# terms

id: GO:0016551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The insertion into or deletion from an RNA molecule of nucleotide residues not encoded in DNA; takes place after transcription.","definition_xrefs":["PMID:11092837"],"gene_count":0,"genotype_count":0,"name":"obsolete posttranscriptional insertion or deletion editing (obsolete GO:0016551)","synonyms":[{"name":"posttranscriptional insertion or deletion editing","type":"exact"},{"name":"posttranscriptional insertion/deletion editing","type":"exact"}],"termid":"GO:0016551"}


id: PBO:0005236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNB-like protein","termid":"PBO:0005236"}


id: MONDO:0006324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A biologic subset of breast carcinoma defined by high expression of many genes expressed by adipose and other non-epithelial tissues.","definition_xrefs":["NCIT:C53557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast carcinoma by gene expression profile","termid":"MONDO:0006116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"normal breast-like subtype of breast carcinoma","secondary_identifiers":["MEDGEN:771111","EFO:1000402","UMLS:C3642471"],"synonyms":[{"name":"normal breast-like subtype of breast cancer","type":"exact"},{"name":"normal breast-like subtype of breast carcinoma","type":"exact"}],"termid":"MONDO:0006324","xrefs":{"Monarch":{"xref_id":"0006324"}}}


id: MONDO:0003346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vasculitis affecting the blood vessels of the brain and/or spinal cord.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system disorder","termid":"MONDO:0002602"},{"relation_name":"is_a","term_name":"vasculitis","termid":"MONDO:0018882"},{"relation_name":"is_a","term_name":"neurovascular disorder","termid":"MONDO:0043218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central nervous system vasculitis","secondary_identifiers":["MEDGEN:148408","DOID:525","MESH:D020293","UMLS:C0751878","NCIT:C84622"],"synonyms":[{"name":"central nervous system vasculitis","type":"exact"},{"name":"vasculitis of central nervous system","type":"exact"}],"termid":"MONDO:0003346","xrefs":{"Monarch":{"xref_id":"0003346"}}}


id: PATO:0002350
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the stalk of an organism relative to another entity.","definition_xrefs":["merriam-webster:http://www.merriam-webster.com/dictionary/cauline"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cauline to","termid":"PATO:0002350"}


id: PBO:0068394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF213 antisense RNA 1","termid":"PBO:0068394"}


id: MOD:00403
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue to homoserine.","definition_xrefs":["OMSSA:56","DeltaMass:113","Unimod:10#M"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoserine","synonyms":[{"name":"Homoserine","type":"related"},{"name":"Homoserine formed from Met by CNBr treatment","type":"exact"},{"name":"Met->Hse","type":"related"},{"name":"ctermpephsem","type":"exact"}],"termid":"MOD:00403"}


id: MONDO:0015505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tracheal anomaly (obsolete MONDO:0015505)","secondary_identifiers":["Orphanet:156252","icd11.foundation:679333287"],"termid":"MONDO:0015505","xrefs":{"Monarch":{"xref_id":"0015505"}}}


id: PBO:0072492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 21","termid":"PBO:0072492"}


id: GO:0052856
data:
  {"annotated_genes":["SJAG_02462"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75270],"is_not":false,"summary":null,"term":"GO:0052856"}]},"cv_name":"molecular_function","definition":"Catalysis of the reactions: (6R)-NADHX = (6S)-NADHX and (6R)-NADPHX = (6S)-NADPHX.","definition_xrefs":["PMID:21994945","EC:5.1.99.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity","termid":"GO:0016854"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02462":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"NAD(P)HX epimerase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-6806966"],"synonyms":[{"name":"NADHX epimerase activity","type":"narrow"},{"name":"NADPHX epimerase activity","type":"narrow"}],"termid":"GO:0052856","terms_by_termid":{"GO:0052856":null}}


id: GO:0061451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the retrotrapezoid nucleus (RTN) over time from it's initial formation to its mature state. The retrotrapezoid nucleus is a group of neurons in the rostral medulla, which are responsible regulating respiration.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"medulla oblongata development","termid":"GO:0021550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retrotrapezoid nucleus development","termid":"GO:0061451"}


id: GO:0007342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding and fusion of a sperm, with the plasma membrane of the oocyte as part of the process of single fertilization. In sperm with flagella, binding occurs at the posterior (post-acrosomal) region of the sperm head.","definition_xrefs":["PMID:17644969","GOC:dph","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"plasma membrane fusion","termid":"GO:0045026"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"fusion of sperm to egg plasma membrane involved in single fertilization","synonyms":[{"name":"sperm-oocyte fusion","type":"narrow"}],"termid":"GO:0007342"}


id: MONDO:0957317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hematuria, benign familial","secondary_identifiers":["OMIMPS:141200","Orphanet:97562","UMLS:C0241908","DOID:0111365","MEDGEN:66039","MESH:C562476"],"termid":"MONDO:0957317","xrefs":{"Monarch":{"xref_id":"0957317"}}}


id: PR:O74455
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 6-phosphogluconolactonase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11054:SF0","OMA:SCHPO04412","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphogluconolactonase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.10","secondary_identifiers":["UniProtKB:O74455"],"synonyms":[{"name":"6PGL (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PGLS","type":"exact"}],"termid":"PR:O74455"}


id: FYPO:0007373
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the methylation of histones in silent mating-type cassettes is abnormal. All histone methylation may be affected, or methylation of specific sites on specific histones may be altered.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methylation during vegetative growth","termid":"FYPO:0000457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0000002","FYPO:0001320","FYPO:0002494","FYPO:0005447"],"is_obsolete":false,"name":"abnormal histone methylation at silent mating-type cassette during vegetative growth","synonyms":[{"name":"abnormal histone methylation at mating-type region heterochromatin during vegetative growth","type":"exact"},{"name":"abnormal histone methylation at silent mating-type cassette during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007373"}


id: PBO:0072579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRN3 pseudogene 2","termid":"PBO:0072579"}


id: GO:0097413
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cytoplasmic, spherical inclusion commonly found in damaged neurons, and composed of abnormally phosphorylated, neurofilament proteins aggregated with ubiquitin and alpha-synuclein.","definition_xrefs":["NIF_Subcellular:sao4933778419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body","termid":"GO:0016234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Lewy body","synonyms":[{"name":"cytoplasmic inclusion","type":"related"}],"termid":"GO:0097413"}


id: PR:Q92377
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mdm12 gene.","definition_xrefs":["UniProtKB:Q92377","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial distribution and morphology protein 12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28F2.06c","synonyms":[{"name":"Spom972h-mdm12","type":"exact"},{"name":"mitochondrial inheritance component mdm12 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q92377"}


id: MONDO:0020195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete excretory apparatus of the lacrimal system anomaly (obsolete MONDO:0020195)","secondary_identifiers":["Orphanet:98605"],"termid":"MONDO:0020195","xrefs":{"Monarch":{"xref_id":"0020195"}}}


id: MONDO:0016431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of axonal Charcot-Marie-Tooth disease, a peripheral motor and sensory neuropathy. CMT2M is characterized by congenital ptosis and early cataract associated to a mildly progressive peripheral neuropathy of variable onset from birth to the 6th decade, pes cavus, reduced to absent ankles tendon reflexes and sometimes neutropenia.","definition_xrefs":["Orphanet:228179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease dominant intermediate B","termid":"MONDO:0011674"},{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant Charcot-Marie-Tooth disease type 2M","secondary_identifiers":["MEDGEN:930341","SCTID:719514002","icd11.foundation:1601555981","UMLS:C4304672","GARD:17147"],"synonyms":[{"name":"CMT2M","type":"exact"}],"termid":"MONDO:0016431","xrefs":{"Monarch":{"xref_id":"0016431"}}}


id: PBO:0065886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB34, member RAS oncogene family","termid":"PBO:0065886"}


id: GO:0046797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The refolding and structural rearrangements of individual capsid subunits to transition from the intermediate procapsid, to the more stable capsid structure.","definition_xrefs":["GOC:bf","PMID:19204733","PMID:10627558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"viral capsid assembly","termid":"GO:0019069"},{"relation_name":"part_of","term_name":"virus maturation","termid":"GO:0019075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"viral procapsid maturation","secondary_identifiers":["UniProtKB-KW:KW-1273"],"synonyms":[{"name":"capsid maturation","type":"exact"},{"name":"viral capsid maturation","type":"exact"},{"name":"virion maturation","type":"broad"}],"termid":"GO:0046797"}


id: GO:0032081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops or reduces the rate of type II restriction endodeoxyribonuclease activity.","definition_xrefs":["GOC:tb","GOC:mah","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of type II site-specific deoxyribonuclease activity (obsolete GO:0032081)","synonyms":[{"name":"down regulation of type II restriction endodeoxyribonuclease activity","type":"exact"},{"name":"down-regulation of type II restriction endodeoxyribonuclease activity","type":"exact"},{"name":"downregulation of type II restriction endodeoxyribonuclease activity","type":"exact"},{"name":"inhibition of type II restriction endodeoxyribonuclease activity","type":"narrow"},{"name":"negative regulation of type II restriction endodeoxyribonuclease activity","type":"exact"},{"name":"type II restriction endodeoxyribonuclease inhibitor","type":"related"},{"name":"type II restriction enzyme inhibitor","type":"related"}],"termid":"GO:0032081"}


id: PBO:0045166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member A1","termid":"PBO:0045166"}


id: GO:0046454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dimethylsilanediol, the smallest member of the dialkylsilanediols. Dimethylsilanediol is the monomer of polydimethylsiloxane, a compound which can be found in a wide range of industrial and consumer products.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organosilicon metabolic process","termid":"GO:0018945"},{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dimethylsilanediol metabolic process","synonyms":[{"name":"dimethylsilanediol metabolism","type":"exact"}],"termid":"GO:0046454"}


id: GO:0000248
data:
  {"annotated_genes":["SJAG_00717","SJAG_03509"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77070,80815],"is_not":false,"summary":null,"term":"GO:0000248"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,7,24(28)-ergostatrienol + O2 + NADPH = 5,7,22,24(28)-ergostatetraenol + 2 H2O + NADP+.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol desaturase activity","termid":"GO:0070704"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00717":null,"SJAG_03509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"C-5 sterol desaturase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-6807053","Reactome:R-HSA-195664"],"synonyms":[{"name":"sterol-C5-desaturase activity","type":"exact"}],"termid":"GO:0000248","terms_by_termid":{"GO:0000248":null}}


id: PBO:0028240
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleus","termid":"PBO:0028240"}


id: PBO:0047786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box D4 like 3","termid":"PBO:0047786"}


id: MONDO:1012064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Ancon dwarfism, non-human animal","termid":"MONDO:1011941"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ancon dwarfism, sheep","secondary_identifiers":["OMIA:000302-9940"],"termid":"MONDO:1012064","xrefs":{"Monarch":{"xref_id":"1012064"}}}


id: GO:1905599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of low-density lipoprotein receptor activity.","definition_xrefs":["GO_REF:0000059","GOC:BHF","GOC:nc","GOC:TermGenie","PMID:22848640"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of low-density lipoprotein receptor activity (obsolete GO:1905599)","synonyms":[{"name":"activation of LDL receptor","type":"narrow"},{"name":"activation of LDLR activity","type":"narrow"},{"name":"activation of low-density lipoprotein receptor activity","type":"narrow"},{"name":"positive regulation of LDL receptor","type":"exact"},{"name":"positive regulation of LDLR activity","type":"exact"},{"name":"up regulation of LDL receptor","type":"exact"},{"name":"up regulation of LDLR activity","type":"exact"},{"name":"up regulation of low-density lipoprotein receptor activity","type":"exact"},{"name":"up-regulation of LDL receptor","type":"exact"},{"name":"up-regulation of LDLR activity","type":"exact"},{"name":"up-regulation of low-density lipoprotein receptor activity","type":"exact"},{"name":"upregulation of LDL receptor","type":"exact"},{"name":"upregulation of LDLR activity","type":"exact"},{"name":"upregulation of low-density lipoprotein receptor activity","type":"exact"}],"termid":"GO:1905599"}


id: FYPO:0003593
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of ubiquitin-dependent protein degradation with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome, is abolished.","definition_xrefs":["PomBase:mah","GO:0031145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein modification during vegetative growth","termid":"FYPO:0000544"},{"relation_name":"is_a","term_name":"decreased anaphase-promoting complex-dependent protein catabolic process","termid":"FYPO:0003585"},{"relation_name":"is_a","term_name":"abolished proteolysis during vegetative growth","termid":"FYPO:0005377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001320","FYPO:0002494","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished anaphase-promoting complex-dependent protein catabolic process","synonyms":[{"name":"abolished anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"abolished anaphase-promoting complex-dependent protein catabolic process during mitotic cell cycle","type":"related"},{"name":"abolished anaphase-promoting complex-dependent protein catabolic process during vegetative growth","type":"exact"},{"name":"abolished anaphase-promoting complex-dependent protein degradation","type":"exact"},{"name":"anaphase-promoting complex-dependent protein catabolic process abolished","type":"exact"}],"termid":"FYPO:0003593"}


id: PBO:0015713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc48p-Npl4p-Vms1p AAA ATPase complex subunit involved in ER associated ubiquitin-dependent protein catabolic process Vms1 (predicted)","termid":"PBO:0015713"}


id: GO:0070135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-1,2-linked oligomannosides, which are found in fungal cell wall phosphopeptidomannan and phospholipomannan.","definition_xrefs":["GOC:mah","PMID:18234669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannan metabolic process","termid":"GO:0010412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0005975"],"is_obsolete":false,"name":"beta-1,2-oligomannoside metabolic process","synonyms":[{"name":"beta-1,2-oligomannoside metabolism","type":"exact"}],"termid":"GO:0070135"}


id: PBO:0006172
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_target_cell","termid":"PBO:0006172"}


id: MONDO:0015324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cataract-intellectual disability-anal atresia-urinary defects syndrome is characterized by congenital cataracts with squint, intellectual deficit, anomalies of the genitourinary tract (rectovesical fistula, micropenis, undescended testis, and hypospadias), imperforate anus and other anomalies.","definition_xrefs":["Orphanet:1381"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cataract-intellectual disability-anal atresia-urinary defects syndrome","secondary_identifiers":["SCTID:715989002","UMLS:C2931391","MEDGEN:419068","MESH:C537009","GARD:192"],"synonyms":[{"name":"Karandikar Maria Kamble syndrome","type":"related"},{"name":"Karandikar-Maria-Kamble syndrome","type":"exact"},{"name":"cataract intellectual disability anal atresia urinary defects","type":"related"},{"name":"cataract mental retardation anal atresia urinary defects","type":"related"},{"name":"congenital cataract with multiple congenital anomalies in a sibship","type":"related"}],"termid":"MONDO:0015324","xrefs":{"Monarch":{"xref_id":"0015324"}}}


id: GO:0035979
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H2AX-serine (position 139) + ATP = histone H2AX-phosphoserine (position 139) + ADP. This reaction is the addition of a phosphate group to the serine residue at position 139 of histone variant H2AX.","definition_xrefs":["PMID:11893489","PMID:16061642","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"histone H2AX kinase activity","termid":"GO:0141003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016740","GO:0016301","GO:0003674","GO:0004672"],"is_obsolete":false,"name":"histone H2AXS139 kinase activity","synonyms":[{"name":"histone H2AS139 kinase activity","type":"related"},{"name":"histone kinase activity (H2A-S139 specific)","type":"related"},{"name":"histone kinase activity (H2A.x-S139 specific)","type":"narrow"}],"termid":"GO:0035979"}


id: MONDO:0019904
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ring chromosome 3 syndrome is a rare chromosomal anomaly syndrome with a highly variable phenotype principally characterized by pre- and postnatal growth retardation, short stature, developmental delay, mild to severe intellectual disability, microcephaly and mild dysmorphic features (incl. triangular face, dysplastic ears, upslanting palpebral fissures, epicanthic folds, broad nasal bridge, full nasal tip, long philtrum, downturned corners of the mouth, and micro/retrognathia). Additional manifestations reported include hypotonia, mild articular limitation, hearing loss, digital anomalies (i.e. clinodacytyly, brachydactyly), café-au-lait patches and hypospadias.","definition_xrefs":["Orphanet:96172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 3 disorder","termid":"MONDO:0700010"},{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring chromosome 3","secondary_identifiers":["GARD:10839","MEDGEN:1643677","SCTID:765486004","UMLS:C4707449","NCIT:C121982"],"synonyms":[{"name":"R3","type":"related"},{"name":"Ring 3","type":"related"},{"name":"Ring chromosome 3 syndrome","type":"related"},{"name":"Ring chromosome type 3","type":"exact"},{"name":"chromosome 3 ring","type":"related"},{"name":"rose cluster 3","type":"exact"}],"termid":"MONDO:0019904","xrefs":{"Monarch":{"xref_id":"0019904"}}}


id: MONDO:0014450
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any isolated congenital breast hypoplasia/aplasia in which the cause of the disease is a mutation in the PTPRF gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isolated congenital breast hypoplasia/aplasia","termid":"MONDO:0015855"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breasts and/or nipples, aplasia or hypoplasia of, 2","secondary_identifiers":["GARD:16044","UMLS:C4014918","MEDGEN:863355","OMIM:616001"],"synonyms":[{"name":"BNAH2","type":"related"},{"name":"PTPRF isolated congenital breast hypoplasia/aplasia","type":"exact"},{"name":"breasts and/or nipples, aplasia or hypoplasia of, 2","type":"exact"},{"name":"breasts and/or nipples, aplasia or hypoplasia of, type 2","type":"exact"},{"name":"isolated congenital breast hypoplasia/aplasia caused by mutation in PTPRF","type":"exact"}],"termid":"MONDO:0014450","xrefs":{"Monarch":{"xref_id":"0014450"}}}


id: GO:0098861
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A parallel bundle of actin filaments that is part of filopodium. Filaments are oriented such that the plus (barbed) ends are at the tip of the protrusion, capped by a tip complex.","definition_xrefs":["PMID:12566431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle of actin-based cell projection","termid":"GO:0098859"},{"relation_name":"part_of","term_name":"filopodium","termid":"GO:0030175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0005575","GO:0015629"],"is_obsolete":false,"name":"actin filament bundle of filopodium","termid":"GO:0098861"}


id: PBO:0038552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABHD17A pseudogene 7","termid":"PBO:0038552"}


id: PBO:0088594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB/POZ family ubiquitin-type ligase substrate adaptor Btb2","termid":"PBO:0088594"}


id: MONDO:0700340
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rare congenital urological condition, subtype of buried penis, characterized by redundant inner prepuce, phimosis and deficient penile skin, leading to ballooning foreskin that can trap urine, and characterized by an abnormally large, ballooning foreskin that can trap urine, leading to ballooning during urination, difficulty emptying the bladder, and recurrent infections.","definition_xrefs":["PMID:23116700","PMID:31301977","PMID:31218089","PMID:33475444","PMID:30878211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male reproductive system disorder","termid":"MONDO:0003150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital megaprepuce","synonyms":[{"name":"CMP","type":"exact"}],"termid":"MONDO:0700340","xrefs":{"Monarch":{"xref_id":"0700340"}}}


id: GO:0004153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydropterin + H2O = 7,8-dihydrolumazine + NH3.","definition_xrefs":["PMID:19567870","PMID:38786926","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"dihydropterin deaminase activity","secondary_identifiers":["MetaCyc:RXN-15261"],"termid":"GO:0004153"}


id: CHEBI:37903
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysyl group","termid":"CHEBI:37903"}


id: GO:1904648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a rotenone stimulus.","definition_xrefs":["GO_REF:0000071","PMID:18538940","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"},{"relation_name":"is_a","term_name":"response to rotenone","termid":"GO:1904647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to rotenone","termid":"GO:1904648"}


id: PBO:0088179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc-binding mitochondrial intermembrane space (IMS) protein; involved in a disulfide relay system for IMS import of cysteine-containing proteins; binds Mia40p and stimulates its Erv1p-dependent oxidation, probably by sequestering zinc","termid":"PBO:0088179"}


id: PR:000027567
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mei2 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis protein mei2","synonyms":[{"name":"mei2","type":"exact"}],"termid":"PR:000027567"}


id: MONDO:0015690
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, malignant, neoplastic disease characterized by clonal proliferation of myeloid and/or lymphoid precursors harboring rearrangements in the PDGFRB gene, in the blood, bone marrow and often other tissues as well (spleen, lymph nodes, skin, etc.). It usually presents as chronic myelomonocytic leukemia with eosinophilia, chronic eosinophilic leukemia, atypical chronic myelogenous leukemia, juvenile myelomonocytic leukemia, myelodysplastic syndrome, acute myeloid leukemia or acute lymphoblastic leukemia. Patients usually present with anemia, leukocytosis, monocytosis, eosinophilia and/or splenomegaly, or systemic symptoms, such as fever, sweating and/or weight loss.","definition_xrefs":["Orphanet:168950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid/lymphoid neoplasms associated with eosinophilia and abnormality of PDGFRA, PDGFRB, FGFR1 or JAK2","termid":"MONDO:0015688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"myeloid neoplasm associated with PDGFRB rearrangement","secondary_identifiers":["MEDGEN:758646","DOID:0080166","UMLS:C3472621","ICDO:9966/3","SCTID:724642009","GARD:20107","NCIT:C84276","ONCOTREE:MLNPDGFRB","icd11.foundation:625932159"],"synonyms":[{"name":"myeloid and lymphoid neoplasms with PDGFRB rearrangement","type":"exact"},{"name":"myeloid neoplasms associated with PDGFRB rearrangement","type":"exact"},{"name":"myeloid neoplasms with PDGFRB rearrangement","type":"exact"},{"name":"myeloid/lymphoid neoplasm associated with PDGFRB rearrangement","type":"related"},{"name":"myeloid/lymphoid neoplasms with PDGFRB rearrangement","type":"exact"}],"termid":"MONDO:0015690","xrefs":{"Monarch":{"xref_id":"0015690"}}}


id: MONDO:0011139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"diabetic embryopathy","termid":"MONDO:0016018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preaxial hallucal polydactyly","secondary_identifiers":["MESH:C566632","OMIM:601759","UMLS:C1866339","MEDGEN:356507"],"synonyms":[{"name":"preaxial hallucal polydactyly","type":"exact"}],"termid":"MONDO:0011139","xrefs":{"Monarch":{"xref_id":"0011139"}}}


id: MONDO:0015407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cerebrofacial arteriovenous metameric syndrome","termid":"MONDO:0015405"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebrofacial arteriovenous metameric syndrome type 3","secondary_identifiers":["GARD:19960","MEDGEN:824537","UMLS:C3838691","Orphanet:141199","SCTID:703268008","icd11.foundation:1048965538"],"synonyms":[{"name":"CAMS3","type":"exact"}],"termid":"MONDO:0015407","xrefs":{"Monarch":{"xref_id":"0015407"}}}


id: PBO:0083018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleted ORF; does not encode a discrete protein; YFR024C was originally annotated as a separate ORF, but was later removed because it was demonstrated to be theC-terminus of LSB3/YFR024C-A","termid":"PBO:0083018"}


id: PR:Q9URW3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPJ691.02 gene.","definition_xrefs":["UniProtKB:Q9URW3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein yippee-like PJ691.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPJ691.02","synonyms":[{"name":"Spom972h-SPAPJ691.02","type":"exact"}],"termid":"PR:Q9URW3"}


id: PBO:0056127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LysM domain containing 4","termid":"PBO:0056127"}


id: MONDO:0011247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jejunal atresia with renal adysplasia","secondary_identifiers":["OMIM:602551","MEDGEN:400708","UMLS:C1865209","MESH:C537567"],"synonyms":[{"name":"jejunal atresia with renal adysplasia","type":"exact"}],"termid":"MONDO:0011247","xrefs":{"Monarch":{"xref_id":"0011247"}}}


id: PR:Q9P792
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nbr1 gene.","definition_xrefs":["UniProtKB:Q9P792","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZZ-type zinc finger-containing protein P35G2.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.11c","synonyms":[{"name":"Spom972h-nbr1","type":"exact"}],"termid":"PR:Q9P792"}


id: PBO:0057208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 376b","termid":"PBO:0057208"}


id: PBO:0055251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2678","termid":"PBO:0055251"}


id: MONDO:0032569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated congenital growth hormone deficiency","termid":"MONDO:0000050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"isolated growth hormone deficiency, type 5","secondary_identifiers":["OMIM:618160","MEDGEN:1648500","UMLS:C4748435"],"synonyms":[{"name":"IGHD5","type":"related"},{"name":"ISOLATED GROWTH HORMONE DEFICIENCY, TYPE V","type":"related"},{"name":"pituitary hormone deficiency, combined or isolated, 7","type":"exact"}],"termid":"MONDO:0032569","xrefs":{"Monarch":{"xref_id":"0032569"}}}


id: FYPO:0003310
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which IMP cyclohydrolase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal IMP cyclohydrolase activity","termid":"FYPO:0003309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abolished IMP cyclohydrolase activity","synonyms":[{"name":"IMP cyclohydrolase activity abolished","type":"exact"}],"termid":"FYPO:0003310"}


id: PBO:0081666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 587B","termid":"PBO:0081666"}


id: PBO:0067077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 108, pseudogene","termid":"PBO:0067077"}


id: PBO:0044434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily A member 43, pseudogene","termid":"PBO:0044434"}


id: PBO:0046750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 5","termid":"PBO:0046750"}


id: GO:0052504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of callose deposition by the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of defense-related symbiont callose deposition (obsolete GO:0052504)","synonyms":[{"name":"induction by organism of defense-related papilla formation in symbiont","type":"narrow"},{"name":"induction by organism of defense-related symbiont callose deposition","type":"narrow"},{"name":"positive regulation by organism of defense-related papilla formation in symbiont","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont callose deposition","type":"exact"}],"termid":"GO:0052504"}


id: PBO:0025453
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast cancer","termid":"PBO:0025453"}


