDO:0005627"},{"relation_name":"is_a","term_name":"tumor of salivary gland","termid":"MONDO:0021357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"salivary gland cancer","secondary_identifiers":["MEDGEN:65079","MESH:D012468","DOID:8850","ICD9:142.8","SCTID:255072001","UMLS:C0220636","ICD10CM:C08"],"synonyms":[{"name":"cancer of saliva-secreting gland","type":"exact"},{"name":"cancer of salivary gland","type":"exact"},{"name":"cancer of the salivary gland","type":"exact"},{"name":"malignant neoplasm of major salivary gland","type":"narrow"},{"name":"malignant neoplasm of saliva-secreting gland","type":"exact"},{"name":"malignant neoplasm of salivary gland","type":"exact"},{"name":"malignant neoplasm of salivary gland duct","type":"exact"},{"name":"malignant neoplasm of the salivary gland","type":"exact"},{"name":"malignant saliva-secreting gland neoplasm","type":"exact"},{"name":"malignant salivary gland neoplasm","type":"exact"},{"name":"malignant salivary gland tumor","type":"exact"},{"name":"malignant salivary gland tumour","type":"exact"},{"name":"malignant tumor of salivary gland","type":"exact"},{"name":"malignant tumor of the salivary gland","type":"exact"},{"name":"malignant tumour of salivary gland","type":"exact"},{"name":"malignant tumour of the major salivary gland","type":"narrow"},{"name":"malignant tumour of the salivary gland","type":"exact"},{"name":"saliva-secreting gland cancer","type":"exact"},{"name":"salivary gland cancer","type":"exact"}],"termid":"MONDO:0004669","xrefs":{"Monarch":{"xref_id":"0004669"}}}


id: PBO:0056159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MACROD2 intronic transcript 1","termid":"PBO:0056159"}


id: PR:Q92363
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein FAM32A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C31G5.21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.21","secondary_identifiers":["UniProtKB:Q92363"],"synonyms":[{"name":"Spom972h-FAM32A","type":"exact"}],"termid":"PR:Q92363"}


id: PBO:0003178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Exo70 (predicted)","termid":"PBO:0003178"}


id: MONDO:1040032
data:
  {"annotated_genes":["SJAG_03758"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030979"}]},"cv_name":"mondo","definition":"A human mesomelic and rhizo-mesomelic dysplasia characterized by marked mesomelic shortening of the lower limbs, cutaneous syndactyly and nail abnormalities (placed on the palmar side of the finger, dysplastic or absent) in hands and feet due mutations in EN1 gene. Other clinical features may include genitourinary abnormalities (including bilateral cryptorchidism, vesicoureteral reflux, hydronephrosis, hypoplastic labia majora), spasticity and seizures.","definition_xrefs":["Orphanet:611223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03758":null},"genotype_count":0,"is_obsolete":false,"name":"EN1-related dorsoventral syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1843345","UMLS:C5680225"],"synonyms":[{"name":"ENDOVE syndrome","type":"exact"},{"name":"ENDOVES","type":"exact"}],"termid":"MONDO:1040032","terms_by_termid":{"MONDO:0030979":null},"xrefs":{"Monarch":{"xref_id":"1040032"}}}


id: PBO:0086493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative phosphatidylinositol/phosphatidylcholine transfer protein; possibly involved in lipid metabolism; localizes to the nucleus; contains a CRAL/TRIO domain and binds several lipids in a large-scale study; YKL091C has a paralog, SEC14, that arose from the whole genome duplication","termid":"PBO:0086493"}


id: PBO:0029864
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cortical_patch_localization_during_mitosis","termid":"PBO:0029864"}


id: PBO:0090428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTREC (exosome adaptor) complex RNA-binding subunit Rmn1","termid":"PBO:0090428"}


id: PBO:0074990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-1","termid":"PBO:0074990"}


id: GO:0045051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of protein insertion into the endoplasmic reticulum (ER) membrane in which signal anchor sequences function as both ER signal sequences and membrane anchor sequences.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein insertion into ER membrane","termid":"GO:0045048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"protein insertion into ER membrane by internal uncleaved signal-anchor sequence","synonyms":[{"name":"internal uncleaved signal-anchor sequence mediated protein insertion into ER membrane","type":"exact"},{"name":"protein insertion into ER membrane, internal uncleaved signal-anchor sequence mediated","type":"exact"},{"name":"protein insertion into endoplasmic reticulum membrane by internal uncleaved signal-anchor sequence","type":"exact"},{"name":"protein-ER insertion by internal uncleaved signal-anchor sequence","type":"exact"},{"name":"protein-endoplasmic reticulum insertion by internal uncleaved signal-anchor sequence","type":"exact"}],"termid":"GO:0045051"}


id: GO:1902951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of dendritic spine maintenance.","definition_xrefs":["GOC:sjp","GOC:TermGenie","PMID:24328732","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell projection organization","termid":"GO:0031345"},{"relation_name":"is_a","term_name":"regulation of dendritic spine maintenance","termid":"GO:1902950"},{"relation_name":"negatively_regulates","term_name":"dendritic spine maintenance","termid":"GO:0097062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dendritic spine maintenance","synonyms":[{"name":"down regulation of dendritic spine maintenance","type":"exact"},{"name":"down-regulation of dendritic spine maintenance","type":"exact"},{"name":"downregulation of dendritic spine maintenance","type":"exact"},{"name":"inhibition of dendritic spine maintenance","type":"narrow"}],"termid":"GO:1902951"}


id: PBO:0077187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toll like receptor 10","termid":"PBO:0077187"}


id: PBO:0053148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A pseudogene 4","termid":"PBO:0053148"}


id: GO:0010728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of hydrogen peroxide biosynthesis. The chemical reactions and pathways resulting in the formation of hydrogen peroxide (H2O2), a potentially harmful byproduct of aerobic cellular respiration which can cause damage to DNA.","definition_xrefs":["GOC:dph","GOC:hjd","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrogen peroxide metabolic process","termid":"GO:0010310"},{"relation_name":"is_a","term_name":"regulation of reactive oxygen species biosynthetic process","termid":"GO:1903426"},{"relation_name":"regulates","term_name":"hydrogen peroxide biosynthetic process","termid":"GO:0050665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hydrogen peroxide biosynthetic process","synonyms":[{"name":"regulation of hydrogen peroxide biosynthesis","type":"exact"}],"termid":"GO:0010728"}


id: PBO:0046081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A1 pseudogene 6","termid":"PBO:0046081"}


id: GO:0006158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete deoxyadenosine deaminase reaction (obsolete GO:0006158)","synonyms":[{"name":"deoxyadenosine deaminase reaction","type":"exact"}],"termid":"GO:0006158"}


id: PBO:0059780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 6","termid":"PBO:0059780"}


id: PBO:0044451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 30, pseudogene","termid":"PBO:0044451"}


id: PBO:0035822
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation_at_heterochromatin_island_during_vegetative_growth","termid":"PBO:0035822"}


id: SO:0001380
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_isopentenylaminomethyl_uridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_isopentenylaminomethyl_uridine","secondary_identifiers":["RNAMOD:103"],"synonyms":[{"name":"5-(isopentenylaminomethyl)uridine","type":"exact"},{"name":"five isopentenylaminomethyl uridine","type":"exact"},{"name":"inm5U","type":"exact"}],"termid":"SO:0001380"}


id: PBO:0003934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidinol dehydrogenase His2 (predicted)","termid":"PBO:0003934"}


id: MONDO:0009408
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperuricemia, infantile, with abnormal behavior and normal hypoxanthine guanine phosphoribosyltransferase","secondary_identifiers":["OMIM:240000","MESH:C565489","UMLS:C1855884","MEDGEN:383794"],"synonyms":[{"name":"hyperuricemia, infantile, with abnormal behavior and normal hypoxanthine guanine phosphoribosyltransferase","type":"exact"}],"termid":"MONDO:0009408","xrefs":{"Monarch":{"xref_id":"0009408"}}}


id: FYPO:0000931
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the microtubule cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule cytoskeleton","termid":"FYPO:0004090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization to microtubule cytoskeleton during vegetative growth","synonyms":[{"name":"abnormal protein localisation to microtubule cytoskeleton during vegetative growth","type":"exact"},{"name":"abnormal protein localization to microtubule cytoskeleton during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000931"}


id: PBO:0004372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fork head transcription factor Sep1","termid":"PBO:0004372"}


id: GO:1904511
data:
  {"annotated_genes":["SJAG_02695","SJAG_03052","SJAG_03540","SJAG_00723","SJAG_02761","SJAG_02336","SJAG_00140","SJAG_00113","SJAG_01196","SJAG_00851"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91433,98781,102183,104137,105699,115895,120527],"is_not":false,"summary":null,"term":"GO:1904511"},{"annotations":[105560,97017,99383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903754"}]},"cv_name":"cellular_component","definition":"Any microtubule plus-end that is part of a cytoplasmic microtubule.","definition_xrefs":["GO_REF:0000064","PMID:15772152","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule plus-end","termid":"GO:0035371"},{"relation_name":"part_of","term_name":"cytoplasmic microtubule","termid":"GO:0005881"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00723":null,"SJAG_00851":null,"SJAG_01196":null,"SJAG_02336":null,"SJAG_02695":null,"SJAG_02761":null,"SJAG_03052":null,"SJAG_03540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0015630","GO:0005575"],"is_obsolete":false,"name":"cytoplasmic microtubule plus-end","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"growing microtubule plus end of cytoplasmic microtubule","type":"exact"},{"name":"growing microtubule plus end of non-spindle-associated astral microtubule","type":"narrow"},{"name":"microtubule plus end of cytoplasmic microtubule","type":"exact"},{"name":"microtubule plus end of non-spindle-associated astral microtubule","type":"narrow"},{"name":"microtubule plus-end of cytoplasmic microtubule","type":"exact"},{"name":"microtubule plus-end of non-spindle-associated astral microtubule","type":"narrow"}],"termid":"GO:1904511","terms_by_termid":{"GO:1903754":null,"GO:1904511":null}}


id: PBO:0071614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 32","termid":"PBO:0071614"}


id: MONDO:0002914
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm that affects the brain stem and occurs during childhood.","definition_xrefs":["NCIT:C5969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brainstem cancer","termid":"MONDO:0002912"},{"relation_name":"is_a","term_name":"childhood infratentorial neoplasm","termid":"MONDO:0002915"},{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood brain stem neoplasm","secondary_identifiers":["DOID:4206","MEDGEN:272459","UMLS:C1332951"],"synonyms":[{"name":"brain stem neoplasm","type":"exact"},{"name":"brainstem cancer of childhood","type":"exact"},{"name":"childhood brain stem neoplasm","type":"exact"},{"name":"childhood brain stem tumor","type":"exact"},{"name":"childhood brain stem tumour","type":"exact"},{"name":"childhood brainstem cancer","type":"exact"},{"name":"childhood brainstem neoplasm","type":"exact"},{"name":"childhood brainstem tumor","type":"exact"},{"name":"childhood brainstem tumour","type":"exact"},{"name":"childhood neoplasm of brain stem","type":"exact"},{"name":"childhood neoplasm of brainstem","type":"exact"},{"name":"childhood neoplasm of the brain stem","type":"exact"},{"name":"childhood neoplasm of the brainstem","type":"exact"},{"name":"childhood tumor of brain stem","type":"exact"},{"name":"childhood tumor of brainstem","type":"exact"},{"name":"childhood tumor of the brain stem","type":"exact"},{"name":"childhood tumor of the brainstem","type":"exact"},{"name":"childhood tumour of brain stem","type":"exact"},{"name":"childhood tumour of brainstem","type":"exact"},{"name":"childhood tumour of the brain stem","type":"exact"},{"name":"childhood tumour of the brainstem","type":"exact"},{"name":"paediatric brain stem neoplasm","type":"exact"},{"name":"paediatric brain stem tumour","type":"exact"},{"name":"paediatric brainstem cancer","type":"exact"},{"name":"paediatric brainstem neoplasm","type":"exact"},{"name":"paediatric brainstem tumour","type":"exact"},{"name":"paediatric neoplasm of brain stem","type":"exact"},{"name":"paediatric neoplasm of brainstem","type":"exact"},{"name":"paediatric neoplasm of the brain stem","type":"exact"},{"name":"paediatric neoplasm of the brainstem","type":"exact"},{"name":"paediatric tumour of brain stem","type":"exact"},{"name":"paediatric tumour of brainstem","type":"exact"},{"name":"paediatric tumour of the brain stem","type":"exact"},{"name":"paediatric tumour of the brainstem","type":"exact"},{"name":"pediatric brain stem neoplasm","type":"exact"},{"name":"pediatric brain stem tumor","type":"exact"},{"name":"pediatric brainstem cancer","type":"exact"},{"name":"pediatric brainstem neoplasm","type":"exact"},{"name":"pediatric brainstem tumor","type":"exact"},{"name":"pediatric neoplasm of brain stem","type":"exact"},{"name":"pediatric neoplasm of brainstem","type":"exact"},{"name":"pediatric neoplasm of the brain stem","type":"exact"},{"name":"pediatric neoplasm of the brainstem","type":"exact"},{"name":"pediatric tumor of brain stem","type":"exact"},{"name":"pediatric tumor of brainstem","type":"exact"},{"name":"pediatric tumor of the brain stem","type":"exact"},{"name":"pediatric tumor of the brainstem","type":"exact"}],"termid":"MONDO:0002914","xrefs":{"Monarch":{"xref_id":"0002914"}}}


id: GO:0010623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The activation of endogenous cellular processes that result in the death of a cell as part of its development.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"},{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"},{"relation_name":"part_of","term_name":"cell development","termid":"GO:0048468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"programmed cell death involved in cell development","synonyms":[{"name":"developmental programmed cell death","type":"broad"},{"name":"programmed cell death involved in development","type":"broad"}],"termid":"GO:0010623"}


id: GO:0009443
data:
  {"annotated_genes":["SJAG_00707","SJAG_00252","SJAG_01383"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76971,79974],"is_not":false,"summary":null,"term":"GO:0009443"},{"annotations":[113676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"}]},"cv_name":"biological_process","definition":"Any process that generates pyridoxal 5'-phosphate, the active form of vitamin B6, from derivatives of it without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridoxal phosphate biosynthetic process","termid":"GO:0042823"},{"relation_name":"is_a","term_name":"metabolic compound salvage","termid":"GO:0043094"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00252":null,"SJAG_00707":null,"SJAG_01383":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0008150"],"is_obsolete":false,"name":"pyridoxal 5'-phosphate salvage","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PLPSAL-PWY"],"synonyms":[{"name":"pyridoxal 5' phosphate salvage","type":"exact"}],"termid":"GO:0009443","terms_by_termid":{"GO:0009443":null,"GO:0010144":null}}


id: MONDO:0019478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A nodular lymphocyte predominant Hodgkin lymphoma occurring in adults.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult lymphoma","termid":"MONDO:0003660"},{"relation_name":"is_a","term_name":"nodular lymphocyte predominant Hodgkin lymphoma","termid":"MONDO:0044778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"adult nodular lymphocyte predominant Hodgkin lymphoma","secondary_identifiers":["MEDGEN:231044","UMLS:C1332210","NCIT:C7942"],"synonyms":[{"name":"adult NLPHD","type":"exact"},{"name":"adult nodular lymphocyte predominant Hodgkin's disease","type":"exact"},{"name":"adult nodular lymphocyte predominant Hodgkin's lymphoma","type":"exact"},{"name":"nodular lymphocyte predominant Hodgkin lymphoma","type":"broad"}],"termid":"MONDO:0019478","xrefs":{"Monarch":{"xref_id":"0019478"}}}


id: GO:0019246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L(+)-lactate from other compounds, including pyruvate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate biosynthetic process from pyruvate","termid":"GO:0019244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"L(+)-lactate biosynthetic process from pyruvate","secondary_identifiers":["MetaCyc:PWY-5481"],"synonyms":[{"name":"L(+)-lactate anabolism from pyruvate","type":"exact"},{"name":"L(+)-lactate formation from pyruvate","type":"exact"},{"name":"L(+)-lactate synthesis from pyruvate","type":"exact"},{"name":"S-lactate biosynthetic process from pyruvate","type":"exact"}],"termid":"GO:0019246"}


id: FYPO:0006676
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a lower extent than normal during a cellular response to hydroxyurea. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription during vegetative growth","termid":"FYPO:0000781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000294","FYPO:0006551"],"is_obsolete":false,"name":"decreased transcription during cellular response to hydroxyurea","synonyms":[{"name":"decreased transcription during cellular response to HU","type":"exact"},{"name":"decreased transcription during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"decreased transcription during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"decreased transcription in response to HU","type":"exact"},{"name":"decreased transcription in response to hydroxyurea","type":"exact"},{"name":"reduced transcription during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0006676"}


id: MONDO:0019595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete 46,XY disorder of sex development due to adrenal and testicular steroidogenesis defect (obsolete MONDO:0019595)","secondary_identifiers":["Orphanet:90786"],"synonyms":[{"name":"46,XY DSD due to adrenal and testicular steroidogenesis defect","type":"exact"}],"termid":"MONDO:0019595","xrefs":{"Monarch":{"xref_id":"0019595"}}}


id: MONDO:0021484
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the maxillary sinus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system benign neoplasm","termid":"MONDO:0000382"},{"relation_name":"is_a","term_name":"bone benign neoplasm","termid":"MONDO:0000631"},{"relation_name":"is_a","term_name":"sensory organ benign neoplasm","termid":"MONDO:0000633"},{"relation_name":"is_a","term_name":"maxillary sinus neoplasm","termid":"MONDO:0006850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of maxillary sinus","secondary_identifiers":["MEDGEN:138024","NCIT:C4414","icd11.foundation:1738455612","ICD9:212.0","UMLS:C0345666","SCTID:92211008"],"synonyms":[{"name":"benign maxillary antrum neoplasm","type":"exact"},{"name":"benign maxillary antrum tumor","type":"exact"},{"name":"benign maxillary antrum tumour","type":"exact"},{"name":"benign maxillary sinus neoplasm","type":"exact"},{"name":"benign maxillary sinus tumor","type":"exact"},{"name":"benign maxillary sinus tumour","type":"exact"},{"name":"benign maxillofacial sinus neoplasm","type":"exact"},{"name":"benign maxillofacial sinus tumor","type":"exact"},{"name":"benign maxillofacial sinus tumour","type":"exact"},{"name":"benign neoplasm of maxillary antrum","type":"exact"},{"name":"benign neoplasm of maxillofacial sinus","type":"exact"},{"name":"benign neoplasm of the maxillary antrum","type":"exact"},{"name":"benign neoplasm of the maxillary sinus","type":"exact"},{"name":"benign neoplasm of the maxillofacial sinus","type":"exact"},{"name":"benign tumor of maxillary antrum","type":"exact"},{"name":"benign tumor of maxillary sinus","type":"exact"},{"name":"benign tumor of maxillofacial sinus","type":"exact"},{"name":"benign tumor of the maxillary antrum","type":"exact"},{"name":"benign tumor of the maxillary sinus","type":"exact"},{"name":"benign tumor of the maxillofacial sinus","type":"exact"},{"name":"benign tumour of maxillary antrum","type":"exact"},{"name":"benign tumour of maxillary sinus","type":"exact"},{"name":"benign tumour of maxillofacial sinus","type":"exact"},{"name":"benign tumour of the maxillary antrum","type":"exact"},{"name":"benign tumour of the maxillary sinus","type":"exact"},{"name":"benign tumour of the maxillofacial sinus","type":"exact"},{"name":"maxillary sinus benign neoplasm","type":"exact"}],"termid":"MONDO:0021484","xrefs":{"Monarch":{"xref_id":"0021484"}}}


id: GO:0045560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the TRAIL (TNF-related apoptosis inducing ligand) receptor.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of TRAIL receptor biosynthetic process (obsolete GO:0045560)","synonyms":[{"name":"regulation of TRAIL receptor anabolism","type":"exact"},{"name":"regulation of TRAIL receptor biosynthesis","type":"exact"},{"name":"regulation of TRAIL receptor formation","type":"exact"},{"name":"regulation of TRAIL receptor synthesis","type":"exact"}],"termid":"GO:0045560"}


id: GO:0090173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synaptonemal complex assembly. Synaptonemal complex assembly is the cell cycle process in which the synaptonemal complex, a structure that holds paired chromosomes together during prophase I of meiosis and that promotes genetic recombination, is formed.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of chromosome organization","termid":"GO:0033044"},{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"synaptonemal complex assembly","termid":"GO:0007130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of synaptonemal complex assembly","termid":"GO:0090173"}


id: PBO:0085538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S8, no bacterial homolog; RPS8B has a paralog, RPS8A, that arose from the whole genome duplication","termid":"PBO:0085538"}


id: PBO:0109659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing coactivator Pwi1","termid":"PBO:0109659"}


id: GO:0006672
data:
  {"annotated_genes":["SJAG_02842","SJAG_01057","SJAG_02305","SJAG_02085","SJAG_04550","SJAG_01219","SJAG_04178"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74836],"is_not":false,"summary":null,"term":"GO:0006672"},{"annotations":[79846,80662,110661,75900,78598,80825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046513"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving ceramides, any N-acylated sphingoid.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid metabolic process","termid":"GO:0006665"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01057":null,"SJAG_01219":null,"SJAG_02085":null,"SJAG_02305":null,"SJAG_02842":null,"SJAG_04178":null,"SJAG_04550":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"ceramide metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ceramide metabolism","type":"exact"}],"termid":"GO:0006672","terms_by_termid":{"GO:0006672":null,"GO:0046513":null}}


id: FYPO:0004972
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more actin cortical patches than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cortical patch","termid":"FYPO:0003987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"actin cortical patches present in increased numbers","synonyms":[{"name":"F-actin patches present in increased numbers","type":"exact"},{"name":"actin cortical patches present in greater numbers","type":"exact"},{"name":"actin cortical patches present in increased numbers during mitotic cell cycle","type":"related"},{"name":"actin cortical patches present in increased numbers during vegetative growth","type":"exact"},{"name":"actin patches present in increased numbers","type":"exact"},{"name":"increased actin cortical patch formation during vegetative growth","type":"related"},{"name":"more actin cortical patches present during vegetative growth","type":"exact"}],"termid":"FYPO:0004972"}


id: PBO:0057464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 583","termid":"PBO:0057464"}


id: GO:1902219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to osmotic stress.","definition_xrefs":["GOC:BHF","GOC:mtg_apoptosis","GOC:TermGenie","GOC:rl","PMID:14569084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway in response to osmotic stress","termid":"GO:1902218"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001243"},{"relation_name":"negatively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to osmotic stress","termid":"GO:0008627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of intrinsic apoptotic signaling pathway in response to osmotic stress","synonyms":[{"name":"down regulation of intrinsic apoptotic signaling pathway in response to osmotic stress","type":"exact"},{"name":"down-regulation of intrinsic apoptotic signaling pathway in response to osmotic stress","type":"exact"},{"name":"downregulation of intrinsic apoptotic signaling pathway in response to osmotic stress","type":"exact"},{"name":"inhibition of intrinsic apoptotic signaling pathway in response to osmotic stress","type":"narrow"}],"termid":"GO:1902219"}


id: GO:0007005
data:
  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id: MONDO:0009299
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  {"annotated_genes":["SJAG_04148","SJAG_03051","SJAG_04950"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030736"},{"annotations":[87420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013689"},{"annotations":[88185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054850"}]},"cv_name":"mondo","definition":"46,XX gonadal dysgenesis (46,XX GD) is a primary ovarian defect leading to premature ovarian failure (POF) in otherwise normal 46,XX females as a result of failure of the gonads to develop or due to resistance to gonadotrophin stimulation.","definition_xrefs":["Orphanet:243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonadal dysgenesis","termid":"MONDO:0001967"},{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03051":null,"SJAG_04148":null,"SJAG_04950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"46 XX gonadal dysgenesis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D023961","NANDO:2200384","UMLS:C0685837","GARD:5671","DOID:14450","icd11.foundation:1742528605","MEDGEN:146899","NCIT:C120197","OMIMPS:233300","SCTID:95198001"],"synonyms":[{"name":"46,XX complete gonadal dysgenesis","type":"exact"},{"name":"46,XX gonadal dysgenesis","type":"exact"},{"name":"46,XX ovarian dysgenesis","type":"exact"},{"name":"46,XX pure gonadal dysgenesis","type":"exact"},{"name":"FSH-RO","type":"exact"},{"name":"XX female gonadal dysgenesis","type":"exact"},{"name":"XX gonadal dysgenesis","type":"related"},{"name":"XX-GD","type":"exact"},{"name":"follicular stimulating hormone-resistant ovaries","type":"exact"},{"name":"hypergonadotropic ovarian dysgenesis","type":"exact"},{"name":"ovarian dysgenesis","type":"related"}],"termid":"MONDO:0009299","terms_by_termid":{"MONDO:0013689":null,"MONDO:0030736":null,"MONDO:0054850":null},"xrefs":{"Monarch":{"xref_id":"0009299"}}}