id: MONDO:0044033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or subacute reversible condition characterized by headaches, mental status changes, visual disturbances, and seizures associated with imaging findings of posterior leukoencephalopathy. It has been observed in association with hypertensive encephalopathy, eclampsia, and immunosuppressive and cytotoxic drug treatment.","definition_xrefs":["NCIT:C78598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hypertensive encephalopathy","termid":"MONDO:0006796"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posterior leukoencephalopathy syndrome","secondary_identifiers":["SCTID:450886002","UMLS:C0878576","ICD10CM:I67.83","MEDGEN:163898","MESH:D054038"],"synonyms":[{"name":"PRES","type":"exact"},{"name":"Posterior reversible encephalopathy syndrome","type":"exact"},{"name":"RPLE","type":"exact"},{"name":"leukoencephalopathy syndrome, Posterior","type":"related"},{"name":"leukoencephalopathy syndromes, Posterior","type":"related"},{"name":"posterior reversible encephalopathy syndrome","type":"exact"},{"name":"reversible Posterior cerebral edema syndrome","type":"exact"},{"name":"reversible Posterior cerebral oedema syndrome","type":"exact"},{"name":"reversible Posterior leukoencephalopathy syndrome","type":"exact"},{"name":"reversible occipital parietal encephalopathy","type":"exact"},{"name":"reversible posterior leukoencephalopathy syndrome","type":"exact"},{"name":"syndrome, Posterior leukoencephalopathy","type":"related"},{"name":"syndromes, Posterior leukoencephalopathy","type":"related"}],"termid":"MONDO:0044033","xrefs":{"Monarch":{"xref_id":"0044033"}}}


id: SO:0001240
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The region of a gene from the 5' most TSS to the 3' TSS.","definition_xrefs":["BBOP:nw"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001240 TSS_region (obsolete SO:0001240)","synonyms":[{"name":"TSS region","type":"exact"}],"termid":"SO:0001240"}


id: PBO:0055379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2809","termid":"PBO:0055379"}


id: GO:0019462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of glutamine into fumarate, beginning with conversion of glutamine into glutamate catalyzed by the enzyme glutaminase (EC:3.5.1.2).","definition_xrefs":["GOC:bf","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamine catabolic process to fumarate, using glutaminase (obsolete GO:0019462)","synonyms":[{"name":"glutamate catabolic process to fumarate, using glutaminase","type":"related"},{"name":"glutamine breakdown to fumarate, using glutaminase","type":"exact"},{"name":"glutamine degradation to fumarate, using glutaminase","type":"narrow"}],"termid":"GO:0019462"}


id: PATO:0000266
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000266 absolute visual_acuity (obsolete PATO:0000266)","termid":"PATO:0000266"}


id: PBO:0044558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein assembly factor with WD repeats 1","termid":"PBO:0044558"}


id: PBO:0072445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 9","termid":"PBO:0072445"}


id: GO:0018479
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzaldehyde + NAD+ + H2O = benzoate + NADH + H+.","definition_xrefs":["EC:1.2.1.28"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"benzaldehyde dehydrogenase (NAD+) activity","secondary_identifiers":["RHEA:11840","UM-BBD_reactionID:r0269","MetaCyc:BENZALDEHYDE-DEHYDROGENASE-NAD+-RXN"],"synonyms":[{"name":"benzaldehyde (NAD) dehydrogenase activity","type":"related"},{"name":"benzaldehyde:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0018479"}


id: MONDO:0016843
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"20q13.33 is a rare chromosomal anomaly syndrome resulting from the partial deletion of the long arm of chromosome 20 with a highly variable phenotype typically characterized by hypotonia, intellectual disability, cognitive and language deficits (including decreased or absent speech), pre and post-natal growth retardation, feeding difficulties, microcephaly, and malformed hands and feet. Neurodevelopmental disorders (including hyperactivity, social interactive problems and autism spectrum disorder), seizures and dysmorphic facial features (high forehead, hypertelorism, malformed ears, broad nasal bridge, bulbous nasal tip, thin upper lip, small chin) are frequently associated.","definition_xrefs":["Orphanet:261311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 20","termid":"MONDO:0016918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20q13.33 microdeletion syndrome","secondary_identifiers":["UMLS:C4518823","GARD:20778","MEDGEN:1384661","SCTID:733520002"],"synonyms":[{"name":"Del(20)(q13.33)","type":"exact"},{"name":"monosomy 20q13.33","type":"exact"}],"termid":"MONDO:0016843","xrefs":{"Monarch":{"xref_id":"0016843"}}}


id: PR:P0CT43
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-8 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19D5.09c","synonyms":[{"name":"Spom972h-Tf2-8","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT43"}


id: MONDO:0859518
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"leukodystrophy, hypomyelinating, 26, with chondrodysplasia","secondary_identifiers":["MEDGEN:1840948","UMLS:C5830312","DOID:0070403","OMIM:620269"],"termid":"MONDO:0859518","xrefs":{"Monarch":{"xref_id":"0859518"}}}


id: FYPO:0007201
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actin cortical patch localization to the site of cell division is decreased.","definition_xrefs":["PMID:30201262","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased rate of actin cortical patch localization","termid":"FYPO:0006176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0004803"],"is_obsolete":false,"name":"decreased rate of actin cortical patch localization to cell division site","synonyms":[{"name":"decreased rate of actin cortical patch localisation to cell division site","type":"exact"},{"name":"decreased rate of actin cortical patch localization to cell division site during mitotic cell cycle","type":"related"},{"name":"decreased rate of actin cortical patch localization to cell division site during vegetative growth","type":"exact"},{"name":"decreased rate of actin cortical patch movement to cell division site","type":"related"},{"name":"decreased rate of actin patch localization to cell division site","type":"exact"},{"name":"reduced rate of actin cortical patch localization to cell division site","type":"exact"}],"termid":"FYPO:0007201"}


id: PBO:0052355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 5B","termid":"PBO:0052355"}


id: PBO:0055674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIPC antisense RNA 1","termid":"PBO:0055674"}


id: GO:0005166
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neurotrophin p75 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotrophin receptor binding","termid":"GO:0005165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"neurotrophin p75 receptor binding","synonyms":[{"name":"neurotrophin p75 receptor ligand","type":"narrow"}],"termid":"GO:0005166"}


id: GO:1903703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of an enterocyte.","definition_xrefs":["GO_REF:0000086","GOC:TermGenie","PMID:16782882","Wikipedia:List_of_intestinal_epithelial_differentiation_genes"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal epithelial cell differentiation","termid":"GO:0060575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"enterocyte differentiation","termid":"GO:1903703"}


id: MONDO:0045069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the minor salivary glands. Representative examples include adenoid cystic carcinoma, acinic cell carcinoma, polymorphous low grade adenocarcinoma, and mucinous adenocarcinoma.","definition_xrefs":["NCIT:C5957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland carcinoma","termid":"MONDO:0000521"},{"relation_name":"is_a","term_name":"malignant tumor of minor salivary gland","termid":"MONDO:0021316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"minor salivary gland carcinoma","secondary_identifiers":["MEDGEN:233710","UMLS:C1334771"],"synonyms":[{"name":"carcinoma of minor salivary gland","type":"exact"},{"name":"carcinoma of the minor salivary gland","type":"exact"},{"name":"minor salivary gland cancer","type":"exact"},{"name":"minor salivary gland carcinoma","type":"exact"}],"termid":"MONDO:0045069","xrefs":{"Monarch":{"xref_id":"0045069"}}}


id: GO:0051796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of timing of catagen, the regression phase of the hair cycle.","definition_xrefs":["GOC:pr","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hair follicle maturation","termid":"GO:0048817"},{"relation_name":"is_a","term_name":"regulation of timing of catagen","termid":"GO:0051794"},{"relation_name":"negatively_regulates","term_name":"catagen","termid":"GO:0042637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of timing of catagen","synonyms":[{"name":"down regulation of catagen","type":"related"},{"name":"down-regulation of catagen","type":"related"},{"name":"downregulation of catagen","type":"related"},{"name":"inhibition of catagen","type":"narrow"},{"name":"negative regulation of catagen","type":"related"}],"termid":"GO:0051796"}


id: PBO:0055343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2771","termid":"PBO:0055343"}


id: PBO:0065272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRR34 long non-coding RNA","termid":"PBO:0065272"}


id: PBO:0045703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity tyrosine phosphorylation regulated kinase 2","termid":"PBO:0045703"}


id: GO:0071993
data:
  {"annotated_genes":["SJAG_05213","SJAG_03497","SJAG_01344"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[120073,98864,97889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036246"}]},"cv_name":"biological_process","definition":"The directed movement of a phytochelatin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Phytochelatins are a group of peptides that bind metals (Cd, Zn, Cu, Pb, Hg) in thiolate coordination complexes.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_03497":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"phytochelatin transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cadystin transport","type":"related"}],"termid":"GO:0071993","terms_by_termid":{"GO:0036246":null}}


id: GO:0001312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Replication of rDNA following its excision from the chromosome of dividing cells as they age. Extrachromosomal rDNA forms a circle that contains at least one autonomously replicating sequence (ARS), which supports replication independent of chromosomal replication.","definition_xrefs":["PMID:12044934","GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete replication of extrachromosomal rDNA circles involved in replicative cell aging (obsolete GO:0001312)","synonyms":[{"name":"replication of extrachromosomal rDNA circles during replicative cell ageing","type":"related"},{"name":"replication of extrachromosomal rDNA circles during replicative cell aging","type":"related"},{"name":"replication of extrachromosomal ribosomal DNA circles during replicative cell aging","type":"related"}],"termid":"GO:0001312"}


id: PR:Q8NIL3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized isomerase YddE that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02323","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense-enhancing sequence 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB21E7.07","secondary_identifiers":["UniProtKB:Q8NIL3"],"synonyms":[{"name":"AES factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-yddE","type":"exact"}],"termid":"PR:Q8NIL3"}


id: MONDO:1012534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary surfactant metabolism dysfunction, non-human animal","termid":"MONDO:1011933"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary surfactant metabolism dysfunction, dog","secondary_identifiers":["OMIA:002251-9615"],"termid":"MONDO:1012534","xrefs":{"Monarch":{"xref_id":"1012534"}}}


id: GO:1900086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of peptidyl-tyrosine autophosphorylation.","definition_xrefs":["GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein autophosphorylation","termid":"GO:0031954"},{"relation_name":"is_a","term_name":"positive regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050731"},{"relation_name":"is_a","term_name":"regulation of peptidyl-tyrosine autophosphorylation","termid":"GO:1900084"},{"relation_name":"positively_regulates","term_name":"peptidyl-tyrosine autophosphorylation","termid":"GO:0038083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of peptidyl-tyrosine autophosphorylation","synonyms":[{"name":"activation of peptidyl-tyrosine autophosphorylation","type":"narrow"},{"name":"activation of receptor tyrosine kinase autophosphorylation","type":"narrow"},{"name":"activation of tyrosine autophosphorylation","type":"narrow"},{"name":"positive regulation of receptor tyrosine kinase autophosphorylation","type":"narrow"},{"name":"positive regulation of tyrosine autophosphorylation","type":"exact"},{"name":"up regulation of peptidyl-tyrosine autophosphorylation","type":"exact"},{"name":"up regulation of receptor tyrosine kinase autophosphorylation","type":"narrow"},{"name":"up regulation of tyrosine autophosphorylation","type":"exact"},{"name":"up-regulation of peptidyl-tyrosine autophosphorylation","type":"exact"},{"name":"up-regulation of receptor tyrosine kinase autophosphorylation","type":"narrow"},{"name":"up-regulation of tyrosine autophosphorylation","type":"exact"},{"name":"upregulation of peptidyl-tyrosine autophosphorylation","type":"exact"},{"name":"upregulation of receptor tyrosine kinase autophosphorylation","type":"narrow"},{"name":"upregulation of tyrosine autophosphorylation","type":"exact"}],"termid":"GO:1900086"}


id: PBO:0078789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 12-1","termid":"PBO:0078789"}


id: GO:0042498
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a lipopeptide containing a nonprotein moiety consisting of two acyl groups.","definition_xrefs":["PMID:12077222","PMID:12524386","GOC:add","PMID:2757794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipopeptide binding","termid":"GO:0071723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"diacyl lipopeptide binding","synonyms":[{"name":"bacterial diacyl lipopeptide binding","type":"narrow"},{"name":"bacterial diacyl lipoprotein binding","type":"related"},{"name":"diacylated lipopeptide binding","type":"exact"}],"termid":"GO:0042498"}


id: PBO:0091600
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cor-C? is nse6","termid":"PBO:0091600"}


id: MONDO:0025061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute disease of young pigs that is usually associated with weaning. It is characterized clinically by paresis and subcutaneous edema.","definition_xrefs":["MESH:D004488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swine disease","termid":"MONDO:0024990"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"edema disease of swine","synonyms":[{"name":"swine edema disease","type":"related"},{"name":"swine edema diseases","type":"related"},{"name":"swine oedema disease","type":"related"},{"name":"swine oedema diseases","type":"related"}],"termid":"MONDO:0025061","xrefs":{"Monarch":{"xref_id":"0025061"}}}


id: FYPO:0001902
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cytoplasmic mRNA processing bodies (P-bodies) are smaller than normal when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small P-bodies","termid":"FYPO:0001900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"small P-bodies during glucose starvation","synonyms":[{"name":"decreased P-body formation during glucose starvation","type":"related"},{"name":"small P bodies during glucose starvation","type":"exact"},{"name":"small P-bodies during glucose depletion","type":"exact"},{"name":"small P-bodies during glucose deprivation","type":"exact"},{"name":"small P-bodies during glucose limitation","type":"related"},{"name":"small P-body during glucose starvation","type":"exact"},{"name":"small cytoplasmic mRNA processing bodies during glucose starvation","type":"exact"}],"termid":"FYPO:0001902"}


id: PATO:0001998
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of its visibility.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative","termid":"PATO:0000068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conspicuousness","termid":"PATO:0001998"}


id: MONDO:0018150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gaucher disease (GD) is a lysosomal storage disorder encompassing three main forms (types 1, 2 and 3), a fetal form and a variant with cardiac involvement (Gaucher disease - ophthalmoplegia - cardiovascular calcification or Gaucher-like disease).","definition_xrefs":["Orphanet:355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"sphingolipidosis","termid":"MONDO:0019255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0002561","MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"Gaucher disease","secondary_identifiers":["ICD10CM:E75.22","MEDGEN:42164","MESH:D005776","NORD:1177","GARD:8233","NCIT:C61268","NANDO:2200562","icd11.foundation:1923566939","MedDRA:10018048","NANDO:1200056","SCTID:190794006","DOID:1926","UMLS:C0017205"],"synonyms":[{"name":"Gaucher disease","type":"exact"},{"name":"Gaucher splenomegaly","type":"related"},{"name":"Gaucher syndrome","type":"exact"},{"name":"Gaucher's disease","type":"exact"},{"name":"acid beta-glucosidase deficiency","type":"exact"},{"name":"acute cerebral Gaucher disease","type":"narrow"},{"name":"cerebroside lipidosis syndrome","type":"related"},{"name":"glocucerebrosidase deficiency","type":"exact"},{"name":"glucocerebrosidase deficiency","type":"exact"},{"name":"glucocerebrosidosis","type":"exact"},{"name":"glucosyl cerebroside lipidosis","type":"related"},{"name":"glucosylceramidase deficiency","type":"exact"},{"name":"glucosylceramide beta-glucosidase deficiency","type":"exact"},{"name":"kerasin histiocytosis","type":"related"},{"name":"kerasin lipoidosis","type":"related"},{"name":"kerasin thesaurismosis","type":"exact"},{"name":"lipoid histiocytosis (kerasin type)","type":"exact"},{"name":"sphingolipidosis 1","type":"related"}],"termid":"MONDO:0018150","xrefs":{"Monarch":{"xref_id":"0018150"}}}


id: PBO:0003563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-endonuclease Apn2","termid":"PBO:0003563"}


id: PBO:0027817
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_arginine_catabolism_gene_mRNA_during_vegetative_growth","termid":"PBO:0027817"}


id: PBO:0079536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uveal autoantigen with coiled-coil domains and ankyrin repeats","termid":"PBO:0079536"}


id: MONDO:0017798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spigelian hernia-cryptorchidism syndrome","secondary_identifiers":["MEDGEN:1662076","Orphanet:314432","GARD:21371","UMLS:C4751074"],"termid":"MONDO:0017798","xrefs":{"Monarch":{"xref_id":"0017798"}}}


id: _global:results_in_movement_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"Holds between p and c when p is locomotion process and the outcome of this process is the change of location of c","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"results_in_changes_to_anatomical_or_cellular_structure","termid":"_global:results_in_changes_to_anatomical_or_cellular_structure"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_movement_of","secondary_identifiers":["RO:0002565","GOREL:0001001"],"termid":"_global:results_in_movement_of"}


id: MONDO:0015272
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Camptodactyly-taurinuria syndrome is a congenital malformation syndrome characterized by the association of a permanent camptodactyly of the fingers with the over excretion of taurine in the urine. Camptodactyly mainly affects the little finger, although any finger may be involved. The disease has been described in 17 affected patients from 4 unrelated families. An autosomal dominant inheritance has been suggested. There have been no further descriptions in the literature since 1966.","definition_xrefs":["Orphanet:1325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"camptodactyly-taurinuria syndrome","secondary_identifiers":["GARD:1069","MESH:C537972","MEDGEN:419871","SCTID:733466005","UMLS:C2931681"],"synonyms":[{"name":"camptodactyly taurinuria","type":"related"},{"name":"camptodactyly with taurinuria","type":"related"},{"name":"familial streblodactyly with amino-aciduria","type":"exact"}],"termid":"MONDO:0015272","xrefs":{"Monarch":{"xref_id":"0015272"}}}


id: MONDO:0859206
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hearing loss and spasticity","secondary_identifiers":["MEDGEN:1794234","Orphanet:659975","OMIM:619616","UMLS:C5562024"],"termid":"MONDO:0859206","xrefs":{"Monarch":{"xref_id":"0859206"}}}


id: PBO:0046591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K3 member 1","termid":"PBO:0046591"}


id: GO:0033670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of NAD kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to an NAD molecule.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of NAD+ kinase activity (obsolete GO:0033670)","synonyms":[{"name":"NAD kinase regulator","type":"narrow"},{"name":"regulation of NAD kinase activity","type":"exact"}],"termid":"GO:0033670"}


id: PBO:0090326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lgl family protein Sro7","termid":"PBO:0090326"}


id: PBO:0060941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor, erythroid 2 like 3 pseudogene 1","termid":"PBO:0060941"}


id: MONDO:0004667
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare malignant neoplasm that arises from the sublingual gland. The majority are carcinomas.","definition_xrefs":["NCIT:C3527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sublingual gland neoplasm","termid":"MONDO:0021242"},{"relation_name":"is_a","term_name":"major salivary gland cancer","termid":"MONDO:0044743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"sublingual gland cancer","secondary_identifiers":["ICD10CM:C08.1","MEDGEN:102263","UMLS:C0153361","SCTID:363381003","ICD9:142.2","DOID:8849"],"synonyms":[{"name":"cancer of sublingual gland","type":"exact"},{"name":"malignant neoplasm of sublingual gland","type":"exact"},{"name":"malignant neoplasm of the sublingual gland","type":"exact"},{"name":"malignant sublingual gland neoplasm","type":"exact"},{"name":"malignant sublingual gland tumor","type":"exact"},{"name":"malignant sublingual gland tumour","type":"exact"},{"name":"malignant tumor of sublingual gland","type":"exact"},{"name":"malignant tumor of the sublingual gland","type":"exact"},{"name":"malignant tumour of sublingual gland","type":"exact"},{"name":"malignant tumour of the sublingual gland","type":"exact"},{"name":"sublingual gland cancer","type":"exact"}],"termid":"MONDO:0004667","xrefs":{"Monarch":{"xref_id":"0004667"}}}


id: MONDO:0010981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tibia absent - polydactyly - arachnoid cyst syndrome is a very rare constellation of multiple anomalies, including absence or hypoplasia of the tibia.","definition_xrefs":["Orphanet:3328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"absent tibia-polydactyly-arachnoid cyst syndrome","secondary_identifiers":["OMIM:601027","MEDGEN:318725","SCTID:733068001","UMLS:C1832859","MESH:C563403","GARD:5210"],"synonyms":[{"name":"Holmes Collins syndrome","type":"related"},{"name":"Holmes-Collins syndrome","type":"exact"},{"name":"absence/hypoplasia of tibia, polydactyly, retrocerebellar arachnoid cyst, and other anomalies","type":"related"},{"name":"tibia absent polydactyly arachnoid cyst","type":"related"},{"name":"tibia, absence or hypoplasia of, with polydactyly, RETROCEREBELLAR arachnoid cyst, and other anomalies","type":"related"},{"name":"tibia, absence or hypoplasia of, with polydactyly, retrocerebellar arachnoid cyst, and other anomalies","type":"related"}],"termid":"MONDO:0010981","xrefs":{"Monarch":{"xref_id":"0010981"}}}


id: MONDO:0009232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fuhrmann syndrome is mainly characterized by bowing of the femora, aplasia or hypoplasia of the fibulae and poly-, oligo-, and syndactyly.","definition_xrefs":["Orphanet:2854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Fuhrmann syndrome","secondary_identifiers":["DOID:0090067","GARD:2410","OMIM:228930","UMLS:C1856728","SCTID:721296004","MEDGEN:346429","MESH:C538189"],"synonyms":[{"name":"Fuhrmann syndrome","type":"exact"},{"name":"Fuhrmann-Rieger-de Sousa syndrome","type":"exact"},{"name":"bowing of the femurs, aplasia or hypoplasia of the fibula, and digital anomalies","type":"related"},{"name":"fibular aplasia or hypoplasia, femoral bowing and poly-, syn-, and oligodactyly","type":"related"},{"name":"fibular hypoplasia or aplasia-femoral bowing-oligodactyly syndrome","type":"exact"}],"termid":"MONDO:0009232","xrefs":{"Monarch":{"xref_id":"0009232"}}}


id: MONDO:0015998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated ectopia lentis (IEL) is a rare, clinically variable, eye disorder characterized by dislocation of the lens, often causing significant reduction in visual acuity.","definition_xrefs":["Orphanet:1885"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Marfan and Marfan-related disorder","termid":"MONDO:0017310"},{"relation_name":"is_a","term_name":"lens disorder","termid":"MONDO:0001176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated ectopia lentis","secondary_identifiers":["PMID:20141359","MedDRA:10014145","SCTID:74969002","DOID:0111148","GARD:12251","NCIT:C34566","MESH:C536184","UMLS:C1851286","MEDGEN:342716"],"synonyms":[{"name":"IEL","type":"exact"},{"name":"congenital ectopic lens","type":"related"},{"name":"ectopia lentis syndrome","type":"exact"},{"name":"familial ectopia lentis","type":"exact"},{"name":"isolated lens position anomaly","type":"exact"},{"name":"nonsyndromic lens position anomaly","type":"exact"}],"termid":"MONDO:0015998","xrefs":{"Monarch":{"xref_id":"0015998"}}}


id: PBO:0075917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 9","termid":"PBO:0075917"}


id: MONDO:1010951
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial adenomatous polyposis that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial adenomatous polyposis, non-human animal","termid":"MONDO:1010215"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial adenomatous polyposis, pig","secondary_identifiers":["OMIA:001916-9823"],"termid":"MONDO:1010951","xrefs":{"Monarch":{"xref_id":"1010951"}}}


id: PBO:0077466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 185B","termid":"PBO:0077466"}


id: SO:0001491
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The status of a whole genome sequence, with less than 1 error per 100,000 base pairs.","definition_xrefs":["DOI:10.1126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"whole_genome_sequence_status","termid":"SO:0001499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"finished_genome","synonyms":[{"name":"finished","type":"exact"},{"name":"finished genome","type":"exact"}],"termid":"SO:0001491"}


id: GO:1901953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of anterograde dense core granule transport.","definition_xrefs":["GOC:TermGenie","PMID:23358451","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vesicle transport along microtubule","termid":"GO:1901610"},{"relation_name":"is_a","term_name":"regulation of anterograde dense core granule transport","termid":"GO:1901951"},{"relation_name":"is_a","term_name":"positive regulation of dense core granule transport","termid":"GO:1904811"},{"relation_name":"positively_regulates","term_name":"anterograde neuronal dense core vesicle transport","termid":"GO:1990048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of anterograde dense core granule transport","synonyms":[{"name":"activation of anterograde dense core granule transport","type":"narrow"},{"name":"up regulation of anterograde dense core granule transport","type":"exact"},{"name":"up-regulation of anterograde dense core granule transport","type":"exact"},{"name":"upregulation of anterograde dense core granule transport","type":"exact"}],"termid":"GO:1901953"}


id: PBO:0050717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 3","termid":"PBO:0050717"}


id: PATO:0000955
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fertility quality inhering in a bearer by virtue of the bearer's being capable of initiating, sustaining, or supporting reproduction.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fertility","termid":"PATO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fertile","termid":"PATO:0000955"}


id: PBO:0074838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 32A","termid":"PBO:0074838"}


id: FYECO:0000110
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells are first grown in minimal medium lacking nitrogen and are then allowed to recover in rich medium.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrogen starvation and recovery","synonyms":[{"name":"recovery from nitrogen depletion","type":"exact"},{"name":"recovery from nitrogen starvation","type":"exact"}],"termid":"FYECO:0000110"}


id: PBO:0061147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-myc and STAT interactor","termid":"PBO:0061147"}


id: GO:0045808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of establishment of competence for transformation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of competence for transformation","termid":"GO:0045304"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"negatively_regulates","term_name":"establishment of competence for transformation","termid":"GO:0030420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of establishment of competence for transformation","synonyms":[{"name":"down regulation of establishment of competence for transformation","type":"exact"},{"name":"down-regulation of establishment of competence for transformation","type":"exact"},{"name":"downregulation of establishment of competence for transformation","type":"exact"},{"name":"inhibition of establishment of competence for transformation","type":"narrow"},{"name":"inhibitor of the establishment of competence for transformation activity","type":"related"}],"termid":"GO:0045808"}