id: MONDO:0700012
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id: PBO:0075700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SREK1 interacting protein 1","termid":"PBO:0075700"}


id: PBO:0029090
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_bundle_formation","termid":"PBO:0029090"}


id: PBO:0026766
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_ferric-chelate_reductase_activity","termid":"PBO:0026766"}


id: GO:0031417
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  {"annotated_genes":["SJAG_06449","SJAG_04131","SJAG_03215"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[68428,74119,76984],"is_not":false,"summary":null,"term":"GO:0031417"}]},"cv_name":"cellular_component","definition":"A conserved complex that catalyzes the transfer of an acetyl group to the N-terminal residue of a protein acceptor molecule that has a Met-Ile, Met-Leu, Met-Trp, or Met-Phe N-terminus. In Saccharomyces the complex includes Mak3p, Mak10p, and Mak31p.","definition_xrefs":["PMID:12890471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein acetyltransferase complex","termid":"GO:0031414"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03215":null,"SJAG_04131":null,"SJAG_06449":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"NatC complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"N-terminal acetyltransferase C complex","type":"exact"}],"termid":"GO:0031417","terms_by_termid":{"GO:0031417":null}}


id: PBO:0003439
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase (predicted)","termid":"PBO:0003439"}


id: GO:0048797
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the swim bladder. This process pertains to the initial formation of a structure from unspecified parts. The swim bladder is used by some fishes to maintain buoyancy and may function in addition as a sound producing organ, a sound receptor, and a respiratory organ.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ formation","termid":"GO:0048645"},{"relation_name":"part_of","term_name":"swim bladder morphogenesis","termid":"GO:0048795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"swim bladder formation","synonyms":[{"name":"gas bladder biosynthesis","type":"exact"},{"name":"gas bladder formation","type":"exact"}],"termid":"GO:0048797"}


id: SO:0001689
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The restriction enzyme cleavage junction on the 5' strand of the nucleotide sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single_strand_restriction_enzyme_cleavage_site","termid":"SO:0001694"},{"relation_name":"part_of","term_name":"sticky_end_restriction_enzyme_cleavage_site","termid":"SO:0001692"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_restriction_enzyme_junction","synonyms":[{"name":"5' restriction enzyme junction","type":"exact"}],"termid":"SO:0001689"}


id: PBO:0059079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monoacylglycerol O-acyltransferase 2","termid":"PBO:0059079"}


id: MONDO:0024562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any sick sinus syndrome in which the cause of the disease is a mutation in the SCN5A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial sick sinus syndrome","termid":"MONDO:0012061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"sick sinus syndrome 1","secondary_identifiers":["UMLS:C1837845","MEDGEN:325270","OMIM:608567"],"synonyms":[{"name":"SCN5A sick sinus syndrome","type":"exact"},{"name":"SSS1","type":"related"},{"name":"sick sinus syndrome 1","type":"exact"},{"name":"sick sinus syndrome caused by mutation in SCN5A","type":"exact"},{"name":"sick sinus syndrome, congenital","type":"related"},{"name":"sinus bradycardia syndrome, familial","type":"related"},{"name":"sinus node disease, familial, autosomal recessive","type":"related"},{"name":"sinus rhythm, congenital absence of","type":"related"}],"termid":"MONDO:0024562","xrefs":{"Monarch":{"xref_id":"0024562"}}}


id: PR:Q9UUJ4
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rec24 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUJ4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rec24 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.15c","synonyms":[{"name":"Spom972h-rec24","type":"exact"},{"name":"meiotically up-regulated gene 6 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUJ4"}


id: PBO:0035753
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_deactivation_of_mitotic_spindle_assembly_checkpoint","termid":"PBO:0035753"}


id: PBO:0065131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKG2 antisense RNA 1","termid":"PBO:0065131"}


id: PBO:0111056
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 22 (non-protein coding)","termid":"PBO:0111056"}


id: MONDO:0003993
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of embryonal rhabdomyosarcoma occurring in female children. The neoplasm arises from the vagina. It is characterized by the formation of a cambium layer in the affected tissue and polypoid nodules with an abundant myxoid stroma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood botryoid rhabdomyosarcoma","termid":"MONDO:0003992"},{"relation_name":"is_a","term_name":"botryoid-type embryonal rhabdomyosarcoma of the vagina","termid":"MONDO:0003994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood vagina botryoid rhabdomyosarcoma","secondary_identifiers":["DOID:6787","MEDGEN:232055","UMLS:C1332945","NCIT:C35556"],"synonyms":[{"name":"botryoid-type embryonal rhabdomyosarcoma of the vagina of childhood","type":"exact"},{"name":"childhood botryoid-type embryonal rhabdomyosarcoma of the vagina","type":"exact"},{"name":"childhood sarcoma Botryoides of the vagina","type":"exact"},{"name":"paediatric botryoid-type embryonal rhabdomyosarcoma of the vagina","type":"exact"},{"name":"pediatric botryoid-type embryonal rhabdomyosarcoma of the vagina","type":"exact"},{"name":"vaginal childhood botryoid-type embryonal rhabdomyosarcoma","type":"exact"},{"name":"vaginal childhood sarcoma Botryoides","type":"exact"}],"termid":"MONDO:0003993","xrefs":{"Monarch":{"xref_id":"0003993"}}}


id: PBO:0066528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RANBP2 like and GRIP domain containing 4","termid":"PBO:0066528"}


id: GO:0090352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the uptake, from the environment, of nitrates, inorganic or organic salts and esters of nitric acid and the subsequent reduction of nitrate ion to other, less highly oxidized, inorganic nitrogenous substances.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of nitrogen cycle metabolic process","termid":"GO:1903314"},{"relation_name":"regulates","term_name":"nitrate assimilation","termid":"GO:0042128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0071941"}],"interesting_parent_ids":["GO:0071941","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of nitrate assimilation","termid":"GO:0090352"}


id: PBO:0081311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 92 pseudogene 1, Y-linked","termid":"PBO:0081311"}


id: GO:0004596
data:
  {"annotated_genes":["SJAG_02726","SJAG_04131","SJAG_04631","SJAG_01826","SJAG_03537"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[119855],"is_not":false,"summary":null,"term":"GO:0004596"},{"annotations":[117206,105401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120518"},{"annotations":[75773,79102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990189"},{"annotations":[91212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008999"},{"annotations":[79103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990190"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + an N-terminal L-alpha-aminoacyl-[protein] = CoA + H+ + N-terminal Nalpha-acetyl-L-alpha-aminoacyl-[protein].","definition_xrefs":["RHEA:21028","PMID:30054468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein N-acetyltransferase activity","termid":"GO:0034212"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01826":null,"SJAG_02726":null,"SJAG_03537":null,"SJAG_04131":null,"SJAG_04631":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0034212"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746","GO:0034212"],"is_obsolete":false,"name":"protein-N-terminal amino-acid acetyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6814090","EC:2.3.1.255"],"synonyms":[{"name":"N(alpha)-acetyltransferase activity","type":"related"},{"name":"NAT activity","type":"related"},{"name":"acetyl-CoA:peptide alpha-N-acetyltransferase activity","type":"exact"},{"name":"acetyl-CoA:peptide nalpha-acetyltransferase activity","type":"exact"},{"name":"amino-terminal amino acid-acetylating enzyme activity","type":"related"},{"name":"beta-endorphin acetyltransferase activity","type":"narrow"},{"name":"nalpha-acetyltransferase activity","type":"exact"},{"name":"peptide acetyltransferase activity","type":"related"},{"name":"peptide alpha-N-acetyltransferase activity","type":"exact"},{"name":"protein N-terminal acetyltransferase activity","type":"exact"}],"termid":"GO:0004596","terms_by_termid":{"GO:0004596":null,"GO:0008999":null,"GO:0120518":null,"GO:1990189":null,"GO:1990190":null}}


id: PBO:0090979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoric monoester hydrolase Ptf1","termid":"PBO:0090979"}


id: PBO:0034088
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_paramorphism_relationship_with","termid":"PBO:0034088"}


id: PBO:0067235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 306, pseudogene","termid":"PBO:0067235"}


id: FYPO:0004118
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that has one or more septa with normal size, shape, or structure, and that undergoes two or more rounds of cell division, and then dies.","definition_xrefs":["PomBase:mah","PMID:15116432"],"direct_ancestors":[{"relation_name":"has_part","term_name":"normal septum morphology","termid":"FYPO:0006213"},{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions","termid":"FYPO:0002430"},{"relation_name":"is_a","term_name":"normal septum morphology","termid":"FYPO:0006213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, normal septum morphology","synonyms":[{"name":"inviable following spore germination, multiple cell divisions, normal septum morphology","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, normal septum morphology","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, normal septum morphology","type":"exact"}],"termid":"FYPO:0004118"}


id: FYPO:0007206
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at abnormal replication fork arrest at sites within the eukaryotic rDNA repeat spacer does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork arrest at rDNA repeats","termid":"FYPO:0003089"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000293","FYPO:0001985"],"is_obsolete":false,"name":"abolished replication fork arrest at rDNA repeats","synonyms":[{"name":"abolished replication fork arrest at rDNA repeats during mitotic cell cycle","type":"related"},{"name":"abolished replication fork arrest at rDNA repeats during vegetative growth","type":"exact"},{"name":"abolished replication fork arrest at ribosomal DNA repeats","type":"exact"},{"name":"replication fork arrest at rDNA repeats abolished","type":"exact"}],"termid":"FYPO:0007206"}


id: PR:Q9UTH1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA guanosine-2'-O-methyltransferase TRM13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01162","PANTHER:PTHR12998:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA:m(4)X modification enzyme TRM13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.03c","secondary_identifiers":["UniProtKB:Q9UTH1"],"synonyms":[{"name":"Spom972h-TRMT13","type":"exact"},{"name":"tRNA methylase 13 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTH1"}


id: PBO:0081181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger GATA like protein 1","termid":"PBO:0081181"}


id: MONDO:0009506
data:
  {"annotated_genes":["SJAG_00739"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044208"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"functional neutrophil defect","termid":"MONDO:0015978"},{"relation_name":"is_a","term_name":"defective phagocytic cell engulfment","termid":"MONDO:0024626"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00739":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"specific granule deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:245480","Orphanet:169142","GARD:10778","MESH:C562873","SCTID:234587000","UMLS:C0398593","MEDGEN:140766"],"synonyms":[{"name":"SGD","type":"related"},{"name":"lactoferrin-deficient neutrophils","type":"related"},{"name":"neutrophil lactoferrin deficiency","type":"related"},{"name":"neutrophil-specific granule deficiency","type":"exact"},{"name":"recurrent infection due to specific granule deficiency","type":"exact"},{"name":"specific granule deficiency","type":"exact"}],"termid":"MONDO:0009506","terms_by_termid":{"MONDO:0044208":null},"xrefs":{"Monarch":{"xref_id":"0009506"}}}


id: SO:0000567
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome may be generated by recombination between two inversions; presumed to have a deficiency or duplication at each end of the inversion.","definition_xrefs":["FB:km"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aneuploid_chromosome","termid":"SO:0000550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inversion_derived_aneuploid_chromosome","synonyms":[{"name":"inversion derived aneuploid chromosome","type":"exact"}],"termid":"SO:0000567"}


id: GO:0035539
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 8-oxo-7,8-dihydrodeoxyguanosine-triphosphate (8-oxo-dGTP) + H2O = 8-oxo-7,8-dihydrodeoxyguanosine phosphate (8-oxo-dGMP) + diphosphate. 8-oxo-dGTP is the oxidised form of the free guanine nucleotide and can act as a potent mutagenic substrate for DNA synthesis causing transversion mutations. 8-oxo-dGTPase hydrolyses 8-oxo-dGTP to its monophosphate form to prevent the misincorporation of 8-oxo-dGTP into cellular DNA.","definition_xrefs":["PMID:17804481","PMID:7859359","PMID:7782328","RHEA:31575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0047429"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0047429","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity","secondary_identifiers":["Reactome:R-HSA-9750555","Reactome:R-HSA-2395849","EC:3.6.1.55","Reactome:R-HSA-2395869"],"synonyms":[{"name":"8-oxo-7,8-dihydro-2'-deoxyguanosine 5'-triphosphate pyrophosphohydrolase activity","type":"exact"},{"name":"8-oxo-7,8-dihydro-deoxyguanosine triphosphate pyrophosphatase activity","type":"exact"},{"name":"8-oxo-7,8-dihydrodeoxyguanosine triphosphatase activity","type":"exact"},{"name":"8-oxo-dGTP pyrophosphohydrolase activity","type":"exact"},{"name":"8-oxo-dGTPase activity","type":"exact"}],"termid":"GO:0035539"}


id: GO:0000219
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete vacuolar hydrogen-transporting ATPase (obsolete GO:0000219)","synonyms":[{"name":"V-ATPase","type":"exact"},{"name":"vacuolar hydrogen-transporting ATPase","type":"exact"}],"termid":"GO:0000219"}


id: GO:0071546
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A P granule that contains the PIWIL2-TDRD1 module, a set of proteins that act in the primary piRNA pathway. The pi-body corresponds to the cementing material between mitochondria found in gonocytes.","definition_xrefs":["PMID:20011505","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"P granule","termid":"GO:0043186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"pi-body","synonyms":[{"name":"intermitochondrial cement","type":"exact"}],"termid":"GO:0071546"}


id: MONDO:1012464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemangiosarcoma, non-human animal","termid":"MONDO:1011823"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemangiosarcoma, sheep","secondary_identifiers":["OMIA:001813-9940"],"termid":"MONDO:1012464","xrefs":{"Monarch":{"xref_id":"1012464"}}}


id: GO:0034107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of erythrocyte clearance.","definition_xrefs":["GOC:add","PMID:12905029","PMID:14754397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of tissue remodeling","termid":"GO:0034104"},{"relation_name":"is_a","term_name":"regulation of erythrocyte clearance","termid":"GO:0034106"},{"relation_name":"negatively_regulates","term_name":"erythrocyte clearance","termid":"GO:0034102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of erythrocyte clearance","synonyms":[{"name":"negative regulation of RBC clearance","type":"exact"},{"name":"negative regulation of neocytolysis","type":"narrow"},{"name":"negative regulation of red blood cell clearance","type":"exact"}],"termid":"GO:0034107"}


id: GO:0080083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of glucosidic link in beta-gentiobiose.","definition_xrefs":["PMID:15604686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"beta-gentiobiose beta-glucosidase activity","termid":"GO:0080083"}


id: MONDO:0005706
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A fungal infection caused by Coccidioides immitis. Affected individuals usually have mild flu-like symptoms. However, pneumonia and systemic involvement with the formation of abscesses may develop as complications of the disease.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary systemic mycosis","termid":"MONDO:0000308"},{"relation_name":"is_a","term_name":"parasitic infectious disease","termid":"MONDO:0005135"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coccidioidomycosis","secondary_identifiers":["icd11.foundation:132287989","MESH:D003047","MedDRA:10009825","EFO:0007211","ICD9:114","MEDGEN:3137","Orphanet:228123","SCTID:23247008","DOID:13450","ICD10CM:B38","GARD:9525","ICD9:114.1","ICD9:114.9","UMLS:C0009186","NCIT:C84642"],"synonyms":[{"name":"California disease","type":"exact"},{"name":"Coccidioides immitis caused disease or disorder","type":"exact"},{"name":"Coccidioides immitis disease or disorder","type":"exact"},{"name":"Coccidioides immitis infectious disease","type":"exact"},{"name":"Coccidioides infection","type":"exact"},{"name":"San Joaquin valley fever","type":"exact"},{"name":"Valley fever","type":"exact"},{"name":"desert fever","type":"exact"},{"name":"desert rheumatism","type":"exact"},{"name":"primary extrapulmonary coccidioidomycosis","type":"exact"}],"termid":"MONDO:0005706","xrefs":{"Monarch":{"xref_id":"0005706"}}}


id: GO:0098798
data:
  {"annotated_genes":["SJAG_05573","SJAG_03560","SJAG_03358","SJAG_00148","SJAG_04494","SJAG_01442","SJAG_03515","SJAG_02777","SJAG_03502","SJAG_04173","SJAG_02077","SJAG_02658","SJAG_04689","SJAG_00354","SJAG_07008","SJAG_03297","SJAG_01463","SJAG_01473","SJAG_05244","SJAG_04893","SJAG_02643","SJAG_03415","SJAG_04996","SJAG_00186","SJAG_00315","SJAG_04216","SJAG_04493","SJAG_03053","SJAG_02762","SJAG_00513","SJAG_04568","SJAG_02324","SJAG_00944","SJAG_04889","SJAG_00086","SJAG_00782","SJAG_01063","SJAG_02361","SJAG_01597","SJAG_03701","SJAG_01879","SJAG_03222","SJAG_00687","SJAG_04281","SJAG_00948","SJAG_01829","SJAG_00105","SJAG_03284","SJAG_03710","SJAG_03345","SJAG_05259","SJAG_04218","SJAG_01727","SJAG_01238","SJAG_01767","SJAG_03416","SJAG_04016","SJAG_01305","SJAG_01179","SJAG_02452","SJAG_03649","SJAG_03176","SJAG_02067","SJAG_04560","SJAG_04641","SJAG_00894","SJAG_04788","SJAG_00077","SJAG_06253","SJAG_04128","SJAG_04019","SJAG_04918","SJAG_03459","SJAG_02002","SJAG_04490","SJAG_05218","SJAG_03040","SJAG_00844","SJAG_01640","SJAG_04237","SJAG_04244","SJAG_01413","SJAG_04432","SJAG_01615","SJAG_04397","SJAG_02201","SJAG_00373","SJAG_00404","SJAG_01719","SJAG_01120","SJAG_01734","SJAG_02306","SJAG_01520","SJAG_00628","SJAG_01134","SJAG_01045","SJAG_00799","SJAG_01949","SJAG_03065","SJAG_02028","SJAG_01780","SJAG_04208","SJAG_01303","SJAG_01630","SJAG_03192","SJAG_02397","SJAG_02809","SJAG_04370","SJAG_00889","SJAG_00860","SJAG_01591","SJAG_03584","SJAG_04164","SJAG_04378","SJAG_02355","SJAG_02398","SJAG_03862","SJAG_00569","SJAG_04207","SJAG_05320","SJAG_05241","SJAG_02071","SJAG_01951","SJAG_07009","SJAG_05270","SJAG_02524","SJAG_00497","SJAG_02501","SJAG_03648","SJAG_02567","SJAG_01865","SJAG_06110","SJAG_04753","SJAG_01929","SJAG_03289","SJAG_02836","SJAG_03636","SJAG_03402","SJAG_01468","SJAG_00060","SJAG_01478","SJAG_01816","SJAG_03014","SJAG_00532","SJAG_02359","SJAG_04014"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[61055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061671"},{"annotations":[106640,117628,91065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036266"},{"annotations":[71726,71683,118473,81816,76510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032865"},{"annotations":[63801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005760"},{"annotations":[93645,115604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032478"},{"annotations":[78954,120610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031942"},{"annotations":[111570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990524"},{"annotations":[77614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005745"},{"annotations":[119646],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140275"},{"annotations":[109151,76801,80740,58110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061617"},{"annotations":[113643,112254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140595"},{"annotations":[115730,94998,94771,104927,111524,65117,108710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099128"},{"annotations":[94587,106588,111706,119713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120510"},{"annotations":[79168,89219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034245"},{"annotations":[81709,78574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042720"},{"annotations":[90469,94598,58494,118125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042719"},{"annotations":[82179,72944,111686,79039,80992,81469,72504,99793,110065,77355,118121,68362,110015,112953,78388,109916,114078,115305,98408,114579,116450,80175,79892,79632,79864,73885,99772,74542,81602,112624,76560,71366,73557,74803,78359,74208,105501,107532,116568,77128,118012,81152,119779,108588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005762"},{"annotations":[107406,115044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017087"},{"annotations":[104901,105822,108228,78298,104130,74337,107863,91771,98440,74969,80093,70895,109920,117452,111978,112512,96302,75903,96000,74105,110424,110180,99796,117872,91745,99797,114214,119947,77468,112230,97740,93894,75855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005763"},{"annotations":[113650,72828,75758,78461,105102,101053],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0001405"},{"annotations":[71682,75119,62628,92183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001401"},{"annotations":[75174,104744,115051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042721"},{"annotations":[61749,68122,76742,78797,77447,80495,71793],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005744"},{"annotations":[92704,109399,108002,101353,101238,109422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140596"}]},"cv_name":"cellular_component","definition":"A protein complex that is part of a mitochondrion.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing 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protein-containing complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"mitochondrial protein complex","type":"related"}],"termid":"GO:0098798","terms_by_termid":{"GO:0001401":null,"GO:0001405":null,"GO:0005744":null,"GO:0005745":null,"GO:0005760":null,"GO:0005762":null,"GO:0005763":null,"GO:0017087":null,"GO:0031942":null,"GO:0032478":null,"GO:0032865":null,"GO:0034245":null,"GO:0036266":null,"GO:0042719":null,"GO:0042720":null,"GO:0042721":null,"GO:0061617":null,"GO:0061671":null,"GO:0099128":null,"GO:0120510":null,"GO:0140275":null,"GO:0140595":null,"GO:0140596":null,"GO:1990524":null}}


id: PBO:0064698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 34","termid":"PBO:0064698"}


id: GO:0071113
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaIIb-beta3 integrin complex bound to the cell adhesion molecule ICAM-4.","definition_xrefs":["PMID:12477717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"alphaIIb-beta3 integrin-ICAM-4 complex","synonyms":[{"name":"ITGAIIb-ITGB3-ICAM4 complex","type":"narrow"}],"termid":"GO:0071113"}


id: PBO:0120034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial 5' to 3' DNA helicase Pif1/Pfh1 OR nuclear 5' to 3' DNA helicase Pif1/Pfh1","termid":"PBO:0120034"}


id: GO:0004408
data:
  {"annotated_genes":["SJAG_03199","SJAG_04008"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74586,78952],"is_not":false,"summary":null,"term":"GO:0004408"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: holocytochrome c = apocytochrome c + heme.","definition_xrefs":["EC:4.4.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03199":null,"SJAG_04008":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"holocytochrome-c synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:HOLOCYTOCHROME-C-SYNTHASE-RXN","Reactome:R-HSA-9866217","RHEA:22648"],"synonyms":[{"name":"cytochrome c heme-lyase activity","type":"related"},{"name":"cytochrome c synthase activity","type":"related"},{"name":"holocytochrome c synthetase activity","type":"related"},{"name":"holocytochrome-c apocytochrome-c-lyase (heme-forming)","type":"related"},{"name":"holocytochrome-c apocytochrome-c-lyase activity","type":"related"}],"termid":"GO:0004408","terms_by_termid":{"GO:0004408":null}}


id: MONDO:0021562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the umbilical cord stump in newborns.","definition_xrefs":["NCIT:C116008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"omphalitis","secondary_identifiers":["SCTID:239095007","GTR:AN0533760","MEDGEN:508000","UMLS:C0028992"],"synonyms":[{"name":"Omphalitis","type":"related"},{"name":"omphalitis","type":"exact"}],"termid":"MONDO:0021562","xrefs":{"Monarch":{"xref_id":"0021562"}}}


id: GO:0009526
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The double lipid bilayer enclosing a plastid and separating its contents from the rest of the cytoplasm; includes the intermembrane space.","definition_xrefs":["GOC:jy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle envelope","termid":"GO:0031967"},{"relation_name":"part_of","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"plastid envelope","termid":"GO:0009526"}


id: PBO:0031541
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-developmental_process_phenotype","termid":"PBO:0031541"}


id: MONDO:0021208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia","termid":"MONDO:0004907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocrine alopecia","secondary_identifiers":["MEDGEN:507423","SCTID:54539003","UMLS:C0002176","ICD9:704.09"],"termid":"MONDO:0021208","xrefs":{"Monarch":{"xref_id":"0021208"}}}


id: MONDO:1012333
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemophagocytic syndrome, non-human animal","termid":"MONDO:1011697"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemophagocytic syndrome, domestic cat","secondary_identifiers":["OMIA:001229-9685"],"termid":"MONDO:1012333","xrefs":{"Monarch":{"xref_id":"1012333"}}}


id: MONDO:1010416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myoclonus that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoclonus, non-human animal","termid":"MONDO:1010002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myoclonus, horse","secondary_identifiers":["OMIA:000689-9796"],"termid":"MONDO:1010416","xrefs":{"Monarch":{"xref_id":"1010416"}}}


id: MONDO:0014615
data:
  {"annotated_genes":["SJAG_03206"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87077],"is_not":false,"summary":null,"term":"MONDO:0014615"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"photosensitive trichothiodystrophy","termid":"MONDO:0002470"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03206":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0021190","MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"trichothiodystrophy 2, photosensitive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16100","MEDGEN:905904","NCIT:C173103","DOID:0111869","OMIM:616390","UMLS:C4225344"],"synonyms":[{"name":"TTD2","type":"related"},{"name":"trichothiodystrophy 2, photosensitive","type":"exact"}],"termid":"MONDO:0014615","terms_by_termid":{"MONDO:0014615":null},"xrefs":{"Monarch":{"xref_id":"0014615"}}}


id: PBO:0052184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium two pore domain channel subfamily K member 16","termid":"PBO:0052184"}


id: MONDO:0976134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"visceral heterotaxy","termid":"MONDO:0018677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterotaxy, visceral, 13, autosomal","secondary_identifiers":["OMIM:621079"],"termid":"MONDO:0976134","xrefs":{"Monarch":{"xref_id":"0976134"}}}


id: MONDO:0012588
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuronal ceroid lipofuscinosis 7 (CLN7-NCL) is a rare condition that affects the nervous system. Signs and symptoms of the condition generally develop in early childhood (average age 5 years) and may include loss of muscle coordination (ataxia), seizures that do not respond to medications, muscle twitches (myoclonus), visual impairment, and developmental regression (the loss of previously acquired skills). CLN7-NCL is caused by changes (mutations) in the MFSD8 gene and is inherited in an autosomal recessive manner. Treatment options are limited to therapies that can help relieve some of the symptoms.","direct_ancestors":[{"relation_name":"is_a","term_name":"late infantile neuronal ceroid lipofuscinosis","termid":"MONDO:0015674"},{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis","termid":"MONDO:0016295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002561","MONDO:0005559","MONDO:0002525"],"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis 7","secondary_identifiers":["MEDGEN:325457","UMLS:C1838571","GARD:1220","Orphanet:228366","DOID:0110722","MESH:C563989","OMIM:610951"],"synonyms":[{"name":"CLN7","type":"exact"},{"name":"CLN7 disease","type":"related"},{"name":"CLN7 disease, late infantile","type":"related"},{"name":"MFSD8 neuronal ceroid lipofuscinosis","type":"exact"},{"name":"ceroid lipofuscinosis, neuronal, 7","type":"related"},{"name":"ceroid lipofuscinosis, neuronal, type 7","type":"exact"},{"name":"neuronal ceroid lipofuscinosis 7","type":"exact"},{"name":"neuronal ceroid lipofuscinosis caused by mutation in MFSD8","type":"exact"},{"name":"neuronal ceroid lipofuscinosis type 7","type":"exact"}],"termid":"MONDO:0012588","xrefs":{"Monarch":{"xref_id":"0012588"}}}


id: PBO:0047734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin binding protein 4","termid":"PBO:0047734"}


id: MONDO:0000377
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Leydig cell tumor characterized by large tumor size, the presence of cytologic atypia, increased mitotic activity, necrosis, and vascular invasion. Approximately 10% of the testicular Leydig cell tumors show malignant characteristics and metastasize. Leydig cell tumors of the ovary follow a benign clinical course.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system cancer","termid":"MONDO:0002149"},{"relation_name":"is_a","term_name":"Leydig cell tumor","termid":"MONDO:0006266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant Leydig cell tumor","secondary_identifiers":["DOID:0050616","NCIT:C4213","ICDO:8650/3","UMLS:C0334410","MEDGEN:83143"],"synonyms":[{"name":"Leydig cell cancer","type":"exact"},{"name":"Leydig cell tumor, malignant","type":"exact"},{"name":"cancer of Leydig cell","type":"exact"},{"name":"malignant Leydig cell neoplasm","type":"exact"},{"name":"malignant interstitial cell neoplasm","type":"exact"},{"name":"malignant interstitial cell tumor","type":"related"},{"name":"malignant interstitial cell tumour","type":"related"},{"name":"malignant neoplasm of Leydig cell","type":"exact"}],"termid":"MONDO:0000377","xrefs":{"Monarch":{"xref_id":"0000377"}}}


id: MONDO:0010936
data:
  {"annotated_genes":["SJAG_04489"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87108],"is_not":false,"summary":null,"term":"MONDO:0010936"}]},"cv_name":"mondo","definition":"Any amyotrophic lateral sclerosis in which the cause of the disease is a mutation in the CHMP2B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"},{"relation_name":"is_a","term_name":"behavioral variant of frontotemporal dementia","termid":"MONDO:0017160"},{"relation_name":"is_a","term_name":"frontotemporal dementia and/or amyotrophic lateral sclerosis","termid":"MONDO:0030923"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04489":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"frontotemporal dementia and/or amyotrophic lateral sclerosis 7","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:331.19","OMIM:614696","SCTID:702393003","MESH:C579991","OMIM:600795","MESH:C563708","DOID:0060208","UMLS:C1833296","MEDGEN:318833","GARD:15322","DOID:0111227"],"synonyms":[{"name":"CHMP2B amyotrophic lateral sclerosis","type":"exact"},{"name":"CHMP2B-related amyotrophic lateral sclerosis","type":"exact"},{"name":"Dmt1","type":"related"},{"name":"FTD3","type":"exact"},{"name":"amyotrophic lateral sclerosis caused by mutation in CHMP2B","type":"exact"},{"name":"amyotrophic lateral sclerosis, Chmp2B-related","type":"exact"},{"name":"dementia, familial nonspecific","type":"related"},{"name":"frontotemporal dementia, chromosome 3-linked","type":"exact"}],"termid":"MONDO:0010936","terms_by_termid":{"MONDO:0010936":null},"xrefs":{"Monarch":{"xref_id":"0010936"}}}


id: PBO:0004431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex bromodomain subunit Spt7","termid":"PBO:0004431"}


id: PBO:0069651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 928, pseudogene","termid":"PBO:0069651"}


id: GO:1905371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ceramide phosphoethanolamine.","definition_xrefs":["GOC:TermGenie","GO_REF:0000068","GOC:hjd","PMID:25667419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"sphingolipid metabolic process","termid":"GO:0006665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"ceramide phosphoethanolamine metabolic process","synonyms":[{"name":"ceramide phosphoethanolamine metabolism","type":"exact"}],"termid":"GO:1905371"}


id: PBO:0086744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; possibly involved in zinc homeostasis; Bdf1p-dependent transcription induced by salt stress; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and the nucleus","termid":"PBO:0086744"}


id: MONDO:0005817
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Kluver Bucy syndrome is a rare behavioral impairment characterized by inappropriate sexual behaviors and mouthing of objects. Other signs and symptoms include diminished ability to visually recognize objects,loss of normal fear and anger responses, memory loss, distractibility, seizures, and dementia. It is associated with damage to the anterior temporal lobes of the brain. Cases have been reported in association with herpes encephalitis and head trauma. Treatment is symptomatic and may include the use of psychotropic medications.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"mental disorder","termid":"MONDO:0005084"},{"relation_name":"is_a","term_name":"impulse control disorder","termid":"MONDO:0001162"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"infectious encephalitis","termid":"MONDO:0020067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kluver-Bucy syndrome","secondary_identifiers":["MONDO:0015527","SCTID:10651001","UMLS:C0270707","MedDRA:10066431","MESH:D020232","NORD:1338","GARD:6840","EFO:0007335","MEDGEN:124361","NCIT:C84802","Orphanet:157823","DOID:2510"],"synonyms":[{"name":"KLuever-Bucy syndrome","type":"related"},{"name":"KLüver-Bucy syndrome","type":"exact"},{"name":"Kluver Bucy syndrome","type":"related"},{"name":"Klver-Bucy syndrome","type":"exact"},{"name":"bilateral temporal lobe disorder","type":"related"},{"name":"memory loss, extreme sexual behavior, placidity, and visual distractibility","type":"related"},{"name":"post-encephalitic Kluver Bucy syndrome (type)","type":"related"},{"name":"post-traumatic Kluver Bucy syndrome (type)","type":"related"},{"name":"syndrome, Kluver-Bucy","type":"related"},{"name":"temporal lobectomy behavior syndrome","type":"related"},{"name":"temporal lobectomy behaviour syndrome","type":"related"}],"termid":"MONDO:0005817","xrefs":{"Monarch":{"xref_id":"0005817"}}}


id: GO:0102291
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 11alpha-hydroxy-beta-amyrin + O2 + NADPH + H+ = 11-oxo-beta-amyrin + 2 H2O + NADP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 11alpha-hydroxy-beta-amyrin dehydrogenase activity (obsolete GO:0102291)","termid":"GO:0102291"}


id: PBO:0075948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stromal antigen 3-like 3 (pseudogene)","termid":"PBO:0075948"}


id: GO:0033013
data:
  {"annotated_genes":["SJAG_00626","SJAG_01155","SJAG_01372","SJAG_03961","SJAG_00699","SJAG_04984","SJAG_03862","SJAG_00366","SJAG_04515","SJAG_00097","SJAG_05283","SJAG_04109","SJAG_03173","SJAG_04944","SJAG_02876","SJAG_01841","SJAG_02896","SJAG_04397","SJAG_01192","SJAG_01786"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80137,81786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006784"},{"annotations":[102909,107021,76056,113726,115734,100037,102060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006783"},{"annotations":[108433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042167"},{"annotations":[63936,59546,65914,68926,63949,81783,57318,60690],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0006782"},{"annotations":[73099,78671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019354"},{"annotations":[76669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006780"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving tetrapyrroles, natural pigments containing four pyrrole rings joined by one-carbon units linking position 2 of one pyrrole ring to position 5 of the next.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_00366":null,"SJAG_00626":null,"SJAG_00699":null,"SJAG_01155":null,"SJAG_01192":null,"SJAG_01372":null,"SJAG_01786":null,"SJAG_01841":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03173":null,"SJAG_03862":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04397":null,"SJAG_04515":null,"SJAG_04944":null,"SJAG_04984":null,"SJAG_05283":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tetrapyrrole metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"tetrapyrrole metabolism","type":"exact"}],"termid":"GO:0033013","terms_by_termid":{"GO:0006780":null,"GO:0006782":null,"GO:0006783":null,"GO:0006784":null,"GO:0019354":null,"GO:0042167":null}}


id: PBO:0084995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH oxidase localized to the perinuclear ER; produces superoxide from NADPH; overexpression causes MCA1 dependent apoptosis; likely involved in superoxide-mediated regulation of the actin cytoskeleton; member of a conserved superfamily of NADPH oxidases (NOX enzymes); has similarity to iron/copper reductases (FRE1-8), particularly Fre8p","termid":"PBO:0084995"}


id: MONDO:0020005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare endocrine system disease.","gene_count":0,"genotype_count":0,"name":"obsolete rare endocrine disease (obsolete MONDO:0020005)","secondary_identifiers":["Orphanet:97978"],"synonyms":[{"name":"rare endocrine system disease","type":"exact"}],"termid":"MONDO:0020005","xrefs":{"Monarch":{"xref_id":"0020005"}}}


id: GO:0070254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of mucus by the mucosa. Mucus is a viscous slimy secretion consisting of mucins and various inorganic salts dissolved in water, with suspended epithelial cells and leukocytes. The mucosa, or mucous membrane, is the membrane covered with epithelium that lines the tubular organs of the body. Mucins are carbohydrate-rich glycoproteins that have a lubricating and protective function.","definition_xrefs":["GOC:add","ISBN:068340007X","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"body fluid secretion","termid":"GO:0007589"},{"relation_name":"is_a","term_name":"secretion by tissue","termid":"GO:0032941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"mucus secretion","synonyms":[{"name":"mucus production","type":"exact"}],"termid":"GO:0070254"}


id: MONDO:0008971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Pyle disease","termid":"MONDO:0009943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"chondrodysplasia calcificans Metaphysealis","secondary_identifiers":["MEDGEN:347809","MESH:C565855","OMIM:215050","UMLS:C1859147","GARD:10613"],"synonyms":[{"name":"chondrodysplasia calcificans Metaphysealis","type":"exact"}],"termid":"MONDO:0008971","xrefs":{"Monarch":{"xref_id":"0008971"}}}


id: MONDO:0004372
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic polyneuropathy","termid":"MONDO:0003335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"chronic toxic polyneuropathy","secondary_identifiers":["NCIT:C35603","MEDGEN:234149","UMLS:C1333048","DOID:7825"],"synonyms":[{"name":"chronic toxic polyneuropathy","type":"exact"}],"termid":"MONDO:0004372","xrefs":{"Monarch":{"xref_id":"0004372"}}}


id: MONDO:0015196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vein of Galen aneurysm is a rare formof arteriovenous malformation in which the embryonic precursor to the vein of Galen, a vein at the base of the brain, dilates causing too much blood to rush to the heart. This can lead to rapid heart failure. Other features may include increased head circumference resulting from hydrocephalus, unusually prominent veins on the face and scalp, developmental delay, persistent headache, and other neurological findings. Vein of Galen aneurysm is often recognized on an ultrasound late in pregnancy. In other cases, it is diagnosed after birth. Although the exact cause remains unknown, this condition appears to result from a defect in early fetal development. Treatment is aimed at decreasing the blood flow through the malformation while maximizing the blood supply to the brain. Minimally invasive surgical techniques are preferred, such as endovascular embolization.","direct_ancestors":[{"relation_name":"is_a","term_name":"arteriovenous hemangioma/malformation","termid":"MONDO:0001256"},{"relation_name":"is_a","term_name":"cerebral hemangioma","termid":"MONDO:0003948"},{"relation_name":"is_a","term_name":"vein disorder","termid":"MONDO:0004634"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vein of Galen aneurysm","secondary_identifiers":["icd11.foundation:1884295064","Orphanet:1053","UMLS:C0431420","MEDGEN:140912","SCTID:253194008","NCIT:C98642","GARD:5467","MESH:C536535"],"synonyms":[{"name":"Galen vein aneurysm","type":"related"},{"name":"Galenic arteriovenous malformation","type":"related"},{"name":"VGAM","type":"related"},{"name":"ectasia or varix of the vein of Galen","type":"related"},{"name":"vein of Galen aneurysm malformation","type":"related"},{"name":"vein of Galen arteriovenous malformations","type":"exact"}],"termid":"MONDO:0015196","xrefs":{"Monarch":{"xref_id":"0015196"}}}


id: PBO:0080637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 86","termid":"PBO:0080637"}


id: PBO:0064803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 1A","termid":"PBO:0064803"}


id: PBO:0083132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dual-specificity kinase; autophosphorylation required for function; required for spindle pole body (SPB) duplication and spindle checkpoint function; contributes to bi-orientation by promoting formation of force-generating kinetochore-microtubule attachments in meiosis I; substrates include SPB proteins Spc42p, Spc110p, and Spc98p, mitotic exit network protein Mob1p, kinetochore protein Cnn1p, and checkpoint protein Mad1p; substrate of APCC(Cdh1); similar to human Mps1p","termid":"PBO:0083132"}


id: PBO:0066652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD50 interactor 1","termid":"PBO:0066652"}


id: MONDO:0004591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An impetigo that is characterized as a form of severe pustular psoriasis occurring in pregnancy.","definition_xrefs":["DOID:8503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"impetigo","termid":"MONDO:0004592"},{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"impetigo herpetiformis","secondary_identifiers":["SCTID:65539006","NANDO:1200243","ICD9:694.3","UMLS:C1314968","MEDGEN:727290"],"termid":"MONDO:0004591","xrefs":{"Monarch":{"xref_id":"0004591"}}}


id: MONDO:1012168
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lower motor neuron disease, non-human animal","termid":"MONDO:1011848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lower motor neuron disease, horse","secondary_identifiers":["OMIA:000662-9796"],"termid":"MONDO:1012168","xrefs":{"Monarch":{"xref_id":"1012168"}}}


id: PBO:0074791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 11B","termid":"PBO:0074791"}


id: PATO:0001779
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A strength which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"strength","termid":"PATO:0001230"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased strength","synonyms":[{"name":"weak","type":"exact"}],"termid":"PATO:0001779"}


id: PBO:0084618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Metallothionein; binds copper and mediates resistance to high concentrations of copper and cadmium; locus is variably amplified in different strains, with two copies, CUP1-1 and CUP1-2, in the genomic sequence reference strain S288C; CUP1-2 has a paralog, CUP1-1, that arose from a segmental duplication","termid":"PBO:0084618"}


id: FYPO:0006018
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains fewer nuclear pore complexes than normal.","definition_xrefs":["PomBase:mah","PMID:28242692"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased nuclear pore density","synonyms":[{"name":"decreased NPC density","type":"exact"},{"name":"decreased nuclear pore complex density","type":"exact"},{"name":"decreased nuclear pore density during mitotic cell cycle","type":"exact"},{"name":"decreased nuclear pore density during vegetative growth","type":"exact"},{"name":"nuclear pore complexes present in decreased number","type":"exact"},{"name":"nuclear pores present in decreased number","type":"exact"},{"name":"reduced nuclear pore density","type":"exact"}],"termid":"FYPO:0006018"}


id: PBO:0081322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 112","termid":"PBO:0081322"}


id: GO:0072214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric cortex over time, from its formation to the mature structure. The metanephric cortex is the outer region of the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchyme development","termid":"GO:0060485"},{"relation_name":"is_a","term_name":"renal cortex development","termid":"GO:0072055"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric cortex development","termid":"GO:0072214"}


id: PBO:0053836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1101","termid":"PBO:0053836"}


id: GO:0021558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the trochlear nerve over time, from its formation to the mature structure. The trochlear nerve is a motor nerve and is the only cranial nerve to exit the brain dorsally. The trochlear nerve innervates the superior oblique muscle.","definition_xrefs":["GOC:dph","GOC:jid","GOC:dgh","GO_REF:0000021","ISBN:0838580343","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve development","termid":"GO:0021545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trochlear nerve development","synonyms":[{"name":"CN IV development","type":"related"},{"name":"cranial nerve 4 development","type":"exact"},{"name":"cranial nerve IV development","type":"exact"}],"termid":"GO:0021558"}


id: PBO:0039411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANAPC15 pseudogene 1","termid":"PBO:0039411"}


id: PBO:0040306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+/K+ transporting subunit alpha","termid":"PBO:0040306"}


id: GO:0016730
data:
  {"annotated_genes":["SJAG_00972","SJAG_01063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008860"},{"annotations":[111530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004324"},{"annotations":[65767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160246"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which an iron-sulfur protein acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00972":null,"SJAG_01063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on iron-sulfur proteins as donors","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:1.18.-.-"],"synonyms":[{"name":"oxidoreductase activity, acting on iron-sulphur proteins as donors","type":"exact"}],"termid":"GO:0016730","terms_by_termid":{"GO:0004324":null,"GO:0008860":null,"GO:0160246":null}}


id: MONDO:0016961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 10","termid":"MONDO:0016931"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the long arm of chromosome 10","secondary_identifiers":["Orphanet:262914","GARD:20881","UMLS:C0265437","MONDO:0042978","icd11.foundation:2004070452","MEDGEN:539251"],"synonyms":[{"name":"partial duplication of chromosome 10q","type":"exact"},{"name":"partial trisomy of chromosome 10q","type":"exact"},{"name":"partial trisomy of the long arm of chromosome 10","type":"exact"}],"termid":"MONDO:0016961","xrefs":{"Monarch":{"xref_id":"0016961"}}}


id: PBO:0034699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocytic docking protein Mso1","termid":"PBO:0034699"}


id: MONDO:0100568
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Mycobacterium tuberculosis, protection against (obsolete MONDO:0100568)","termid":"MONDO:0100568","xrefs":{"Monarch":{"xref_id":"0100568"}}}


id: MONDO:0004644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute monocytic leukemia","termid":"MONDO:0007896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"subacute monocytic leukemia","secondary_identifiers":["DOID:8696","MEDGEN:508955","UMLS:C0152275","ICD9:206.2","ICD9:206.20","SCTID:188746008"],"termid":"MONDO:0004644","xrefs":{"Monarch":{"xref_id":"0004644"}}}


id: GO:0018282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a cluster of several metal atoms, including iron, nickel, molybdenum, vanadium, or copper, with one or more bridging (mu-bond) sulfur atoms; amino acids residues in proteins that may ligate the metal sulfur cluster are cysteine, histidine, aspartate, glutamate, serine and cysteine persulfide.","definition_xrefs":["GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"},{"relation_name":"part_of","term_name":"metallo-sulfur cluster assembly","termid":"GO:0031163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"metal incorporation into metallo-sulfur cluster","synonyms":[{"name":"metal incorporation into metallo-sulphur cluster","type":"exact"}],"termid":"GO:0018282"}


id: GO:0014741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of muscle hypertrophy.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle hypertrophy","termid":"GO:0014743"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"muscle hypertrophy","termid":"GO:0014896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of muscle hypertrophy","termid":"GO:0014741"}


id: PBO:0085123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein; forms a complex with Nop14p that mediates maturation and nuclear export of 40S ribosomal subunits; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0085123"}


id: FYPO:0007732
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin at the 3' ends of genes that can be transcribed by RNA polymerase III is normal (i.e. indistinguishable from wild type) during metaphase of the mitotic cell cycle.","definition_xrefs":["PMID:33771877","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin at 3' end of genes","termid":"FYPO:0007731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to chromatin at 3' end of RNA polymerase III-transcribed genes during mitotic metaphase","synonyms":[{"name":"normal condensin localization to chromatin at 3' end of RNA polymerase III-transcribed genes during mitotic metaphase","type":"narrow"},{"name":"normal protein localisation to chromatin at 3' end of RNA polymerase III-transcribed genes during mitotic metaphase","type":"exact"},{"name":"normal protein localization to chromatin at 3' end of RNA polymerase III-transcribed genes during metaphase during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin at 3' end of RNA polymerase III-transcribed genes during metaphase of mitotic cell cycle","type":"exact"},{"name":"normal protein localization to chromatin downstream of RNA polymerase III-transcribed genes during mitotic metaphase","type":"exact"}],"termid":"FYPO:0007732"}


id: GO:0050214
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AH2 + O2 + progesterone = A + H2O + testosterone acetate.","definition_xrefs":["RHEA:11984","PMID:5950688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"progesterone monooxygenase activity","secondary_identifiers":["EC:1.14.99.4","KEGG_REACTION:R02212","MetaCyc:PROGESTERONE-MONOOXYGENASE-RXN"],"synonyms":[{"name":"progesterone hydroxylase activity","type":"related"},{"name":"progesterone,hydrogen-donor:oxygen oxidoreductase (hydroxylating)","type":"related"}],"termid":"GO:0050214"}