id: PBO:0041263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q binding protein","termid":"PBO:0041263"}


id: PBO:0039271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldolase, fructose-bisphosphate C","termid":"PBO:0039271"}


id: PATO:0001341
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A S. cerevisiae mating type cells that secrete a pheromone that in alpha haploids stimulates processes that lead to mating.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Saccharomyces cerevisiae mating type","termid":"PATO:0001342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"a mating type (yeast)","synonyms":[{"name":"a","type":"broad"}],"termid":"PATO:0001341"}


id: PBO:0060585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 22, pseudogene","termid":"PBO:0060585"}


id: PBO:0035793
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_export_from_nucleus_during_glucose_starvation","termid":"PBO:0035793"}


id: MONDO:0024268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mycosis that is limited to the stratum corneum and essentially elicits no inflammation.","direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous mycosis","termid":"MONDO:0000254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superficial mycosis","secondary_identifiers":["DOID:0050133","UMLS:C2980104","ICD9:117.9","SCTID:276206000","MEDGEN:755998"],"synonyms":[{"name":"piedra","type":"narrow"},{"name":"steroid-modified tinea infection","type":"exact"},{"name":"stratum corneum of epidermis fungal infectious disease","type":"exact"}],"termid":"MONDO:0024268","xrefs":{"Monarch":{"xref_id":"0024268"}}}


id: GO:0102646
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 14betaH-scalarane-17alpha-19-diol = all-trans-geranylfarnesol + H2O.","definition_xrefs":["PMID:24200803","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"14betaH-scalarane-17alpha-19-diol synthase activity","secondary_identifiers":["MetaCyc:RXN-15759"],"termid":"GO:0102646"}


id: GO:0120273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of macromolecules to form a ciliary centrin arm, a rod-shaped protein complex containing Centrin4 protein that flanks the flagellum attachment zone (FAZ) filament and the quartet microtubules.","definition_xrefs":["GOC:krc","PMID:32675283","GOC:ach"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"cilium assembly","termid":"GO:0060271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"ciliary centrin arm assembly","synonyms":[{"name":"ciliary centrin arm formation","type":"related"}],"termid":"GO:0120273"}


id: PBO:0028298
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-meiosis_and_sporulation_in_haploid_during_nitrogen_starvation","termid":"PBO:0028298"}


id: MONDO:0011404
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Caronte","secondary_identifiers":["MEDGEN:349004","OMIM:604172","UMLS:C1858724"],"synonyms":[{"name":"Car","type":"related"},{"name":"Caronte","type":"exact"}],"termid":"MONDO:0011404","xrefs":{"Monarch":{"xref_id":"0011404"}}}


id: FYPO:0007578
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the actin cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal protein localization to actin cytoskeleton","termid":"FYPO:0007577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization to actin cytoskeleton during vegetative growth","synonyms":[{"name":"abnormal protein localisation to actin cytoskeleton during vegetative growth","type":"exact"},{"name":"abnormal protein localization to actin cytoskeleton during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007578"}


id: GO:0036192
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxyindolin-2-one + O2 + reduced [NADPH--hemoprotein reductase] = 2-hydroxy-2H-1,4-benzoxazin-3(4H)-one + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:31927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"3-hydroxyindolin-2-one monooxygenase activity","secondary_identifiers":["EC:1.14.14.109","KEGG_REACTION:R07422"],"synonyms":[{"name":"3-hydroxyindolin-2-one,NAD(P)H:oxygen oxidoreductase (2-hydroxy-2H-1,4-benzoxazin-3(4H)-one-forming)","type":"related"}],"termid":"GO:0036192"}


id: GO:0035624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a receptor is activated by another receptor. Receptor transactivation can occur through different mechanisms and includes cross-talk between signaling pathways where one receptor activates a receptor for a different ligand, and also activation of subunits within a receptor oligomer.","definition_xrefs":["GOC:bf","PMID:16870826","PMID:21063387","GOC:al","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete receptor transactivation (obsolete GO:0035624)","termid":"GO:0035624"}


id: PBO:0062797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ORMDL sphingolipid biosynthesis regulator 2","termid":"PBO:0062797"}


id: PBO:0070919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 27","termid":"PBO:0070919"}


id: MONDO:0017252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pulmonary airway malformation","termid":"MONDO:0016580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital pulmonary airway malformation type 4","secondary_identifiers":["icd11.foundation:1737719514","GARD:21097","MEDGEN:1777484","UMLS:C5437760","Orphanet:280854"],"synonyms":[{"name":"CPAM type 4","type":"exact"},{"name":"congenital cystic adenomatoid malformation of the lung type 4","type":"exact"},{"name":"congenital cystic adenomatous malformation of the lung type 4","type":"exact"}],"termid":"MONDO:0017252","xrefs":{"Monarch":{"xref_id":"0017252"}}}


id: FYPO:0005483
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of an inositol phosphate phosphatase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phosphatase activity","termid":"FYPO:0004415"},{"relation_name":"is_a","term_name":"abnormal inositol phosphate phosphatase activity","termid":"FYPO:0005482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"increased inositol phosphate phosphatase activity","termid":"FYPO:0005483"}


id: MONDO:0013124
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pelvic organ prolapse","termid":"MONDO:0000082"},{"relation_name":"excluded_subClassOf","term_name":"peeling skin syndrome","termid":"MONDO:0019347"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pelvic organ prolapse, susceptibility to, 2","secondary_identifiers":["UMLS:C2751314","OMIM:613088","MEDGEN:416523"],"synonyms":[{"name":"Pvop2","type":"related"},{"name":"pelvic organ prolapse, susceptibility to, 2","type":"exact"},{"name":"pelvic organ prolapse, susceptibility to, type 2","type":"exact"}],"termid":"MONDO:0013124","xrefs":{"Monarch":{"xref_id":"0013124"}}}


id: GO:0071610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-C motif) ligand 1 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 1 production","synonyms":[{"name":"CCL1 production","type":"exact"},{"name":"T cell activation 3 production","type":"exact"},{"name":"TCA-3 production","type":"exact"}],"termid":"GO:0071610"}


id: GO:2000596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of optic nerve formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of optic nerve formation","termid":"GO:2000595"},{"relation_name":"negatively_regulates","term_name":"optic nerve formation","termid":"GO:0021634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of optic nerve formation","synonyms":[{"name":"negative regulation of CN II biosynthesis","type":"related"},{"name":"negative regulation of CN II formation","type":"related"}],"termid":"GO:2000596"}


id: GO:0015026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an extracellular or intracellular messenger, and in cooperation with a nearby primary receptor, initiating a change in cell activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"coreceptor activity","secondary_identifiers":["GO:0015027","GO:0015028"],"synonyms":[{"name":"coreceptor, insoluble ligand activity","type":"related"},{"name":"coreceptor, soluble ligand activity","type":"related"}],"termid":"GO:0015026"}


id: GO:0048741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the skeletal muscle fiber over time, from its formation to the mature structure. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast.","definition_xrefs":["GOC:dph","GOC:lm","GOC:ef","GOC:jid","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myotube cell development","termid":"GO:0014904"},{"relation_name":"part_of","term_name":"skeletal muscle tissue development","termid":"GO:0007519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle fiber development","synonyms":[{"name":"skeletal muscle fibre development","type":"exact"},{"name":"skeletal myofiber development","type":"exact"},{"name":"skeletal myofibre development","type":"exact"}],"termid":"GO:0048741"}


id: GO:0106014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the inflammatory response to wounding.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","GOC:rph","PMID:26022821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inflammatory response","termid":"GO:0050727"},{"relation_name":"is_a","term_name":"regulation of response to wounding","termid":"GO:1903034"},{"relation_name":"regulates","term_name":"inflammatory response to wounding","termid":"GO:0090594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of inflammatory response to wounding","termid":"GO:0106014"}


id: MONDO:0001384
data:
  {"annotated_genes":["SJAG_03233","SJAG_04553"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032941"},{"annotations":[87831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012154"}]},"cv_name":"mondo","definition":"The condition in which the individual does not see far distances clearly.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"refractive error","termid":"MONDO:0004892"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03233":null,"SJAG_04553":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:11830","OMIMPS:160700","HP:0000545","MESH:D009216","SCTID:57190000","ICD10CM:H52.1","icd11.foundation:1666440799","ICD9:367.1","MEDGEN:44558","UMLS:C0027092"],"synonyms":[{"name":"myopia","type":"exact"},{"name":"myopia (disease)","type":"exact"},{"name":"near vision","type":"exact"},{"name":"near-sightedness","type":"exact"},{"name":"short-sightedness","type":"exact"}],"termid":"MONDO:0001384","terms_by_termid":{"MONDO:0012154":null,"MONDO:0032941":null},"xrefs":{"Monarch":{"xref_id":"0001384"}}}


id: PBO:0074152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member E1 pseudogene 1","termid":"PBO:0074152"}


id: MONDO:0015106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare urogenital disease (obsolete MONDO:0015106)","secondary_identifiers":["Orphanet:101433"],"termid":"MONDO:0015106","xrefs":{"Monarch":{"xref_id":"0015106"}}}


id: PBO:0084811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; mCherry fusion protein localizes to the vacuole","termid":"PBO:0084811"}


id: GO:0003024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events by which a decrease in diameter of an artery is detected and converted to a molecular signal.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"baroreceptor detection of arterial stretch","termid":"GO:0001981"},{"relation_name":"part_of","term_name":"baroreceptor response to decreased systemic arterial blood pressure","termid":"GO:0001982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"baroreceptor detection of decreased arterial stretch","termid":"GO:0003024"}


id: GO:0007608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of chemical stimulus","termid":"GO:0007606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of smell","secondary_identifiers":["Wikipedia:Olfaction"],"synonyms":[{"name":"olfaction","type":"exact"},{"name":"scent perception","type":"exact"},{"name":"sense of smell","type":"exact"},{"name":"smell perception","type":"exact"}],"termid":"GO:0007608"}


id: MONDO:0003077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinoblastoma restricted to local involvement.","definition_xrefs":["NCIT:C7846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoblastoma","termid":"MONDO:0008380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"intraocular retinoblastoma","secondary_identifiers":["MEDGEN:78874","DOID:4653","UMLS:C0278717"],"synonyms":[{"name":"intraocular retinoblastoma","type":"exact"}],"termid":"MONDO:0003077","xrefs":{"Monarch":{"xref_id":"0003077"}}}


id: MONDO:0017738
data:
  {"annotated_genes":["SJAG_03824","SJAG_02131"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87010,87011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009290"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease","termid":"MONDO:0002561"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02131":null,"SJAG_03824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"lysosomal glycogen storage disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1842699","GARD:21333","UMLS:C5681077","ICD10CM:E74.0","Orphanet:309337"],"termid":"MONDO:0017738","terms_by_termid":{"MONDO:0009290":null},"xrefs":{"Monarch":{"xref_id":"0017738"}}}


id: PR:P08094
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpp201 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P08094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein P2-alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.06","synonyms":[{"name":"A2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"L12EI (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"L40C (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpp201","type":"exact"}],"termid":"PR:P08094"}


id: PBO:0034607
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_chromatin_at_rDNA_replication_fork_barrier","termid":"PBO:0034607"}


id: MOD:00545
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant with MOD:00927. Remap to MOD:00927.","definition_xrefs":["PubMed:14670044"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00545 deuterated dimethyl labeling (D) (obsolete MOD:00545)","termid":"MOD:00545"}


id: PATO:0000350
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000350 electrolyte composition value (obsolete PATO:0000350)","termid":"PATO:0000350"}


id: GO:0044495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process by which one organism modulates the force with which blood travels through the circulatory system of another organism.","definition_xrefs":["GOC:jl","GOC:fj","PMID:19837656"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of blood pressure in another organism (obsolete GO:0044495)","synonyms":[{"name":"modulation of blood pressure in other organism","type":"exact"},{"name":"regulation of blood pressure in other organism","type":"exact"}],"termid":"GO:0044495"}


id: PBO:0072218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S19 pseudogene 1","termid":"PBO:0072218"}


id: GO:0050130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-methyl-2-oxoglutaramate + H2O = 2-oxoglutarate + methylammonium.","definition_xrefs":["EC:3.5.1.36","RHEA:24108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"N-methyl-2-oxoglutaramate hydrolase activity","secondary_identifiers":["KEGG_REACTION:R01587","MetaCyc:N-METHYL-2-OXOGLUTARAMATE-HYDROLASE-RXN"],"synonyms":[{"name":"5-hydroxy-N-methylpyroglutamate synthase activity","type":"related"},{"name":"N-methyl-2-oxoglutaramate methylamidohydrolase activity","type":"related"}],"termid":"GO:0050130"}


id: PBO:0090551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S12 Mrps12b","termid":"PBO:0090551"}


id: PBO:0036556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial proton-transporting ATP synthase inhibitor Inh1 (predicted)","termid":"PBO:0036556"}


id: MONDO:0010148
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mounier-Kuhn syndrome, also known as idiopathic tracheobronchomegaly, is a congenital disorder characterized by marked dilatation of the trachea and proximal bronchi that leads to impaired airway secretion clearance and recurrent lower respiratory tract infections.","definition_xrefs":["Orphanet:3347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mounier-Kuhn syndrome","secondary_identifiers":["MEDGEN:11871","MESH:D014137","NCIT:C85196","OMIM:275300","GARD:3793","MedDRA:10044316","SCTID:57451009","UMLS:C0040587","ICD9:748.3"],"synonyms":[{"name":"Mounier Kuhn syndrome","type":"related"},{"name":"Mounier-Kuhn syndrome","type":"exact"},{"name":"Mounier-Kühn syndrome","type":"related"},{"name":"congenital tracheobronchomegaly","type":"exact"},{"name":"idiopathic tracheobronchomegaly","type":"exact"},{"name":"tracheobronchomegaly","type":"exact"}],"termid":"MONDO:0010148","xrefs":{"Monarch":{"xref_id":"0010148"}}}


id: PR:O14279
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rrp14 gene.","definition_xrefs":["UniProtKB:O14279","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA-processing protein 14-N (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8C9.10c","synonyms":[{"name":"Spom972h-rrp14","type":"exact"},{"name":"ribosome biogenesis protein rrp14-N (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14279"}


id: GO:0045752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the Tl signaling pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Toll signaling pathway","termid":"GO:0008592"},{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"positively_regulates","term_name":"Toll signaling pathway","termid":"GO:0008063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of Toll signaling pathway","synonyms":[{"name":"activation of Toll signaling pathway","type":"narrow"},{"name":"positive regulation of Tl signaling pathway","type":"exact"},{"name":"positive regulation of Tl signalling pathway","type":"exact"},{"name":"stimulation of Toll signaling pathway","type":"narrow"},{"name":"up regulation of Toll signaling pathway","type":"exact"},{"name":"up-regulation of Toll signaling pathway","type":"exact"},{"name":"upregulation of Toll signaling pathway","type":"exact"}],"termid":"GO:0045752"}


id: FYPO:0005605
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which sites at which the protein Ssb1 accumulates remain present for longer than normal during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah","PMID:27098497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased duration of Ssb1 focus presence during cellular response to ionizing radiation","synonyms":[{"name":"delayed peak level of Ssb1 foci","type":"related"},{"name":"increased duration of RPA focus presence during cellular response to ionizing radiation","type":"exact"},{"name":"increased duration of Rad11 focus presence during cellular response to ionizing radiation","type":"exact"},{"name":"increased duration of Rpa1 focus presence during cellular response to ionizing radiation","type":"exact"},{"name":"increased duration of Ssb1 focus presence during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"increased duration of Ssb1 focus presence during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"increased persistence of Ssb1 foci during cellular response to ionizing radiation","type":"exact"},{"name":"prolonged Ssb1 focus presence during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0005605"}


id: GO:1902176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of an oxidative stress-induced intrinsic apoptotic signaling pathway.","definition_xrefs":["PMID:11672522","GOC:BHF","GOC:mtg_apoptosis","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidative stress-induced intrinsic apoptotic signaling pathway","termid":"GO:1902175"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001243"},{"relation_name":"negatively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to oxidative stress","termid":"GO:0008631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway","synonyms":[{"name":"down regulation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"down-regulation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"downregulation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"inhibition of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"narrow"},{"name":"negative regulation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"}],"termid":"GO:1902176"}


id: MONDO:0020251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare strabismus and restriction syndrome (obsolete MONDO:0020251)","secondary_identifiers":["Orphanet:98681"],"termid":"MONDO:0020251","xrefs":{"Monarch":{"xref_id":"0020251"}}}


id: GO:1905926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of invadopodium assembly.","definition_xrefs":["GOC:TermGenie","PMID:15684033","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of invadopodium assembly (obsolete GO:1905926)","synonyms":[{"name":"activation of invadopodium assembly","type":"narrow"},{"name":"activation of invadopodium formation","type":"narrow"},{"name":"positive regulation of invadopodium formation","type":"exact"},{"name":"up regulation of invadopodium assembly","type":"exact"},{"name":"up regulation of invadopodium formation","type":"exact"},{"name":"up-regulation of invadopodium assembly","type":"exact"},{"name":"up-regulation of invadopodium formation","type":"exact"},{"name":"upregulation of invadopodium assembly","type":"exact"},{"name":"upregulation of invadopodium formation","type":"exact"}],"termid":"GO:1905926"}


id: PBO:0024850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family RNA-binding protein Puf2","termid":"PBO:0024850"}


id: MONDO:0859356
data:
  {"annotated_genes":["SJAG_03865"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87340],"is_not":false,"summary":null,"term":"MONDO:0859356"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type II","termid":"MONDO:0005501"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"congenital disorder of glycosylation, type IIy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1824067","UMLS:C5774294","OMIM:620200"],"termid":"MONDO:0859356","terms_by_termid":{"MONDO:0859356":null},"xrefs":{"Monarch":{"xref_id":"0859356"}}}


id: GO:0080052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a histidine stimulus.","definition_xrefs":["PMID:15889294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to histidine","termid":"GO:0080052"}


id: MONDO:0005507
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm that affects the gums.","definition_xrefs":["NCIT:C9317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone cancer","termid":"MONDO:0002129"},{"relation_name":"is_a","term_name":"oral cavity cancer","termid":"MONDO:0005515"},{"relation_name":"is_a","term_name":"head and neck cancer","termid":"MONDO:0005627"},{"relation_name":"is_a","term_name":"gingival neoplasm","termid":"MONDO:0021086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"gingival cancer","secondary_identifiers":["ICD9:143.9","UMLS:C0153364","EFO:0005557","MEDGEN:57549","ICD9:143","ICD9:143.8","ICD10CM:C03","MedDRA:10067807","SCTID:363382005","DOID:8602"],"synonyms":[{"name":"cancer of gingiva","type":"exact"},{"name":"gingiva cancer","type":"exact"},{"name":"gum cancer","type":"related"},{"name":"malignant gingiva neoplasm","type":"exact"},{"name":"malignant gingival neoplasm","type":"exact"},{"name":"malignant gingival tumor","type":"exact"},{"name":"malignant gingival tumour","type":"exact"},{"name":"malignant gum neoplasm","type":"exact"},{"name":"malignant gum tumor","type":"exact"},{"name":"malignant gum tumour","type":"exact"},{"name":"malignant neoplasm of gingiva","type":"exact"},{"name":"malignant neoplasm of gum","type":"exact"},{"name":"malignant neoplasm of other sites of gum","type":"exact"},{"name":"malignant neoplasm of the gingiva","type":"exact"},{"name":"malignant neoplasm of the gum","type":"exact"},{"name":"malignant tumor of gingiva","type":"exact"},{"name":"malignant tumor of gum","type":"exact"},{"name":"malignant tumor of the gingiva","type":"exact"},{"name":"malignant tumor of the gum","type":"exact"},{"name":"malignant tumour of gingiva","type":"exact"},{"name":"malignant tumour of gum","type":"exact"},{"name":"malignant tumour of the gingiva","type":"exact"},{"name":"malignant tumour of the gum","type":"exact"}],"termid":"MONDO:0005507","xrefs":{"Monarch":{"xref_id":"0005507"}}}


id: FYPO:0005201
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to heat stress is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic cell cycle regulation during cellular response to heat stress","synonyms":[{"name":"abnormal cell cycle regulation during cellular response to heat stress","type":"exact"},{"name":"abnormal cell cycle regulation during cellular response to heat stress during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to heat stress during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle regulation in response to heat stress","type":"exact"}],"termid":"FYPO:0005201"}


id: GO:0048910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an afferent axon in the anterior lateral line nerve over time from its formation to the mature structure. This process includes axonogenesis and pathfinding of the afferent axons in the anterior lateral line nerve.","definition_xrefs":["PMID:15018940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"afferent axon development in lateral line nerve","termid":"GO:0048893"},{"relation_name":"part_of","term_name":"anterior lateral line nerve development","termid":"GO:0048909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"afferent axon development in anterior lateral line nerve","termid":"GO:0048910"}


id: FYPO:0000923
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of isocitrate dehydrogenase (NAD+) activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal isocitrate dehydrogenase (NAD+) activity","termid":"FYPO:0000922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"increased isocitrate dehydrogenase (NAD+) activity","synonyms":[{"name":"increased NAD-IDH activity","type":"exact"}],"termid":"FYPO:0000923"}


id: GO:0005627
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A sac-like fruiting body (ascomycete Fungi); contains ascospores (typically eight in number).","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete ascus (obsolete GO:0005627)","synonyms":[{"name":"ascus","type":"exact"}],"termid":"GO:0005627"}


id: GO:1901117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cephamycin C.","definition_xrefs":["UniPathway:UPA00183","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-lactam antibiotic catabolic process","termid":"GO:0030655"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"cephamycin C metabolic process","termid":"GO:1901116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"cephamycin C catabolic process","synonyms":[{"name":"cephamycin C breakdown","type":"exact"},{"name":"cephamycin C catabolism","type":"exact"},{"name":"cephamycin C degradation","type":"exact"}],"termid":"GO:1901117"}


id: PBO:0091197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly","termid":"PBO:0091197"}


id: GO:1900192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of single-species biofilm formation.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of single-species biofilm formation","termid":"GO:1900190"},{"relation_name":"positively_regulates","term_name":"single-species biofilm formation","termid":"GO:0044010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of single-species biofilm formation","synonyms":[{"name":"activation of single-species biofilm formation","type":"narrow"},{"name":"up regulation of single-species biofilm formation","type":"exact"},{"name":"up-regulation of single-species biofilm formation","type":"exact"},{"name":"upregulation of single-species biofilm formation","type":"exact"}],"termid":"GO:1900192"}


id: PBO:0072051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 21","termid":"PBO:0072051"}


id: RO:0002233
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p has input c iff: p is a process, c is a material entity, c is a participant in p, c is present at the start of p, and the state of c is modified during p.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_input","termid":"RO:0002233"}


id: GO:0031969
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Either of the lipid bilayers that surround a chloroplast and form the chloroplast envelope.","definition_xrefs":["GOC:mah","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane","termid":"GO:0042170"},{"relation_name":"part_of","term_name":"chloroplast envelope","termid":"GO:0009941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chloroplast membrane","secondary_identifiers":["Wikipedia:Chloroplast_membrane"],"termid":"GO:0031969"}


id: FYPO:0007397
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of heme into the cell is abolished.","definition_xrefs":["PomBase:mah","GO:0140420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal transport","termid":"FYPO:0001720"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abolished heme import","synonyms":[{"name":"abolished haem import","type":"exact"},{"name":"abolished heme import during mitotic cell cycle","type":"related"},{"name":"abolished heme import during vegetative growth","type":"exact"},{"name":"abolished heme import into cell","type":"exact"},{"name":"heme import abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0007397"}


id: PATO:0002485
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's possessing two sides that are at the same continuous distance relative to each other.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parallel-sided","termid":"PATO:0002485"}


id: PR:O94314
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC215.10 gene.","definition_xrefs":["UniProtKB:O94314","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized hydrolase C215.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.10","synonyms":[{"name":"Spom972h-SPBC215.10","type":"exact"}],"termid":"PR:O94314"}


id: PBO:0025427
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperlysinemia","termid":"PBO:0025427"}


id: PBO:0054500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1900","termid":"PBO:0054500"}


id: MONDO:0032750
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"Sheldon-hall syndrome","termid":"MONDO:0011128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"arthrogryposis, distal, type 2B2","secondary_identifiers":["GARD:16351","MEDGEN:1674500","UMLS:C5193097","DOID:0111601","OMIM:618435"],"synonyms":[{"name":"DA2B2","type":"exact"},{"name":"arthrogryposis, distal, type 2B2","type":"exact"}],"termid":"MONDO:0032750","xrefs":{"Monarch":{"xref_id":"0032750"}}}


id: GO:1905721
data:
  {"annotated_genes":["SJAG_02695"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[98784],"is_not":false,"summary":null,"term":"GO:1905721"}]},"cv_name":"cellular_component","definition":"Any microtubule end that is part of a mitotic spindle astral microtubule.","definition_xrefs":["GO_REF:0000064","PMID:11007487","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule end","termid":"GO:1990752"},{"relation_name":"part_of","term_name":"mitotic spindle astral microtubule","termid":"GO:0061673"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02695":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0072686"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0072686","GO:0015630","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"mitotic spindle astral microtubule end","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitotic spindle astral microtubule tip","type":"exact"}],"termid":"GO:1905721","terms_by_termid":{"GO:1905721":null}}


id: MONDO:0008530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teeth, odd shapes of","secondary_identifiers":["UMLS:C1861274","MESH:C566076","OMIM:187000","MEDGEN:396097"],"synonyms":[{"name":"Lobodontia","type":"related"},{"name":"conical teeth, multiple","type":"related"},{"name":"teeth, odd shapes of","type":"exact"}],"termid":"MONDO:0008530","xrefs":{"Monarch":{"xref_id":"0008530"}}}