id: GO:1901751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving leukotriene A4.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"},{"relation_name":"is_a","term_name":"leukotriene metabolic process","termid":"GO:0006691"},{"relation_name":"is_a","term_name":"epoxide metabolic process","termid":"GO:0097176"},{"relation_name":"is_a","term_name":"fatty acid derivative metabolic process","termid":"GO:1901568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"leukotriene A4 metabolic process","synonyms":[{"name":"leukotriene A4 metabolism","type":"exact"}],"termid":"GO:1901751"}


id: PBO:0028949
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_cell_tip","termid":"PBO:0028949"}


id: GO:0002733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of myeloid dendritic cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dendritic cell cytokine production","termid":"GO:0002730"},{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte mediated immunity","termid":"GO:0002886"},{"relation_name":"regulates","term_name":"myeloid dendritic cell cytokine production","termid":"GO:0002372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of myeloid dendritic cell cytokine production","termid":"GO:0002733"}


id: MONDO:0008560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemostatic disorder characterized by a poor anticoagulant response to activated protein C (APC). The activated form of Factor V (Factor Va) is more slowly degraded by activated protein C. Factor V Leiden mutation (R506Q) is the most common cause of APC resistance.","definition_xrefs":["MESH:D020016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"},{"relation_name":"is_a","term_name":"inherited thrombophilia","termid":"MONDO:0100240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombophilia due to activated protein C resistance","secondary_identifiers":["ICD9:289.81","SCTID:421527008","MEDGEN:396074","UMLS:C1861171","DOID:0111902","OMIM:188055"],"synonyms":[{"name":"APC resistance","type":"related"},{"name":"Activated Protein C resistance","type":"related"},{"name":"Pccf deficiency","type":"related"},{"name":"Proc cofactor deficiency","type":"related"},{"name":"THPH2","type":"related"},{"name":"resistance, APC","type":"related"},{"name":"thrombophilia 2 due to activated protein C resistance","type":"exact"},{"name":"thrombophilia 5","type":"related"},{"name":"thrombophilia due to ACTIVATED PROTEIN C resistance","type":"related"},{"name":"thrombophilia due to Factor 5 Leiden","type":"related"},{"name":"thrombophilia due to activated protein C resistance","type":"exact"},{"name":"thrombophilia due to deficiency of Activated Protein C cofactor","type":"related"},{"name":"thrombophilia, susceptibility to, due to factor V Leiden","type":"related"}],"termid":"MONDO:0008560","xrefs":{"Monarch":{"xref_id":"0008560"}}}


id: SO:0001312
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N6_2prime_O_dimethyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_2_prime_O_dimethyladenosine","secondary_identifiers":["RNAMOD:088"],"synonyms":[{"name":"N6 2 prime O dimethyladenosine","type":"exact"},{"name":"N6,2'-O-dimethyladenosine","type":"exact"},{"name":"m6Am","type":"exact"}],"termid":"SO:0001312"}


id: MONDO:0000873
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphoma composed of immature small to medium-sized precursor lymphoid cells (lymphoblasts). It includes the B- and T-cell lymphoblastic lymphoma.","definition_xrefs":["NCIT:C9360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"precursor lymphoblastic lymphoma/leukemia","termid":"MONDO:0003538"},{"relation_name":"is_a","term_name":"non-Hodgkin lymphoma","termid":"MONDO:0018908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"lymphoblastic lymphoma","secondary_identifiers":["DOID:0080147","ICD9:202.80","ICDO:9727/3","SCTID:109965004","MEDGEN:42541","UMLS:C0079748","GARD:3329"],"synonyms":[{"name":"lymphoblastic lymphoma","type":"exact"},{"name":"lymphoma, lymphoblastic","type":"related"},{"name":"lymphoma, lymphoblastic, malignant","type":"exact"},{"name":"precursor cell lymphoblastic lymphoma","type":"exact"},{"name":"precursor lymphoblastic lymphoma","type":"exact"}],"termid":"MONDO:0000873","xrefs":{"Monarch":{"xref_id":"0000873"}}}


id: GO:0018512
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1,6-dihydroxy-5-methylcyclohexa-2,4-dienecarboxylate + NAD+ = 3-methylcatechol + CO2 + NADH + H+.","definition_xrefs":["EC:1.3.1.59"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,6-dihydroxy-5-methylcyclohexa-2,4-dienecarboxylate dehydrogenase activity (obsolete GO:0018512)","synonyms":[{"name":"1,2-dihydroxy-3-methylcyclohexa-3,5-diene-carboxylate dehydrogenase activity","type":"exact"},{"name":"1,6-dihydroxy-5-methylcyclohexa-2,4-dienecarboxylate dehydrogenase activity","type":"exact"}],"termid":"GO:0018512"}


id: MONDO:0042981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aortic valve stenosis (AVS) is a condition characterized by narrowing of the heart's aortic valve opening. This narrowing prevents the valve from opening fully, which obstructs blood flow from the heart into the aorta, and onward to the rest of the body. AVS can range from mild to severe. Signs and symptoms typically develop when the narrowing of the opening is severe and may include chest pain (angina) or tightness; shortness of breath or fatigue (especially during exertion); feeling faint or fainting; heart palpitations; and heart murmur. Individuals with less severe congenital AVS (present at birth) may not develop symptoms until adulthood. Individuals with severe cases may faint without warning. AVS can have several causes including abnormal development before birth (such as having 1 or 2 valve leaflets instead of 3); calcium build-up on the valve in adulthood; and rheumatic fever.","definition_xrefs":["GARD:0005830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aortic valve disorder","termid":"MONDO:0003803"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"aortic valve stenosis","secondary_identifiers":["SCTID:18546004","GARD:5830","ICD9:395.0","NANDO:2200306","MESH:D001024","ICD9:746.3","HP:0001650","SCTID:60573004","UMLS:C0003507","SCTID:72011007","DOID:1712","icd11.foundation:956813047","MEDGEN:1621","ICD10CM:I06.0","NCIT:C50462"],"synonyms":[{"name":"AS","type":"exact"},{"name":"aortic stenosis","type":"exact"},{"name":"rheumatic aortic stenosis","type":"narrow"},{"name":"rheumatic aortic valve stenosis","type":"narrow"},{"name":"stenosed aortic valve","type":"related"},{"name":"valvular aortic stenosis","type":"related"}],"termid":"MONDO:0042981","xrefs":{"Monarch":{"xref_id":"0042981"}}}


id: PBO:0062159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily H member 12 pseudogene","termid":"PBO:0062159"}


id: PBO:0111443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial rhomboid family peptidase Rbd3","termid":"PBO:0111443"}


id: MONDO:0002647
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or chronic, bacterial or viral inflammatory process affecting the larynx. Signs and symptoms include sore throat, cough, swallowing difficulties, and hoarseness.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngeal disorder","termid":"MONDO:0004382"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laryngitis","secondary_identifiers":["MEDGEN:7273","SCTID:45913009","UMLS:C0023067","DOID:3437","ICD9:464.00","MESH:D007827","NCIT:C26811"],"synonyms":[{"name":"inflammation of larynx","type":"exact"},{"name":"laryngeal Inflammation","type":"exact"},{"name":"laryngeal inflammation","type":"exact"},{"name":"larynx inflammation","type":"exact"}],"termid":"MONDO:0002647","xrefs":{"Monarch":{"xref_id":"0002647"}}}


id: GO:0090647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the processes that arise as an organism progresses toward the end of its lifespan that results in a decline in behavioral activities such as locomotory behavior, and learning or memory.","definition_xrefs":["GOC:kmv","GOC:cjm","PMID:20523893"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of age-related behavioral decline (obsolete GO:0090647)","termid":"GO:0090647"}


id: MONDO:1011532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperadrenocorticism that occurs in domestic ferret.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperadrenocorticism, non-human animal","termid":"MONDO:1011403"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperadrenocorticism, domestic ferret","secondary_identifiers":["OMIA:000494-9669"],"termid":"MONDO:1011532","xrefs":{"Monarch":{"xref_id":"1011532"}}}


id: GO:0072526
data:
  {"annotated_genes":["SJAG_03660","SJAG_01543","SJAG_02369","SJAG_01310","SJAG_02945","SJAG_03373","SJAG_02107","SJAG_06621","SJAG_04334","SJAG_00605","SJAG_00839","SJAG_04048","SJAG_00685","SJAG_04192","SJAG_03828","SJAG_02009","SJAG_06622","SJAG_02785","SJAG_04495","SJAG_02135","SJAG_05314","SJAG_00461","SJAG_02796","SJAG_03903","SJAG_03091","SJAG_00027"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74174,107650,111239,111240,107282,111241,100077,107280,111237,96338,118208,99806,105459,79584,107651,111236,105202,111235,107281,111238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[90422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[74133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019677"},{"annotations":[74134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006742"},{"annotations":[74826,77883],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[71755],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"},{"annotations":[102689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042820"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a pyridine-containing compound, i.e. any compound that contains pyridine or a formal derivative thereof.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic process","termid":"GO:0072524"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_01543":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03091":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pyridine-containing compound catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyridine and derivative catabolic process","type":"exact"},{"name":"pyridine-containing compound breakdown","type":"exact"},{"name":"pyridine-containing compound catabolism","type":"exact"},{"name":"pyridine-containing compound degradation","type":"exact"}],"termid":"GO:0072526","terms_by_termid":{"GO:0006110":null,"GO:0006742":null,"GO:0019677":null,"GO:0042820":null,"GO:0045820":null,"GO:0061613":null,"GO:0061621":null}}


id: MONDO:0019172
data:
  {"annotated_genes":["SJAG_03677"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"}]},"cv_name":"mondo","definition":"Aniridia is a congenital ocular malformation characterized by the complete or partial absence of the iris. It can be isolated or part of a syndrome (isolated and syndromic aniridia).","definition_xrefs":["Orphanet:77"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iris disorder","termid":"MONDO:0002289"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"aniridia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1941","DOID:12271","icd11.foundation:970699895","MedDRA:10002532","SCTID:69278003","ICD10CM:Q13.1","NCIT:C84563","MESH:D015783","UMLS:C0003076","NANDO:1201001","ICD9:743.45"],"synonyms":[{"name":"aplasia of iris","type":"exact"}],"termid":"MONDO:0019172","terms_by_termid":{"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0019172"}}}


id: MONDO:0010057
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spinal muscular atrophy","termid":"MONDO:0001516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spinal muscular atrophy, Ryukyuan type","secondary_identifiers":["UMLS:C1849102","MEDGEN:376517","GARD:9646","OMIM:271200","MESH:C536881"],"synonyms":[{"name":"Ryukyuan muscular atrophy","type":"related"},{"name":"spinal muscular atrophy Ryukyuan type","type":"related"},{"name":"spinal muscular atrophy, Ryukyuan type","type":"exact"}],"termid":"MONDO:0010057","xrefs":{"Monarch":{"xref_id":"0010057"}}}


id: MONDO:0016555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"transient congenital hypothyroidism","termid":"MONDO:0015792"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient congenital hypothyroidism due to maternal factor","secondary_identifiers":["Orphanet:238696","UMLS:C5680929","GARD:20645","MEDGEN:1842783"],"termid":"MONDO:0016555","xrefs":{"Monarch":{"xref_id":"0016555"}}}


id: PATO:0001246
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of brown hue and high brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brown","termid":"PATO:0000952"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"light brown","termid":"PATO:0001246"}


id: PR:O94593
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC622.03c gene.","definition_xrefs":["UniProtKB:O94593","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C622.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.03c","synonyms":[{"name":"Spom972h-SPCC622.03c","type":"exact"}],"termid":"PR:O94593"}


id: PBO:0058128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4430","termid":"PBO:0058128"}


id: PBO:0041268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q like 1","termid":"PBO:0041268"}


id: MONDO:0054550
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial avascular necrosis of femoral head","termid":"MONDO:0012126"},{"relation_name":"is_a","term_name":"dysplasia of the proximal femoral epiphyses","termid":"MONDO:1030002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"avascular necrosis of femoral head, primary, 1","secondary_identifiers":["MEDGEN:1639295","UMLS:C4551562","OMIM:608805"],"synonyms":[{"name":"ANFH1","type":"related"},{"name":"Femoral head, avascular necrosis of","type":"related"},{"name":"avascular necrosis of femoral head, primary, 1","type":"exact"},{"name":"avascular necrosis of the femoral head","type":"exact"},{"name":"femoral head, aseptic necrosis of","type":"related"},{"name":"ischaemic necrosis of femoral head","type":"related"},{"name":"ischemic necrosis of femoral head","type":"related"},{"name":"osteonecrosis of femoral head","type":"related"}],"termid":"MONDO:0054550","xrefs":{"Monarch":{"xref_id":"0054550"}}}


id: MOD:00886
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to 6'-chloro-L-tryptophan.","definition_xrefs":["RESID:AA0180","Unimod:936#W","PubMed:9033387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monochlorinated L-tryptophan","termid":"MOD:01913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6'-chloro-L-tryptophan","synonyms":[{"name":"(2S)-2-amino-3-(6-chloro-1H-indol-3-yl)propanoic acid","type":"exact"},{"name":"6'-ClTrp","type":"exact"},{"name":"6'-chloro-L-tryptophan","type":"exact"},{"name":"MOD_RES 6'-chlorotryptophan","type":"exact"}],"termid":"MOD:00886"}


id: MONDO:0012081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The 15q11-q13 microduplication (dup15q11-q13) syndrome is characterized by neurobehavioral disorders, hypotonia, cognitive deficit, language delay and seizures. Prevalence is unknown.","definition_xrefs":["Orphanet:238446"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"excluded_subClassOf","term_name":"epilepsy","termid":"MONDO:0005027"},{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 15","termid":"MONDO:0016965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"15q11q13 microduplication syndrome","secondary_identifiers":["SCTID:719427001","OMIM:608636","GARD:17172","MEDGEN:390767","UMLS:C2675336","NCIT:C126692"],"synonyms":[{"name":"15q11-q13 duplication syndrome","type":"exact"},{"name":"15q11-q13 microduplication syndrome","type":"exact"},{"name":"15q11q13 duplication syndrome","type":"exact"},{"name":"Dup15q","type":"exact"},{"name":"Duplication 15Q11-q13 syndrome","type":"related"},{"name":"autism susceptibility 4","type":"exact"},{"name":"autism, susceptibility to, 4","type":"related"},{"name":"chromosome 15Q11.2 Duplication syndrome","type":"related"},{"name":"chromosome 15q11-q13 DUPLICATION syndrome","type":"related"},{"name":"dup(15)(q11q13)","type":"exact"},{"name":"trisomy 15q11-q13","type":"exact"},{"name":"trisomy 15q11q13","type":"exact"}],"termid":"MONDO:0012081","xrefs":{"Monarch":{"xref_id":"0012081"}}}


id: MONDO:0013779
data:
  {"annotated_genes":["SJAG_03119"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88470],"is_not":false,"summary":null,"term":"MONDO:0013779"}]},"cv_name":"mondo","definition":"Any Wiskott-Aldrich syndrome in which the cause of the disease is a mutation in the WIPF1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03119":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Wiskott-Aldrich syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C176820","UMLS:C3281001","MEDGEN:482631","GARD:15809","OMIM:277970","OMIM:614493"],"synonyms":[{"name":"WAS2","type":"related"},{"name":"WIPF1 Wiskott-Aldrich syndrome","type":"exact"},{"name":"Wipf1 deficiency","type":"related"},{"name":"Wiskott-Aldrich syndrome 2","type":"exact"},{"name":"Wiskott-Aldrich syndrome caused by mutation in WIPF1","type":"exact"},{"name":"Wiskott-Aldrich syndrome type 2","type":"exact"}],"termid":"MONDO:0013779","terms_by_termid":{"MONDO:0013779":null},"xrefs":{"Monarch":{"xref_id":"0013779"}}}


id: PBO:0046009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 1 pseudogene 4","termid":"PBO:0046009"}


id: PBO:0026667
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-septated_mononucleate_vegetative_cell","termid":"PBO:0026667"}


id: GO:0098646
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A hexagonal shaped collagen network formed by collagen type X trimer, mostly found in the cartilage hyaline matrix, which located in the interstitial area.","definition_xrefs":["PMID:21421911","PMID:34948124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen network","termid":"GO:0098645"},{"relation_name":"part_of","term_name":"interstitial matrix","termid":"GO:0005614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"interstitial hexagonal collagen network","synonyms":[{"name":"collagen hexagonal network","type":"exact"}],"termid":"GO:0098646"}


id: MONDO:0002049
data:
  {"annotated_genes":["SJAG_04387","SJAG_01732","SJAG_04621","SJAG_02431","SJAG_03818","SJAG_02744","SJAG_01784","SJAG_01852","SJAG_04509","SJAG_02951","SJAG_02509","SJAG_03703","SJAG_04003"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88145,88144],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015912"},{"annotations":[88430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800047"},{"annotations":[88762,88761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030827"},{"annotations":[87687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014757"},{"annotations":[86936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014078"},{"annotations":[89005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010743"},{"annotations":[88963,88965,88964],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958333"},{"annotations":[88093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012775"},{"annotations":[88897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010121"}]},"cv_name":"mondo","definition":"A laboratory test result indicating that there is an abnormally small number of platelets in the circulating blood.","definition_xrefs":["NCIT:C3408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood platelet disease","termid":"MONDO:0002245"}],"gene_count":13,"genes_by_uniquename":{"SJAG_01732":null,"SJAG_01784":null,"SJAG_01852":null,"SJAG_02431":null,"SJAG_02509":null,"SJAG_02744":null,"SJAG_02951":null,"SJAG_03703":null,"SJAG_03818":null,"SJAG_04003":null,"SJAG_04387":null,"SJAG_04509":null,"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombocytopenia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0040034","icd11.foundation:683583694","DOID:1588","ICD9:287.5","MEDGEN:52737","SCTID:302215000","MESH:D013921"],"synonyms":[{"name":"platelet count decreased","type":"exact"},{"name":"thrombocytopenic disorder","type":"exact"}],"termid":"MONDO:0002049","terms_by_termid":{"MONDO:0010121":null,"MONDO:0010743":null,"MONDO:0012775":null,"MONDO:0014078":null,"MONDO:0014757":null,"MONDO:0015912":null,"MONDO:0030827":null,"MONDO:0800047":null,"MONDO:0958333":null},"xrefs":{"Monarch":{"xref_id":"0002049"}}}


id: MONDO:0013889
data:
  {"annotated_genes":["SJAG_04956"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87925],"is_not":false,"summary":null,"term":"MONDO:0013889"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04956":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"short stature-optic atrophy-Pelger-HuC+t anomaly syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:10945","OMIM:614800","MEDGEN:762020","Orphanet:391677","UMLS:C3541319"],"synonyms":[{"name":"short stature with optic atrophy and Pelger-Huët anomaly syndrome","type":"related"},{"name":"short stature, optic nerve atrophy, and Pelger-Huet anomaly","type":"related"},{"name":"short stature-optic atrophy-Pelger-HuC+t anomaly syndrome","type":"exact"},{"name":"short stature-optic atrophy-Pelger-Huët anomaly syndrome","type":"related"},{"name":"soph","type":"related"},{"name":"soph syndrome","type":"exact"}],"termid":"MONDO:0013889","terms_by_termid":{"MONDO:0013889":null},"xrefs":{"Monarch":{"xref_id":"0013889"}}}


id: PBO:0076268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWT1 RNA endoribonuclease homolog","termid":"PBO:0076268"}


id: PBO:0074419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 18","termid":"PBO:0074419"}


id: PBO:0078395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 5-1","termid":"PBO:0078395"}


id: PBO:0076306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptogyrin 2 pseudogene 2","termid":"PBO:0076306"}


id: MONDO:0054805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly 22, primary, autosomal recessive","secondary_identifiers":["GARD:16279","MEDGEN:1635688","UMLS:C4693834","OMIM:617984"],"synonyms":[{"name":"MCPH22","type":"related"},{"name":"microcephaly 22, PRIMARY, autosomal recessive","type":"related"}],"termid":"MONDO:0054805","xrefs":{"Monarch":{"xref_id":"0054805"}}}


id: PBO:0076391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TACR3 antisense RNA 1","termid":"PBO:0076391"}


id: PBO:0003396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein Gap1","termid":"PBO:0003396"}


id: PBO:0061381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 41","termid":"PBO:0061381"}


id: GO:0019457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-methionine into other compounds, including succinyl-CoA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinyl-CoA metabolic process","termid":"GO:0006104"},{"relation_name":"is_a","term_name":"L-methionine catabolic process","termid":"GO:0009087"},{"relation_name":"is_a","term_name":"amide catabolic process","termid":"GO:0043605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0006520","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"L-methionine catabolic process to succinyl-CoA","secondary_identifiers":["MetaCyc:METHIONINE-DEG1-PWY"],"synonyms":[{"name":"methionine breakdown to succinyl-CoA","type":"exact"},{"name":"methionine degradation to succinyl-CoA","type":"exact"}],"termid":"GO:0019457"}


id: GO:0030402
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Was not defined before being made obsolete.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete matrilysin-2 activity (obsolete GO:0030402)","synonyms":[{"name":"MMP-26","type":"exact"},{"name":"matrilysin-2 activity","type":"exact"},{"name":"matrix metalloproteinase 26","type":"exact"}],"termid":"GO:0030402"}


id: PBO:0039098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylhomocysteinase pseudogene 2","termid":"PBO:0039098"}


id: GO:0010333
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"terpene synthase activity","termid":"GO:0010333"}


id: PBO:0108622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGBP1 pseudogene 5","termid":"PBO:0108622"}


id: PBO:0079678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3A","termid":"PBO:0079678"}


id: MONDO:0000439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete batten disease (obsolete MONDO:0000439)","termid":"MONDO:0000439","xrefs":{"Monarch":{"xref_id":"0000439"}}}


id: PBO:0050324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 26","termid":"PBO:0050324"}


id: FYPO:0007218
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 18 of histone H3 in regions containing protein-coding genes occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:31260531"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3 acetylation during vegetative growth","termid":"FYPO:0002362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0002274"],"is_obsolete":false,"name":"decreased histone H3-K18 acetylation at protein coding gene during vegetative growth","synonyms":[{"name":"decreased histone H3-K18 acetylation at protein coding gene during mitotic cell cycle","type":"related"},{"name":"decreased histone H3-K18 acetylation at protein-coding gene during vegetative growth","type":"exact"},{"name":"decreased histone H3K18 acetylation at protein coding gene during vegetative growth","type":"exact"},{"name":"reduced histone H3-K18 acetylation at protein coding gene during vegetative growth","type":"exact"}],"termid":"FYPO:0007218"}


id: PBO:0011436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposable element/transposon Tf2-type","termid":"PBO:0011436"}


id: GO:0044376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of the DNA-directed RNA polymerase II core complex from the cytoplasm into the nucleus.","definition_xrefs":["GOC:jl","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase II complex import to nucleus (obsolete GO:0044376)","synonyms":[{"name":"DNA-directed RNA polymerase II core complex import into nucleus","type":"exact"},{"name":"DNA-directed RNA polymerase II core complex localization to nucleus","type":"exact"},{"name":"RNA polymerase II complex import into nucleus","type":"exact"},{"name":"RNA polymerase II complex localisation to nucleus","type":"exact"}],"termid":"GO:0044376"}


id: GO:0106180
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of hydrons (hydron being the general name for H+ in its natural abundance).","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity of hydrons (obsolete GO:0106180)","termid":"GO:0106180"}


id: MONDO:0013614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertelorism-preauricular sinus-punctual pits-deafness syndrome","secondary_identifiers":["OMIM:614187","Orphanet:293958","UMLS:C4751125","MEDGEN:1659106","GARD:17351"],"synonyms":[{"name":"HPPD","type":"exact"},{"name":"hypertelorism, preauricular sinus, punctal pits, and deafness","type":"related"},{"name":"hypertelorism-preauricular sinus-punctual pits-hearing loss syndrome","type":"exact"}],"termid":"MONDO:0013614","xrefs":{"Monarch":{"xref_id":"0013614"}}}


id: PBO:0041165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTG anti-proliferation factor 2","termid":"PBO:0041165"}


id: GO:0036376
data:
  {"annotated_genes":["SJAG_01541"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68313],"is_not":false,"summary":null,"term":"GO:0036376"}]},"cv_name":"biological_process","definition":"The directed movement of sodium ions from inside of a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["PMID:14674689","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transport","termid":"GO:0035725"},{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01541":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"sodium ion export across plasma membrane","references_by_uniquename":{"GO_REF:0000002":null},"secondary_identifiers":["GO:0098667","GO:0071436"],"synonyms":[{"name":"sodium export","type":"related"},{"name":"sodium ion export","type":"related"},{"name":"sodium ion export from cell","type":"exact"}],"termid":"GO:0036376","terms_by_termid":{"GO:0036376":null}}


id: GO:0170040
data:
  {"annotated_genes":["SJAG_03861","SJAG_00944","SJAG_02901","SJAG_00495","SJAG_03398","SJAG_00714","SJAG_03671","SJAG_00937","SJAG_03641","SJAG_03434","SJAG_02450","SJAG_01903","SJAG_04145","SJAG_02235"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98226,75916,79794],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019464"},{"annotations":[70209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042853"},{"annotations":[80147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019544"},{"annotations":[115060,80145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010121"},{"annotations":[72618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006533"},{"annotations":[115793],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019450"},{"annotations":[81367,93524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006538"},{"annotations":[71996,79870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010133"},{"annotations":[73863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006567"},{"annotations":[74829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006574"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any amino acid that is incorporated into protein naturally by ribosomal translation of mRNA, and that has a specific codon for translation from mRNA to protein.","definition_xrefs":["GOC:ew"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"proteinogenic amino acid metabolic process","termid":"GO:0170039"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00495":null,"SJAG_00714":null,"SJAG_00937":null,"SJAG_00944":null,"SJAG_01903":null,"SJAG_02235":null,"SJAG_02450":null,"SJAG_02901":null,"SJAG_03398":null,"SJAG_03434":null,"SJAG_03641":null,"SJAG_03671":null,"SJAG_03861":null,"SJAG_04145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"proteinogenic amino acid catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"proteinogenic amino acid breakdown","type":"exact"},{"name":"proteinogenic amino acid catabolism","type":"exact"},{"name":"proteinogenic amino acid degradation","type":"exact"}],"termid":"GO:0170040","terms_by_termid":{"GO:0006533":null,"GO:0006538":null,"GO:0006567":null,"GO:0006574":null,"GO:0010121":null,"GO:0010133":null,"GO:0019450":null,"GO:0019464":null,"GO:0019544":null,"GO:0042853":null}}


id: GO:0097543
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Proximal part of the ciliary shaft to which the inversin protein (also called Inv) specifically localizes. The inversin compartment appears to have a different protein composition than the rest of the cilium, although there is no structure that separates it form the distal part of the cilium.","definition_xrefs":["PMID:19050042","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ciliary inversin compartment","synonyms":[{"name":"Inv compartment of the cilium","type":"exact"},{"name":"cilial inversin compartment","type":"exact"},{"name":"cilium inversin compartment","type":"exact"},{"name":"flagellar inversin compartment","type":"exact"},{"name":"flagellum inversin compartment","type":"exact"},{"name":"inversin compartment","type":"broad"}],"termid":"GO:0097543"}


id: PR:O94361
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 1-acyl-sn-glycerol-3-phosphate acyltransferase delta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized acyltransferase C428.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.14","secondary_identifiers":["UniProtKB:O94361"],"synonyms":[{"name":"Spom972h-AGPAT4","type":"exact"}],"termid":"PR:O94361"}


id: PBO:0060135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 36","termid":"PBO:0060135"}


id: PBO:0080842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 1 pseudogene 6","termid":"PBO:0080842"}


id: PBO:0068623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 3, pseudogene","termid":"PBO:0068623"}


id: PR:O13612
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nep2 gene.","definition_xrefs":["UniProtKB:O13612","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8-specific protease 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32H8.02c","synonyms":[{"name":"Spom972h-nep2","type":"exact"},{"name":"meiotically up-regulated gene 120 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13612"}


id: MONDO:0005767
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A severe condition resulting from bacteria invading healthy muscle from adjacent traumatized muscle or soft tissue. The infection originates in a wound contaminated with bacteria of the genus clostridium. C. perfringens accounts for the majority of cases (over eighty percent), while C. noyvi, C. septicum, and C. histolyticum cause most of the other cases.","definition_xrefs":["MESH:D005738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"commensal bacterial infectious disease","termid":"MONDO:0000315"},{"relation_name":"is_a","term_name":"bacterial infectious disease with sepsis","termid":"MONDO:0005229"},{"relation_name":"is_a","term_name":"vesiculobullous skin disease","termid":"MONDO:0006617"},{"relation_name":"is_a","term_name":"infection due to clostridium perfringens","termid":"MONDO:0023149"},{"relation_name":"is_a","term_name":"skin disease caused by bacterial infection","termid":"MONDO:0024295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"gas gangrene","secondary_identifiers":["MEDGEN:8959","ICD9:040.0","icd11.foundation:1920227791","DOID:9159","ICD10CM:A48.0","SCTID:80466000","EFO:0007279","UMLS:C0017105"],"synonyms":[{"name":"gas bacillus infection","type":"exact"},{"name":"gas gangrene","type":"exact"},{"name":"myonecrosis","type":"exact"}],"termid":"MONDO:0005767","xrefs":{"Monarch":{"xref_id":"0005767"}}}


id: GO:0036029
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that contains protein C inhibitor (SERPINA5) and prostate-specific antigen (KLK3); formation of the complex inhibits the serine protease activity of prostate-specific antigen.","definition_xrefs":["PMID:1725227","GOC:ans"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine protease inhibitor complex","termid":"GO:0097180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein C inhibitor-KLK3 complex","synonyms":[{"name":"PCI-KLK3 complex","type":"exact"},{"name":"SERPINA5-KLK3 complex","type":"exact"},{"name":"plasma serine protease inhibitor-KLK3 complex","type":"exact"},{"name":"protein C inhibitor-kallikrein-3 complex","type":"exact"},{"name":"protein C inhibitor-prostate-specific antigen complex","type":"exact"},{"name":"serpin A5-KLK3 complex","type":"exact"}],"termid":"GO:0036029"}


id: GO:0071363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a growth factor stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to growth factor","termid":"GO:0070848"},{"relation_name":"is_a","term_name":"cellular response to endogenous stimulus","termid":"GO:0071495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to growth factor stimulus","termid":"GO:0071363"}


id: GO:0050963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which an electrical stimulus is received by a cell and converted into a molecular signal as part of sensory perception.","definition_xrefs":["GOC:ai","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of stimulus involved in sensory perception","termid":"GO:0050906"},{"relation_name":"is_a","term_name":"detection of electrical stimulus","termid":"GO:0050981"},{"relation_name":"part_of","term_name":"sensory perception of electrical stimulus","termid":"GO:0050952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of electrical stimulus involved in sensory perception","synonyms":[{"name":"sensory detection of electrical stimulus","type":"exact"},{"name":"sensory detection of electrical stimulus during sensory perception","type":"exact"},{"name":"sensory perception, sensory detection of electrical stimulus","type":"exact"},{"name":"sensory perception, sensory transduction of electrical stimulus","type":"exact"},{"name":"sensory transduction of electrical stimulus","type":"exact"},{"name":"sensory transduction of electrical stimulus during sensory perception","type":"exact"}],"termid":"GO:0050963"}


id: PR:O14161
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cwf21 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.09c","synonyms":[{"name":"Spom972h-cwf21","type":"exact"},{"name":"complexed with cdc5 protein 21 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14161"}


id: MONDO:1011134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pneumothorax that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pneumothorax, non-human animal","termid":"MONDO:1010286"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pneumothorax, domestic cat","secondary_identifiers":["OMIA:000804-9685"],"termid":"MONDO:1011134","xrefs":{"Monarch":{"xref_id":"1011134"}}}


id: PR:P20772
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A trifunctional purine biosynthetic protein adenosine-3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03581","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bifunctional purine biosynthetic protein ADE1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC405.01","secondary_identifiers":["UniProtKB:P20772"],"synonyms":[{"name":"Spom972h-GART","type":"exact"}],"termid":"PR:P20772"}


id: PBO:0039032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with GTPase domain, ankyrin repeat and PH domain 9","termid":"PBO:0039032"}


id: PBO:0017054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsp70 nucleotide exchange factor Fes1 (predicted)","termid":"PBO:0017054"}


id: MONDO:0002036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder that affects the penis. Representative examples of non-neoplastic disorders include phimosis, balanitis, and hypospadias. Representative examples of neoplastic disorders include hemangioma, penile intraepithelial neoplasia, and penile carcinoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male reproductive system disorder","termid":"MONDO:0003150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"penile disorder","secondary_identifiers":["DOID:1529","UMLS:C0030846","MEDGEN:10627","SCTID:33958003","ICD9:607.8","MESH:D010409","NCIT:C26846","ICD9:607.89","ICD9:607.9"],"synonyms":[{"name":"disease of penis","type":"exact"},{"name":"disease or disorder of penis","type":"exact"},{"name":"disorder of penis","type":"exact"},{"name":"penile disease","type":"exact"},{"name":"penile disorder","type":"exact"},{"name":"penis disease","type":"exact"},{"name":"penis disease or disorder","type":"exact"}],"termid":"MONDO:0002036","xrefs":{"Monarch":{"xref_id":"0002036"}}}


id: PBO:0088413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extracellular leucine-rich repeat domain, receptor L domain-like Ecm33","termid":"PBO:0088413"}


id: PATO:0015003
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A decrease in the ability of a process to produce its output.","definition_xrefs":["PATOC:PortlandMeetingFeb2015"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased process quality","termid":"PATO:0002302"},{"relation_name":"is_a","term_name":"process efficacy","termid":"PATO:0015002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased efficacy","termid":"PATO:0015003"}


id: GO:0060512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a prostate gland are generated and organized.","definition_xrefs":["PMID:18977204","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"gland morphogenesis","termid":"GO:0022612"},{"relation_name":"part_of","term_name":"prostate gland development","termid":"GO:0030850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prostate gland morphogenesis","termid":"GO:0060512"}


id: GO:0061663
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of NEDD8 to a substrate protein via the reaction X-NEDD8 + S = X + S-NEDD8, where X is either an E2 or E3 enzyme, the X-NEDD8 linkage is a thioester bond, and the S-NEDD8 linkage is an isopeptide bond between the C-terminal amino acid of NEDD8 and the epsilon-amino group of lysine residues in the substrate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NEDD8 transferase activity","termid":"GO:0019788"},{"relation_name":"is_a","term_name":"ubiquitin-like protein ligase activity","termid":"GO:0061659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0019787"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0140096","GO:0019787","GO:0003674"],"is_obsolete":false,"name":"NEDD8 ligase activity","synonyms":[{"name":"E3","type":"broad"}],"termid":"GO:0061663"}


id: MONDO:0004368
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the sphenoorbital region.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skull base meningioma","termid":"MONDO:0002998"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphenoorbital meningioma","secondary_identifiers":["MEDGEN:233458","NCIT:C5285","UMLS:C1336040","DOID:7819"],"termid":"MONDO:0004368","xrefs":{"Monarch":{"xref_id":"0004368"}}}


id: MONDO:0023833
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multifocal choroiditis (MFC) is an inflammatory disorder characterized by swelling of the eye (called uveitis) and multiple lesions in the choroid, a layer of blood vessels between the white of the eye and the retina. Symptoms include blurry vision, floaters, sensitivity to light, blind spots and mild eye discomfort. Though the cause is unknown, multifocal choroiditis is seen most frequently in women ages 20 to 60, and usually affects both eyes. MFC is generally treated with steroid medication that can be taken orally or injected into the eye. Multifocal choroiditis is a chronic condition, thus symptoms may return or worsen even after successful treatment.","definition_xrefs":["GARD:0009824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choroiditis","termid":"MONDO:0001280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"multifocal choroiditis","secondary_identifiers":["MESH:C537374","SCTID:414783007","UMLS:C1533060","MEDGEN:288551","GARD:9824","icd11.foundation:1197219411","MESH:D000080364"],"termid":"MONDO:0023833","xrefs":{"Monarch":{"xref_id":"0023833"}}}


id: MONDO:0023415
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A fungal infection by any of the Candida species that is present at birth.","definition_xrefs":["NCIT:C116811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"candidiasis","termid":"MONDO:0002026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital candidiasis","secondary_identifiers":["MEDGEN:575892","SCTID:276672007","UMLS:C0343875"],"synonyms":[{"name":"Congenital Candidiasis","type":"related"},{"name":"Congenital candidiasis","type":"related"},{"name":"Congenital candidosis","type":"related"},{"name":"congenital candidiasis","type":"exact"}],"termid":"MONDO:0023415","xrefs":{"Monarch":{"xref_id":"0023415"}}}


id: PBO:0029534
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_normal_volume_spheroid_cells_(obsolete_FYPO:0002188)","termid":"PBO:0029534"}


id: PBO:0004254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"m7G(5')pppN diphosphatase (predicted)","termid":"PBO:0004254"}


id: PBO:0089348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial sorting and assembly machinery complex subunit Sam50","termid":"PBO:0089348"}


id: PBO:0089887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspan protein, claudin Dni1","termid":"PBO:0089887"}


id: FYPO:0005446
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a specific molecular function is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abolished molecular function","synonyms":[{"name":"molecular function abolished","type":"exact"}],"termid":"FYPO:0005446"}


id: MONDO:0011433
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anemia, congenital hypoplastic, with multiple congenital anomalies/intellectual disability syndrome","secondary_identifiers":["MESH:C565796","OMIM:604315","MEDGEN:388087","UMLS:C1858537"],"synonyms":[{"name":"anemia, congenital hypoplastic, with multiple congenital anomalies/intellectual disability syndrome","type":"exact"},{"name":"anemia, congenital hypoplastic, with multiple congenital anomalies/mental retardation syndrome","type":"exact"}],"termid":"MONDO:0011433","xrefs":{"Monarch":{"xref_id":"0011433"}}}


id: MONDO:0000547
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ovarian serous carcinoma (obsolete MONDO:0000547)","termid":"MONDO:0000547","xrefs":{"Monarch":{"xref_id":"0000547"}}}


id: MONDO:1010106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple acyl-coa dehydrogenase deficiency that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrophic cardiomyopathy, non-human animal","termid":"MONDO:1010015"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis, non-human animal","termid":"MONDO:1011310"},{"relation_name":"is_a","term_name":"mitochondrial disease, non-human animal","termid":"MONDO:1011332"},{"relation_name":"is_a","term_name":"inborn errors of metabolism, non-human animal","termid":"MONDO:1012979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple acyl-coa dehydrogenase deficiency, non-human animal","secondary_identifiers":["OMIA:001457"],"termid":"MONDO:1010106","xrefs":{"Monarch":{"xref_id":"1010106"}}}


id: GO:0086074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of an Purkinje myocyte to a ventricular cardiac muscle cell via adhesion molecules that results in the cells being juxtaposed so that they can communicate.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterotypic cell-cell adhesion","termid":"GO:0034113"},{"relation_name":"is_a","term_name":"cardiac muscle cell-cardiac muscle cell adhesion","termid":"GO:0086042"},{"relation_name":"part_of","term_name":"Purkinje myocyte to ventricular cardiac muscle cell communication","termid":"GO:0086068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"Purkinje myocyte-ventricular cardiac muscle cell adhesion involved in cell communication","termid":"GO:0086074"}


id: GO:0031204
data:
  {"annotated_genes":["SJAG_00959","SJAG_00064","SJAG_03396","SJAG_02354","SJAG_02588"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74905,81991,99145,99861,110150],"is_not":false,"summary":null,"term":"GO:0031204"}]},"cv_name":"biological_process","definition":"The process in which a protein translocates through the ER membrane posttranslationally.","definition_xrefs":["PMID:12518317","PMID:8707814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transmembrane transport","termid":"GO:0065002"},{"relation_name":"part_of","term_name":"post-translational protein targeting to endoplasmic reticulum membrane","termid":"GO:0006620"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00959":null,"SJAG_02354":null,"SJAG_02588":null,"SJAG_03396":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810","GO:0006605"],"is_obsolete":false,"name":"post-translational protein targeting to membrane, translocation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"posttranslational protein membrane targeting, translocation","type":"exact"},{"name":"posttranslational protein targeting to membrane, translocation","type":"exact"},{"name":"protein translocation during posttranslational protein targeting to membrane","type":"exact"}],"termid":"GO:0031204","terms_by_termid":{"GO:0031204":null}}


id: MONDO:0850347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sarcomatoid transitional cell carcinoma that is located in the bladder.","definition_xrefs":["DOID:0080901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcomatoid transitional cell carcinoma","termid":"MONDO:0002837"},{"relation_name":"is_a","term_name":"bladder transitional cell carcinoma","termid":"MONDO:0005611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bladder sarcomatoid transitional cell carcinoma","termid":"MONDO:0850347","xrefs":{"Monarch":{"xref_id":"0850347"}}}


id: FYPO:0008366
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of heterochromatin maintenance is shorter than normal.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin organization during vegetative growth","termid":"FYPO:0004543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000641"],"is_obsolete":false,"name":"decreased duration of heterochromatin maintenance","termid":"FYPO:0008366"}


id: PBO:0084595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YJL017W was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YJL016W","termid":"PBO:0084595"}


id: PBO:0004529
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine (K) and glutamic acid (E) Rich protein","termid":"PBO:0004529"}


id: PBO:0085598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in calcium homeostasis and exit from quiescence; required for proper trehalose levels during quiescence; may play a role in cell wall biosynthesis, mutants are hypersensitive to antifungal, Papulacandin B; null mutants have increased plasmid loss; interacts with Pdr5p","termid":"PBO:0085598"}


id: PBO:0057862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3173","termid":"PBO:0057862"}


id: MONDO:0014341
data:
  {"annotated_genes":["SJAG_04003"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88426],"is_not":false,"summary":null,"term":"MONDO:0014341"}]},"cv_name":"mondo","definition":"Any complex cortical dysplasia with other brain malformations in which the cause of the disease is a mutation in the TUBB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex cortical dysplasia with other brain malformations","termid":"MONDO:0000904"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04003":null},"genotype_count":0,"is_obsolete":false,"name":"complex cortical dysplasia with other brain malformations 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:862720","OMIM:615771","DOID:0090136","UMLS:C4014283"],"synonyms":[{"name":"CDCBM56","type":"exact"},{"name":"CDCBM6","type":"related"},{"name":"TUBB complex cortical dysplasia with other brain malformations","type":"exact"},{"name":"complex cortical dysplasia with other brain malformations caused by mutation in TUBB","type":"exact"},{"name":"complex cortical dysplasia with other brain malformations type 6","type":"exact"},{"name":"cortical dysplasia, Complex, with Other brain malformations type 6","type":"exact"},{"name":"cortical dysplasia, complex, with other brain malformations 6","type":"related"}],"termid":"MONDO:0014341","terms_by_termid":{"MONDO:0014341":null},"xrefs":{"Monarch":{"xref_id":"0014341"}}}


id: PBO:0067396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 502, pseudogene","termid":"PBO:0067396"}


id: PBO:0075624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPRING1 pseudogene 1","termid":"PBO:0075624"}


id: MONDO:0019537
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemoglobin D disease(HbD) is a hemoglobinopathy characterized by production of abnormal variant hemoglobin known as hemoglobin D, with no or mild clinical manifestations (splenomegaly, very mild anemia).","definition_xrefs":["Orphanet:90039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"},{"relation_name":"is_a","term_name":"inherited hemoglobinopathy","termid":"MONDO:0019050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"hemoglobin D disease","secondary_identifiers":["DOID:5378","ICD9:282.7","MedDRA:10055019","MEDGEN:124416","SCTID:66729008","UMLS:C0272080","icd11.foundation:1508363690","NCIT:C35344","GARD:19103"],"synonyms":[{"name":"Hb-D disease","type":"exact"},{"name":"hemoglobin D disease","type":"exact"}],"termid":"MONDO:0019537","xrefs":{"Monarch":{"xref_id":"0019537"}}}


id: MONDO:0100061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A peripheral neuropathy that is characterized by variants in PRPS1, which causes decreased or impaired function of the PRPS1 enzyme, and presents as a range of peripheral neuropathies that can include features of Charcot-Marie Tooth syndrome, Arts syndrome, or nonsyndromic hearing loss.","definition_xrefs":["PMID:25182139","PMID:25785835","PMID:27256512","PMID:20021999","PMID:25491489","PMID:17701900","PMID:27886419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"PRPS1 deficiency disorder","synonyms":[{"name":"PRPS1 deficiency disorder","type":"exact"},{"name":"PRPS1-related CMTX5/Arts syndrome/XLNSHL","type":"exact"}],"termid":"MONDO:0100061","xrefs":{"Monarch":{"xref_id":"0100061"}}}


id: GO:0034806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: benzo(a)pyrene + O2 = benzo(a)pyrene-cis-11,12-dihydrodiol.","definition_xrefs":["UM-BBD_reactionID:r1124"],"gene_count":0,"genotype_count":0,"name":"obsolete benzo(a)pyrene 11,12-dioxygenase activity (obsolete GO:0034806)","termid":"GO:0034806"}


id: PBO:0089456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTH/VHS domain protein Ent3","termid":"PBO:0089456"}


id: GO:1990567
data:
  {"annotated_genes":["SJAG_01599","SJAG_03126","SJAG_03500"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102117,113804,120086],"is_not":false,"summary":null,"term":"GO:1990567"}]},"cv_name":"cellular_component","definition":"A protein serine/threonine phosphatase complex that in S. pombe consists of the proteins Dis2, Ppn1, and Swd22.","definition_xrefs":["PMID:24945319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase complex","termid":"GO:0008287"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01599":null,"SJAG_03126":null,"SJAG_03500":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"DPS complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990567","terms_by_termid":{"GO:1990567":null}}


id: FYPO:0007784
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to protein aggregate centers is decreased. Protein aggregate centers are composed of chaperones and misfolded proteins, and are reversibly formed in the nucleus and cytosol to shield thermosensitive proteins from degradation until conditions allow disaggregation and refolding.","definition_xrefs":["PMID:32075773","PMID:33946513","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to protein aggregate center","synonyms":[{"name":"decreased protein localisation to protein aggregate centre","type":"exact"},{"name":"decreased protein localization to PAC","type":"exact"},{"name":"decreased protein localization to PACs","type":"exact"},{"name":"decreased protein localization to protein aggregate center during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to protein aggregate center during vegetative growth","type":"exact"},{"name":"reduced protein localization to protein aggregate center","type":"exact"}],"termid":"FYPO:0007784"}


id: MONDO:0016416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"male reproductive system disorder","termid":"MONDO:0003150"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphallia","secondary_identifiers":["Orphanet:227","GARD:1872","icd11.foundation:1465839134","ICD9:752.69","UMLS:C0345322","SCTID:253851000","MEDGEN:450542"],"synonyms":[{"name":"Diphallus","type":"related"}],"termid":"MONDO:0016416","xrefs":{"Monarch":{"xref_id":"0016416"}}}


id: FYPO:0000608
data:
  {"alleles_by_uniquename":{"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"}],"single_locus_phenotype":[{"annotations":[121069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested in M phase under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abnormal mitosis","termid":"FYPO:0000337"},{"relation_name":"is_a","term_name":"abnormally arrested mitotic cell cycle progression","termid":"FYPO:0000502"},{"relation_name":"is_a","term_name":"abnormal mitotic M phase progression","termid":"FYPO:0000607"},{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00871":null,"SJAG_04284":null,"SJAG_04464":null},"genotype_count":2,"genotypes_by_uniquename":{"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut3-T19E(aa) pim1-R152C(aa)","display_uniquename":"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00871:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_00871","SJAG_04464"],"name":"abnormal cell cycle arrest in mitotic M phase","references_by_uniquename":{"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_04284"],"single_locus_genotype_uniquenames":["nup61delta"],"synonyms":[{"name":"abnormal cell cycle arrest in M phase during mitotic cell cycle","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic M phase during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle arrest in M phase","type":"exact"},{"name":"abnormal mitotic cell cycle arrest with condensed chromosomes","type":"related"},{"name":"abnormal mitotic nuclear division arrest","type":"exact"},{"name":"mitotic cell cycle arrest in M-phase","type":"exact"},{"name":"mitotic cell cycle progression in M phase: arrested","type":"related"}],"termid":"FYPO:0000608","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000619":null,"FYPO_EXT:0000001":null}}