id: FYPO:0008219
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed during the G2/M phase of the mitotic cell cycle in which acetylation of lysine at position 56 of histone H3 in regions of the genome that are actively transcribed occurs to a greater extent than normal.","definition_xrefs":["PMID:27268234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K56 acetylation in transcribed regions during vegetative growth","termid":"FYPO:0002370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001320","FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H3-K56 acetylation in transcribed regions during mitotic G2/M phase","termid":"FYPO:0008219"}


id: MONDO:1012453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"selective ADP deficiency, non-human animal","termid":"MONDO:1011703"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selective ADP deficiency, dog","secondary_identifiers":["OMIA:001792-9615"],"termid":"MONDO:1012453","xrefs":{"Monarch":{"xref_id":"1012453"}}}


id: FYPO:0000060
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121346],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains a single nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"},{"relation_name":"is_a","term_name":"mononucleate","termid":"FYPO:0002731"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"mononucleate vegetative cell","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"mononucleate during vegetative growth","type":"exact"},{"name":"mononucleate vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000060","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: PBO:0042308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD24 molecule pseudogene 2","termid":"PBO:0042308"}


id: SO:0000866
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A frameshift caused by deleting one base.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frameshift","termid":"SO:0000865"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minus_1_frameshift","synonyms":[{"name":"minus 1 frameshift","type":"exact"}],"termid":"SO:0000866"}


id: PBO:0002021
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.289","termid":"PBO:0002021"}


id: PBO:0018123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial guanine nucleotide transmembrane transporter Ggc1 (predicted)","termid":"PBO:0018123"}


id: PBO:0064845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP1R13B divergent transcript","termid":"PBO:0064845"}


id: GO:0034313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a diol, any alcohol containing two hydroxyl groups attached to saturated carbon atoms.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diol metabolic process","termid":"GO:0034311"},{"relation_name":"is_a","term_name":"polyol catabolic process","termid":"GO:0046174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"diol catabolic process","synonyms":[{"name":"dihydric alcohol catabolic process","type":"exact"},{"name":"diol breakdown","type":"exact"},{"name":"diol catabolism","type":"exact"},{"name":"diol degradation","type":"exact"}],"termid":"GO:0034313"}


id: FYPO:0001015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-4-phosphate measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered cellular phosphoinositide level","termid":"FYPO:0001290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"altered cellular phosphatidylinositol-4-phosphate level","synonyms":[{"name":"abnormal cellular phosphatidylinositol-4-phosphate level","type":"exact"},{"name":"altered PI-4-P accumulation","type":"related"},{"name":"altered cellular PI(4)P level","type":"exact"},{"name":"altered cellular PI-4-P level","type":"exact"},{"name":"altered cellular phosphatidylinositol-4-phosphate level during mitotic cell cycle","type":"related"},{"name":"altered cellular phosphatidylinositol-4-phosphate level during vegetative growth","type":"exact"}],"termid":"FYPO:0001015"}


id: GO:0021627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the olfactory nerve is generated and organized. The olfactory nerve is a collection of sensory nerve rootlets that extend down from the olfactory bulb to the olfactory mucosa of the upper parts of the nasal cavity. This nerve conducts odor information to the brainstem.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:dgh","ISBN:0838580343","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"olfactory nerve development","termid":"GO:0021553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory nerve morphogenesis","synonyms":[{"name":"CN I morphogenesis","type":"related"}],"termid":"GO:0021627"}


id: MONDO:0011925
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital muscular dystrophy type 1A (MCD1A) belongs to a group of neuromuscular disorders with onset at birth or infancy characterized by hypotonia, muscle weakness and muscle wasting.","definition_xrefs":["Orphanet:258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital muscular dystrophy","termid":"MONDO:0019950"},{"relation_name":"is_a","term_name":"LAMA2-related muscular dystrophy","termid":"MONDO:0100228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"congenital merosin-deficient muscular dystrophy 1A","secondary_identifiers":["SCTID:111503008","MEDGEN:224728","UMLS:C1263858","NANDO:2200861","GARD:3843","OMIM:607855","DOID:0110636","NCIT:C118783"],"synonyms":[{"name":"CMD1A","type":"exact"},{"name":"LAMA2 congenital muscular dystrophy","type":"exact"},{"name":"LAMA2-related muscular dystrophy","type":"related"},{"name":"MDC1A","type":"exact"},{"name":"congenital merosin-deficient muscular dystrophy type 1A","type":"exact"},{"name":"congenital muscular dystrophy caused by mutation in LAMA2","type":"exact"},{"name":"congenital muscular dystrophy due to laminin alpha2 deficiency","type":"exact"},{"name":"congenital muscular dystrophy type 1A","type":"related"},{"name":"laminin alpha-2 deficiency","type":"related"},{"name":"merosin-deficient congenital muscular dystrophy","type":"related"},{"name":"merosin-deficient congenital muscular dystrophy type 1A","type":"exact"},{"name":"merosin-negative congenital muscular dystrophy","type":"exact"},{"name":"muscular dystrophy, congenital merosin-deficient","type":"related"},{"name":"muscular dystrophy, congenital merosin-deficient, 1A","type":"related"},{"name":"muscular dystrophy, congenital merosin-deficient, type 1A","type":"exact"},{"name":"muscular dystrophy, congenital, due to partial LAMA2 deficiency","type":"related"},{"name":"muscular dystrophy, congenital, merosin deficient or partially deficient","type":"exact"},{"name":"muscular dystrophy, congenital, merosin-deficient","type":"related"}],"termid":"MONDO:0011925","xrefs":{"Monarch":{"xref_id":"0011925"}}}


id: GO:0009452
data:
  {"annotated_genes":["SJAG_01724","SJAG_04034","SJAG_04488","SJAG_01713"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70222,77231,74085,109527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006370"},{"annotations":[60457],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0106005"}]},"cv_name":"biological_process","definition":"The sequence of enzymatic reactions by which the RNA 5' cap structure, an inverted 7-methylguanosine linked via a 5'-5' triphosphate bridge (m7G(5')ppp(5')X) to the first transcribed residue, is added to a nascent transcript. Additional methylation can occur on the ribose sugars of the first and second nucleotides adjacent to the m7G nRNA cap. These methylations are often referred to as N6,2'-O-dimethyladenosine (m6,2A) and N6,2'-O-dimethylguanosine (m6,2G), respectively.","definition_xrefs":["GOC:vw","PMID:9266685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA capping","termid":"GO:0036260"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01713":null,"SJAG_01724":null,"SJAG_04034":null,"SJAG_04488":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"7-methylguanosine RNA capping","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"RNA capping","type":"broad"},{"name":"m(7)G RNA capping","type":"exact"}],"termid":"GO:0009452","terms_by_termid":{"GO:0006370":null,"GO:0106005":null}}


id: GO:0046741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transport of a virus between tissues in a multicellular organism.","definition_xrefs":["GOC:jl","ISBN:0781718325","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport of virus in multicellular host","termid":"GO:0046739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transport of virus in host, tissue to tissue","synonyms":[{"name":"spread of virus in host, tissue to tissue","type":"related"},{"name":"spread of virus within host, tissue to tissue","type":"exact"},{"name":"tissue to tissue spread of virus within host","type":"exact"},{"name":"viral spread within host, tissue to tissue","type":"exact"}],"termid":"GO:0046741"}


id: PBO:0084843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; has similarity to E. coli L4 ribosomal protein and human mitoribosomal MRP-L4 protein; essential for viability, unlike most other mitoribosomal proteins","termid":"PBO:0084843"}


id: MONDO:0017600
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hairy Cell Leukemia variant (HCL-V) is defined as a rare and indolent form of small, mature, B-cell leukemia characterized by splenomegaly, an elevated white blood cell (WBC) count and hyper-cellular bone marrow. HCL-V is more aggressive and resistant to therapy than classical HCL (HCL-C).","definition_xrefs":["Orphanet:300878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hairy cell leukemia","termid":"MONDO:0018935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"hairy cell leukemia variant","secondary_identifiers":["SCTID:277568007","MEDGEN:91160","ICDO:9591/3","GARD:21249","MedDRA:10019054","DOID:713","NCIT:C7401","UMLS:C0349633"],"synonyms":[{"name":"HCL-V","type":"exact"},{"name":"HCL-v","type":"exact"},{"name":"hairy cell leukemia variant","type":"exact"},{"name":"leukemic reticuloendotheliosis variant","type":"exact"},{"name":"prolymphocytic variant of HCL","type":"exact"},{"name":"prolymphocytic variant of hairy cell leukaemia","type":"exact"},{"name":"prolymphocytic variant of hairy cell leukemia","type":"exact"}],"termid":"MONDO:0017600","xrefs":{"Monarch":{"xref_id":"0017600"}}}


id: PBO:0038401
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-helper_property_(not_for_use_in_curation)","termid":"PBO:0038401"}


id: MONDO:0021089
data:
  {"annotated_genes":["SJAG_01671","SJAG_00260","SJAG_01895"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011121"},{"annotations":[87415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007273"},{"annotations":[87625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013602"}]},"cv_name":"mondo","definition":"Malignant growth of cells in the peripheral nervous system (PNS)or Autonomic Nervous System (ANS), without specification as to location","definition_xrefs":["NCIT:C4961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral nervous system neoplasm","termid":"MONDO:0001406"},{"relation_name":"is_a","term_name":"nervous system cancer","termid":"MONDO:0005872"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01671":null,"SJAG_01895":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"peripheral nervous system cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:155556","ICD9:171.9","SCTID:254986007","UMLS:C0751428"],"synonyms":[{"name":"cancer of peripheral nervous system","type":"exact"},{"name":"malignant PNS neoplasm","type":"exact"},{"name":"malignant PNS tumor","type":"exact"},{"name":"malignant PNS tumour","type":"exact"},{"name":"malignant neoplasm of PNS","type":"exact"},{"name":"malignant neoplasm of peripheral nerve","type":"exact"},{"name":"malignant neoplasm of peripheral nervous system","type":"exact"},{"name":"malignant neoplasm of the PNS","type":"exact"},{"name":"malignant neoplasm of the peripheral nerve","type":"exact"},{"name":"malignant neoplasm of the peripheral nervous system","type":"exact"},{"name":"malignant neoplasms, peripheral nerve","type":"exact"},{"name":"malignant peripheral nerve neoplasm","type":"exact"},{"name":"malignant peripheral nerve tumor","type":"exact"},{"name":"malignant peripheral nerve tumour","type":"exact"},{"name":"malignant peripheral nervous system neoplasm","type":"exact"},{"name":"malignant peripheral nervous system tumor","type":"exact"},{"name":"malignant peripheral nervous system tumour","type":"exact"},{"name":"malignant tumor of PNS","type":"exact"},{"name":"malignant tumor of peripheral nerve","type":"exact"},{"name":"malignant tumor of peripheral nervous system","type":"exact"},{"name":"malignant tumor of the PNS","type":"exact"},{"name":"malignant tumor of the peripheral nerve","type":"exact"},{"name":"malignant tumor of the peripheral nervous system","type":"exact"},{"name":"malignant tumour of PNS","type":"exact"},{"name":"malignant tumour of peripheral nerve","type":"exact"},{"name":"malignant tumour of peripheral nervous system","type":"exact"},{"name":"malignant tumour of the PNS","type":"exact"},{"name":"malignant tumour of the peripheral nerve","type":"exact"},{"name":"malignant tumour of the peripheral nervous system","type":"exact"},{"name":"peripheral nervous system cancer","type":"exact"},{"name":"peripheral nervous system neoplasms, malignant","type":"exact"}],"termid":"MONDO:0021089","terms_by_termid":{"MONDO:0007273":null,"MONDO:0011121":null,"MONDO:0013602":null},"xrefs":{"Monarch":{"xref_id":"0021089"}}}


id: SO:0000752
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that is involved in the regulation of transcription of a group of regulated genes.","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000752 gene_group_regulatory_region (obsolete SO:0000752)","synonyms":[{"name":"gene group regulatory region","type":"exact"}],"termid":"SO:0000752"}


id: PBO:0064707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 43","termid":"PBO:0064707"}


id: GO:1904393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle acetylcholine-gated channel clustering.","definition_xrefs":["GO_REF:0000058","PMID:7722643","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor clustering","termid":"GO:1903909"},{"relation_name":"regulates","term_name":"skeletal muscle acetylcholine-gated channel clustering","termid":"GO:0071340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle acetylcholine-gated channel clustering","synonyms":[{"name":"regulation of skeletal muscle AChR clustering","type":"exact"},{"name":"regulation of skeletal muscle nicotinic acetylcholine receptor clustering","type":"exact"}],"termid":"GO:1904393"}


id: GO:0003939
data:
  {"annotated_genes":["SJAG_00237"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74358],"is_not":false,"summary":null,"term":"GO:0003939"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-iditol + NAD+ = L-sorbose + NADH + H+. Acts on a number of sugar alcohols, including (but not limited to) L-iditol, D-glucitol, D-xylitol, and D-galactitol.","definition_xrefs":["PMID:13373783","EC:1.1.1.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NAD+) activity","termid":"GO:0004022"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"L-iditol 2-dehydrogenase (NAD+) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:L-IDITOL-2-DEHYDROGENASE-RXN","Reactome:R-HSA-5652195"],"synonyms":[{"name":"L-iditol (sorbitol) dehydrogenase activity","type":"related"},{"name":"L-iditol:NAD oxidoreductase activity","type":"related"},{"name":"L-iditol:NAD+ 5-oxidoreductase activity","type":"related"},{"name":"NAD+-dependent sorbitol dehydrogenase activity","type":"related"},{"name":"NAD-dependent sorbitol dehydrogenase activity","type":"related"},{"name":"NAD-sorbitol dehydrogenase","type":"related"},{"name":"glucitol dehydrogenase activity","type":"related"},{"name":"polyol dehydrogenase activity","type":"broad"},{"name":"sorbitol dehydrogenase activity","type":"related"}],"termid":"GO:0003939","terms_by_termid":{"GO:0003939":null}}


id: PBO:0119983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMPD2 antisense RNA 1","termid":"PBO:0119983"}


id: GO:0035439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranylgeranyl diphosphate = halima-5(6),13-dien-15-yl diphosphate.","definition_xrefs":["EC:5.5.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0009975","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"halimadienyl-diphosphate synthase activity","secondary_identifiers":["RHEA:25621"],"synonyms":[{"name":"halima-5(6),13-dien-15-yl-diphosphate lyase (cyclizing)","type":"related"},{"name":"halimadienyl diphosphate synthase activity","type":"related"}],"termid":"GO:0035439"}


id: PBO:0066683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein, LIM domain interacting pseudogene 1","termid":"PBO:0066683"}


id: PBO:0068457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 33, pseudogene","termid":"PBO:0068457"}


id: MONDO:0010485
data:
  {"annotated_genes":["SJAG_03603"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87039],"is_not":false,"summary":null,"term":"MONDO:0010485"}]},"cv_name":"mondo","definition":"X-linked colobomatous microphthalmia-microcephaly-intellectual disability-short stature syndrome is a rare syndromic microphthalmia disorder characterized by microphthalmia with coloboma (which may involve the iris, cilary body, choroid, retina and/or optic nerve), microcephaly, short stature and intellectual disability. Other eye abnormalities such as pendular nystagmus, esotropia and ptosis may also be present. Additional associated abnormalities include kyphoscoliosis, anteverted pinnae with minimal convolutions, diastema of the incisors and congenital pes varus.","definition_xrefs":["Orphanet:431140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"syndromic microphthalmia","termid":"MONDO:0016073"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03603":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"X-linked colobomatous microphthalmia-microcephaly-intellectual disability-short stature syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:813072","UMLS:C3806742","OMIM:300915","GARD:17709","DOID:0111811"],"synonyms":[{"name":"MCOPS13","type":"related"},{"name":"Maine microphthalmos","type":"related"},{"name":"X-linked colobomatous microphthalmia-microcephaly-short stature-psychomotor retardation syndrome","type":"exact"},{"name":"colobomatous microphthalmia with microcephaly, short stature, and psychomotor retardation","type":"related"},{"name":"microphthalmia, syndromic 13","type":"related"},{"name":"microphthalmia, syndromic type 13","type":"exact"}],"termid":"MONDO:0010485","terms_by_termid":{"MONDO:0010485":null},"xrefs":{"Monarch":{"xref_id":"0010485"}}}


id: PBO:0114662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER oxidoreductase Pbr1, implicated in lipid metabolism, or protein glycosylation","termid":"PBO:0114662"}


id: GO:0000245
data:
  {"annotated_genes":["SJAG_02279","SJAG_00474","SJAG_04230","SJAG_01015","SJAG_00322","SJAG_00498","SJAG_00147","SJAG_02558","SJAG_01008","SJAG_02185","SJAG_01870","SJAG_00225","SJAG_01654","SJAG_03983","SJAG_00911","SJAG_03214","SJAG_05009","SJAG_01440","SJAG_01301","SJAG_04214","SJAG_01214","SJAG_00058","SJAG_05231","SJAG_03469","SJAG_02843","SJAG_03995","SJAG_02304","SJAG_02573","SJAG_04538","SJAG_04911","SJAG_00313","SJAG_02058","SJAG_00249","SJAG_04163"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73794,73945,75642,77548,77877,80670,95187,103560,107316],"is_not":false,"summary":null,"term":"GO:0000245"},{"annotations":[119690],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000354"},{"annotations":[103064,74879],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000389"},{"annotations":[81147,95813,96744,107706,99647,114222,104531,115133,117105,97420,104369,112491,97000,111914,93381,112477],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000395"},{"annotations":[120598],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000348"},{"annotations":[79037,75999],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006376"},{"annotations":[108598,115711,114305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903241"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a spliceosomal complex, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions.","definition_xrefs":["PMID:9476892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"mRNA splicing, via spliceosome","termid":"GO:0000398"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00147":null,"SJAG_00225":null,"SJAG_00249":null,"SJAG_00313":null,"SJAG_00322":null,"SJAG_00474":null,"SJAG_00498":null,"SJAG_00911":null,"SJAG_01008":null,"SJAG_01015":null,"SJAG_01214":null,"SJAG_01301":null,"SJAG_01440":null,"SJAG_01654":null,"SJAG_01870":null,"SJAG_02058":null,"SJAG_02185":null,"SJAG_02279":null,"SJAG_02304":null,"SJAG_02558":null,"SJAG_02573":null,"SJAG_02843":null,"SJAG_03214":null,"SJAG_03469":null,"SJAG_03983":null,"SJAG_03995":null,"SJAG_04163":null,"SJAG_04214":null,"SJAG_04230":null,"SJAG_04538":null,"SJAG_04911":null,"SJAG_05009":null,"SJAG_05231":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0016071","GO:0044085","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"spliceosomal complex assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"spliceosome assembly","type":"broad"}],"termid":"GO:0000245","terms_by_termid":{"GO:0000245":null,"GO:0000348":null,"GO:0000354":null,"GO:0000389":null,"GO:0000395":null,"GO:0006376":null,"GO:1903241":null}}


id: PBO:0046748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 3 like 4","termid":"PBO:0046748"}


id: GO:0018258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glycosylation of proteins via 04 atom of hydroxyproline to form O4-glycosyl-L-hydroxyproline; the most common form is arabinofuranosyl-4-proline.","definition_xrefs":["RESID:AA0212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein O-linked glycosylation","termid":"GO:0006493"},{"relation_name":"is_a","term_name":"peptidyl-proline modification","termid":"GO:0018208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein O-linked glycosylation via hydroxyproline","synonyms":[{"name":"protein amino acid O-linked glycosylation via hydroxyproline","type":"exact"}],"termid":"GO:0018258"}


id: PBO:0065394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit alpha 2","termid":"PBO:0065394"}


id: GO:0046857
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a nitrogenous group, excluding NH and NH2 groups, acts as a hydrogen or electron donor and reduces NAD or NADP.","definition_xrefs":["EC:1.7.1.-","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors","termid":"GO:0016661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor","termid":"GO:0046857"}


id: GO:0033481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of galacturonate, the anion of galacturonic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galacturonate metabolic process","termid":"GO:0019586"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"galacturonate biosynthetic process","synonyms":[{"name":"galacturonate anabolism","type":"exact"},{"name":"galacturonate biosynthesis","type":"exact"},{"name":"galacturonate formation","type":"exact"},{"name":"galacturonate synthesis","type":"exact"}],"termid":"GO:0033481"}


id: GO:0048895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a glial cell in a lateral line nerve.","definition_xrefs":["PMID:12062041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell differentiation","termid":"GO:0010001"},{"relation_name":"part_of","term_name":"lateral line nerve development","termid":"GO:0048892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral line nerve glial cell differentiation","termid":"GO:0048895"}


id: GO:0034859
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: benzothiazole + 1/2 O2 = 2-hydroxybenzothiazole.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete benzothiazole monooxygenase activity (obsolete GO:0034859)","termid":"GO:0034859"}


id: GO:1904843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitroglycerin stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:25626975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to nitroglycerin","termid":"GO:1904842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nitroglycerin","synonyms":[{"name":"cellular response to nitroglycerine","type":"exact"},{"name":"cellular response to nitroglycerol","type":"exact"},{"name":"cellular response to trinitroglycerin","type":"exact"},{"name":"cellular response to trinitroglycerol","type":"exact"}],"termid":"GO:1904843"}


id: PBO:0049222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor kinase 5","termid":"PBO:0049222"}


id: GO:0002486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex following intracellular transport via a TAP-independent ER pathway. The peptide is typically a fragment of a larger endogenous protein which has been degraded within the cell and becomes associated with the MHC class I molecule in the ER following transport from the cytosol via a TAP-independent pathway. Class I here refers to classical class I molecules.","definition_xrefs":["GOC:add","PMID:14647477","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway","termid":"GO:0002484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-independent","synonyms":[{"name":"TAP-independent antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway","type":"exact"},{"name":"TAP-independent endogenous peptide antigen processing and presentation via MHC class I via ER pathway","type":"exact"},{"name":"endogenous peptide antigen processing and presentation via MHC class I via ER pathway, TAP-independent","type":"exact"}],"termid":"GO:0002486"}


id: PBO:0043928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-reactive protein","termid":"PBO:0043928"}


id: PBO:0014611
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae SSD1","termid":"PBO:0014611"}


id: PBO:0005546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine kinase/uracil phosphoribosyltransferase (predicted)","termid":"PBO:0005546"}


id: PBO:0040236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 6 beta","termid":"PBO:0040236"}


id: GO:0072762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbendazim stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to carbendazim","termid":"GO:1901597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to carbendazim","termid":"GO:0072762"}


id: PBO:0086308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with NADP(H) oxidoreductase activity; transcription is regulated by Stb5p in response to NADPH depletion induced by diamide; promoter contains a putative Stb5p binding site; protein abundance increases in response to DNA replication stress","termid":"PBO:0086308"}


id: GO:0003159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of an endothelium is generated and organized. Endothelium refers to the layer of cells lining blood vessels, lymphatics, the heart, and serous cavities, and is derived from bone marrow or mesoderm. Corneal endothelium is a special case, derived from neural crest cells.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"part_of","term_name":"endothelium development","termid":"GO:0003158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"morphogenesis of an endothelium","termid":"GO:0003159"}


id: PBO:0082334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-binding cassette (ABC) transporter; multidrug transporter involved in the pleiotropic drug resistance network; regulated by Pdr1p and Pdr3p","termid":"PBO:0082334"}


id: PBO:0043763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX11 pseudogene 1","termid":"PBO:0043763"}


id: GO:0033654
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any sac-like membranous structures (cisternae) in a chloroplast found in host cells, combined into stacks (grana) and present singly in the stroma (stroma thylakoids or frets) as interconnections between grana. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell chloroplast part","termid":"GO:0033653"},{"relation_name":"is_a","term_name":"host thylakoid membrane","termid":"GO:0044160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell chloroplast thylakoid membrane","termid":"GO:0033654"}


id: PBO:0043315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride intracellular channel 5","termid":"PBO:0043315"}


id: PBO:0061518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor binding SET domain protein 1","termid":"PBO:0061518"}


id: PBO:0044998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIAPH3 antisense RNA 1","termid":"PBO:0044998"}


id: GO:1902043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of extrinsic apoptotic signaling pathway via death domain receptors.","definition_xrefs":["GOC:TermGenie","PMID:17245429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extrinsic apoptotic signaling pathway via death domain receptors","termid":"GO:1902041"},{"relation_name":"is_a","term_name":"positive regulation of extrinsic apoptotic signaling pathway","termid":"GO:2001238"},{"relation_name":"positively_regulates","term_name":"extrinsic apoptotic signaling pathway via death domain receptors","termid":"GO:0008625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of extrinsic apoptotic signaling pathway via death domain receptors","synonyms":[{"name":"activation of death receptor-mediated apoptosis","type":"narrow"},{"name":"activation of extrinsic apoptotic signaling pathway via death domain receptors","type":"narrow"},{"name":"positive regulation of death receptor-mediated apoptosis","type":"narrow"},{"name":"up regulation of death receptor-mediated apoptosis","type":"narrow"},{"name":"up regulation of extrinsic apoptotic signaling pathway via death domain receptors","type":"exact"},{"name":"up-regulation of death receptor-mediated apoptosis","type":"narrow"},{"name":"up-regulation of extrinsic apoptotic signaling pathway via death domain receptors","type":"exact"},{"name":"upregulation of death receptor-mediated apoptosis","type":"narrow"},{"name":"upregulation of extrinsic apoptotic signaling pathway via death domain receptors","type":"exact"}],"termid":"GO:1902043"}


id: GO:0031018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the endocrine pancreas over time, from its formation to the mature structure. The endocrine pancreas is made up of islet cells that produce insulin, glucagon and somatostatin.","definition_xrefs":["GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"pancreas development","termid":"GO:0031016"},{"relation_name":"part_of","term_name":"endocrine system development","termid":"GO:0035270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocrine pancreas development","secondary_identifiers":["Reactome:R-HSA-186712"],"termid":"GO:0031018"}