id: GO:0034101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process of regulating the production and elimination of erythrocytes within an organism.","definition_xrefs":["PMID:10694114","GOC:add","PMID:14754397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid cell homeostasis","termid":"GO:0002262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"erythrocyte homeostasis","synonyms":[{"name":"RBC homeostasis","type":"exact"},{"name":"red blood cell homeostasis","type":"exact"}],"termid":"GO:0034101"}


id: GO:0034073
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tetrahymanol = squalene + H2O.","definition_xrefs":["RHEA:30675","PMID:18033581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squalene cyclase activity","termid":"GO:0034072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0009975"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0009975"],"is_obsolete":false,"name":"tetrahymanol synthase activity","secondary_identifiers":["EC:4.2.1.123"],"synonyms":[{"name":"squalene--tetrahymanol cyclase activity","type":"exact"},{"name":"tetrahymanol cyclase activity","type":"exact"}],"termid":"GO:0034073"}


id: PR:Q9USP0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC11E10.07c gene.","definition_xrefs":["UniProtKB:Q9USP0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF-2B subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC11E10.07c","synonyms":[{"name":"Spom972h-SPCC11E10.07c","type":"exact"},{"name":"eIF-2B GDP-GTP exchange factor subunit alpha (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USP0"}


id: PBO:0071111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 113","termid":"PBO:0071111"}


id: GO:0097263
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: eoxin D4 + H20 = eoxin E4 + glycine.","definition_xrefs":["GOC:mw","PMID:18184802","PMID:18647347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exopeptidase activity","termid":"GO:0008238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0008233","GO:0140096","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"eoxin E4 synthase activity","secondary_identifiers":["Reactome:R-HSA-2161868"],"termid":"GO:0097263"}


id: PBO:0030915
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_vegetative_growth","termid":"PBO:0030915"}


id: MONDO:0008820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete arthrogryposis, distal, with hypopituitarism, intellectual disability, and facial anomalies (obsolete MONDO:0008820)","termid":"MONDO:0008820","xrefs":{"Monarch":{"xref_id":"0008820"}}}


id: PBO:0035881
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_protein_transport_during_vegetative_growth","termid":"PBO:0035881"}


id: PATO:0002182
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality which inheres in a molecular entity, a single molecule, atom, ion, radical etc.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical object quality","termid":"PATO:0001241"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molecular quality","secondary_identifiers":["PATO:0002061"],"synonyms":[{"name":"relational molecular quality","type":"exact"}],"termid":"PATO:0002182"}


id: GO:2000063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ureter smooth muscle cell differentiation.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:obol","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of smooth muscle cell differentiation","termid":"GO:0051152"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of ureter smooth muscle cell differentiation","termid":"GO:2000061"},{"relation_name":"positively_regulates","term_name":"ureter smooth muscle cell differentiation","termid":"GO:0072193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ureter smooth muscle cell differentiation","termid":"GO:2000063"}


id: FYPO:0000618
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121456,121457,121458],"is_not":false,"summary":null,"term":"FYPO:0000618"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of progression through anaphase of mitosis is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic anaphase progression","termid":"FYPO:0000616"},{"relation_name":"is_a","term_name":"increased duration of mitotic cell cycle phase","termid":"FYPO:0001069"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":3,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of mitotic anaphase","references_by_uniquename":{"PMID:23786411":null},"secondary_identifiers":["FYPO:0000617"],"single_locus_annotated_genes":["SJAG_03575","SJAG_01956","SJAG_03351"],"single_locus_genotype_uniquenames":["apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"delayed mitotic anaphase progression","type":"related"},{"name":"increased duration of anaphase during mitotic cell cycle","type":"exact"},{"name":"increased duration of mitotic anaphase during vegetative growth","type":"exact"},{"name":"increased duration of mitotic anaphase progression","type":"exact"},{"name":"mitotic cell cycle progression in anaphase: delayed","type":"related"},{"name":"mitotic cell cycle progression in anaphase: increased duration","type":"related"},{"name":"prolonged mitotic anaphase","type":"exact"}],"termid":"FYPO:0000618","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0000618":null}}


id: PBO:0079616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 L1 (pseudogene)","termid":"PBO:0079616"}


id: MONDO:0033639
data:
  {"annotated_genes":["SJAG_02480"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87523],"is_not":false,"summary":null,"term":"MONDO:0033639"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex IV deficiency, nuclear-type","termid":"MONDO:0033885"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02480":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 4 deficiency, nuclear type 10","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16408","OMIM:619053","UMLS:C5436692","MEDGEN:1746545","DOID:0070496"],"synonyms":[{"name":"MC4DN10","type":"exact"},{"name":"mitochondrial complex IV deficiency, nuclear type 10","type":"exact"}],"termid":"MONDO:0033639","terms_by_termid":{"MONDO:0033639":null},"xrefs":{"Monarch":{"xref_id":"0033639"}}}


id: GO:1901774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lincomycin.","definition_xrefs":["GOC:yaf","MetaCyc:PWY-6955","PMID:8577249","UniPathway:UPA00161","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-glycoside biosynthetic process","termid":"GO:0016144"},{"relation_name":"is_a","term_name":"modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"lincomycin metabolic process","termid":"GO:1901772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"lincomycin biosynthetic process","synonyms":[{"name":"lincomycin anabolism","type":"exact"},{"name":"lincomycin biosynthesis","type":"exact"},{"name":"lincomycin formation","type":"exact"},{"name":"lincomycin synthesis","type":"exact"}],"termid":"GO:1901774"}


id: GO:0061328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the posterior Malpighian tubule over time, from its formation to the mature structure. The pair of posterior tubules arise from a ventrolateral region of the embryonic hindgut and project backwards through the body cavity. A Malpighian tubule is a fine, thin-walled excretory tubule in insects which connects with the posterior part of the gut.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Malpighian tubule development","termid":"GO:0072002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior Malpighian tubule development","termid":"GO:0061328"}


id: PBO:0049288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase alpha 7, pseudogene","termid":"PBO:0049288"}


id: PR:Q9P7B8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- arb1 gene.","definition_xrefs":["UniProtKB:Q9P7B8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argonaute-binding protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC140.03","synonyms":[{"name":"Spom972h-arb1","type":"exact"}],"termid":"PR:Q9P7B8"}


id: PBO:0081411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 263","termid":"PBO:0081411"}


id: PR:Q09762
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC24H6.08 gene.","definition_xrefs":["UniProtKB:Q09762","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24H6.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24H6.08","synonyms":[{"name":"Spom972h-SPAC24H6.08","type":"exact"}],"termid":"PR:Q09762"}


id: PBO:0044847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 131B","termid":"PBO:0044847"}


id: MONDO:0030331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Ritscher-Schinzel syndrome","termid":"MONDO:0019078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022","MONDO:0002320"],"is_obsolete":false,"name":"Ritscher-Schinzel syndrome 4","secondary_identifiers":["MEDGEN:1794149","OMIM:619435","UMLS:C5561939"],"synonyms":[{"name":"RTSC4","type":"exact"},{"name":"Ritscher-Schinzel syndrome 4","type":"exact"}],"termid":"MONDO:0030331","xrefs":{"Monarch":{"xref_id":"0030331"}}}


id: PBO:0066504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory factor X2","termid":"PBO:0066504"}


id: MONDO:0005011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A gastrointestinal disorder characterized by chronic inflammation involving all layers of the intestinal wall, noncaseating granulomas affecting the intestinal wall and regional lymph nodes, and transmural fibrosis. Crohn disease most commonly involves the terminal ileum; the colon is the second most common site of involvement.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"Crohn disease","secondary_identifiers":["NANDO:1200444","UMLS:C0010346","Orphanet:206","ICD9:555.1","MEDGEN:3664","NANDO:1200446","SCTID:34000006","DOID:8778","NANDO:2200921","ICD10CM:K50","EFO:0000384","NCIT:C2965","SCTID:7620006","icd11.foundation:1267652425","MESH:D003424"],"synonyms":[{"name":"Crohn disease","type":"exact"},{"name":"Crohn's disease","type":"exact"},{"name":"Crohn's disease of colon","type":"exact"},{"name":"Crohn's disease of large bowel","type":"exact"},{"name":"granulomatous colitis","type":"exact"},{"name":"paediatric Crohn's disease","type":"exact"},{"name":"pediatric Crohn's disease","type":"exact"},{"name":"regional enteritis","type":"exact"}],"termid":"MONDO:0005011","xrefs":{"Monarch":{"xref_id":"0005011"}}}


id: PBO:0069743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1024, pseudogene","termid":"PBO:0069743"}


id: GO:0060956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of an endocardial cell. An endocardial cell is a specialized endothelial cell that makes up the endocardium portion of the heart. The endocardium is the innermost layer of tissue of the heart, and lines the heart chambers.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac endothelial cell differentiation","termid":"GO:0003348"},{"relation_name":"part_of","term_name":"endocardium development","termid":"GO:0003157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cell differentiation","termid":"GO:0060956"}


id: PBO:0086810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YIR042C is a non-essential gene","termid":"PBO:0086810"}


id: GO:0033464
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GGG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0060090","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"GGG codon-amino acid adaptor activity","synonyms":[{"name":"glycine tRNA","type":"related"}],"termid":"GO:0033464"}


id: GO:0035745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that contributes to cytokine production by a T-helper 2 cell.","definition_xrefs":["CL:0000546","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell cytokine production","termid":"GO:0035743"},{"relation_name":"part_of","term_name":"type 2 immune response","termid":"GO:0042092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"T-helper 2 cell cytokine production","synonyms":[{"name":"Th2 cell cytokine production","type":"exact"}],"termid":"GO:0035745"}


id: MONDO:0016178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete peripheral neuropathy associated with monoclonal gammopathy (obsolete MONDO:0016178)","secondary_identifiers":["Orphanet:209010"],"termid":"MONDO:0016178","xrefs":{"Monarch":{"xref_id":"0016178"}}}


id: GO:0010523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate of the directed movement of calcium ions into the cytosol of a cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion transport into cytosol","termid":"GO:0010522"},{"relation_name":"is_a","term_name":"negative regulation of cytosolic calcium ion concentration","termid":"GO:0051481"},{"relation_name":"is_a","term_name":"negative regulation of calcium ion transmembrane transport","termid":"GO:1903170"},{"relation_name":"negatively_regulates","term_name":"calcium ion transport into cytosol","termid":"GO:0060402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"negative regulation of calcium ion transport into cytosol","termid":"GO:0010523"}


id: GO:0052610
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: beta-cryptoxanthin + a reduced electron acceptor + oxygen = zeaxanthin + an oxidized electron acceptor + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-cryptoxanthin hydroxylase activity (obsolete GO:0052610)","synonyms":[{"name":"beta-carotene hydroxylase activity","type":"broad"},{"name":"carotene beta-ring hydroxylase activity","type":"broad"}],"termid":"GO:0052610"}


id: MONDO:1010666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Scott Syndrome that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Scott Syndrome, non-human animal","termid":"MONDO:1010083"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Scott Syndrome, dog","secondary_identifiers":["OMIA:001353-9615"],"termid":"MONDO:1010666","xrefs":{"Monarch":{"xref_id":"1010666"}}}


id: PBO:0080239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 2","termid":"PBO:0080239"}


id: PBO:0044550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DAPK1 intronic transcript 1","termid":"PBO:0044550"}


id: PBO:0077294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 37","termid":"PBO:0077294"}


id: PBO:0087138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein that associates with polysomes; may be involved in regulating mRNA translation; involved in the copper-dependent mineralization of copper sulfide complexes on cell surface in cells cultured in copper salts; SLF1 has a paralog, SRO9, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0087138"}


id: GO:1900188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion involved in single-species biofilm formation.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-substrate adhesion","termid":"GO:0010812"},{"relation_name":"is_a","term_name":"regulation of cell adhesion involved in single-species biofilm formation","termid":"GO:1900187"},{"relation_name":"negatively_regulates","term_name":"cell adhesion involved in single-species biofilm formation","termid":"GO:0043709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of cell adhesion involved in single-species biofilm formation","synonyms":[{"name":"down regulation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"down regulation of cell adhesion involved in single-species biofilm formation","type":"exact"},{"name":"down-regulation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"down-regulation of cell adhesion involved in single-species biofilm formation","type":"exact"},{"name":"downregulation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"downregulation of cell adhesion involved in single-species biofilm formation","type":"exact"},{"name":"inhibition of cell adhesion during single-species biofilm formation","type":"related"},{"name":"inhibition of cell adhesion involved in single-species biofilm formation","type":"narrow"},{"name":"negative regulation of cell adhesion during single-species biofilm formation","type":"related"}],"termid":"GO:1900188"}


id: MONDO:0030014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive limb-girdle muscular dystrophy","termid":"MONDO:0015152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0006025"],"is_obsolete":false,"name":"muscular dystrophy, limb-girdle, autosomal recessive 26","secondary_identifiers":["OMIM:618848","UMLS:C5394268","MEDGEN:1718449"],"synonyms":[{"name":"LGMDR26","type":"exact"},{"name":"MUSCULAR DYSTROPHY, LIMB-GIRDLE, AUTOSOMAL RECESSIVE 26","type":"exact"},{"name":"muscular dystrophy, limb-girdle, autosomal recessive 26","type":"exact"}],"termid":"MONDO:0030014","xrefs":{"Monarch":{"xref_id":"0030014"}}}


id: PATO:0000119
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A 1-D extent quality inhering in a bearer by virtue of the bearer's vertical dimension of extension.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1-D extent","termid":"PATO:0001708"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"height","termid":"PATO:0000119"}


id: PBO:0057805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3127","termid":"PBO:0057805"}


id: PBO:0069325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 583, pseudogene","termid":"PBO:0069325"}


id: MONDO:0001822
data:
  {"annotated_genes":["SJAG_03162","SJAG_00906"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009528"},{"annotations":[87206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009515"}]},"cv_name":"mondo","definition":"Conditions with abnormally low levels of lipoproteins in the blood. This may involve any of the lipoprotein subclasses, including alpha-lipoproteins (high-density lipoproteins); beta-lipoproteins (low-density lipoproteins); and prebeta-lipoproteins (very-low-density lipoproteins).","definition_xrefs":["MESH:D007009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00906":null,"SJAG_03162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"hypolipoproteinemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0020623","MEDGEN:6982","ICD9:272.5","HP:0010981","DOID:1387","GARD:8394","SCTID:363140000"],"synonyms":[{"name":"hypolipoproteinaemia","type":"exact"},{"name":"hypolipoproteinemia","type":"exact"},{"name":"hypolipoproteinemia (disease)","type":"exact"},{"name":"lipoprotein deficiencies","type":"related"}],"termid":"MONDO:0001822","terms_by_termid":{"MONDO:0009515":null,"MONDO:0009528":null},"xrefs":{"Monarch":{"xref_id":"0001822"}}}


id: PBO:0028719
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_monopolar_index","termid":"PBO:0028719"}


id: PBO:0061984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily B member 3","termid":"PBO:0061984"}


id: MONDO:0020233
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dentocutaneous disease with cataract (obsolete MONDO:0020233)","secondary_identifiers":["Orphanet:98649"],"termid":"MONDO:0020233","xrefs":{"Monarch":{"xref_id":"0020233"}}}


id: MONDO:0016040
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Harlequin syndrome (HSD) is an autonomic disorder occurring at any age and characterized by unilateral flushing and sweating, involving the face and sometimes arm and chest, in condition of thermal, exercise or emotional stress without sympathetic ocular manifestations. However, tonic pupils, parasympathetic oculomotor lesion and pre- or postganglionic sudomotor sympathetic deficit can rarely occur.","definition_xrefs":["Orphanet:199282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autonomic nervous system disorder","termid":"MONDO:0001292"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"harlequin syndrome","secondary_identifiers":["MESH:C535634","UMLS:C2029348","ICD9:705.89","GARD:8610","SCTID:14070001000004105","MEDGEN:384475"],"synonyms":[{"name":"progressive isolated segmental anhidrosis","type":"exact"},{"name":"sudden onset of unilateral flushing and sweating","type":"related"},{"name":"unilateral loss of facial flushing and sweating with contralateral anhidrosis","type":"related"}],"termid":"MONDO:0016040","xrefs":{"Monarch":{"xref_id":"0016040"}}}


id: PBO:0066113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS guanyl releasing protein 4","termid":"PBO:0066113"}


id: MONDO:0007507
data:
  {"annotated_genes":["SJAG_01938","SJAG_01878","SJAG_02698"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89027,89028,89029],"is_not":false,"summary":null,"term":"MONDO:0007507"}]},"cv_name":"mondo","definition":"Absence of fingerprints-congenital milia syndrome is characterized by neonatal blisters and milia (small white papules, especially on the face) and congenital absence of dermatoglyphics on the hands and feet. It has been reported in two kindreds (one of which contained 13 affected individuals spanning three generations) and in an unrelated individual. Some affected patients also showed bilateral partial flexion contractures of the fingers and toes, and webbing of the toes. The syndrome is inherited as an autosomal dominant trait.","definition_xrefs":["Orphanet:1658"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal disease","termid":"MONDO:0019268"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01878":null,"SJAG_01938":null,"SJAG_02698":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"absence of fingerprints-congenital milia syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080725","icd11.foundation:1298640608","SCTID:239011004","MEDGEN:140808","MESH:C537659","OMIM:129200","UMLS:C0406707","GARD:2336"],"synonyms":[{"name":"Baird syndrome","type":"exact"},{"name":"Basan syndrome","type":"related"},{"name":"absence of dermatoglyphics congenital milia","type":"related"},{"name":"absence of dermatoglyphics-congenital milia syndrome","type":"exact"},{"name":"absence of fingerprints congenital milia","type":"related"},{"name":"adermatoglyphia with congenital facial milia and acral blisters, digital contractures, and nail abnormalities","type":"related"},{"name":"ectodermal dysplasia, absent dermatoglyphic pattern, changes in nails, and Simian Crease","type":"related"}],"termid":"MONDO:0007507","terms_by_termid":{"MONDO:0007507":null},"xrefs":{"Monarch":{"xref_id":"0007507"}}}


id: PBO:0065589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha pseudogene 5","termid":"PBO:0065589"}


id: GO:0072134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a nephrogenic mesenchymal tissue are generated and organized. Nephrogenic mesenchyme is the tissue made up of loosely connected mesenchymal cells in the nephron.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney mesenchyme morphogenesis","termid":"GO:0072131"},{"relation_name":"part_of","term_name":"nephrogenic mesenchyme development","termid":"GO:0072076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephrogenic mesenchyme morphogenesis","termid":"GO:0072134"}


id: PR:O94539
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pam17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"presequence translocated-associated motor subunit pam17, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC167.04","synonyms":[{"name":"Spom972h-pam17","type":"exact"}],"termid":"PR:O94539"}


id: FYPO:0001473
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of tacrolimus than normal when the cells are subject to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to tacrolimus","termid":"FYPO:0001379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0002682","FYPO:0000003"],"is_obsolete":false,"name":"resistance to tacrolimus during salt stress","synonyms":[{"name":"resistance to FK506 during salt stress","type":"exact"},{"name":"resistance to salt stress and tacrolimus","type":"exact"},{"name":"resistance to tacrolimus and salt stress","type":"exact"},{"name":"resistance to tacrolimus during salt stress during mitotic cell cycle","type":"related"},{"name":"resistance to tacrolimus during salt stress during vegetative growth","type":"exact"},{"name":"resistant to tacrolimus during salt stress","type":"exact"}],"termid":"FYPO:0001473"}


id: MONDO:0100179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing Hirschsprung disease.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hirschsprung disease, susceptibility to","termid":"MONDO:0100179","xrefs":{"Monarch":{"xref_id":"0100179"}}}


id: MONDO:0017869
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chondroectodermal dysplasia with night blindness is a rare genetic bone development disorder characterized by proportionate short stature, nail dysplasia (enlarged, convex, hypertrophic nails), hypodontia and night blindness. Osteopenia, a tendency to present fractures, talipes varus with abnormal gait, ear infections, and watering eyes due to narrow tear ducts are frequently associated. Radiologically patients present delayed bone age on wrist X-rays, platyspondyly, and broad metaphyses of humeri with dense and thickened growth plates.","definition_xrefs":["Orphanet:319195"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005328"],"is_obsolete":false,"name":"chondroectodermal dysplasia with night blindness","secondary_identifiers":["GARD:21408","UMLS:C4706300","MEDGEN:1641815"],"termid":"MONDO:0017869","xrefs":{"Monarch":{"xref_id":"0017869"}}}


id: GO:0032061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate of translation as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation in response to stress","termid":"GO:0032055"},{"relation_name":"is_a","term_name":"regulation of translation in response to osmotic stress","termid":"GO:0043557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of translation in response to osmotic stress","synonyms":[{"name":"down regulation of translation in response to osmotic stress","type":"exact"},{"name":"down-regulation of translation in response to osmotic stress","type":"exact"},{"name":"downregulation of translation in response to osmotic stress","type":"exact"},{"name":"inhibition of translation in response to osmotic stress","type":"narrow"}],"termid":"GO:0032061"}


id: MONDO:0033556
data:
  {"annotated_genes":["SJAG_00831"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87033],"is_not":false,"summary":null,"term":"MONDO:0033556"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy, type B","termid":"MONDO:0000172"},{"relation_name":"is_a","term_name":"DPM3-congenital disorder of glycosylation","termid":"MONDO:0013049"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00831":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336","MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy (congenital with impaired intellectual development), type B, 15","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618992","MEDGEN:1755743","UMLS:C5436552","DOID:0112376"],"synonyms":[{"name":"MDDGB15","type":"related"},{"name":"MUSCULAR DYSTROPHY-DYSTROGLYCANOPATHY (CONGENITAL WITH IMPAIRED INTELLECTUAL DEVELOPMENT), TYPE B, 15","type":"related"},{"name":"muscular dystrophy, congenital, DPM3-related","type":"related"}],"termid":"MONDO:0033556","terms_by_termid":{"MONDO:0033556":null},"xrefs":{"Monarch":{"xref_id":"0033556"}}}


id: PBO:0036161
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_microtubule_polymerization","termid":"PBO:0036161"}


id: PR:G2TRN2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- new9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRN2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein new9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC926.10","synonyms":[{"name":"Spom972h-new9","type":"exact"}],"termid":"PR:G2TRN2"}


id: GO:0015103
data:
  {"annotated_genes":["SJAG_00612","SJAG_00671","SJAG_01183","SJAG_04241","SJAG_00547","SJAG_03401","SJAG_01973","SJAG_01168","SJAG_01059","SJAG_02463","SJAG_01941","SJAG_00233","SJAG_01033"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046715"},{"annotations":[104678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"},{"annotations":[71974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080139"},{"annotations":[72157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005254"},{"annotations":[80854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903425"},{"annotations":[118367,72619,73972,114586,80613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005315"},{"annotations":[75154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015379"},{"annotations":[67100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008271"},{"annotations":[57686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005452"},{"annotations":[75623,90232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015116"},{"annotations":[90233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015117"}]},"cv_name":"molecular_function","definition":"Enables the transfer of inorganic anions from one side of a membrane to the other. Inorganic anions are atoms or small molecules with a negative charge which do not contain carbon in covalent linkage.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic molecular entity transmembrane transporter activity","termid":"GO:0015318"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00233":null,"SJAG_00547":null,"SJAG_00612":null,"SJAG_00671":null,"SJAG_01033":null,"SJAG_01059":null,"SJAG_01168":null,"SJAG_01183":null,"SJAG_01941":null,"SJAG_01973":null,"SJAG_02463":null,"SJAG_03401":null,"SJAG_04241":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"inorganic anion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0015103","terms_by_termid":{"GO:0005254":null,"GO:0005315":null,"GO:0005452":null,"GO:0008271":null,"GO:0015116":null,"GO:0015117":null,"GO:0015379":null,"GO:0046715":null,"GO:0080139":null,"GO:0140987":null,"GO:1903425":null}}