id: GO:0050899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a nitrile, an organic compound containing trivalent nitrogen attached to one carbon atom.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"nitrile metabolic process","termid":"GO:0050898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nitrile catabolic process","synonyms":[{"name":"nitrile breakdown","type":"exact"},{"name":"nitrile catabolism","type":"exact"},{"name":"nitrile degradation","type":"exact"}],"termid":"GO:0050899"}


id: PBO:0001268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle organizing protein Mzt1 (predicted)","termid":"PBO:0001268"}


id: PBO:0050974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon omega 1 pseudogene 19","termid":"PBO:0050974"}


id: GO:0055037
data:
  {"annotated_genes":["SJAG_04343","SJAG_01448","SJAG_03915"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72793,79241,104481],"is_not":false,"summary":null,"term":"GO:0055037"}]},"cv_name":"cellular_component","definition":"An organelle consisting of a network of tubules that functions in targeting molecules, such as receptors transporters and lipids, to the plasma membrane.","definition_xrefs":["PMID:10930469","GOC:rph","GOC:dph","GOC:kmv","PMID:15601896","PMID:21556374","GOC:jid","PMID:16246101","PMID:21562044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome","termid":"GO:0005768"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01448":null,"SJAG_03915":null,"SJAG_04343":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0005737","GO:0005768","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"recycling endosome","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ERC","type":"related"},{"name":"endosomal recycling compartment","type":"exact"},{"name":"endosome recycling compartment","type":"related"}],"termid":"GO:0055037","terms_by_termid":{"GO:0055037":null}}


id: MONDO:0030438
data:
  {"annotated_genes":["SJAG_04067","SJAG_01970"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88011,88012],"is_not":false,"summary":null,"term":"MONDO:0030438"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia","termid":"MONDO:0020135"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01970":null,"SJAG_04067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"pontocerebellar hypoplasia, type 16","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619527","MEDGEN:1794197","UMLS:C5561987","DOID:0112333"],"synonyms":[{"name":"PCH16","type":"exact"}],"termid":"MONDO:0030438","terms_by_termid":{"MONDO:0030438":null},"xrefs":{"Monarch":{"xref_id":"0030438"}}}


id: PBO:0070545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 11","termid":"PBO:0070545"}


id: MONDO:1012521
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bilateral deafness and vestibular dysfunction, non-human animal","termid":"MONDO:1011710"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bilateral deafness and vestibular dysfunction, pig","secondary_identifiers":["OMIA:002148-9823"],"termid":"MONDO:1012521","xrefs":{"Monarch":{"xref_id":"1012521"}}}


id: GO:0006862
data:
  {"annotated_genes":["SJAG_03334","SJAG_00760","SJAG_04328","SJAG_02050","SJAG_03503","SJAG_00154","SJAG_00612"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015866"},{"annotations":[64693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903790"},{"annotations":[103180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"},{"annotations":[103181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"},{"annotations":[59189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140021"},{"annotations":[104677,59188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990544"},{"annotations":[109395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990548"},{"annotations":[94718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990549"},{"annotations":[80937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990519"}]},"cv_name":"biological_process","definition":"The directed movement of a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate, into, out of or within a cell.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate ester transport","termid":"GO:0015748"},{"relation_name":"is_a","term_name":"nucleobase-containing compound transport","termid":"GO:0015931"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00154":null,"SJAG_00612":null,"SJAG_00760":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_03503":null,"SJAG_04328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"nucleotide transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0006862","terms_by_termid":{"GO:0015866":null,"GO:0140021":null,"GO:1903790":null,"GO:1990519":null,"GO:1990544":null,"GO:1990548":null,"GO:1990549":null,"GO:1990553":null,"GO:1990554":null}}


id: GO:0000282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of the site where a daughter cell will form, in organisms that reproduce by budding. An example of this process is found in Saccharomyces cerevisiae.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of cell polarity","termid":"GO:0030010"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic cytokinesis","termid":"GO:0000281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"part_of","termid":"GO:0000281"}],"interesting_parent_ids":["GO:0008150","GO:0007163","GO:0000281","GO:0007049"],"is_obsolete":false,"name":"cellular bud site selection","synonyms":[{"name":"bud site selection/establishment of cell polarity","type":"broad"}],"termid":"GO:0000282"}


id: MONDO:0018203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, premature aging syndrome characterized by adulthood-onset cutaneous manifestations that result in a prematurely aged appearance (i.e. premature thinning and graying of scalp hair, loss of subcutaneous fat, tightening of skin) associated with prominent cardiovascular manifestations, such as accelerated atherosclerosis, calcific valve disease, and cardiomyopathy. Patients present loss of eyebrows and eyelashes in childhood and have a predisposition to develop malignancies.","definition_xrefs":["Orphanet:363618"],"direct_ancestors":[{"relation_name":"is_a","term_name":"premature aging syndrome","termid":"MONDO:0019303"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0019303"],"is_obsolete":false,"name":"LMNA-related cardiocutaneous progeria syndrome","secondary_identifiers":["GARD:21555","MEDGEN:1667690","UMLS:C4750858"],"synonyms":[{"name":"LCPS","type":"exact"}],"termid":"MONDO:0018203","xrefs":{"Monarch":{"xref_id":"0018203"}}}


id: GO:0034837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-mercaptobenzothiazole-cis-6,7-dihydrodiol = 6,7-dihydroxy-2-mercaptobenzothiazole + 2 H+ + 2 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-mercaptobenzothiazole-cis-6,7-dihydrodiol dehydrogenase activity (obsolete GO:0034837)","termid":"GO:0034837"}


id: PBO:0087039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L19A; rpl19a and rpl19b single null mutations result in slow growth, while the double null mutation is lethal; homologous to mammalian ribosomal protein L19, no bacterial homolog; RPL19A has a paralog, RPL19B, that arose from the whole genome duplication","termid":"PBO:0087039"}


id: MONDO:1011770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necrosis of digits, non-human animal","secondary_identifiers":["OMIA:001665"],"termid":"MONDO:1011770","xrefs":{"Monarch":{"xref_id":"1011770"}}}


id: PBO:0077353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM92 antisense RNA 1","termid":"PBO:0077353"}


id: PBO:0029615
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_with_normal_cell_shape","termid":"PBO:0029615"}


id: GO:0021995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of joining together the neural folds at either end of the neural tube.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"part_of","term_name":"neural tube closure","termid":"GO:0001843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuropore closure","termid":"GO:0021995"}


id: PBO:0030063
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_phosphoglycerate_mutase_activity","termid":"PBO:0030063"}


id: FYPO:0004630
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is lower than normal during the meiotic cell cycle. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level","termid":"FYPO:0000826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during meiotic cell cycle","synonyms":[{"name":"decreased RNA accumulation during meiotic cell cycle","type":"related"},{"name":"decreased transcript level during meiotic cell cycle","type":"exact"},{"name":"reduced RNA level during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0004630"}


id: GO:0099162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neurotransmitter loading into synaptic vesicles.","definition_xrefs":["PMID:25176177","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotransmitter transport","termid":"GO:0051588"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle cycle","termid":"GO:0098693"},{"relation_name":"regulates","term_name":"neurotransmitter loading into synaptic vesicle","termid":"GO:0098700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"regulation of neurotransmitter loading into synaptic vesicle","synonyms":[{"name":"regulation of neurotransmitter uptake into synaptic vesicle","type":"exact"},{"name":"regulation of synaptic vesicle neurotransmitter loading","type":"exact"}],"termid":"GO:0099162"}


id: PBO:0036153
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_methyltransferase_activity","termid":"PBO:0036153"}


id: PBO:0057727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1302-11","termid":"PBO:0057727"}


id: GO:0042850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-sorbose, the L-enantiomer of the ketohexose xylo-2-hexulose.","definition_xrefs":["GOC:mah","GOC:jsg","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-sorbose metabolic process","termid":"GO:0019312"},{"relation_name":"is_a","term_name":"hexose catabolic process","termid":"GO:0019320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"L-sorbose catabolic process","synonyms":[{"name":"L-sorbose breakdown","type":"exact"},{"name":"L-sorbose catabolism","type":"exact"},{"name":"L-sorbose degradation","type":"exact"}],"termid":"GO:0042850"}


id: MONDO:0010252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"X-linked intellectual disability with hypopituitarism","termid":"MONDO:0100195"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked, with panhypopituitarism","secondary_identifiers":["MEDGEN:394771","UMLS:C2678223","OMIM:300123"],"synonyms":[{"name":"intellectual developmental disorder, X-linked, with isolated growth hormone deficiency","type":"exact"},{"name":"intellectual disability, X-linked, with isolated Growth hormone deficiency","type":"related"},{"name":"intellectual disability, X-linked, with panhypopituitarism","type":"exact"},{"name":"mental retardation, X-linked, with isolated Growth hormone deficiency","type":"related"},{"name":"mental retardation, X-linked, with panhypopituitarism","type":"related"}],"termid":"MONDO:0010252","xrefs":{"Monarch":{"xref_id":"0010252"}}}


id: GO:0060204
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of the clathrin-sculpted glutamate transport vesicle.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"clathrin-sculpted glutamate transport vesicle","termid":"GO:0060199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"clathrin-sculpted glutamate transport vesicle lumen","synonyms":[{"name":"clathrin sculpted glutamate constitutive secretory pathway transport vesicle lumen","type":"exact"},{"name":"clathrin sculpted glutamate transport vesicle lumen","type":"exact"}],"termid":"GO:0060204"}


id: PBO:0116765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAV2 divergent transcript","termid":"PBO:0116765"}


id: MONDO:0958071
data:
  {"annotated_genes":["SJAG_03686","SJAG_00573"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87588,87589],"is_not":false,"summary":null,"term":"MONDO:0958071"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Hao-Fountain syndrome","termid":"MONDO:0014805"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00573":null,"SJAG_03686":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"Hao-Fountain syndrome due to USP7 mutation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:643538","MEDGEN:1853151","OMIM:616863","UMLS:C5816734"],"synonyms":[{"name":"USP7-related neurodevelopmental disorder","type":"exact"}],"termid":"MONDO:0958071","terms_by_termid":{"MONDO:0958071":null},"xrefs":{"Monarch":{"xref_id":"0958071"}}}


id: PBO:0051271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa joining 2","termid":"PBO:0051271"}


id: PBO:0066551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 14","termid":"PBO:0066551"}


id: PBO:0073285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 6","termid":"PBO:0073285"}


id: PBO:0051475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (IV)-65 (pseudogene)","termid":"PBO:0051475"}


id: MONDO:0957197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A histone mutated tumor that has material basis in mutations in codon 34 of the H3 histone family 3A protein.","definition_xrefs":["DOID:0080880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glioma","termid":"MONDO:0021042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diffuse glioma, H3 G34 mutant","termid":"MONDO:0957197","xrefs":{"Monarch":{"xref_id":"0957197"}}}


id: PBO:0080026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 12","termid":"PBO:0080026"}


id: GO:0050021
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arabinono-1,4-lactone + H2O = L-arabinonate + H+.","definition_xrefs":["EC:3.1.1.15","RHEA:16217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"L-arabinonolactonase activity","secondary_identifiers":["KEGG_REACTION:R02526","MetaCyc:L-ARABINONOLACTONASE-RXN"],"synonyms":[{"name":"L-arabinono-1,4-lactone lactonohydrolase activity","type":"related"}],"termid":"GO:0050021"}


id: FYPO:0000513
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which karyogamy involved in conjugation with cellular fusion begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear fusion during mating","termid":"FYPO:0000510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000301","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of nuclear fusion during mating","synonyms":[{"name":"delayed nuclear fusion during mating","type":"exact"},{"name":"delayed onset of karyogamy","type":"exact"},{"name":"delayed onset of karyogamy involved in conjugation with cellular fusion","type":"exact"},{"name":"nuclear fusion during mating: delayed","type":"related"}],"termid":"FYPO:0000513"}


id: MONDO:0018549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete late-onset scapuloperoneal muscular dystrophy with hyaline bodies (obsolete MONDO:0018549)","secondary_identifiers":["Orphanet:431263"],"synonyms":[{"name":"late-onset SPMD with hyaline bodies","type":"exact"},{"name":"late-onset scapuloperoneal syndrome, myopathic type","type":"exact"}],"termid":"MONDO:0018549","xrefs":{"Monarch":{"xref_id":"0018549"}}}


id: PR:Q10486
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17C9.15c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17C9.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.15c","synonyms":[{"name":"Spom972h-SPAC17C9.15c","type":"exact"}],"termid":"PR:Q10486"}


id: PBO:0064662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A like 4E","termid":"PBO:0064662"}


id: MONDO:0002310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"anterior dislocation of lens","secondary_identifiers":["MEDGEN:509941","icd11.foundation:2072438249","SCTID:37283009","UMLS:C0155372","ICD10CM:H27.12","ICD9:379.33","DOID:2460"],"termid":"MONDO:0002310","xrefs":{"Monarch":{"xref_id":"0002310"}}}


id: PBO:0067844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 146","termid":"PBO:0067844"}


id: PBO:0077118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 44","termid":"PBO:0077118"}


id: PR:Q9P7C1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- erj5 gene.","definition_xrefs":["UniProtKB:Q9P7C1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized J domain-containing protein C2E1P5.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2E1P5.03","synonyms":[{"name":"Spom972h-erj5","type":"exact"}],"termid":"PR:Q9P7C1"}


id: PBO:0047258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 242 member A","termid":"PBO:0047258"}


id: PBO:0091658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane ferric-chelate reductase Frp1","termid":"PBO:0091658"}


id: PBO:0034405
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_process_that_occurs_in","termid":"PBO:0034405"}


id: GO:0140267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The entry of a symbiont into the cytoplasm of a host cell, triggered by an interaction between the bilayer of a host membrane and a membrane-penetration symbiont protein. This process mediates the entry of some non-enveloped virus into host cells, and results in the release of the virus contents into the host cell cytoplasm.","definition_xrefs":["VZ:985","PMID:20427561","PMID:25055856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host membrane","termid":"GO:0141171"},{"relation_name":"part_of","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont entry into host cell via permeabilization of host membrane","synonyms":[{"name":"viral entry via permeabilization of host membrane","type":"narrow"}],"termid":"GO:0140267"}


id: PBO:0042924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorionic gonadotropin subunit beta 2","termid":"PBO:0042924"}


id: GO:1905101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of apoptosome assembly.","definition_xrefs":["GOC:TermGenie","PMID:26265044","GO_REF:0000058","GOC:BHF","GOC:BHF_miRNA","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of apoptosome assembly","termid":"GO:1905100"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic signaling pathway","termid":"GO:2001234"},{"relation_name":"negatively_regulates","term_name":"apoptosome assembly","termid":"GO:0097314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of apoptosome assembly","synonyms":[{"name":"down regulation of apoptosome assembly","type":"exact"},{"name":"down regulation of apoptosome formation","type":"exact"},{"name":"down-regulation of apoptosome assembly","type":"exact"},{"name":"down-regulation of apoptosome formation","type":"exact"},{"name":"downregulation of apoptosome assembly","type":"exact"},{"name":"downregulation of apoptosome formation","type":"exact"},{"name":"inhibition of apoptosome assembly","type":"narrow"},{"name":"inhibition of apoptosome formation","type":"narrow"},{"name":"negative regulation of apoptosome formation","type":"exact"}],"termid":"GO:1905101"}


id: MONDO:0024490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"general tumor grading characteristic","termid":"MONDO:0024489"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor grade X, general grading system","synonyms":[{"name":"undetermined grade","type":"exact"}],"termid":"MONDO:0024490","xrefs":{"Monarch":{"xref_id":"0024490"}}}


id: MONDO:0018629
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"stiff-person syndrome","termid":"MONDO:0008491"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focal stiff limb syndrome","secondary_identifiers":["UMLS:C4324606","Orphanet:443804","GARD:17756","MEDGEN:1672496"],"synonyms":[{"name":"Stiff leg syndrome","type":"exact"},{"name":"focal stiff-person syndrome","type":"exact"}],"termid":"MONDO:0018629","xrefs":{"Monarch":{"xref_id":"0018629"}}}


id: PR:O14089
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- kap104 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin subunit beta-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.06c","synonyms":[{"name":"Spom972h-kap104","type":"exact"},{"name":"TRN (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Transportin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"importin-104 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"karyopherin subunit beta-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"karyopherin-104 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14089"}


id: PBO:0081287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 71","termid":"PBO:0081287"}


id: PBO:0078501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon TAT) 3-1","termid":"PBO:0078501"}


id: PBO:0016886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR97","termid":"PBO:0016886"}


id: GO:0102002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-valine + 2 O2 + 2 NADPH(4-) + 2 H+ = (E)-2-methylpropanal oxime + 2 NADP(3-) + carbon dioxide + 3 H2O.","definition_xrefs":["EC:1.14.14.38"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"valine N-monooxygenase (oxime forming) activity","secondary_identifiers":["RHEA:28606","MetaCyc:1.14.13.118-RXN"],"termid":"GO:0102002"}


id: MONDO:0005895
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A parasitic infection caused by trematodes of the Paragonimus genus. Humans are infected from ingestion of raw or undercooked food. It results in chronic lung infection and eosinophilia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helminthiasis","termid":"MONDO:0004664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paragonimiasis","secondary_identifiers":["MESH:D010237","NCIT:C84995","ICD10CM:B66.4","MEDGEN:14603","GARD:9815","ICD9:121.2","SCTID:30369007","EFO:0007418","UMLS:C0030424","icd11.foundation:1422824299","DOID:10699","Orphanet:658913"],"synonyms":[{"name":"Paragonimus westermani caused disease or disorder","type":"exact"},{"name":"Paragonimus westermani disease or disorder","type":"exact"},{"name":"Paragonimus westermani infection","type":"related"},{"name":"Paragonimus westermani infectious disease","type":"exact"},{"name":"infection by Paragonimus","type":"exact"},{"name":"lung fluke disease","type":"exact"},{"name":"lung fluke infection","type":"exact"},{"name":"pulmonary paragonimiasis","type":"exact"}],"termid":"MONDO:0005895","xrefs":{"Monarch":{"xref_id":"0005895"}}}


id: PBO:0056144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose-6-phosphate receptor, cation dependent","termid":"PBO:0056144"}


id: PBO:0077927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTE2 antisense RNA 1","termid":"PBO:0077927"}


id: PBO:0034163
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-releases_neurotransmitter","termid":"PBO:0034163"}


id: PBO:0001427
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bowen Conradi syndrome","termid":"PBO:0001427"}


id: MONDO:0020152
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare eyelid malformation (obsolete MONDO:0020152)","secondary_identifiers":["Orphanet:98561"],"synonyms":[{"name":"eyelid malformation","type":"related"}],"termid":"MONDO:0020152","xrefs":{"Monarch":{"xref_id":"0020152"}}}


id: GO:1905895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to tunicamycin.","definition_xrefs":["PMID:21803450","GO_REF:0000058","GOC:bc","GOC:TermGenie","GOC:aruk"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular response to tunicamycin (obsolete GO:1905895)","synonyms":[{"name":"down regulation of cellular response to tunicamycin","type":"exact"},{"name":"down-regulation of cellular response to tunicamycin","type":"exact"},{"name":"downregulation of cellular response to tunicamycin","type":"exact"},{"name":"inhibition of cellular response to tunicamycin","type":"narrow"}],"termid":"GO:1905895"}


id: PBO:0070334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 6","termid":"PBO:0070334"}


id: FYPO:0002093
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between sister chromatids is decreased during meiosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic sister chromatid cohesion","termid":"FYPO:0002092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000641","FYPO:0001985","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"decreased meiotic sister chromatid cohesion","synonyms":[{"name":"decreased sister chromatid cohesion during meiosis","type":"exact"},{"name":"reduced meiotic sister chromatid cohesion","type":"exact"}],"termid":"FYPO:0002093"}


id: GO:0052890
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a flavin.","definition_xrefs":["EC:1.3.8.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor","termid":"GO:0052890"}


id: PBO:0079656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V1 pseudogene 4","termid":"PBO:0079656"}


id: MONDO:0002100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm involving the cardiovascular system.","definition_xrefs":["NCIT:C114940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"cardiovascular neoplasm","termid":"MONDO:0024757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cardiovascular cancer","secondary_identifiers":["DOID:176","MEDGEN:858066","UMLS:C3898472"],"synonyms":[{"name":"cancer of cardiovascular system","type":"exact"},{"name":"cardiovascular neoplasm","type":"broad"},{"name":"cardiovascular system cancer","type":"exact"},{"name":"cardiovascular tumors","type":"exact"},{"name":"cardiovascular tumours","type":"exact"},{"name":"malignant cardiovascular neoplasm","type":"exact"},{"name":"malignant cardiovascular system neoplasm","type":"exact"},{"name":"malignant neoplasm of cardiovascular system","type":"exact"}],"termid":"MONDO:0002100","xrefs":{"Monarch":{"xref_id":"0002100"}}}


id: MONDO:0042499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete benign familial neonatal-infantile seizures (obsolete MONDO:0011140)","termid":"MONDO:0011140"},{"relation_name":"is_a","term_name":"benign familial infantile epilepsy","termid":"MONDO:0017615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"benign familial neonatal-infantile seizures 1","secondary_identifiers":["UMLS:C4551769","MEDGEN:1638448","GARD:856","DOID:0081114","OMIM:601764"],"synonyms":[{"name":"BFIC1","type":"related"},{"name":"BFIS1","type":"related"},{"name":"benign familial infantile convulsions syndrome","type":"related"},{"name":"benign familial infantile convulsions syndrome 1","type":"related"},{"name":"benign infantile familial convulsions","type":"related"},{"name":"benign infantile familial convulsions 1","type":"related"},{"name":"convulsions, benign familial infantile, 1","type":"related"},{"name":"seizures, benign familial infantile, 1","type":"related"}],"termid":"MONDO:0042499","xrefs":{"Monarch":{"xref_id":"0042499"}}}


id: GO:0043367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized T cell acquires specialized features of a mature CD4-positive, alpha-beta T cell.","definition_xrefs":["CL:0000624","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell activation","termid":"GO:0035710"},{"relation_name":"is_a","term_name":"alpha-beta T cell differentiation","termid":"GO:0046632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4-positive, alpha-beta T cell differentiation","synonyms":[{"name":"CD4-positive, alpha beta T cell development","type":"related"},{"name":"CD4-positive, alpha beta T cell differentiation","type":"exact"},{"name":"CD4-positive, alpha-beta T lymphocyte differentiation","type":"exact"},{"name":"CD4-positive, alpha-beta T-cell differentiation","type":"exact"},{"name":"CD4-positive, alpha-beta T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0043367"}


id: GO:0047056
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-tetrahydrocolumbamine + [reduced NADPH--hemoprotein reductase] + O2 -> (S)-canadine + [oxidized NADPH--hemoprotein reductase] + 2 H2O.","definition_xrefs":["RHEA:21456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"(S)-canadine synthase activity","secondary_identifiers":["MetaCyc:1.1.3.36-RXN","KEGG_REACTION:R04400","EC:1.14.19.68"],"synonyms":[{"name":"(S)-tetrahydroberberine synthase activity","type":"related"},{"name":"(S)-tetrahydrocolumbamine oxidase (methylenedioxy-bridge-forming) activity","type":"related"}],"termid":"GO:0047056"}


id: GO:1902842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of netrin-activated signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:24004945","GO_REF:0000058","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of netrin-activated signaling pathway","termid":"GO:1902841"},{"relation_name":"negatively_regulates","term_name":"netrin-activated signaling pathway","termid":"GO:0038007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of netrin-activated signaling pathway","synonyms":[{"name":"down regulation of netrin signaling pathway","type":"exact"},{"name":"down regulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"down regulation of netrin-activated signaling pathway","type":"exact"},{"name":"down regulation of netrin-activated signalling pathway","type":"exact"},{"name":"down regulation of netrin-mediated signaling pathway","type":"exact"},{"name":"down-regulation of netrin signaling pathway","type":"exact"},{"name":"down-regulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"down-regulation of netrin-activated signaling pathway","type":"exact"},{"name":"down-regulation of netrin-activated signalling pathway","type":"exact"},{"name":"down-regulation of netrin-mediated signaling pathway","type":"exact"},{"name":"downregulation of netrin signaling pathway","type":"exact"},{"name":"downregulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"downregulation of netrin-activated signaling pathway","type":"exact"},{"name":"downregulation of netrin-activated signalling pathway","type":"exact"},{"name":"downregulation of netrin-mediated signaling pathway","type":"exact"},{"name":"inhibition of netrin signaling pathway","type":"narrow"},{"name":"inhibition of netrin-activated signal transduction pathway","type":"narrow"},{"name":"inhibition of netrin-activated signaling pathway","type":"narrow"},{"name":"inhibition of netrin-activated signalling pathway","type":"narrow"},{"name":"inhibition of netrin-mediated signaling pathway","type":"narrow"},{"name":"negative regulation of netrin signaling pathway","type":"exact"},{"name":"negative regulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"negative regulation of netrin-activated signalling pathway","type":"exact"},{"name":"negative regulation of netrin-mediated signaling pathway","type":"exact"}],"termid":"GO:1902842"}


id: GO:1903849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of aorta morphogenesis.","definition_xrefs":["GOC:BHF","GOC:rph","PMID:22269326","GOC:BHF_miRNA","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of aorta morphogenesis","termid":"GO:1903847"},{"relation_name":"is_a","term_name":"positive regulation of artery morphogenesis","termid":"GO:1905653"},{"relation_name":"positively_regulates","term_name":"aorta morphogenesis","termid":"GO:0035909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of aorta morphogenesis","synonyms":[{"name":"activation of aorta morphogenesis","type":"narrow"},{"name":"up regulation of aorta morphogenesis","type":"exact"},{"name":"up-regulation of aorta morphogenesis","type":"exact"},{"name":"upregulation of aorta morphogenesis","type":"exact"}],"termid":"GO:1903849"}


id: PBO:0044202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin L family member 3, pseudogene","termid":"PBO:0044202"}


id: PBO:0034603
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_meiosis_II","termid":"PBO:0034603"}


id: PBO:0017773
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha Amylase Homolog","termid":"PBO:0017773"}


id: GO:0043777
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cobalt-precorrin 7 + S-adenosyl-L-methionine = cobalt-precorrin 8 + S-adenosyl-L-homocysteine + CO2.","definition_xrefs":["MetaCyc:RXN-8767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"cobalt-precorrin-7 C15-methyltransferase activity","secondary_identifiers":["RHEA:34591"],"synonyms":[{"name":"cobalt-precorrin 7 C15-methyltransferase activity","type":"exact"},{"name":"precorrin-6 methyltransferase","type":"broad"},{"name":"precorrin-6Y C5,15-methyltransferase (decarboxylating)","type":"broad"},{"name":"precorrin-6Y methylase","type":"broad"}],"termid":"GO:0043777"}


id: PBO:0070001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1297, pseudogene","termid":"PBO:0070001"}


id: PBO:0090674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hrd1 ubiquitin ligase complex subunit Ufd1","termid":"PBO:0090674"}


id: GO:0018141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a peptidyl cysteine-peptidyl lysine cross-link by the condensation of a cysteine thiol with the carbonyl of the preceding residue and alpha-beta dehydrogenation.","definition_xrefs":["RESID:AA0245"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-lysine thiazolecarboxylic acid (obsolete GO:0018141)","termid":"GO:0018141"}


id: PBO:0090098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Rst2","termid":"PBO:0090098"}


id: GO:1905404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of activated CD8-positive, alpha-beta T cell apoptotic process.","definition_xrefs":["PMID:24187568","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell apoptotic process","termid":"GO:0070234"},{"relation_name":"is_a","term_name":"regulation of activated CD8-positive, alpha-beta T cell apoptotic process","termid":"GO:1905402"},{"relation_name":"positively_regulates","term_name":"activated CD8-positive, alpha-beta T cell apoptotic process","termid":"GO:1905397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of activated CD8-positive, alpha-beta T cell apoptotic process","synonyms":[{"name":"activation of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"activation of activated CD8-positive, alpha-beta T cell apoptotic process","type":"narrow"},{"name":"activation of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"activation of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"narrow"},{"name":"activation of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"activation of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"narrow"},{"name":"activation of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"activation of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"narrow"},{"name":"positive regulation of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"positive regulation of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"positive regulation of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"positive regulation of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"positive regulation of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"positive regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"positive regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"up regulation of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"up regulation of activated CD8-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"up regulation of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"up regulation of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"up regulation of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"up regulation of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"up regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"up regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"up-regulation of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"up-regulation of activated CD8-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"up-regulation of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"up-regulation of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"up-regulation of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"up-regulation of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"up-regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"up-regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"upregulation of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"upregulation of activated CD8-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"upregulation of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"upregulation of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"upregulation of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"upregulation of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"upregulation of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"upregulation of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"}],"termid":"GO:1905404"}


id: PBO:0079378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 13","termid":"PBO:0079378"}


id: PBO:0081060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 18","termid":"PBO:0081060"}


id: GO:0032020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent addition to a protein of ISG15, a ubiquitin-like protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification by small protein conjugation","termid":"GO:0032446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"ISG15-protein conjugation","termid":"GO:0032020"}


id: PBO:0069658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 935, pseudogene","termid":"PBO:0069658"}


id: GO:0047018
data:
  {"annotated_genes":["SJAG_01869"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93634],"is_not":false,"summary":null,"term":"GO:0047018"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-ethanol + NAD+ = (indol-3-yl)acetaldehyde + H+ + NADH.","definition_xrefs":["EC:1.1.1.190","RHEA:14873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NAD+) activity","termid":"GO:0004022"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01869":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"indole-3-acetaldehyde reductase (NADH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:1.1.1.190-RXN","KEGG_REACTION:R02679"],"synonyms":[{"name":"(indol-3-yl)ethanol:NAD+ oxidoreductase activity","type":"related"},{"name":"indole-3-ethanol:NAD+ oxidoreductase activity","type":"related"},{"name":"indoleacetaldehyde reductase activity","type":"related"}],"termid":"GO:0047018","terms_by_termid":{"GO:0047018":null}}


id: GO:1905103
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the lysosome membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GO_REF:0000064","GOC:bf","GOC:PARL","GOC:TermGenie","PMID:26134396"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of lysosomal membrane (obsolete GO:1905103)","synonyms":[{"name":"integral component of lysosome membrane","type":"exact"},{"name":"integral to lysosomal membrane","type":"narrow"}],"termid":"GO:1905103"}


id: PBO:0117117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC7A10 antisense RNA 1","termid":"PBO:0117117"}


id: MONDO:0700112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any visceral hetetotaxy in which the cause of the disease is a mutation in the NODAL gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visceral heterotaxy","termid":"MONDO:0018677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterotaxy, visceral, 5, autosomal","secondary_identifiers":["UMLS:C3495537","OMIM:270100","MEDGEN:501198"],"synonyms":[{"name":"HTX5","type":"exact"},{"name":"NODAL visceral heterotaxy","type":"exact"},{"name":"SIV","type":"exact"},{"name":"situs inversus viscerum","type":"exact"},{"name":"visceral heterotaxy caused by mutation in NODAL","type":"exact"}],"termid":"MONDO:0700112","xrefs":{"Monarch":{"xref_id":"0700112"}}}


id: MONDO:0015076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of tumor of parathyroid gland that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare parathyroid tumor (obsolete MONDO:0015076)","secondary_identifiers":["Orphanet:100090","ICD10CM:D35.1"],"synonyms":[{"name":"rare tumor of parathyroid gland","type":"exact"}],"termid":"MONDO:0015076","xrefs":{"Monarch":{"xref_id":"0015076"}}}


id: GO:0033338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a medial fin over time, from its formation to the mature structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fin development","termid":"GO:0033333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"medial fin development","synonyms":[{"name":"median fin development","type":"exact"}],"termid":"GO:0033338"}


id: FYECO:0000340
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which an iron chelator was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ iron chelator","termid":"FYECO:0000340"}


id: PATO:0001668
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being in close proximity and physically interacting with another entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"associated with","synonyms":[{"name":"associated","type":"exact"}],"termid":"PATO:0001668"}


id: PBO:0040105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acylsphingosine amidohydrolase 1","termid":"PBO:0040105"}


id: PBO:0058002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3926-1","termid":"PBO:0058002"}


id: PBO:0043961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin gamma F, pseudogene","termid":"PBO:0043961"}


id: MONDO:0018727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete immunodeficiency due to a complement regulatory deficiency (obsolete MONDO:0018727)","secondary_identifiers":["Orphanet:459348"],"termid":"MONDO:0018727","xrefs":{"Monarch":{"xref_id":"0018727"}}}


id: PBO:0069820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1106, pseudogene","termid":"PBO:0069820"}


id: GO:0050385
data:
  {"annotated_genes":["SJAG_05287"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76104],"is_not":false,"summary":null,"term":"GO:0050385"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-ureidoglycolate = glyoxylate + urea.","definition_xrefs":["EC:4.3.2.3","RHEA:11304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidine-lyase activity","termid":"GO:0016842"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"ureidoglycolate lyase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:UREIDOGLYCOLATE-LYASE-RXN","KEGG_REACTION:R00776"],"synonyms":[{"name":"(S)-ureidoglycolate urea-lyase (glyoxylate-forming)","type":"related"},{"name":"(S)-ureidoglycolate urea-lyase activity","type":"related"},{"name":"ureidoglycolase activity","type":"related"},{"name":"ureidoglycolatase activity","type":"related"},{"name":"ureidoglycolate hydrolase activity","type":"related"}],"termid":"GO:0050385","terms_by_termid":{"GO:0050385":null}}


id: MONDO:0020444
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Subaortic course of innominate vein is a rare congential anomaly of the great veins characterized by an anomalous course of the left brachiocephalic vein, passing from left to right below the aortic arch and entering the superior vena cava below the orifice of the azygos vein. Patients are frequently asymptomatic and diagnosed incidentally on imaging studies. Other cardiac malformations may be associated.","definition_xrefs":["Orphanet:99113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of superior vena cava","termid":"MONDO:0019829"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subaortic course of innominate vein","secondary_identifiers":["MEDGEN:1637333","UMLS:C4707821","GARD:19656","SCTID:766756002"],"synonyms":[{"name":"subaortic course of brachiocephalic vein","type":"exact"}],"termid":"MONDO:0020444","xrefs":{"Monarch":{"xref_id":"0020444"}}}


id: PBO:0054868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2282","termid":"PBO:0054868"}


id: PBO:0043032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 4B","termid":"PBO:0043032"}


id: GO:0060340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of a type I interferon-mediated signaling pathway.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"positive regulation of innate immune response","termid":"GO:0045089"},{"relation_name":"is_a","term_name":"regulation of type I interferon-mediated signaling pathway","termid":"GO:0060338"},{"relation_name":"positively_regulates","term_name":"type I interferon-mediated signaling pathway","termid":"GO:0060337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of type I interferon-mediated signaling pathway","synonyms":[{"name":"positive regulation of type I interferon-mediated signalling pathway","type":"exact"}],"termid":"GO:0060340"}


id: FYPO:0006132
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mevalonate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular mevalonate level","synonyms":[{"name":"increased cellular mevalonate level during mitotic cell cycle","type":"related"},{"name":"increased cellular mevalonate level during vegetative growth","type":"exact"},{"name":"increased mevalonate accumulation","type":"related"}],"termid":"FYPO:0006132"}


id: PR:O94391
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC29A10.16c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A10.16c","synonyms":[{"name":"Spom972h-SPBC29A10.16c","type":"exact"}],"termid":"PR:O94391"}


id: GO:0090286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which cytoskeletal filaments are directly or indirectly linked to the nuclear membrane.","definition_xrefs":["GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoskeletal anchoring at nuclear membrane (obsolete GO:0090286)","termid":"GO:0090286"}


id: MONDO:0022765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic demyelinizing neuropathy with IgM monoclonal","termid":"MONDO:0022765","xrefs":{"Monarch":{"xref_id":"0022765"}}}


id: PR:O14311
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription initiation protein SPT3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11380:SF3","OMA:SCHPO04684","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit spt3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC61.02","secondary_identifiers":["UniProtKB:O14311"],"synonyms":[{"name":"Spom972h-SUPT3H","type":"exact"}],"termid":"PR:O14311"}


id: GO:2000090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesonephric glomerular mesangial cell proliferation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glomerular mesangial cell proliferation","termid":"GO:0072124"},{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in mesonephros development","termid":"GO:2000606"},{"relation_name":"regulates","term_name":"mesonephric glomerular mesangial cell proliferation involved in mesonephros development","termid":"GO:0061269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesonephric glomerular mesangial cell proliferation","termid":"GO:2000090"}


id: PBO:0063987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 21","termid":"PBO:0063987"}


id: SO:0002312
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An element that always exists within the promoter region of a prokaryotic gene.","definition_xrefs":["GREEKC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_promoter_element","termid":"SO:0002309"},{"relation_name":"part_of","term_name":"prokaryotic_promoter","termid":"SO:0002222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"core_prokaryotic_promoter_element","synonyms":[{"name":"core prokaryotic promoter element","type":"exact"},{"name":"general transcription factor binding site","type":"related"}],"termid":"SO:0002312"}


id: PBO:0026830
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_Lys63-specific_deubiquitinase_activity","termid":"PBO:0026830"}


id: GO:0060706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of the embryonic placenta.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"embryonic placenta development","termid":"GO:0001892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell differentiation involved in embryonic placenta development","termid":"GO:0060706"}


id: GO:0042924
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Interacting selectively and non-covalently and stoichiometrically with neuromedin U, a hypothalamic peptide involved in energy homeostasis and stress responses.","definition_xrefs":["GOC:jl","PMID:12584108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide binding","termid":"GO:0042923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"neuromedin U binding","synonyms":[{"name":"NMU binding","type":"exact"}],"termid":"GO:0042924"}


id: GO:0071800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a podosome, an actin-rich adhesion structure characterized by formation upon cell substrate contact and localization at the substrate-attached part of the cell.","definition_xrefs":["GOC:mah","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"is_a","term_name":"membraneless organelle assembly","termid":"GO:0140694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"podosome assembly","termid":"GO:0071800"}


id: GO:1905228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of adhesion of symbiont to host epithelial cell.","definition_xrefs":["PMID:15659068","GOC:TermGenie","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of adhesion of symbiont to host epithelial cell (obsolete GO:1905228)","synonyms":[{"name":"activation of adhesion of symbiont to host epithelial cell","type":"narrow"},{"name":"up regulation of adhesion of symbiont to host epithelial cell","type":"exact"},{"name":"up-regulation of adhesion of symbiont to host epithelial cell","type":"exact"},{"name":"upregulation of adhesion of symbiont to host epithelial cell","type":"exact"}],"termid":"GO:1905228"}


id: PBO:0072298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 16","termid":"PBO:0072298"}


id: PBO:0063074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) polymerase alpha","termid":"PBO:0063074"}


id: GO:0001508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which membrane potential cycles through a depolarizing spike, triggered in response to depolarization above some threshold, followed by repolarization. This cycle is driven by the flow of ions through various voltage gated channels with different thresholds and ion specificities.","definition_xrefs":["GOC:tb","ISBN:978-0-07-139011-8","GOC:dph","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"action potential","termid":"GO:0001508"}


id: SO:0001965
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified DNA guanine base,at the 8 carbon, often the product of DNA damage.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanine","termid":"SO:0001964"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"8_oxoguanine","secondary_identifiers":["http:http\\://www.pacificbiosciences.com/pdf/WP_Detecting_DNA_Base_Modifications_Using_SMRT_Sequencing.pdf"],"synonyms":[{"name":"8-oxoG","type":"exact"},{"name":"8-oxoguanine","type":"exact"}],"termid":"SO:0001965"}


id: PBO:0001327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain","termid":"PBO:0001327"}


id: MONDO:0006502
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Progressive and life-threatening pulmonary distress in the absence of an underlying pulmonary condition, usually following major trauma or surgery. Cases of neonatal respiratory distress syndrome are not included in this definition.","definition_xrefs":["NCIT:C3353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute respiratory failure","termid":"MONDO:0001208"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute respiratory distress syndrome","secondary_identifiers":["MedDRA:10001052","EFO:1000637","MEDGEN:1812214","UMLS:C2887484","icd11.foundation:1189702844","ICD10CM:J80"],"synonyms":[{"name":"ALI","type":"related"},{"name":"ARDS","type":"exact"},{"name":"Stiff lung","type":"related"},{"name":"acute lung injury","type":"related"},{"name":"acute respiratory distress syndrome","type":"exact"},{"name":"increased-permeability pulmonary edema","type":"related"},{"name":"increased-permeability pulmonary oedema","type":"related"},{"name":"non-cardiogenic pulmonary edema","type":"related"},{"name":"non-cardiogenic pulmonary oedema","type":"related"},{"name":"shock lung","type":"exact"}],"termid":"MONDO:0006502","xrefs":{"Monarch":{"xref_id":"0006502"}}}


id: PBO:0058873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9985","termid":"PBO:0058873"}


id: GO:0140751
data:
  {"annotated_genes":["SJAG_03982","SJAG_04755","SJAG_01938","SJAG_05313","SJAG_02698","SJAG_01878"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81698,72076,73996,115157,74627,75102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140750"}]},"cv_name":"molecular_function","definition":"A chromatin remodeler activity that slides core histone octamers along chromosomal DNA.","definition_xrefs":["PMID:10466730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent chromatin remodeler activity","termid":"GO:0140658"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01878":null,"SJAG_01938":null,"SJAG_02698":null,"SJAG_03982":null,"SJAG_04755":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003674","GO:0140097","GO:0003824"],"is_obsolete":false,"name":"histone octamer slider activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"histone octamer sliding activity","type":"exact"}],"termid":"GO:0140751","terms_by_termid":{"GO:0140750":null}}


id: PBO:0087401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Stress-responsive transcriptional activator; activated in stochastic pulses of nuclear localization in response to various stress conditions; binds DNA at stress response elements of responsive genes; light sensing pathway component that accumulates in the nucleus in response to blue light; relative distribution to nucleus increases upon DNA replication stress","termid":"PBO:0087401"}


id: GO:0102175
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-beta-hydroxysteroid-4-alpha-carboxylate + NAD+ = a 3-oxosteroid + CO2 + NADH.","definition_xrefs":["RHEA:34775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-beta-hydroxysteroid dehydrogenase [NAD(P)+]/C4-decarboxylase activity","termid":"GO:0000252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3-beta-hydroxysteroid dehydrogenase (NAD+)/C4-decarboxylase activity","secondary_identifiers":["EC:1.1.1.418","MetaCyc:RXN-11928"],"termid":"GO:0102175"}


id: GO:0018984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving naphthalenesulfonate, sulfonated derivatives of naphthalene.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid metabolic process","termid":"GO:0006082"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"naphthalenesulfonate metabolic process","secondary_identifiers":["GO:0018932","UM-BBD_pathwayID:nphs"],"synonyms":[{"name":"naphthalenesulfonate metabolism","type":"exact"},{"name":"naphthalenesulphonate metabolic process","type":"exact"},{"name":"naphthalenesulphonate metabolism","type":"exact"}],"termid":"GO:0018984"}


id: PR:Q92462
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pub1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase pub1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11G7.02","synonyms":[{"name":"Spom972h-pub1","type":"exact"}],"termid":"PR:Q92462"}


id: PBO:0075026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-37","termid":"PBO:0075026"}


id: FYPO:0001953
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of calcium ions into a cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abnormal calcium import","synonyms":[{"name":"abnormal calcium import during mitotic cell cycle","type":"related"},{"name":"abnormal calcium import during vegetative growth","type":"exact"},{"name":"abnormal calcium import into cell","type":"exact"},{"name":"abnormal calcium ion import","type":"exact"},{"name":"abnormal calcium ion import across plasma membrane","type":"exact"},{"name":"abnormal cellular calcium import","type":"exact"}],"termid":"FYPO:0001953"}


id: MONDO:0011184
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"specific language disorder","termid":"MONDO:0016226"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood apraxia of speech","secondary_identifiers":["OMIM:602081","Orphanet:209908","UMLS:C0750927","GARD:12889","ICD9:315.39","SCTID:229703009","DOID:0111275","icd11.foundation:1590154825","MEDGEN:152917"],"synonyms":[{"name":"CAS","type":"exact"},{"name":"SPCH1","type":"related"},{"name":"articulatory apraxia","type":"related"},{"name":"childhood apraxia of speech","type":"exact"},{"name":"das","type":"related"},{"name":"developmental apraxia of speech","type":"related"},{"name":"developmental verbal apraxia","type":"related"},{"name":"developmental verbal dyspraxia","type":"exact"},{"name":"speech and language disorder with orofacial dyspraxia","type":"exact"},{"name":"speech-language disorder 1","type":"related"},{"name":"speech-language disorder type 1","type":"exact"},{"name":"speech-language disorder-1","type":"related"}],"termid":"MONDO:0011184","xrefs":{"Monarch":{"xref_id":"0011184"}}}


id: PBO:0083514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF IST1/YNL265C","termid":"PBO:0083514"}


id: PR:Q9UTK3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nicotinate phosphoribosyltransferase PncB that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinate phosphoribosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1486.06","secondary_identifiers":["UniProtKB:Q9UTK3"],"synonyms":[{"name":"NAPRTase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pncB","type":"exact"}],"termid":"PR:Q9UTK3"}


id: GO:0007543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates the interactions between somatic cells and gonadal cells that ultimately results in the specification of sexual status of the organism.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication","termid":"GO:0007154"},{"relation_name":"part_of","term_name":"primary sex determination, germ-line","termid":"GO:0007542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sex determination, somatic-gonadal interaction","synonyms":[{"name":"sex determination, somatic/gonadal interaction","type":"exact"}],"termid":"GO:0007543"}


id: PBO:0036157
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cytoskeleton_during_meiosis","termid":"PBO:0036157"}


id: PBO:0043791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPEB2 divergent transcript","termid":"PBO:0043791"}


id: PBO:0039895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 1","termid":"PBO:0039895"}


id: PBO:0050048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, K (pseudogene)","termid":"PBO:0050048"}


id: PBO:0088515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S7","termid":"PBO:0088515"}


id: GO:0001216
data:
  {"annotated_genes":["SJAG_02810","SJAG_01694","SJAG_02311","SJAG_02406","SJAG_04388","SJAG_03484","SJAG_00693","SJAG_03143","SJAG_02326","SJAG_05006","SJAG_01532","SJAG_05247","SJAG_04855","SJAG_02730","SJAG_04249","SJAG_01243","SJAG_02218","SJAG_01583","SJAG_04839","SJAG_02252","SJAG_00987","SJAG_00698","SJAG_00266","SJAG_03879","SJAG_04749","SJAG_04813","SJAG_01916","SJAG_04712","SJAG_02472","SJAG_03183","SJAG_00210","SJAG_00802","SJAG_03735","SJAG_03519","SJAG_05288","SJAG_01307","SJAG_03346","SJAG_05153","SJAG_01062","SJAG_03538","SJAG_03241","SJAG_04009","SJAG_00163","SJAG_04092","SJAG_04036"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79145,81880,65039,90604,100231,109816,79187,102319,76782,110889,62248,104098,91281,90855,110650,90272,118330,76564,89846,93732,62009,101317,113735,99105,116440,68232,81166,74227,106266,107669,64152,68627,89776,57431,107943,98390,111201,117933,109412,111538,94568,115544,70330,77550,89411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001228"}]},"cv_name":"molecular_function","definition":"A DNA-binding transcription factor activity that activates or increases transcription of specific gene sets.","definition_xrefs":["GOC:txnOH-2018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription factor activity","termid":"GO:0003700"}],"gene_count":45,"genes_by_uniquename":{"SJAG_00163":null,"SJAG_00210":null,"SJAG_00266":null,"SJAG_00693":null,"SJAG_00698":null,"SJAG_00802":null,"SJAG_00987":null,"SJAG_01062":null,"SJAG_01243":null,"SJAG_01307":null,"SJAG_01532":null,"SJAG_01583":null,"SJAG_01694":null,"SJAG_01916":null,"SJAG_02218":null,"SJAG_02252":null,"SJAG_02311":null,"SJAG_02326":null,"SJAG_02406":null,"SJAG_02472":null,"SJAG_02730":null,"SJAG_02810":null,"SJAG_03143":null,"SJAG_03183":null,"SJAG_03241":null,"SJAG_03346":null,"SJAG_03484":null,"SJAG_03519":null,"SJAG_03538":null,"SJAG_03735":null,"SJAG_03879":null,"SJAG_04009":null,"SJAG_04036":null,"SJAG_04092":null,"SJAG_04249":null,"SJAG_04388":null,"SJAG_04712":null,"SJAG_04749":null,"SJAG_04813":null,"SJAG_04839":null,"SJAG_04855":null,"SJAG_05006":null,"SJAG_05153":null,"SJAG_05247":null,"SJAG_05288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003700"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140110"}],"interesting_parent_ids":["GO:0003700","GO:0140110","GO:0003674"],"is_obsolete":false,"name":"DNA-binding transcription activator activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0001140","GO:0001215"],"synonyms":[{"name":"bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription","type":"related"},{"name":"bacterial-type RNA polymerase transcriptional activator activity, metal ion regulated sequence-specific DNA binding","type":"narrow"},{"name":"bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding","type":"narrow"},{"name":"metal ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in positive regulation of transcription","type":"narrow"},{"name":"sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in positive regulation of transcription","type":"narrow"},{"name":"transcriptional activator activity, bacterial-type RNA polymerase core promoter proximal region sequence-specific binding","type":"narrow"},{"name":"transcriptional activator activity, bacterial-type RNA polymerase proximal promoter sequence-specific DNA binding","type":"related"}],"termid":"GO:0001216","terms_by_termid":{"GO:0001228":null}}


id: GO:0016850
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A grouping term for lyases that cannot be more accurately categorized.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete other lyase activity (obsolete GO:0016850)","synonyms":[{"name":"other lyase activity","type":"exact"}],"termid":"GO:0016850"}


id: PBO:0082921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytochrome c isoform 2, expressed under hypoxic conditions; also known as iso-2-cytochrome c; electron carrier of the mitochondrial intermembrane space that transfers electrons from ubiquinone-cytochrome c oxidoreductase to cytochrome c oxidase during cellular respiration; protein abundance increases in response to DNA replication stress; CYC7 has a paralog, CYC1, that arose from the whole genome duplication","termid":"PBO:0082921"}


id: GO:0052364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism in its symbiont resulting in the breakdown of substances. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by host of substance in symbiont (obsolete GO:0052364)","termid":"GO:0052364"}


id: MONDO:0012193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant limb-girdle muscular dystrophy (LGMD1G) is a mild subtype of autosomal dominant limb-girdle muscular dystrophy characterized by a typically adult onset of mild, progressive, proximal weakness of pelvic and shoulder girdle muscles and progressive, permanent finger and toes flexion limitation without flexion contractures. Normal to highly elevated creatine kinase serum levels are observed.","definition_xrefs":["Orphanet:55596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy, limb-girdle, autosomal dominant","termid":"MONDO:0015151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant limb-girdle muscular dystrophy type 1G","secondary_identifiers":["DOID:0110306","UMLS:C1836765","MESH:C563794","GARD:12531","OMIM:609115","SCTID:719990003","MEDGEN:322993"],"synonyms":[{"name":"HNRNPDL autosomal dominant limb-girdle muscular dystrophy","type":"exact"},{"name":"LGMD1G","type":"exact"},{"name":"autosomal dominant limb-girdle muscular dystrophy caused by mutation in HNRNPDL","type":"exact"},{"name":"limb-girdle muscular dystrophy type 1G","type":"related"},{"name":"limb-girdle muscular dystrophy, type 1G","type":"related"},{"name":"muscular dystrophy limb-girdle type 1G","type":"exact"},{"name":"muscular dystrophy, limb-girdle, autosomal dominant 3","type":"exact"}],"termid":"MONDO:0012193","xrefs":{"Monarch":{"xref_id":"0012193"}}}