id: PBO:0045919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EFCAB13 divergent transcript","termid":"PBO:0045919"}


id: GO:0034971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of a methyl group to arginine at position 17 of the histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-R17 methylation (obsolete GO:0034971)","synonyms":[{"name":"histone H3 R17 methylation","type":"exact"},{"name":"histone H3R17me","type":"exact"},{"name":"histone lysine H3 R17 methylation","type":"exact"}],"termid":"GO:0034971"}


id: MONDO:0030518
data:
  {"annotated_genes":["SJAG_01159"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87893],"is_not":false,"summary":null,"term":"MONDO:0030518"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"trichothiodystrophy","termid":"MONDO:0018053"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01159":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"trichothiodystrophy 9, nonphotosensitive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619692","MEDGEN:1794268","UMLS:C5562058"],"synonyms":[{"name":"TTD9","type":"exact"}],"termid":"MONDO:0030518","terms_by_termid":{"MONDO:0030518":null},"xrefs":{"Monarch":{"xref_id":"0030518"}}}


id: PR:P0CT42
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-7 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13D1.01c","synonyms":[{"name":"Spom972h-Tf2-7","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT42"}


id: SO:0000328
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequence used experimentally to detect the presence or absence of a complementary nucleic acid.","direct_ancestors":[{"relation_name":"is_a","term_name":"probe","termid":"SO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microarray_oligo","synonyms":[{"name":"microarray oligo","type":"exact"},{"name":"microarray oligonucleotide","type":"exact"}],"termid":"SO:0000328"}


id: _global:orthologous_to
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","direct_ancestors":[{"relation_name":"is_a","term_name":"homologous_to","termid":"_global:homologous_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologous_to","termid":"_global:orthologous_to"}


id: PBO:0030904
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cytoskeleton_organization_during_vegetative_growth","termid":"PBO:0030904"}


id: MOD:01226
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to an L-fluorotryptophan.","definition_xrefs":["PubMed:8069568","Unimod:127#W"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorinated residue","termid":"MOD:00498"},{"relation_name":"is_a","term_name":"halogenated tryptophan","termid":"MOD:01068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monofluorinated L-tryptophan","synonyms":[{"name":"Fluoro","type":"related"},{"name":"fluorophenylalanine replacement of phenylalanine","type":"related"}],"termid":"MOD:01226"}


id: PR:Q10351
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gpi17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI transamidase component PIG-S homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F12.09","synonyms":[{"name":"Spom972h-gpi17","type":"exact"}],"termid":"PR:Q10351"}


id: PBO:0062785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ORAI calcium release-activated calcium modulator 3","termid":"PBO:0062785"}


id: PBO:0084061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein (GAP) for yeast Rab family member Ypt6p; involved in vesicle mediated protein transport","termid":"PBO:0084061"}


id: MONDO:0011989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infectious disease that is transmitted through the bite of hematophagous female phlebotomine sand flies. The clinical spectrum ranges from asymptomatic to clinically overt disease which can remain localized to the skin or disseminate to the upper oral and respiratory mucous membranes or throughout the reticulo-endothelial system. Three main clinical syndromes have been described: visceral (or Kala-Azar; with fever, weight loss, hepatosplenomegaly), cutaneous, and mucocutaneous leishmaniasis (cutaneous or mucocutaneous ulceration).","definition_xrefs":["Orphanet:507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protozoa infectious disease","termid":"MONDO:0002428"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leishmaniasis","secondary_identifiers":["NCIT:C34767","SCTID:80612004","ICD9:085.9","MedDRA:10024198","NORD:1895","UMLS:C0023281","EFO:0005044","DOID:9065","ICD10CM:B55","icd11.foundation:1082373067","MEDGEN:9714","MESH:D007896","GARD:6881","ICD9:085"],"synonyms":[{"name":"cutaneous leishmaniasis (subtype)","type":"related"},{"name":"post kala-Azar dermal leishmaniasis","type":"related"},{"name":"post-kala-azar dermal infectious disease by leishmaniasis","type":"related"},{"name":"post-kala-azar dermal leishmaniasis","type":"related"},{"name":"visceral leishmaniasis (subtype)","type":"related"}],"termid":"MONDO:0011989","xrefs":{"Monarch":{"xref_id":"0011989"}}}


id: PBO:0046676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extended synaptotagmin 2","termid":"PBO:0046676"}


id: MONDO:0800308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"orotic aciduria","termid":"MONDO:0009797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0019254"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005066","MONDO:0002280","MONDO:0019254"],"is_obsolete":false,"name":"orotic aciduria without megaloblastic anemia","secondary_identifiers":["UMLS:C3278622","MEDGEN:480252"],"synonyms":[{"name":"OAWA","type":"exact"}],"termid":"MONDO:0800308","xrefs":{"Monarch":{"xref_id":"0800308"}}}


id: PBO:0052028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JPT1 pseudogene 1","termid":"PBO:0052028"}


id: MONDO:0005929
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of clinical depression that occurs after childbirth.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"endogenous depression","termid":"MONDO:0012048"},{"relation_name":"is_a","term_name":"depressive disorder","termid":"MONDO:0002050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"postpartum depression","secondary_identifiers":["UMLS:C0221074","MEDGEN:66359","SCTID:279225001","NCIT:C92852","DOID:9478","EFO:0007453","ICD10CM:F53","ICD10CM:F53.0","MESH:D019052"],"synonyms":[{"name":"depression, post-Natal","type":"related"},{"name":"depression, post-partum","type":"related"},{"name":"depression, postnatal","type":"related"},{"name":"depressive episode with postpartum onset","type":"exact"},{"name":"major depressive episode with peripartum onset","type":"exact"},{"name":"maternity blues","type":"exact"},{"name":"post Natal depression","type":"related"},{"name":"post partum depression","type":"related"},{"name":"post-Natal depression","type":"related"},{"name":"post-partum depression","type":"related"},{"name":"postnatal depression","type":"exact"},{"name":"postpartum depression","type":"exact"}],"termid":"MONDO:0005929","xrefs":{"Monarch":{"xref_id":"0005929"}}}


id: PBO:0082972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic RNA-binding protein; contains an RNA recognition motif (RRM); may have a role in mRNA translation, as suggested by genetic interactions with genes encoding proteins involved in translational initiation","termid":"PBO:0082972"}


id: PBO:0049826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDGF like 1","termid":"PBO:0049826"}


id: PR:O14344
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An inosine-5'-monophosphate dehydrogenase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine-5'-monophosphate dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2F12.14c","secondary_identifiers":["UniProtKB:O14344"],"synonyms":[{"name":"IMP dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IMPD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IMPDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC2F12.14c","type":"related"},{"name":"Spom972h-guaB","type":"exact"}],"termid":"PR:O14344"}


id: PR:Q10490
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A leucine--tRNA ligase, cytoplasmic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine--tRNA ligase, cytoplasmic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.13c","secondary_identifiers":["UniProtKB:Q10490"],"synonyms":[{"name":"LeuRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-LARS","type":"exact"},{"name":"leucyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10490"}


id: GO:1902613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of anti-Mullerian hormone signaling pathway.","definition_xrefs":["GO_REF:0000058","GOC:hjd","GOC:TermGenie","PMID:23624077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","termid":"GO:0090101"},{"relation_name":"is_a","term_name":"regulation of anti-Mullerian hormone signaling pathway","termid":"GO:1902612"},{"relation_name":"negatively_regulates","term_name":"anti-Mullerian hormone receptor signaling pathway","termid":"GO:1990262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of anti-Mullerian hormone signaling pathway","synonyms":[{"name":"down regulation of anti-Mullerian hormone signaling pathway","type":"exact"},{"name":"down-regulation of anti-Mullerian hormone signaling pathway","type":"exact"},{"name":"downregulation of anti-Mullerian hormone signaling pathway","type":"exact"},{"name":"inhibition of anti-Mullerian hormone signaling pathway","type":"narrow"}],"termid":"GO:1902613"}


id: GO:0110117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of compound eye photoreceptor cell differentiation.","definition_xrefs":["PMID:16377567","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of photoreceptor cell differentiation","termid":"GO:0046534"},{"relation_name":"is_a","term_name":"regulation of compound eye photoreceptor cell differentiation","termid":"GO:0110116"},{"relation_name":"positively_regulates","term_name":"compound eye photoreceptor cell differentiation","termid":"GO:0001751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of compound eye photoreceptor cell differentiation","termid":"GO:0110117"}


id: GO:0140799
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glycine(out) + H+(in) = glycine(in) + H+(out).","definition_xrefs":["PMID:16701208","PMID:26912364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"glycine transmembrane transporter activity","termid":"GO:0015187"},{"relation_name":"is_a","term_name":"amino acid:monoatomic cation antiporter activity","termid":"GO:0140848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"glycine:proton antiporter activity","termid":"GO:0140799"}


id: MONDO:1040024
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A demyelinating disease of the central nervous system characterized by the presence of a demyelinating event (optic neuritis, myelitis, acute/multiphasic encephalomyelitis, cerebral or polyfocal deficits, brainstem or cerebellar deficits, and/or cerebral cortical encephalitis), a positive myelin oligodendrocyte glycorotein-IgG test, and exclusion of an alternative diagnosis like MS.","definition_xrefs":["PMID:37789888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"demyelinating disease of central nervous system","termid":"MONDO:0020800"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"myelin oligodendrocyte glycoprotein antibody-associated disease","secondary_identifiers":["MEDGEN:1813985","UMLS:C5554054"],"termid":"MONDO:1040024","xrefs":{"Monarch":{"xref_id":"1040024"}}}


id: MOD:01406
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-threonine residue to form L-threonine thiazole-4-carboxylic acid.","definition_xrefs":["PubMed:11320328","RESID:AA0483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-threonine thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S,2R)-1-amino-2-hydroxypropyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1-azanyl-2-hydroxypropyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazole-4-carboxylic acid (Thr-Cys)","type":"exact"},{"name":"L-threonine thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01406"}


id: GO:0051058
data:
  {"annotated_genes":["SJAG_03681","SJAG_04943","SJAG_02379","SJAG_01386","SJAG_03508","SJAG_02514","SJAG_03353","SJAG_01464","SJAG_01790","SJAG_06270","SJAG_00883","SJAG_00229","SJAG_02169","SJAG_04455","SJAG_03592","SJAG_00526","SJAG_04462"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046580"},{"annotations":[73283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035024"},{"annotations":[101405,94741,103090,117763,106871,97453,93549,112015,108932,92538,74647,95269,109375,109065,94656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of small GTPase mediated signal transduction.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small GTPase mediated signal transduction","termid":"GO:0051056"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"small GTPase-mediated signal transduction","termid":"GO:0007264"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00526":null,"SJAG_00883":null,"SJAG_01386":null,"SJAG_01464":null,"SJAG_01790":null,"SJAG_02169":null,"SJAG_02379":null,"SJAG_02514":null,"SJAG_03353":null,"SJAG_03508":null,"SJAG_03592":null,"SJAG_03681":null,"SJAG_04455":null,"SJAG_04462":null,"SJAG_04943":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of small GTPase mediated signal transduction","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of small GTPase mediated signal transduction","type":"exact"},{"name":"down-regulation of small GTPase mediated signal transduction","type":"exact"},{"name":"downregulation of small GTPase mediated signal transduction","type":"exact"},{"name":"inhibition of small GTPase mediated signal transduction","type":"narrow"},{"name":"negative regulation of small GTPase-mediated signal transduction","type":"exact"}],"termid":"GO:0051058","terms_by_termid":{"GO:0031030":null,"GO:0035024":null,"GO:0046580":null}}


id: PBO:0062694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily B member 5","termid":"PBO:0062694"}


id: FYPO:0004742
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at the outer repeat region of the centromere is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin silencing at centromere","termid":"FYPO:0002360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal chromatin silencing at centromere outer repeat","synonyms":[{"name":"normal centromere outer repeat region chromatin silencing","type":"exact"},{"name":"normal chromatin silencing at centromere otr","type":"exact"},{"name":"normal chromatin silencing at centromere outer repeat region","type":"exact"},{"name":"normal chromatin silencing at centromere outer repeat region during mitotic cell cycle","type":"related"},{"name":"normal chromatin silencing at centromere outer repeat region during vegetative growth","type":"exact"},{"name":"normal chromatin silencing at centromeric outer repeat region","type":"exact"},{"name":"normal chromatin silencing at pericentric region","type":"related"},{"name":"normal chromatin silencing at pericentromeric region","type":"related"},{"name":"normal heterochromatic silencing at centromere outer repeat region","type":"exact"},{"name":"normal heterochromatin silencing at centromere outer repeat region","type":"exact"}],"termid":"FYPO:0004742"}


id: FYPO:0005901
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actin filament-based movement is increased. Actin filament-based movement is the movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins.","definition_xrefs":["PomBase:mah","GO:0030048","PMID:19570908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin filament-based movement","termid":"FYPO:0005900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased rate of actin filament-based movement","synonyms":[{"name":"increased rate of actin filament-based movement during mitotic cell cycle","type":"related"},{"name":"increased rate of actin filament-based movement during vegetative growth","type":"exact"}],"termid":"FYPO:0005901"}


id: MONDO:0859376
data:
  {"annotated_genes":["SJAG_02447","SJAG_02589"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89105,89106],"is_not":false,"summary":null,"term":"MONDO:0859376"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"congenital hydrocephalus","termid":"MONDO:0016349"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02447":null,"SJAG_02589":null},"genotype_count":0,"is_obsolete":false,"name":"hydrocephalus, congenital, 5, susceptibility to","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620241","UMLS:C5830272","MEDGEN:1840908"],"termid":"MONDO:0859376","terms_by_termid":{"MONDO:0859376":null},"xrefs":{"Monarch":{"xref_id":"0859376"}}}


id: GO:0032326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the Mo-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear molybdenum (Mo) ion coordinated by one or two molybdopterin ligands.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mo-molybdopterin cofactor metabolic process","termid":"GO:0019720"},{"relation_name":"is_a","term_name":"molybdopterin cofactor catabolic process","termid":"GO:0032325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Mo-molybdopterin cofactor catabolic process","synonyms":[{"name":"Mo-molybdopterin cofactor breakdown","type":"exact"},{"name":"Mo-molybdopterin cofactor catabolism","type":"exact"},{"name":"Mo-molybdopterin cofactor degradation","type":"exact"},{"name":"Moco catabolic process","type":"broad"},{"name":"Moco catabolism","type":"broad"}],"termid":"GO:0032326"}


id: PBO:0073456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfactant associated 2","termid":"PBO:0073456"}


id: GO:0039581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host PKR (protein kinase regulated by RNA) activity by binding to double-stranded RNA (dsRNA). Binding of viral proteins to RNA may sequester or alter the RNA so it can not be recognized by host PKR, or may compete with PKR for dsRNA binding.","definition_xrefs":["PMID:7514679"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host PKR activity via double-stranded RNA binding (obsolete GO:0039581)","synonyms":[{"name":"suppression by virus of host PKR activity by binding to dsRNA","type":"exact"}],"termid":"GO:0039581"}


id: PBO:0078407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon CCC) 2-1","termid":"PBO:0078407"}


id: PBO:0052371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 18B","termid":"PBO:0052371"}


id: GO:0075056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of symbiont penetration peg formation for entry into host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of penetration peg formation (obsolete GO:0075056)","synonyms":[{"name":"negative regulation of symbiont penetration peg formation for entry into host","type":"narrow"},{"name":"negative regulation of symbiont penetration peg initiation","type":"narrow"}],"termid":"GO:0075056"}


id: GO:0044342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of pancreatic B cells, resulting in the expansion of an pancreatic B cell population. Pancreatic B cell are cells of the pancreas that secrete insulin.","definition_xrefs":["GOC:jl","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type B pancreatic cell proliferation","synonyms":[{"name":"pancreatic B cell proliferation","type":"exact"},{"name":"pancreatic beta cell proliferation","type":"exact"}],"termid":"GO:0044342"}


id: GO:1900797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cordyol C.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"},{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"cordyol C metabolic process","synonyms":[{"name":"cordyol C metabolism","type":"exact"}],"termid":"GO:1900797"}


id: PBO:0050631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor family, X-linked 1","termid":"PBO:0050631"}


id: PBO:0044090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 45 member A10","termid":"PBO:0044090"}


id: MONDO:0800206
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa dystrophica","termid":"MONDO:0006543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa dystrophica with subcorneal cleavage","secondary_identifiers":["UMLS:C2675683","MEDGEN:436495"],"synonyms":[{"name":"EBDSC","type":"exact"}],"termid":"MONDO:0800206","xrefs":{"Monarch":{"xref_id":"0800206"}}}


id: PBO:0039636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amine oxidase copper containing 4, pseudogene","termid":"PBO:0039636"}


id: PBO:0046787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer of zeste 2 polycomb repressive complex 2 subunit","termid":"PBO:0046787"}


id: MONDO:1012971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disturbances in growth processes leading to reduced height in non-human animals.","definition_xrefs":["PMID:28697878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dwarfism, non-human animal","termid":"MONDO:1012971","xrefs":{"Monarch":{"xref_id":"1012971"}}}


id: PBO:0113368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates the vacuolar V-ATPase; inhibits V1-ATPase activity and triggers ATP-dependent disassembly of the V-ATPase holoenzyme, counteracting the function of the RAVE complex; localizes to the cytoplasm; required for retention of the vacuolar-ATPase V0 domain subunit Stv1p in pre-vacuolar compartments; involved in resistance to oxidative damage; member of a conserved family of TLDc domain proteins found in eukaryotes; contains an N-terminal EF-hand-like domain","termid":"PBO:0113368"}


id: PBO:0108982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 6","termid":"PBO:0108982"}


id: MONDO:0971107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"persistent truncus arteriosus","termid":"MONDO:0018072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"common arterial trunk with aortic dominance","secondary_identifiers":["Orphanet:665044","UMLS:C4546067","MEDGEN:1622872"],"termid":"MONDO:0971107","xrefs":{"Monarch":{"xref_id":"0971107"}}}


id: PBO:0061508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NRXN2 antisense RNA 1","termid":"PBO:0061508"}


id: FYPO:0008391
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of histone H4 measured in the cell is higher than normal.","definition_xrefs":["PMID:39878217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"increased level of histone H4 in cell","termid":"FYPO:0008391"}


id: PBO:0048034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III and SPRY domain containing 1 like","termid":"PBO:0048034"}


id: PBO:0116598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFNG regulatory antisense RNA 1","termid":"PBO:0116598"}


id: PR:O60099
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trs65 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C14F5.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14F5.02","synonyms":[{"name":"Spom972h-trs65","type":"exact"}],"termid":"PR:O60099"}


id: GO:0103111
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(pros)-phospho-L-histidyl-[protein] + N-acetyl-D-glucosamine(out) = L-histidyl-[protein] + N-acetyl-D-glucosamine 6-phosphate(in).","definition_xrefs":["RHEA:49240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"protein-N(pi)-phosphohistidine--N-acetyl-D-glucosamine phosphotransferase activity","secondary_identifiers":["EC:2.7.1.193"],"synonyms":[{"name":"D-glucosamine PTS permease activity","type":"exact"},{"name":"N-acetyl-D-glucosamine PTS permease activity","type":"exact"}],"termid":"GO:0103111"}


id: GO:1901048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by an extracellular ligand binding to a transforming growth factor beta receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription, that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size.","definition_xrefs":["GOC:kmv","GOC:TermGenie","PMID:9847239"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor signaling pathway involved in regulation of multicellular organism growth (obsolete GO:1901048)","synonyms":[{"name":"TGF-beta receptor signaling pathway of regulation of body growth","type":"exact"},{"name":"TGF-beta receptor signaling pathway of regulation of body size","type":"exact"},{"name":"TGF-beta receptor signaling pathway of regulation of multicellular organism growth","type":"exact"},{"name":"TGF-beta receptor signalling pathway of regulation of body growth","type":"exact"},{"name":"TGF-beta receptor signalling pathway of regulation of body size","type":"exact"},{"name":"TGF-beta receptor signalling pathway of regulation of multicellular organism growth","type":"exact"},{"name":"TGFbeta receptor signaling pathway of regulation of body growth","type":"exact"},{"name":"TGFbeta receptor signaling pathway of regulation of body size","type":"exact"},{"name":"TGFbeta receptor signaling pathway of regulation of multicellular organism growth","type":"exact"},{"name":"TGFbeta receptor signalling pathway of regulation of body growth","type":"exact"},{"name":"TGFbeta receptor signalling pathway of regulation of body size","type":"exact"},{"name":"TGFbeta receptor signalling pathway of regulation of multicellular organism growth","type":"exact"},{"name":"transforming growth factor beta receptor signaling pathway of regulation of body growth","type":"exact"},{"name":"transforming growth factor beta receptor signaling pathway of regulation of body size","type":"exact"},{"name":"transforming growth factor beta receptor signaling pathway of regulation of multicellular organism growth","type":"exact"},{"name":"transforming growth factor beta receptor signalling pathway of regulation of body growth","type":"exact"},{"name":"transforming growth factor beta receptor signalling pathway of regulation of body size","type":"exact"},{"name":"transforming growth factor beta receptor signalling pathway of regulation of multicellular organism growth","type":"exact"}],"termid":"GO:1901048"}


id: MONDO:0024487
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious process affecting the nail.","definition_xrefs":["NCIT:C78493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nail disorder","termid":"MONDO:0002884"},{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nail infection","secondary_identifiers":["UMLS:C0343026","MEDGEN:87467"],"synonyms":[{"name":"nail infection","type":"exact"}],"termid":"MONDO:0024487","xrefs":{"Monarch":{"xref_id":"0024487"}}}


id: GO:0034364
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A lipoprotein particle with a high density (typically 1.063-1.21 g/ml) and a diameter of 5-10 nm that contains APOAs and may contain APOCs and APOE; found in blood and carries lipids from body tissues to the liver as part of the reverse cholesterol transport process.","definition_xrefs":["GOC:pde","GOC:BHF","GOC:expert_pt","GOC:rl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle","termid":"GO:0034358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005576","GO:0032991"],"is_obsolete":false,"name":"high-density lipoprotein particle","synonyms":[{"name":"HDL complex","type":"exact"},{"name":"HDL particle","type":"exact"},{"name":"HDL2","type":"related"},{"name":"HDL3","type":"related"},{"name":"high-density lipoprotein class complex","type":"exact"}],"termid":"GO:0034364"}


id: PBO:0086891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transmembrane protein involved in export of ammonia; ammonia is a starvation signal that promotes cell death in aging colonies; phosphorylated in mitochondria; member of the TC 9.B.33 YaaH family; homolog of Y. lipolytica Gpr1p; ATO2 has a paralog, ADY2, that arose from the whole genome duplication","termid":"PBO:0086891"}


id: PBO:0086763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; S288C contains an in-frame stop codon between ORFs YLR030W and YLR031W; YLR031W has a paralog, YMR124W, that arose from the whole genome duplication","termid":"PBO:0086763"}


id: GO:0061506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of a DNA topological transformation by transiently cleaving a pair of complementary DNA strands to form a gate through which a second double-stranded DNA segment is passed, after which the severed strands in the first DNA segment are rejoined; product release is not coupled to ATP binding and hydrolysis; changes the linking number in multiples of 2.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA topoisomerase type II (ATP-independent) activity (obsolete GO:0061506)","termid":"GO:0061506"}


id: MONDO:0017179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Limbic encephalitis with caspr2 antibodies is a rare neuroimmunological disorder characterized by the onset of cognitive deficits, psychiatric disturbances (e.g. personality changes), seizures, peripheral nerve hyperexcitability, dysautonomia, neuropathic pain, insomnia and weight loss, in association with detection of caspr2 antibodies in serum or cerebrospinal fluid, with or without underlying malignancies. Other features reported include blepharoclonus, myoclonic status epilepticus, and dyskinesia.","definition_xrefs":["Orphanet:276402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"limbic encephalitis","termid":"MONDO:0015588"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"limbic encephalitis with caspr2 antibodies","secondary_identifiers":["MEDGEN:1634906","SCTID:763793004","UMLS:C4706582"],"termid":"MONDO:0017179","xrefs":{"Monarch":{"xref_id":"0017179"}}}


id: PBO:0063361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proprotein convertase subtilisin/kexin type 1","termid":"PBO:0063361"}


id: GO:0090160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances from the Golgi to lysosomes.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi to vacuole transport","termid":"GO:0006896"},{"relation_name":"is_a","term_name":"lysosomal transport","termid":"GO:0007041"},{"relation_name":"is_a","term_name":"cytosolic transport","termid":"GO:0016482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"Golgi to lysosome transport","termid":"GO:0090160"}


id: PBO:0040037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo like helical domain containing 4","termid":"PBO:0040037"}


id: GO:0098684
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribbon synapse between a retinal photoreceptor cell (rod or cone) and a retinal bipolar cell. These contain a plate-like synaptic ribbon.","definition_xrefs":["PMID:15626493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribbon synapse","termid":"GO:0097470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"photoreceptor ribbon synapse","termid":"GO:0098684"}


id: MONDO:0032647
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete global developmental delay, lung cysts, overgrowth, and wilms tumor (obsolete MONDO:0032647)","termid":"MONDO:0032647","xrefs":{"Monarch":{"xref_id":"0032647"}}}


id: MONDO:0024543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any brittle cornea syndrome in which the cause of the disease is a mutation in the ZNF469 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brittle cornea syndrome","termid":"MONDO:0009242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005328"],"is_obsolete":false,"name":"brittle cornea syndrome 1","secondary_identifiers":["MESH:C536192","UMLS:C0268344","MEDGEN:78661","OMIM:229200","SCTID:31798004"],"synonyms":[{"name":"BCS1","type":"related"},{"name":"Ehlers-Danlos syndrome, type Vib","type":"related"},{"name":"Ehlers-Danlos syndrome, type Vib, formerly","type":"related"},{"name":"Fragilitas oculi with Joint hyperextensibility","type":"related"},{"name":"ZNF469 brittle cornea syndrome","type":"exact"},{"name":"brittle cornea syndrome 1","type":"exact"},{"name":"brittle cornea syndrome caused by mutation in ZNF469","type":"exact"},{"name":"corneal fragility, keratoglobus, blue sclerae, Joint hyperextensibility","type":"related"},{"name":"dysgenesis Mesodermalis corneae Et sclerae","type":"related"}],"termid":"MONDO:0024543","xrefs":{"Monarch":{"xref_id":"0024543"}}}


id: GO:0097202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the activity of the inactive enzyme cysteine-type endopeptidase.","definition_xrefs":["GOC:mtg_apoptosis","PMID:21726810"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of cysteine-type endopeptidase activity (obsolete GO:0097202)","synonyms":[{"name":"activation of caspase activity","type":"narrow"},{"name":"activation of metacaspase activity","type":"related"}],"termid":"GO:0097202"}


id: PBO:0052548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell lectin like receptor C1","termid":"PBO:0052548"}


id: MONDO:0002389
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adenofibroma (obsolete MONDO:0002389)","termid":"MONDO:0002389","xrefs":{"Monarch":{"xref_id":"0002389"}}}


id: PBO:0091115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine aspartase, involved in protein processing","termid":"PBO:0091115"}


id: PBO:0049517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2AC histone family pseudogene 2","termid":"PBO:0049517"}


id: PBO:0081403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 251","termid":"PBO:0081403"}


id: GO:0075521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a virus, or part of a virus, towards the host cell nucleus using host microtubules.","definition_xrefs":["VZ:983","UniProtKB-KW:KW-1177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-dependent intracellular transport of viral material","termid":"GO:0075519"},{"relation_name":"is_a","term_name":"transport of viral material towards nucleus","termid":"GO:0075606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microtubule-dependent intracellular transport of viral material towards nucleus","synonyms":[{"name":"microtubule-dependent intracellular transport of viral material to nucleus","type":"exact"}],"termid":"GO:0075521"}


id: PBO:0089371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial copper chaperone for cytochrome c oxidase Cox19","termid":"PBO:0089371"}


id: MONDO:0800123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An interstitial lung disease characterized histologically by fibrosis and/or inflammation confined to the alveolar interstitium around bronchovascular bundles, overlapping with peribronchial metaplasia, fibrosis in some series and the lack of interstitial granulomas.","definition_xrefs":["PMID:26627191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pneumonia","termid":"MONDO:0005249"},{"relation_name":"is_a","term_name":"interstitial lung disease","termid":"MONDO:0015925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bronchiolocentric pattern of interstitial pneumonia","synonyms":[{"name":"BPIP","type":"exact"}],"termid":"MONDO:0800123","xrefs":{"Monarch":{"xref_id":"0800123"}}}


id: MONDO:0044625
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"autosomal dominant charcot-marie-tooth disease type 2 due to DGAT2 mutation","secondary_identifiers":["Orphanet:487814","GARD:21999","MEDGEN:1798938","UMLS:C5567515"],"synonyms":[{"name":"CMT2 due to DGAT2 mutation","type":"exact"}],"termid":"MONDO:0044625","xrefs":{"Monarch":{"xref_id":"0044625"}}}


id: PBO:0041818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capping protein regulator and myosin 1 linker 3","termid":"PBO:0041818"}


id: PBO:0079430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin epsilon 1","termid":"PBO:0079430"}


id: PBO:0070505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 4","termid":"PBO:0070505"}


id: MONDO:0957896
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A steatotic liver disease characterized by at least one of the five cardiometabolic risk factors for MASLD and alcohol consumption of 140-350g/week (females) or 210-420g/week (males). This disease is distinguished from MASLD by increased alcohol consumption and from ALD by the evidence of one or more of the MASLD cardiometabolic risk factors.","definition_xrefs":["DOID:0070508","PMID:34722187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty liver disease","termid":"MONDO:0004790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"metabolic dysfunction and alcohol associated liver disease","termid":"MONDO:0957896","xrefs":{"Monarch":{"xref_id":"0957896"}}}


id: PBO:0029414
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_with_branched,_elongated_germ_tube","termid":"PBO:0029414"}


id: MONDO:1012086
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tetragametic chimerism, non-human animal","termid":"MONDO:1011918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetragametic chimerism, sheep","secondary_identifiers":["OMIA:000393-9940"],"termid":"MONDO:1012086","xrefs":{"Monarch":{"xref_id":"1012086"}}}


id: GO:0080031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + methyl salicylate = H+ + methanol + salicylate.","definition_xrefs":["PMID:18643994","PMID:18467465","RHEA:33611"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"methyl salicylate esterase activity","secondary_identifiers":["MetaCyc:RXNQT-4366"],"synonyms":[{"name":"MESA esterase activity","type":"exact"},{"name":"methyl SA esterase activity","type":"exact"},{"name":"methylsalicylate esterase activity","type":"exact"},{"name":"salicylic acid methyl ester esterase activity","type":"exact"}],"termid":"GO:0080031"}


id: PBO:0060146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTRES1 pseudogene 1","termid":"PBO:0060146"}


id: GO:0098536
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spherical, electron dense, cytoplasmic structure that is involved in de novo assembly of centrioles.","definition_xrefs":["PMID:24075808","GOC:cilia","PMID:5661997","GOC:dos","PMID:25047614"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"deuterosome","termid":"GO:0098536"}


id: GO:0141018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a symbiont to its host by binding to a component of the host extracellular matrix. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:15228540","PMID:21270401","PMID:23586629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont to host","termid":"GO:0044406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion of symbiont to host via host extracellular matrix","synonyms":[{"name":"adhesion of symbiont to host extracellular matrix via collagen","type":"narrow"},{"name":"adhesion of symbiont to host extracellular matrix via fibronectin","type":"narrow"},{"name":"adhesion of symbiont to host extracellular matrix via integrin","type":"narrow"},{"name":"adhesion of symbiont to host extracellular matrix via laminin","type":"narrow"},{"name":"adhesion of symbiont to host extracellular matrix via vitronectin","type":"narrow"}],"termid":"GO:0141018"}


id: GO:0071471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of non-ionic solutes (e.g. mannitol, sorbitol) in the environment.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to non-ionic osmotic stress","termid":"GO:0010335"},{"relation_name":"is_a","term_name":"cellular response to osmotic stress","termid":"GO:0071470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to non-ionic osmotic stress","termid":"GO:0071471"}


id: GO:0034951
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: o-hydroxylaminobenzoate = 3-hydroxyanthranilate.","definition_xrefs":["UM-BBD_reactionID:r1026"],"gene_count":0,"genotype_count":0,"name":"obsolete o-hydroxylaminobenzoate mutase activity (obsolete GO:0034951)","termid":"GO:0034951"}


id: GO:0048745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of smooth muscle over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid","GOC:lm","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle tissue development","termid":"GO:0060537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"smooth muscle tissue development","termid":"GO:0048745"}


id: GO:0061881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increasesthe frequency, rate or extent of the directed movement of mitochondria along microtubules in axons away from the cell body and towards the presynapse.","definition_xrefs":["PMID:24302729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"is_a","term_name":"regulation of anterograde axonal transport of mitochondrion","termid":"GO:0061880"},{"relation_name":"positively_regulates","term_name":"anterograde axonal transport of mitochondrion","termid":"GO:0098957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of anterograde axonal transport of mitochondrion","synonyms":[{"name":"positive regulation of anterograde axon transport of mitochondria","type":"exact"}],"termid":"GO:0061881"}


id: PBO:0066590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member D","termid":"PBO:0066590"}


id: GO:2000105
data:
  {"annotated_genes":["SJAG_03957","SJAG_03160","SJAG_03720","SJAG_03695","SJAG_03048","SJAG_00364","SJAG_03438"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[119142,113891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903468"},{"annotations":[90875,118092,108453,104195],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904514"},{"annotations":[97561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090297"},{"annotations":[104199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903465"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA-templated DNA replication.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA replication","termid":"GO:0045740"},{"relation_name":"is_a","term_name":"regulation of DNA-templated DNA replication","termid":"GO:0090329"},{"relation_name":"positively_regulates","term_name":"DNA-templated DNA replication","termid":"GO:0006261"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03438":null,"SJAG_03695":null,"SJAG_03720":null,"SJAG_03957":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006260"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006260","GO:0006259"],"is_obsolete":false,"name":"positive regulation of DNA-templated DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of DNA-dependent DNA replication","type":"exact"}],"termid":"GO:2000105","terms_by_termid":{"GO:0090297":null,"GO:1903465":null,"GO:1903468":null,"GO:1904514":null}}


id: GO:0018576
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: catechol + O2 = cis,cis-muconate.","definition_xrefs":["RHEA:23852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"catechol 1,2-dioxygenase activity","secondary_identifiers":["EC:1.13.11.1","UM-BBD_enzymeID:r0601","MetaCyc:CATECHOL-12-DIOXYGENASE-RXN"],"synonyms":[{"name":"1,2-pyrocatechase activity","type":"related"},{"name":"CD I","type":"related"},{"name":"CD II","type":"related"},{"name":"catechase activity","type":"related"},{"name":"catechol 1,2-oxygenase activity","type":"related"},{"name":"catechol-oxygen 1,2-oxidoreductase activity","type":"related"},{"name":"catechol:oxygen 1,2-oxidoreductase activity","type":"related"},{"name":"pyrocatechase activity","type":"related"},{"name":"pyrocatechol 1,2-dioxygenase activity","type":"related"}],"termid":"GO:0018576"}


id: MONDO:0800494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epilepsy syndrome characterized by a combined generalized and focal epilepsy syndromes where age at seizure onset varies.","direct_ancestors":[{"relation_name":"is_a","term_name":"combined generalized and focal epilepsy","termid":"MONDO:0100573"},{"relation_name":"is_a","term_name":"variable age epilepsy syndrome","termid":"MONDO:0100619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"variable-age onset combined generalized and focal epilepsy syndrome","termid":"MONDO:0800494","xrefs":{"Monarch":{"xref_id":"0800494"}}}


id: GO:0003062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of the rate of heart contraction mediated by chemical signaling, hormonal, autocrine or paracrine.","definition_xrefs":["GOC:rl","GOC:dph","GOC:mtg_cardio","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart rate","termid":"GO:0002027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of heart rate by chemical signal","synonyms":[{"name":"chemical cardiac chronotropy","type":"exact"},{"name":"chemical signal regulation of heart contraction rate","type":"related"},{"name":"chemical signal regulation of heart rate","type":"exact"}],"termid":"GO:0003062"}


id: MONDO:0010614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked congenital generalized hypertrichosis is an extremely rare type of hypertrichosis lanuginosa congenita, a congenital skin disease, which is characterized by hair overgrowth on the entire body in males, and mild and asymmetric hair overgrowth in females. It is associated with a mild facial dysmorphism (anterverted nostrils, moderate prognathism), and, in a kindred, it was also associated with dental anomalies and deafness.","definition_xrefs":["Orphanet:79495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrichosis lanuginosa congenita","termid":"MONDO:0016381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"X-linked congenital generalized hypertrichosis","secondary_identifiers":["UMLS:C5887323","OMIM:307150","MEDGEN:1856186","GARD:2863","MESH:C538388"],"synonyms":[{"name":"Cgh","type":"related"},{"name":"HTC2","type":"related"},{"name":"Macias Flores-Garcia Cruz-Rivera syndrome","type":"exact"},{"name":"Macias-Flores Garcia-Cruz Rivera syndrome","type":"related"},{"name":"chromosome Xq27.1 Interchromosomal insertion syndrome","type":"related"},{"name":"chromosome Xq27.1 interchromosomal insertion syndrome","type":"related"},{"name":"congenital generalised hypertrichosis, Macias-Flores type","type":"exact"},{"name":"congenital generalized hypertrichosis, Macias-Flores type","type":"exact"},{"name":"hCG","type":"related"},{"name":"hypertrichosis congenital generalised X-linked","type":"related"},{"name":"hypertrichosis congenital generalized X-linked","type":"related"},{"name":"hypertrichosis, congenital generalised","type":"related"},{"name":"hypertrichosis, congenital generalized","type":"related"},{"name":"hypertrichosis, congenital generalized, X-linked dominant","type":"exact"}],"termid":"MONDO:0010614","xrefs":{"Monarch":{"xref_id":"0010614"}}}


id: GO:0021730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the trigeminal sensory nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:dgh","GOC:dph","GO_REF:0000021","GOC:jid","GOC:cls","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"brain development","termid":"GO:0007420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trigeminal sensory nucleus development","termid":"GO:0021730"}


id: GO:0051340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of ligase activity, the catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of ligase activity (obsolete GO:0051340)","synonyms":[{"name":"ligase regulator","type":"exact"}],"termid":"GO:0051340"}


id: PBO:0043834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage and polyadenylation specific factor 6","termid":"PBO:0043834"}


id: MONDO:0002699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pancreatic ductal carcinoma (obsolete MONDO:0002699)","termid":"MONDO:0002699","xrefs":{"Monarch":{"xref_id":"0002699"}}}


id: PBO:0068514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 105, pseudogene","termid":"PBO:0068514"}


id: GO:0044255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving lipids, as carried out by individual cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular lipid metabolic process (obsolete GO:0044255)","synonyms":[{"name":"cellular lipid metabolism","type":"exact"}],"termid":"GO:0044255"}


id: MONDO:0012593
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brain-lung-thyroid syndrome is a rare disorder characterized by congenital hypothyroidism (CH), infant respiratory distress syndrome (IRDS) and benign hereditary chorea (BHC).","definition_xrefs":["Orphanet:209905"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"NKX2-1 related choreoathetosis and congenital hypothyroidism with or without pulmonary dysfunction","termid":"MONDO:0100520"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain-lung-thyroid syndrome","secondary_identifiers":["SCTID:719098007","MEDGEN:369694","GARD:12163","UMLS:C1970269","MESH:C567034","icd11.foundation:809856670","OMIM:610978"],"synonyms":[{"name":"BLT syndrome","type":"related"},{"name":"CAHTP","type":"related"},{"name":"brain-lung-thyroid syndrome","type":"exact"},{"name":"choreoathetosis and congenital hypothyroidism with or without pulmonary dysfunction","type":"related"},{"name":"choreoathetosis, hypothyroidism, and neonatal respiratory distress","type":"exact"},{"name":"choreoathetosis-hypothyroidism-neonatal respiratory distress","type":"related"},{"name":"choreoathetosis-hypothyroidism-neonatal respiratory distress syndrome","type":"exact"}],"termid":"MONDO:0012593","xrefs":{"Monarch":{"xref_id":"0012593"}}}


id: GO:0009784
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a signal and transmitting the signal from one side of a membrane to the other to initiate a change in cell activity by catalysis of the reaction: ATP + a protein-L-histidine = ADP + a protein-L-histidine phosphate.","definition_xrefs":["GOC:lr","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein histidine kinase activity","termid":"GO:0004673"},{"relation_name":"is_a","term_name":"transmembrane receptor protein kinase activity","termid":"GO:0019199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016301","GO:0140096","GO:0016740","GO:0004672","GO:0038023"],"is_obsolete":false,"name":"transmembrane receptor histidine kinase activity","termid":"GO:0009784"}


id: PBO:0027937
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_oxygen_consumption_during_vegetative_growth","termid":"PBO:0027937"}


id: PBO:0057380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548av","termid":"PBO:0057380"}


id: PBO:0062318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily B member 3","termid":"PBO:0062318"}


id: GO:0060989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of macromolecules to form a macromolecular complex that contains a tube of lipid surrounded by a protein coat involved in membrane shaping of vesicle membranes as organelles fuse.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid tube assembly","termid":"GO:0060988"},{"relation_name":"part_of","term_name":"organelle fusion","termid":"GO:0048284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"lipid tube assembly involved in organelle fusion","synonyms":[{"name":"lipid tubulation involved in organelle fusion","type":"exact"}],"termid":"GO:0060989"}


id: PBO:0087160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I enhancer binding protein; DNA binding protein that binds to genes transcribed by both RNA polymerase I and RNA polymerase II; required for termination of RNA polymerase I transcription; Reb1p bound to DNA acts to block RNA polymerase II readthrough transcription","termid":"PBO:0087160"}


id: PR:Q9UTS5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- zas1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTS5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein zas1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1198.04c","synonyms":[{"name":"Spom972h-zas1","type":"exact"}],"termid":"PR:Q9UTS5"}


id: PBO:0085133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein of unknown function; positive regulator of mitotic exit; involved in regulating release of Cdc14p from the nucleolus in early anaphase, may play similar role in meiosis; SPO12 has a paralog, BNS1, that arose from the whole genome duplication","termid":"PBO:0085133"}


id: GO:0004854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: xanthine + NAD+ + H2O = urate + NADH + H+.","definition_xrefs":["EC:1.17.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor","termid":"GO:0016726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"xanthine dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN0-901","Reactome:R-HSA-9727349","RHEA:16669"],"synonyms":[{"name":"NAD-xanthine dehydrogenase activity","type":"related"},{"name":"xanthine oxidoreductase activity","type":"broad"},{"name":"xanthine-NAD oxidoreductase activity","type":"related"},{"name":"xanthine/NAD(+) oxidoreductase activity","type":"related"},{"name":"xanthine/NAD+ oxidoreductase activity","type":"related"},{"name":"xanthine:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0004854"}


id: PBO:0087262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein phosphatase Z, isoform of Ppz1p; involved in regulation of potassium transport, which affects osmotic stability, cell cycle progression, and halotolerance","termid":"PBO:0087262"}


id: MONDO:0011679
data:
  {"annotated_genes":["SJAG_04270"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008726"},{"annotations":[86867],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020667"}]},"cv_name":"mondo","definition":"Autosomal recessive form of craniosynostosis.","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005497"],"is_obsolete":false,"name":"craniosynostosis syndrome, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C564700","UMLS:C1847865","OMIM:606529","MEDGEN:338335"],"synonyms":[{"name":"autosomal recessive craniosynostosis","type":"exact"},{"name":"craniosynostosis syndrome, autosomal recessive","type":"exact"},{"name":"craniosynostosis, autosomal recessive","type":"exact"}],"termid":"MONDO:0011679","terms_by_termid":{"MONDO:0008726":null,"MONDO:0020667":null},"xrefs":{"Monarch":{"xref_id":"0011679"}}}


id: PBO:0050908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced protein with tetratricopeptide repeats 1","termid":"PBO:0050908"}


id: PBO:0073885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC12A2 divergent transcript","termid":"PBO:0073885"}


id: PBO:0063892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class Q","termid":"PBO:0063892"}


id: PBO:0031359
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_aureobasidin_A","termid":"PBO:0031359"}


id: PBO:0042245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine receptor 7","termid":"PBO:0042245"}


id: MONDO:0004683
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Evans' syndrome (obsolete MONDO:0004683)","termid":"MONDO:0004683","xrefs":{"Monarch":{"xref_id":"0004683"}}}


id: MONDO:0009500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"kuru","termid":"MONDO:0006825"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kuru, susceptibility to","secondary_identifiers":["MEDGEN:343389","UMLS:C1855588","OMIM:245300"],"synonyms":[{"name":"kuru, susceptibility to","type":"exact"},{"name":"susceptibility to kuru","type":"related"}],"termid":"MONDO:0009500","xrefs":{"Monarch":{"xref_id":"0009500"}}}


id: FYPO:0000811
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which peroxisome organization is abnormal. Peroxisome organization results in the assembly, arrangement of constituent parts, or disassembly of a peroxisome.","definition_xrefs":["GO:0007031","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal peroxisome organization","synonyms":[{"name":"abnormal peroxisome organisation","type":"exact"},{"name":"abnormal peroxisome organization during mitotic cell cycle","type":"related"},{"name":"abnormal peroxisome organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000811"}


id: GO:0042058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epidermal growth factor receptor signaling pathway activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ERBB signaling pathway","termid":"GO:1901184"},{"relation_name":"regulates","term_name":"epidermal growth factor receptor signaling pathway","termid":"GO:0007173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of epidermal growth factor receptor signaling pathway","synonyms":[{"name":"regulation of EGF receptor signaling pathway","type":"exact"},{"name":"regulation of EGF receptor signalling pathway","type":"exact"},{"name":"regulation of EGFR signaling pathway","type":"exact"}],"termid":"GO:0042058"}


id: GO:0051300
data:
  {"annotated_genes":["SJAG_00794","SJAG_04901","SJAG_04781","SJAG_04003","SJAG_04558","SJAG_04745","SJAG_02529","SJAG_00719","SJAG_03200","SJAG_02795","SJAG_01760","SJAG_00773","SJAG_01805","SJAG_03544","SJAG_03915"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91462,97189],"is_not":false,"summary":null,"term":"GO:0051300"},{"annotations":[97126],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140456"},{"annotations":[77558,79559,97127],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000073"},{"annotations":[95611,116983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990395"},{"annotations":[114699,116984,109264,114496,91942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903087"},{"annotations":[100086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905047"},{"annotations":[115789,98684,93109],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902441"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the spindle pole body (SPB). The SPB is the microtubule organizing center in fungi, and is functionally homologous to the animal cell centrosome.","definition_xrefs":["GOC:mah","GOC:ai","GOC:dph","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"microtubule organizing center organization","termid":"GO:0031023"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00719":null,"SJAG_00773":null,"SJAG_00794":null,"SJAG_01760":null,"SJAG_01805":null,"SJAG_02529":null,"SJAG_02795":null,"SJAG_03200":null,"SJAG_03544":null,"SJAG_03915":null,"SJAG_04003":null,"SJAG_04558":null,"SJAG_04745":null,"SJAG_04781":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0007049","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"spindle pole body organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0051426"],"synonyms":[{"name":"SPB maturation","type":"related"},{"name":"SPB organization","type":"exact"},{"name":"spindle pole body maturation","type":"related"},{"name":"spindle pole body organisation","type":"exact"},{"name":"spindle pole body organization and biogenesis","type":"related"}],"termid":"GO:0051300","terms_by_termid":{"GO:0000073":null,"GO:0051300":null,"GO:0140456":null,"GO:1902441":null,"GO:1903087":null,"GO:1905047":null,"GO:1990395":null}}