id: GO:0044541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the proteolytic processing of an inactive enzyme to an active form in another organism.","definition_xrefs":["GOC:jl","GOC:fj"],"gene_count":0,"genotype_count":0,"name":"obsolete zymogen activation in another organism (obsolete GO:0044541)","synonyms":[{"name":"zymogen activation in other organism","type":"exact"}],"termid":"GO:0044541"}


id: FYPO:0004124
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to cadmium ions is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"decreased protein level during cellular response to cadmium ion","synonyms":[{"name":"decreased protein accumulation during cellular response to cadmium ion","type":"related"},{"name":"decreased protein level during cellular response to cadmium","type":"exact"},{"name":"decreased protein level during cellular response to cadmium ion during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to cadmium ion during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to cadmium ion","type":"exact"}],"termid":"FYPO:0004124"}


id: GO:0045159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a class II myosin, any member of the class of 'conventional' double-headed myosins that includes muscle myosin.","definition_xrefs":["GOC:mah","PMID:27697842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin binding","termid":"GO:0017022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515","GO:0008092"],"is_obsolete":false,"name":"myosin II binding","termid":"GO:0045159"}


id: GO:0007448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the anterior/posterior axis of the imaginal disc. Imaginal discs are epithelial infoldings in the larvae of holometabolous insects that rapidly develop into adult appendages during metamorphosis from larval to adult form.","definition_xrefs":["GOC:bf","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc pattern formation","termid":"GO:0007447"},{"relation_name":"is_a","term_name":"anterior/posterior pattern specification","termid":"GO:0009952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior/posterior pattern specification, imaginal disc","termid":"GO:0007448"}


id: MONDO:0014254
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any otofaciocervical syndrome in which the cause of the disease is a mutation in the PAX1 gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otofaciocervical syndrome","termid":"MONDO:0008163"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otofaciocervical syndrome 2","secondary_identifiers":["OMIM:615560","GARD:16503","UMLS:C5442121","MEDGEN:1782278"],"synonyms":[{"name":"OFC2","type":"related"},{"name":"OTFCS2","type":"related"},{"name":"PAX1 otofaciocervical syndrome","type":"exact"},{"name":"otofaciocervical syndrome 2","type":"exact"},{"name":"otofaciocervical syndrome caused by mutation in PAX1","type":"exact"},{"name":"otofaciocervical syndrome type 2","type":"exact"}],"termid":"MONDO:0014254","xrefs":{"Monarch":{"xref_id":"0014254"}}}


id: SO:0002374
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for scaRNA possessing both box C/D and box H/ACA sequence motifs, guiding both the methylation and pseudouridylation of snRNAs.","definition_xrefs":["PMID:24659245","PMID:17099227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scaRNA_gene","termid":"SO:0002339"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-D_H_ACA_box_scaRNA_gene","synonyms":[{"name":"C/D-H/ACA scaRNA gene","type":"exact"}],"termid":"SO:0002374"}


id: MONDO:0017991
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare inflammatory large-vessel vasculitis primarily affecting the aorta and its major branches, but also other large vessels, causing stenosis, occlusion, or aneurysm.","definition_xrefs":["Orphanet:3287"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"aortic arch defects","termid":"MONDO:0015236"},{"relation_name":"is_a","term_name":"disorder of pharynx","termid":"MONDO:0020592"},{"relation_name":"is_a","term_name":"arteritis","termid":"MONDO:0043494"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Takayasu arteritis","secondary_identifiers":["UMLS:C0039263","MedDRA:10043097","NCIT:C35062","ICD9:446.7","OMIM:207600","GARD:7730","icd11.foundation:1327645131","NANDO:2200423","MEDGEN:21458","ICD10CM:M31.4","NORD:806","SCTID:239937004","DOID:2508","NCIT:C34391","Orphanet:99079","EFO:1001857","MESH:D013625","NANDO:1200251"],"synonyms":[{"name":"Arteritis, Takayasu","type":"exact"},{"name":"TA","type":"related"},{"name":"Takayasu arteritis","type":"exact"},{"name":"Takayasu disease","type":"related"},{"name":"Takayasu's arteritis","type":"exact"},{"name":"Takayasu's disease","type":"exact"},{"name":"Young female arteritis","type":"related"},{"name":"aortic arch arteritis","type":"exact"},{"name":"aortic arch syndrome","type":"exact"},{"name":"cervical aortic arch","type":"exact"},{"name":"idiopathic aortitis","type":"exact"},{"name":"pharyngeal arch artery syndromic disease","type":"exact"},{"name":"pulseless disease","type":"related"}],"termid":"MONDO:0017991","xrefs":{"Monarch":{"xref_id":"0017991"}}}


id: PBO:0032760
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously thought to function in initiation","termid":"PBO:0032760"}


id: MONDO:0004593
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distension of the Bartholin gland duct caused by an accumulation of mucus in the duct, usually as a result of obstruction of the gland duct orifice.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bartholin duct cyst","secondary_identifiers":["MEDGEN:14032","UMLS:C0004767","ICD10CM:N75.0","SCTID:57044006","ICD9:616.2","DOID:851"],"synonyms":[{"name":"Bartholin's cyst","type":"exact"},{"name":"Bartholin's duct cyst","type":"exact"},{"name":"cyst of Bartholin's gland","type":"exact"},{"name":"cyst of Bartholin's gland duct","type":"exact"}],"termid":"MONDO:0004593","xrefs":{"Monarch":{"xref_id":"0004593"}}}


id: MONDO:1011149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Achondroplasia that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"achondroplasia, non-human animal","termid":"MONDO:1010291"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"achondroplasia, sheep","secondary_identifiers":["OMIA:000004-9940"],"termid":"MONDO:1011149","xrefs":{"Monarch":{"xref_id":"1011149"}}}


id: GO:1904547
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104208],"is_not":false,"summary":null,"term":"GO:1904547"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to glucose starvation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:21118717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to nutrient levels","termid":"GO:0032107"},{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"regulates","term_name":"cellular response to glucose starvation","termid":"GO:0042149"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to glucose starvation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1904547","terms_by_termid":{"GO:1904547":null}}


id: GO:0060369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the Fc receptor mediated stimulatory signaling pathway.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"is_a","term_name":"regulation of Fc receptor mediated stimulatory signaling pathway","termid":"GO:0060368"},{"relation_name":"positively_regulates","term_name":"Fc receptor mediated stimulatory signaling pathway","termid":"GO:0002431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of Fc receptor mediated stimulatory signaling pathway","synonyms":[{"name":"positive regulation of Fc receptor mediated stimulatory signalling pathway","type":"exact"}],"termid":"GO:0060369"}


id: MONDO:0020324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intravascular large B-cell lymphoma (IVLBCL) is a very rare form of diffuse large B-cell lymphoma characterized by the selective growth of lymphoma cells within the lumina of small blood vessels (especially the capillaries) that most often presents with a wide range of clinical manifestations (as potentially any tissue can be involved), with patients from Western countries more frequently manifesting with neurological and cutaneous symptoms while patients from Asian countries more frequently displaying hepatosplenomegaly and thrombocytopenia. IVLBCL is characterized by an absence of lymphadenopathy, an aggressive clinical course and a poor prognosis.","definition_xrefs":["Orphanet:98839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse large B-cell lymphoma","termid":"MONDO:0018905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"intravascular large B-cell lymphoma","secondary_identifiers":["MEDGEN:90821","ICDO:9712/3","MedDRA:10069643","icd11.foundation:952730197","SCTID:255102004","DOID:0081311","ICD9:202.80","UMLS:C0334660","GARD:19590","NCIT:C4342","ONCOTREE:IVBCL"],"synonyms":[{"name":"IVBCL","type":"related"},{"name":"Tappeiner-Pfleger disease","type":"exact"},{"name":"angioendotheliomatosis proliferans systemisata","type":"exact"},{"name":"angiotropic large cell lymphoma","type":"exact"},{"name":"angiotropic lymphoma","type":"exact"},{"name":"intravascular B-cell lymphoma","type":"exact"},{"name":"intravascular large B-cell lymphoma","type":"exact"},{"name":"intravascular lymphomatosis","type":"exact"},{"name":"malignant angioendotheliomatosis","type":"exact"}],"termid":"MONDO:0020324","xrefs":{"Monarch":{"xref_id":"0020324"}}}


id: MONDO:0957460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal perforation","termid":"MONDO:0006807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"spontaneous intestinal perforation","secondary_identifiers":["Orphanet:645793","MEDGEN:856598","UMLS:C3897004","icd11.foundation:1355081169"],"termid":"MONDO:0957460","xrefs":{"Monarch":{"xref_id":"0957460"}}}


id: GO:0002294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigenically naive CD4-positive, alpha-beta T cell acquires the specialized features of an effector, regulatory, or memory T cell as part of an immune response. Effector T cells include cells which provide T cell help or exhibit cytotoxicity towards other cells.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta T cell differentiation involved in immune response","termid":"GO:0002293"},{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell differentiation","termid":"GO:0043367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4-positive, alpha-beta T cell differentiation involved in immune response","synonyms":[{"name":"CD4-positive, alpha-beta T cell development involved in immune response","type":"related"},{"name":"CD4-positive, alpha-beta T cell differentiation during immune response","type":"related"},{"name":"CD4-positive, alpha-beta T lymphocyte differentiation during immune response","type":"related"},{"name":"CD4-positive, alpha-beta T-cell differentiation during immune response","type":"related"},{"name":"CD4-positive, alpha-beta T-lymphocyte differentiation during immune response","type":"related"}],"termid":"GO:0002294"}


id: PBO:0053635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 681","termid":"PBO:0053635"}


id: PR:Q9UUF2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A methionine--tRNA ligase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02850","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine--tRNA ligase, cytoplasmic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17A3.04c","secondary_identifiers":["UniProtKB:Q9UUF2"],"synonyms":[{"name":"MetRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-metG","type":"exact"},{"name":"methionyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUF2"}


id: PBO:0003450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-rRNA processing protein Esf1 (predicted)","termid":"PBO:0003450"}


id: GO:0050125
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-benzyloxycarbonylglycine + H2O + H+ = benzyl alcohol + CO2 + glycine.","definition_xrefs":["EC:3.5.1.58","RHEA:20900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N-benzyloxycarbonylglycine hydrolase activity","secondary_identifiers":["KEGG_REACTION:R02551","MetaCyc:N-BENZYLOXYCARBONYLGLYCINE-HYDROLASE-RXN"],"synonyms":[{"name":"N-benzyloxycarbonylglycine urethanehydrolase activity","type":"related"},{"name":"benzyloxycarbonylglycine hydrolase activity","type":"related"},{"name":"nalpha-benzyloxycarbonyl amino acid urethane hydrolase I","type":"related"},{"name":"nalpha-benzyloxycarbonyl amino acid urethane hydrolase activity","type":"related"},{"name":"nalpha-carbobenzoxyamino acid amidohydrolase activity","type":"related"}],"termid":"GO:0050125"}


id: PBO:0113363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that binds to the Rap1p C-terminus; inhibits MRX-dependent Tel1p activity by acting directly on Rad50p and discharging its activated ATP-bound state, thereby rendering the MRX complex incompetent for Tel1p activation; acts synergistically with Rif1p to help control telomere length, establish telomeric silencing; deletion results in telomere elongation; RIF2 has paralog ORC4 that arose from the whole genome duplication","termid":"PBO:0113363"}


id: SO:0001803
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript processing variant whereby polyadenylation of the encoded transcript is decreased with respect to the reference.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyadenylation_variant","termid":"SO:0001545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased_polyadenylation_variant","synonyms":[{"name":"decreased polyadenylation variant","type":"exact"}],"termid":"SO:0001803"}


id: GO:0036190
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole + O2 + reduced [NADPH--hemoprotein reductase] = H+ + H2O + indolin-2-one + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:31899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"indole-2-monooxygenase activity","secondary_identifiers":["EC:1.14.14.153","KEGG_REACTION:R07403"],"termid":"GO:0036190"}


id: GO:0035042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Replacement of sperm-specific chromosomal proteins with somatic histones, to allow the paternal genome to acquire a nucleosomal chromatin organization compatible with nuclear activity.","definition_xrefs":["GOC:bf","PMID:11735001"],"gene_count":0,"genotype_count":0,"name":"obsolete fertilization, exchange of chromosomal proteins (obsolete GO:0035042)","synonyms":[{"name":"sperm-specific histone exchange","type":"exact"},{"name":"sperm-specific histone replacement","type":"exact"}],"termid":"GO:0035042"}


id: MONDO:0022151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bone fracture","termid":"MONDO:0005315"},{"relation_name":"is_a","term_name":"developmental disability","termid":"MONDO:0005287"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chitty Hall Webb syndrome","secondary_identifiers":["MEDGEN:418975","MESH:C535929","SCTID:725103004","UMLS:C2931066"],"synonyms":[{"name":"bowed tibiae, radial anomalies, osteopenia, multiple fractures and developmental delay","type":"related"}],"termid":"MONDO:0022151","xrefs":{"Monarch":{"xref_id":"0022151"}}}


id: MONDO:0017227
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 1 autoimmune pancreatitis is a form of autoimmune pancreatitis seen in elderly males (>60 years) and presenting with abdominal pain, steatorrhea, obstructive jaundice and other organ (bile duct, kidneys and retroperitoneum) involvement. It is thought to be due to an immunoglobulin G4 (IgG4)-associated systemic disease.","definition_xrefs":["Orphanet:280302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic pancreatitis","termid":"MONDO:0005003"},{"relation_name":"is_a","term_name":"autoimmune pancreatitis","termid":"MONDO:0015175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"autoimmune pancreatitis type 1","secondary_identifiers":["MEDGEN:927912","PMID:25985088","SCTID:722872000","EFO:1000780","GARD:21076","UMLS:C4302243"],"synonyms":[{"name":"AIP type 1","type":"exact"},{"name":"IgG4-related pancreatitis","type":"exact"},{"name":"autoimmune pancreatitis type 1","type":"exact"},{"name":"lymphoplasmacytic sclerosing pancreatitis","type":"exact"}],"termid":"MONDO:0017227","xrefs":{"Monarch":{"xref_id":"0017227"}}}


id: PBO:0004893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial PPR repeat protein Ppr7","termid":"PBO:0004893"}


id: PBO:0076039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 36","termid":"PBO:0076039"}


id: PBO:0039404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase promoting complex subunit 5","termid":"PBO:0039404"}


id: GO:1901248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lung ciliated cell differentiation.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of lung ciliated cell differentiation","termid":"GO:1901246"},{"relation_name":"positively_regulates","term_name":"lung ciliated cell differentiation","termid":"GO:0061141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lung ciliated cell differentiation","synonyms":[{"name":"activation of lung ciliated cell differentiation","type":"narrow"},{"name":"up regulation of lung ciliated cell differentiation","type":"exact"},{"name":"up-regulation of lung ciliated cell differentiation","type":"exact"},{"name":"upregulation of lung ciliated cell differentiation","type":"exact"}],"termid":"GO:1901248"}


id: GO:0051073
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosylcobinamide-GDP + alpha-ribazole = GMP + adenosylcobalamin.","definition_xrefs":["EC:2.7.8.26","MetaCyc:COBALAMINSYN-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016780","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"adenosylcobinamide-GDP ribazoletransferase activity","secondary_identifiers":["RHEA:16049"],"synonyms":[{"name":"CobS","type":"related"},{"name":"adenosylcobinamide-GDP:alpha-ribazole ribazoletransferase activity","type":"related"},{"name":"cobalamin (5'-phosphate) synthase activity","type":"related"},{"name":"cobalamin synthase activity","type":"exact"},{"name":"cobalamin-5'-phosphate synthase activity","type":"related"}],"termid":"GO:0051073"}


id: MONDO:0957811
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Alport syndrome","termid":"MONDO:0018965"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Alport syndrome 3b, autosomal recessive","secondary_identifiers":["OMIM:620536","MEDGEN:1848447","UMLS:C5882699"],"termid":"MONDO:0957811","xrefs":{"Monarch":{"xref_id":"0957811"}}}


id: GO:1901837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of transcription of nuclear large rRNA transcript mediated by RNA polymerase I.","definition_xrefs":["GOC:TermGenie","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transcription by RNA polymerase I","termid":"GO:0016479"},{"relation_name":"is_a","term_name":"regulation of transcription of nucleolar large rRNA by RNA polymerase I","termid":"GO:1901836"},{"relation_name":"negatively_regulates","term_name":"nucleolar large rRNA transcription by RNA polymerase I","termid":"GO:0042790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0006355","GO:0010467"],"is_obsolete":false,"name":"negative regulation of transcription of nucleolar large rRNA by RNA polymerase I","synonyms":[{"name":"down regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter","type":"exact"},{"name":"down regulation of transcription of nuclear rRNA large Pol I transcript","type":"exact"},{"name":"down-regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter","type":"exact"},{"name":"down-regulation of transcription of nuclear rRNA large Pol I transcript","type":"exact"},{"name":"downregulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter","type":"exact"},{"name":"downregulation of transcription of nuclear rRNA large Pol I transcript","type":"exact"},{"name":"inhibition of transcription of nuclear large rRNA transcript from RNA polymerase I promoter","type":"narrow"},{"name":"inhibition of transcription of nuclear rRNA large Pol I transcript","type":"exact"},{"name":"negative regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter","type":"exact"},{"name":"negative regulation of transcription of nuclear rRNA large Pol I transcript","type":"exact"}],"termid":"GO:1901837"}


id: GO:0099528
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a neurotransmitter and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:fj","GOC:mah","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"neurotransmitter receptor activity","termid":"GO:0030594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled neurotransmitter receptor activity","synonyms":[{"name":"G-protein coupled neurotransmitter receptor activity","type":"exact"}],"termid":"GO:0099528"}


id: GO:0075269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of aecium development, a process in which a cuplike structure containing chains of aeciospores is formed.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of spore-bearing organ development","termid":"GO:0075261"},{"relation_name":"is_a","term_name":"regulation of aecium development","termid":"GO:0075268"},{"relation_name":"positively_regulates","term_name":"aecium development","termid":"GO:0075267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of aecium development","termid":"GO:0075269"}


id: PBO:0050355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 58","termid":"PBO:0050355"}


id: GO:0036056
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized cell-cell junction found between the cells of the excretory system, which provides a barrier for filtration of blood or hemolymph.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:sart","PMID:18971929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"filtration diaphragm","termid":"GO:0036056"}


id: PBO:0040466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP23 metallopeptidase and ATP synthase assembly factor homolog","termid":"PBO:0040466"}


id: MONDO:0022405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete retinal ciliopathy due to mutation in nephronophthisis gene (obsolete MONDO:0022405)","secondary_identifiers":["Orphanet:156180"],"termid":"MONDO:0022405","xrefs":{"Monarch":{"xref_id":"0022405"}}}


id: MONDO:0044349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of hemoglobinopathy that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemoglobinopathy","termid":"MONDO:0044348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"acquired hemoglobinopathy","secondary_identifiers":["UMLS:C1263995","SCTID:127039000","MEDGEN:688237"],"synonyms":[{"name":"acquired hemoglobinopathy","type":"exact"}],"termid":"MONDO:0044349","xrefs":{"Monarch":{"xref_id":"0044349"}}}


id: MONDO:0030705
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of the prostate gland caused by Trichomonas vaginalis.","definition_xrefs":["NCIT:C35176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trichomoniasis","termid":"MONDO:0002154"},{"relation_name":"is_a","term_name":"prostatitis","termid":"MONDO:0005280"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Trichomonas prostatitis","secondary_identifiers":["SCTID:71590000","MEDGEN:102261","ICD10CM:A59.02","UMLS:C0153315","ICD9:131.03"],"synonyms":[{"name":"Trichomonas prostatitis","type":"exact"},{"name":"Trichomonas vaginalis caused prostatitis (disease)","type":"exact"},{"name":"Trichomonas vaginalis prostatitis (disease)","type":"exact"},{"name":"trichomonal prostatitis","type":"exact"}],"termid":"MONDO:0030705","xrefs":{"Monarch":{"xref_id":"0030705"}}}


id: GO:1905221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of platelet formation.","definition_xrefs":["GOC:TermGenie","PMID:10606160","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell morphogenesis","termid":"GO:0010770"},{"relation_name":"is_a","term_name":"positive regulation of myeloid cell differentiation","termid":"GO:0045639"},{"relation_name":"is_a","term_name":"regulation of platelet formation","termid":"GO:1905219"},{"relation_name":"positively_regulates","term_name":"platelet formation","termid":"GO:0030220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of platelet formation","synonyms":[{"name":"activation of platelet extrusion","type":"narrow"},{"name":"activation of platelet formation","type":"narrow"},{"name":"positive regulation of platelet extrusion","type":"exact"},{"name":"up regulation of platelet extrusion","type":"exact"},{"name":"up regulation of platelet formation","type":"exact"},{"name":"up-regulation of platelet extrusion","type":"exact"},{"name":"up-regulation of platelet formation","type":"exact"},{"name":"upregulation of platelet extrusion","type":"exact"},{"name":"upregulation of platelet formation","type":"exact"}],"termid":"GO:1905221"}


id: PBO:0061025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein interacting with the FHA domain of MKI67 pseudogene 8","termid":"PBO:0061025"}


id: GO:2000608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell proliferation involved in mesonephros development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell proliferation involved in kidney development","termid":"GO:1901724"},{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in mesonephros development","termid":"GO:2000606"},{"relation_name":"positively_regulates","term_name":"cell proliferation involved in mesonephros development","termid":"GO:0061209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell proliferation involved in mesonephros development","termid":"GO:2000608"}


id: GO:0014060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of epinephrine.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catecholamine secretion","termid":"GO:0050433"},{"relation_name":"regulates","term_name":"epinephrine secretion","termid":"GO:0048242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of epinephrine secretion","synonyms":[{"name":"regulation of adrenaline secretion","type":"exact"}],"termid":"GO:0014060"}


id: GO:0150074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein-glutamine gamma-glutamyltransferase activity.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:26670206"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transferase activity","termid":"GO:0051347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein-glutamine gamma-glutamyltransferase activity","termid":"GO:0150074"}


id: GO:0044105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: xylitol + NAD+ = L-xylulose + NADH + H+.","definition_xrefs":["PMID:14736891","RHEA:68100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"L-xylulose reductase (NADH) activity","secondary_identifiers":["MetaCyc:RXN-11825"],"termid":"GO:0044105"}


id: GO:1901925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the movement of proteins from the cytoplasm into the nucleus, and that occurs as a response to the mitotic cell cycle spindle assembly checkpoint. In S. cerevisiae, this process involves inhibition of the karyopherin/importin Kap121p (also known as Pse1p), which acts as the specific nuclear import receptor for several proteins, including Glc7p. Glc7p functions in opposition to key spindle assembly checkpoint protein Aurora kinase (Ipl1p).","definition_xrefs":["GOC:dgf","GOC:TermGenie","PMID:23177738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mitotic cell cycle spindle assembly checkpoint signaling","termid":"GO:0072479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein import into nucleus during spindle assembly checkpoint","synonyms":[{"name":"KTIP","type":"related"},{"name":"Kap121p transport inhibitory pathway","type":"related"},{"name":"negative regulation of protein import into nucleus during mitotic cell cycle spindle assembly checkpoint","type":"exact"}],"termid":"GO:1901925"}


id: MONDO:1010079
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Prekallikrein deficiency that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prekallikrein deficiency, non-human animal","secondary_identifiers":["OMIA:000819"],"termid":"MONDO:1010079","xrefs":{"Monarch":{"xref_id":"1010079"}}}


id: PBO:0065221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRR3 pseudogene 1","termid":"PBO:0065221"}


id: GO:1901702
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of salt from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"salt transmembrane transporter activity","termid":"GO:1901702"}


id: GO:0031578
data:
  {"annotated_genes":["SJAG_04943"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80673],"is_not":false,"summary":null,"term":"GO:0031578"}]},"cv_name":"biological_process","definition":"A signaling process that monitors and signals errors in the placement or orientation of the spindle in the cell. This delays the completion of anaphase until errors are corrected.","definition_xrefs":["GOC:mtg_cell_cycle","PMID:14616062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of exit from mitosis","termid":"GO:0001100"},{"relation_name":"is_a","term_name":"mitotic spindle checkpoint signaling","termid":"GO:0071174"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04943":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0007049","GO:0044772"],"is_obsolete":false,"name":"mitotic spindle orientation checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0072483"],"synonyms":[{"name":"SOC","type":"exact"},{"name":"SPOC","type":"exact"},{"name":"mitotic cell cycle spindle orientation checkpoint","type":"exact"},{"name":"mitotic spindle orientation checkpoint","type":"exact"},{"name":"signal transduction involved in mitotic cell cycle spindle orientation checkpoint","type":"exact"},{"name":"spindle position checkpoint","type":"exact"}],"termid":"GO:0031578","terms_by_termid":{"GO:0031578":null}}


id: PBO:0003810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex phosphatidylinositol pseudokinase Tra1","termid":"PBO:0003810"}


id: PR:O74479
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP synthase subunit O, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO05006","PANTHER:PTHR11910:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit 5, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1840.06","secondary_identifiers":["UniProtKB:O74479"],"synonyms":[{"name":"ATP synthase chain 5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"OSCP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ATP5O","type":"exact"},{"name":"oligomycin sensitivity conferral protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74479"}


id: GO:0120133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the assembly of actin cortical patches.","definition_xrefs":["PMID:19962315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin cytoskeleton organization","termid":"GO:0032956"},{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"negatively_regulates","term_name":"actin cortical patch assembly","termid":"GO:0000147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0030036"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0044085","GO:0007010","GO:0030036","GO:0008150"],"is_obsolete":false,"name":"negative regulation of actin cortical patch assembly","synonyms":[{"name":"down regulation of actin cortical patch assembly","type":"exact"},{"name":"down-regulation of actin cortical patch assembly","type":"exact"},{"name":"downregulation of actin cortical patch assembly","type":"exact"},{"name":"inhibition of actin cortical patch assembly","type":"narrow"}],"termid":"GO:0120133"}


id: PR:O94340
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1271.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized N-acetyltransferase C1271.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1271.07c","synonyms":[{"name":"Spom972h-SPBC1271.07c","type":"exact"}],"termid":"PR:O94340"}


id: MONDO:0001826
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypobetalipoproteinemia (obsolete MONDO:0001826)","termid":"MONDO:0001826","xrefs":{"Monarch":{"xref_id":"0001826"}}}


id: MONDO:0002908
data:
  {"annotated_genes":["SJAG_04495","SJAG_00464","SJAG_02013","SJAG_04334","SJAG_04394","SJAG_04206","SJAG_00092","SJAG_00214","SJAG_02426","SJAG_03247","SJAG_02012","SJAG_02000","SJAG_03266","SJAG_04192"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89160,89161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014488"},{"annotations":[88280,88281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011236"},{"annotations":[88617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011717"},{"annotations":[89082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014674"},{"annotations":[86923,86924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007453"},{"annotations":[88200,88201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100165"},{"annotations":[87547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009949"},{"annotations":[87575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014221"},{"annotations":[89084,86919,86918,89085,86920,86922,86921,89086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0005148"}]},"cv_name":"mondo","definition":"A metabolic disorder characterized by abnormal blood glucose levels.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00092":null,"SJAG_00214":null,"SJAG_00464":null,"SJAG_02000":null,"SJAG_02012":null,"SJAG_02013":null,"SJAG_02426":null,"SJAG_03247":null,"SJAG_03266":null,"SJAG_04192":null,"SJAG_04206":null,"SJAG_04334":null,"SJAG_04394":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"glucose metabolism disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0009406","MEDGEN:226229","DOID:4194","MESH:D044882","UMLS:C1257958","ICD9:271.8","NCIT:C53655","SCTID:126877002"],"synonyms":[{"name":"disorder of glucose metabolism","type":"exact"},{"name":"glucose metabolism disorder","type":"exact"}],"termid":"MONDO:0002908","terms_by_termid":{"MONDO:0005148":null,"MONDO:0007453":null,"MONDO:0009949":null,"MONDO:0011236":null,"MONDO:0011717":null,"MONDO:0014221":null,"MONDO:0014488":null,"MONDO:0014674":null,"MONDO:0100165":null},"xrefs":{"Monarch":{"xref_id":"0002908"}}}


id: GO:0007273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of synapse (obsolete GO:0007273)","synonyms":[{"name":"regulation of synapse","type":"exact"}],"termid":"GO:0007273"}


id: PBO:0070292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 33","termid":"PBO:0070292"}


id: PBO:0054444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1841","termid":"PBO:0054444"}


id: PBO:0045097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLX6 antisense RNA 2","termid":"PBO:0045097"}


id: PBO:0113505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase; produces two isoforms based on alternative translational starts; localizes to the nucleus and mitochondrion, producing N2,N2-dimethylguanosine in tRNAs; involved in the methylation of guanosine and uridine ribonucleosides in mRNA; nuclear Trm1p is evenly distributed around the inner nuclear membrane in WT, but mislocalizes as puncta near ER-nucleus junctions in spindle pole body mutants; both Trm1p inner nuclear membrane targeting and maintenance depend upon the SPB","termid":"PBO:0113505"}


id: MONDO:0003465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"synovial sarcoma","termid":"MONDO:0010434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"fibrous synovial sarcoma","secondary_identifiers":["DOID:5484","MEDGEN:234267","UMLS:C1333616","NCIT:C6533"],"synonyms":[{"name":"fibrous sarcoma of synovium","type":"exact"},{"name":"fibrous sarcoma of the synovium","type":"exact"}],"termid":"MONDO:0003465","xrefs":{"Monarch":{"xref_id":"0003465"}}}


id: PBO:0081775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 705C, pseudogene","termid":"PBO:0081775"}


id: PBO:0055319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2747","termid":"PBO:0055319"}


id: PBO:0071964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase A3","termid":"PBO:0071964"}


id: GO:0004240
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of N-terminal transit peptides from precursor proteins imported into the mitochondrion, typically with Arg in position P2.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial processing peptidase activity (obsolete GO:0004240)","synonyms":[{"name":"MPP","type":"exact"},{"name":"alpha-mitochondrial processing peptidase","type":"narrow"},{"name":"beta-mitochondrial processing peptidase","type":"narrow"},{"name":"matrix peptidase","type":"related"},{"name":"matrix processing peptidase","type":"related"},{"name":"matrix processing proteinase","type":"related"},{"name":"mitochondrial processing peptidase activity","type":"exact"},{"name":"mitochondrial protein precursor-processing proteinase activity","type":"related"},{"name":"processing enhancing peptidase (for one of two subunits)","type":"related"},{"name":"processing enhancing peptidase activity","type":"narrow"}],"termid":"GO:0004240"}


id: PBO:0065070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRICKLE1 pseudogene 1","termid":"PBO:0065070"}


id: MONDO:0015890
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare disorder with congenital hypogonadotropic hypogonadism (obsolete MONDO:0015890)","secondary_identifiers":["Orphanet:181387"],"synonyms":[{"name":"rare disorder with hypogonadotropic hypogonadism","type":"related"},{"name":"rare disorder with secondary hypogonadism","type":"exact"}],"termid":"MONDO:0015890","xrefs":{"Monarch":{"xref_id":"0015890"}}}


id: PBO:0030952
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_acetylation_at_centromere","termid":"PBO:0030952"}


id: PBO:0090648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERAD E3 ligase adaptor subunit Hrd3","termid":"PBO:0090648"}


id: PBO:0089911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin-6 ATPase subunit","termid":"PBO:0089911"}


id: PBO:0017749
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta 3'-5' exonuclease-to-polymerase ratio is about 1:30","termid":"PBO:0017749"}


id: FYPO:0005030
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which more ribonucleotides than normal are incorporated into the leading strand during mitotic DNA replication.","definition_xrefs":["PomBase:mah","PMID:25664722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased ribonucleotide incorporation into DNA","termid":"FYPO:0007680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0001320","FYPO:0005447","FYPO:0000293"],"is_obsolete":false,"name":"increased ribonucleotide incorporation on leading strand","synonyms":[{"name":"increased rNMP incorporation on leading strand","type":"related"},{"name":"increased rNTP incorporation on leading strand","type":"related"},{"name":"increased ribonucleotide residue incorporation on leading strand","type":"exact"}],"termid":"FYPO:0005030"}


id: MONDO:0800343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rhegmatogenous retinal detachment, autosomal dominant (obsolete MONDO:0800343)","termid":"MONDO:0800343","xrefs":{"Monarch":{"xref_id":"0800343"}}}


id: PBO:0050842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin binding sialoprotein","termid":"PBO:0050842"}


id: MONDO:0010029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital condition in which there is complete right-to-left reversal of the position of the major thoracic and abdominal organs (that is, they are arranged in a mirror image of the normal positioning).","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visceral heterotaxy","termid":"MONDO:0018677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"situs inversus","secondary_identifiers":["Orphanet:101063","DOID:758","ICD9:759.3","GARD:4883","HP:0001696","SCTID:24614000","UMLS:C4551493","ICD10CM:Q89.3","icd11.foundation:797648408","ICD9:759.89","MEDGEN:1642262","NCIT:C87121","MESH:D012857"],"synonyms":[{"name":"complete situs inversus","type":"exact"},{"name":"complete situs inversus viscerum","type":"exact"},{"name":"complete transposition (morphologic abnormality)","type":"exact"},{"name":"laterality sequence","type":"exact"},{"name":"situs ambiguus","type":"related"},{"name":"situs inversus","type":"exact"},{"name":"situs inversus totalis","type":"exact"},{"name":"situs inversus totalis (disease)","type":"exact"}],"termid":"MONDO:0010029","xrefs":{"Monarch":{"xref_id":"0010029"}}}


id: MONDO:0010738
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spondylometaphyseal dysplasia, Golden type is a rare primary bone dysplasia disorder characterized by severe short stature, coarse facies, thoracolumbar kyphoscoliosis and enlarged joints with contractures. Psychomotor delay and intellectual disability may also be associated. Radiographic features include flat vertebral bodies, lacy ossification of the metaphyses of long bones and iliac crests, and marked sclerosis of the skull base.","definition_xrefs":["Orphanet:168544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondylometaphyseal dysplasia","termid":"MONDO:0016763"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondylometaphyseal dysplasia, Golden type","secondary_identifiers":["MEDGEN:208672","OMIM:313420","GARD:8343","UMLS:C0796172","icd11.foundation:840695879","MESH:C563124"],"synonyms":[{"name":"X-linked spondylometaphyseal dysplasia","type":"exact"},{"name":"spondylometaphyseal dysplasia Richmond type","type":"related"},{"name":"spondylometaphyseal dysplasia X-linked","type":"related"},{"name":"spondylometaphyseal dysplasia, Richmond type","type":"related"},{"name":"spondylometaphyseal dysplasia, X-linked","type":"related"}],"termid":"MONDO:0010738","xrefs":{"Monarch":{"xref_id":"0010738"}}}


id: PBO:0085494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protease that specifically cleaves Smt3p protein conjugates; required for cell cycle progression; associates with nucleoporins and may interact with septin rings during telophase; contributes to regulation of telomeric silencing; sequestered to the nucleolus under stress conditions","termid":"PBO:0085494"}


id: PBO:0052535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein related peptidase 8","termid":"PBO:0052535"}


id: PBO:0112858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pombephosphoproteomics_unige_ch_gene","termid":"PBO:0112858"}


id: GO:0045512
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-26.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"interleukin-26 binding","synonyms":[{"name":"IL-26 binding","type":"exact"}],"termid":"GO:0045512"}


id: MONDO:0009199
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethanolaminosis","secondary_identifiers":["SCTID:64235006","ICD9:270.8","MEDGEN:120637","UMLS:C0268423","OMIM:227150","MESH:C562651"],"synonyms":[{"name":"ethanolamine kinase deficiency","type":"related"},{"name":"ethanolaminosis","type":"exact"}],"termid":"MONDO:0009199","xrefs":{"Monarch":{"xref_id":"0009199"}}}


id: PBO:0075946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stromal antigen 3-like 1 (pseudogene)","termid":"PBO:0075946"}


id: GO:0071502
data:
  {"annotated_genes":["SJAG_02381"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92622],"is_not":false,"summary":null,"term":"GO:0071502"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a temperature stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to temperature stimulus","termid":"GO:0009266"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02381":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to temperature stimulus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular response to thermal stimulus","type":"exact"}],"termid":"GO:0071502","terms_by_termid":{"GO:0071502":null}}


id: MONDO:0016418
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple system atrophy, cerebellar type (MSA-c) is a form of multiple system atrophy (MSA) with predominant cerebellar features (gait and limb ataxia, oculomotor dysfunction, and dysarthria).","definition_xrefs":["Orphanet:227510"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete non-hereditary degenerative ataxia (obsolete MONDO:0016592)","termid":"MONDO:0016592"},{"relation_name":"is_a","term_name":"multiple system atrophy","termid":"MONDO:0007803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005559","MONDO:0021179"],"is_obsolete":false,"name":"multiple system atrophy, cerebellar type","secondary_identifiers":["GARD:20565","NANDO:1200035","MEDGEN:1843304","icd11.foundation:1585600114","UMLS:C5554234"],"synonyms":[{"name":"MSA, cerebellar type","type":"exact"},{"name":"MSA-c","type":"exact"},{"name":"sporadic OPCA type 1","type":"exact"},{"name":"sporadic olivopontocerebellar atrophy type 1","type":"exact"}],"termid":"MONDO:0016418","xrefs":{"Monarch":{"xref_id":"0016418"}}}


id: PBO:0067013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 22, pseudogene","termid":"PBO:0067013"}


id: PBO:0113090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic and mitochondrial glutathione oxidoreductase; converts oxidized glutathione to reduced glutathione; cytosolic Glr1p is the main determinant of the glutathione redox state of the mitochondrial intermembrane space; mitochondrial Glr1p has a role in resistance to hyperoxia; also detected in peroxisomes; protein abundance increases in response to DNA replication stress","termid":"PBO:0113090"}


id: PBO:0072618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSPH1 divergent transcript","termid":"PBO:0072618"}


id: PBO:0052619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRIT1 ankyrin repeat containing","termid":"PBO:0052619"}


id: MOD:01800
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an L-serine alpha amino hydrogen with a methyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino methylated residue","termid":"MOD:01460"},{"relation_name":"is_a","term_name":"methylated serine","termid":"MOD:01799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methylated serine","termid":"MOD:01800"}


id: PBO:0052214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel modifier subfamily S member 1","termid":"PBO:0052214"}


id: PBO:0058199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4492","termid":"PBO:0058199"}


id: MONDO:0850109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"non-specific autoimmune cerebellar ataxia without characteristic antibodies","secondary_identifiers":["MEDGEN:1843044","Orphanet:624268","GARD:22504","UMLS:C5576703"],"termid":"MONDO:0850109","xrefs":{"Monarch":{"xref_id":"0850109"}}}


id: PBO:0040554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7","termid":"PBO:0040554"}


id: PBO:0012565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-azetidine-2-carboxylic acid acetyltransferase Aca1","termid":"PBO:0012565"}


id: PBO:0039704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apelin","termid":"PBO:0039704"}


id: PBO:0075629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small proline rich protein 1A","termid":"PBO:0075629"}


id: GO:0005888
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Penetrating at least one phospholipid bilayer of a plasma membrane and consisting of proteoglycan. Also refers to the state of being buried in the bilayer with no exposure outside the bilayer.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete proteoglycan integral to plasma membrane (obsolete GO:0005888)","synonyms":[{"name":"proteoglycan integral to plasma membrane","type":"exact"}],"termid":"GO:0005888"}


id: PBO:0027791
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_phosphate_starvation","termid":"PBO:0027791"}


id: GO:0061974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which bones are generated and organized as a result of the conversion of initial connective tissue surrounding cartilage into bone.","definition_xrefs":["PMID:21901110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane bone morphogenesis","termid":"GO:0061973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"perichondral bone morphogenesis","termid":"GO:0061974"}


id: PATO:0002508
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer being hidden from view.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"concealed","termid":"PATO:0002508"}


id: PBO:0042710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CELSR1 pseudogene 1","termid":"PBO:0042710"}


id: PBO:0048257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosylceramidase","termid":"PBO:0048257"}


id: PBO:0073073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndecan binding protein pseudogene 2","termid":"PBO:0073073"}


id: MOD:01996
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an butanoyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butanoylated residue","synonyms":[{"name":"ButRes","type":"exact"},{"name":"Butyryl","type":"related"},{"name":"butyrylation","type":"exact"}],"termid":"MOD:01996"}


id: GO:0003732
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting selectively with the cap structure at the 5' end of a small nuclear RNA molecule.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete snRNA cap binding (obsolete GO:0003732)","synonyms":[{"name":"snRNA cap binding","type":"exact"}],"termid":"GO:0003732"}


id: SO:1000118
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000118 sequence_variant_causing_loss_of_function_of_polypeptide (obsolete SO:1000118)","synonyms":[{"name":"loss of function of polypeptide","type":"related"},{"name":"mutation causing loss of function of polypeptide","type":"related"},{"name":"sequence variant causing loss of function of polypeptide","type":"exact"}],"termid":"SO:1000118"}


id: PBO:0028575
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_amino_acid_import_during_vegetative_growth","termid":"PBO:0028575"}


id: GO:0022024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to a receptor on the surface of a target cell, which contributes to the commitment of a neuroblast to a neuronal fate. The neuron will reside in the forebrain.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:cls","GOC:jid","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete BMP signaling pathway involved in forebrain neuron fate commitment (obsolete GO:0022024)","synonyms":[{"name":"BMP signalling pathway involved in forebrain neuron fate commitment","type":"exact"},{"name":"bone morphogenetic protein signaling pathway involved in forebrain neuron fate commitment","type":"exact"},{"name":"bone morphogenetic protein signalling pathway involved in forebrain neuron fate commitment","type":"exact"}],"termid":"GO:0022024"}


id: PBO:0002031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp7 (predicted)","termid":"PBO:0002031"}


id: PBO:0044981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DHX33 divergent transcript","termid":"PBO:0044981"}


id: FYPO:0005192
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A stress response phenotype in which the response to nitrogen starvation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to stress","termid":"FYPO:0005191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular response to nitrogen starvation","synonyms":[{"name":"normal cellular response to nitrogen depletion","type":"exact"},{"name":"normal cellular response to nitrogen deprivation","type":"exact"}],"termid":"FYPO:0005192"}


id: PBO:0061703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUS1 pseudogene 3","termid":"PBO:0061703"}


id: FYPO:0007181
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the site of cell division is normal (i.e. indistinguishable from wild type) during anaphase of mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell division site","termid":"FYPO:0002442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to cell division site during mitotic anaphase","synonyms":[{"name":"normal protein localisation to cell division site during mitotic anaphase","type":"exact"},{"name":"normal protein localization to cell division site during anaphase of mitotic cell cycle","type":"exact"},{"name":"normal protein recruitment to cell division site during mitotic anaphase","type":"related"}],"termid":"FYPO:0007181"}


id: PBO:0092025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S3","termid":"PBO:0092025"}


id: PBO:0050824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HYDIN axonemal central pair apparatus protein 2 (pseudogene)","termid":"PBO:0050824"}


id: PBO:0054627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2032","termid":"PBO:0054627"}


id: GO:0002351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis or release of serotonin following a stimulus as part of an inflammatory response, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["ISBN:0781735149","PMID:16730260","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator involved in inflammatory response","termid":"GO:0002532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"serotonin production involved in inflammatory response","synonyms":[{"name":"serotonin production involved in acute inflammatory response","type":"broad"}],"termid":"GO:0002351"}


id: PBO:0082457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-8 sterol isomerase; catalyzes isomerization of delta-8 double bond to delta-7 position at an intermediate step in ergosterol biosynthesis; transcriptionally down-regulated when ergosterol is in excess; mutation is functionally complemented by human EBP","termid":"PBO:0082457"}


id: GO:0090283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency, or extent of the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid in any compartment of the Golgi apparatus.","definition_xrefs":["GOC:pr","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of protein glycosylation in Golgi (obsolete GO:0090283)","synonyms":[{"name":"regulation of protein amino acid glycosylation in Golgi","type":"exact"}],"termid":"GO:0090283"}


id: PBO:0083679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endosomal protein that forms a complex with Hse1p; required for recycling Golgi proteins, forming lumenal membranes and sorting ubiquitinated proteins destined for degradation; has Ubiquitin Interaction Motifs which bind ubiquitin (Ubi4p)","termid":"PBO:0083679"}


id: PBO:0063781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 6","termid":"PBO:0063781"}


id: PBO:0034235
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-involved_in_positive_regulation_of","termid":"PBO:0034235"}


id: PBO:0005364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Ucp12 (predicted)","termid":"PBO:0005364"}


id: PBO:0085331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol transfer protein (PITP); controlled by the multiple drug resistance regulator Pdr1p; localizes to lipid particles and microsomes; controls levels of various lipids, may regulate lipid synthesis; homologous to Pdr17p; protein abundance increases in response to DNA replication stress","termid":"PBO:0085331"}


id: PBO:0040087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase G","termid":"PBO:0040087"}


id: MONDO:0004419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"infiltrating bladder urothelial carcinoma","termid":"MONDO:0003890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lymphoma-like variant infiltrating bladder urothelial carcinoma","secondary_identifiers":["DOID:7972","NCIT:C39822"],"synonyms":[{"name":"infiltrating bladder urothelial carcinoma, lymphoma-like variant","type":"exact"}],"termid":"MONDO:0004419","xrefs":{"Monarch":{"xref_id":"0004419"}}}


id: GO:2000229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pancreatic stellate cell proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fibroblast proliferation","termid":"GO:0048145"},{"relation_name":"regulates","term_name":"pancreatic stellate cell proliferation","termid":"GO:0072343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pancreatic stellate cell proliferation","termid":"GO:2000229"}


id: PBO:0049535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.Z histone pseudogene 6","termid":"PBO:0049535"}


id: MONDO:0017999
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fatty acid hydroxylase-associated neurodegeneration (FAHN) is a very rare, autosomal recessive form of neurodegeneration with brain iron accumulation (NBIA) characterized by childhood-onset focal dystonia, progressive spastic paraplegia that progresses to tetra paresis, ataxia, dysarthria, intellectual decline, and oculomotor disturbances (optic atrophy), accompanied by iron deposition in the globus pallidus.","definition_xrefs":["Orphanet:329308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"},{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"},{"relation_name":"is_a","term_name":"disorder of phospholipids, sphingolipids and fatty acids biosynthesis","termid":"MONDO:0018117"},{"relation_name":"is_a","term_name":"neurodegeneration with brain iron accumulation","termid":"MONDO:0018307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002525","MONDO:0005066","MONDO:0002039"],"is_obsolete":false,"name":"fatty acid hydroxylase-associated neurodegeneration","secondary_identifiers":["GARD:10810","NANDO:1200541","MESH:C580102","MEDGEN:777150","UMLS:C3668943"],"synonyms":[{"name":"FAHN","type":"exact"}],"termid":"MONDO:0017999","xrefs":{"Monarch":{"xref_id":"0017999"}}}


id: MONDO:0700267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary cancer predisposition due to variation(s) in the BARD1 gene. Germline pathogenic or likely pathogenic variants in the BARD1 gene confer a moderate risk of breast cancer, inherited in an autosomal dominant pattern, increasingly documented to be specific to triple negative breast cancer in women. BARD1 cancer susceptibility syndrome is also associated with other tumour types including neuroblastoma.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BARD1-related cancer predisposition","termid":"MONDO:0700267","xrefs":{"Monarch":{"xref_id":"0700267"}}}


id: PBO:0050385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3 pseudogene 9","termid":"PBO:0050385"}


id: PBO:0061603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUBPL divergent transcript","termid":"PBO:0061603"}


id: PBO:0077646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF alpha induced protein 3","termid":"PBO:0077646"}


id: PBO:0061379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 39","termid":"PBO:0061379"}


id: GO:0061100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuroendocrine cell of the lung epithelium.","definition_xrefs":["GOC:dph","PMID:9126746"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroendocrine cell differentiation","termid":"GO:0061101"},{"relation_name":"is_a","term_name":"lung secretory cell differentiation","termid":"GO:0061140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung neuroendocrine cell differentiation","termid":"GO:0061100"}


id: MONDO:0019999
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete intestinal malformation (obsolete MONDO:0019999)","secondary_identifiers":["Orphanet:97945"],"termid":"MONDO:0019999","xrefs":{"Monarch":{"xref_id":"0019999"}}}


id: PATO:0001724
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A female receptivity which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"female receptivity","termid":"PATO:0001720"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased female receptivity","synonyms":[{"name":"low female receptivity","type":"exact"}],"termid":"PATO:0001724"}


id: GO:0140766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A post-transcriptional gene silencing pathway in which small interfering RNAs (siRNAs) elicit silencing of specific target genes. siRNAs are 21-23 nucleotide RNA duplexes that are fully complementary to their target mRNA. siRNAs can be exported and act in other cells, including in germline cells. Once incorporated into a RNA-induced silencing complex (RISC), siRNAs can downregulate gene expression by either of two posttranscriptional mechanisms: endonucleolytic cleavage of the mRNA or mRNA translational repression. siRNAs are present in lower animals and plants, but not found in mammals; whereas miRNAs are present in all the animals and in plants.","definition_xrefs":["PMID:26372022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory ncRNA-mediated post-transcriptional gene silencing","termid":"GO:0035194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"siRNA-mediated post-transcriptional gene silencing","synonyms":[{"name":"gene silencing by siRNA","type":"exact"},{"name":"post-transcriptional gene silencing by siRNA","type":"exact"},{"name":"posttranscriptional gene silencing by siRNA","type":"exact"},{"name":"siRNA-mediated PTGS","type":"exact"},{"name":"siRNA-mediated gene silencing","type":"broad"}],"termid":"GO:0140766"}


id: MONDO:1012539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypomyelinating leukodystrophy, non-human animal","termid":"MONDO:1011898"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypomyelinating leukodystrophy, dog","secondary_identifiers":["OMIA:002321-9615"],"termid":"MONDO:1012539","xrefs":{"Monarch":{"xref_id":"1012539"}}}


id: PBO:0047160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 186 member B","termid":"PBO:0047160"}


id: MONDO:0016065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft palate- short stature- vertebral anomalies is a multiple congenital anomalies syndrome described in a father and son characterized by the association of cleft palate, peculiar facies (asymmetrical appearance, inner epicanthal folds, short nose, anteverted nostrils, low and back-oriented ears, thin upper lip and micrognathism), short stature, short neck, vertebral anomalies and intellectual disability. The transmission is presumed to be autosomal dominant. There have been no further descriptions in the literature since 1993.","definition_xrefs":["Orphanet:2015"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate-short stature-vertebral anomalies syndrome","secondary_identifiers":["GARD:1392","MEDGEN:930373","SCTID:719466009","UMLS:C4304704"],"synonyms":[{"name":"Mathieu-De Broca-Bony syndrome","type":"exact"},{"name":"cleft palate short stature vertebral anomalies","type":"related"}],"termid":"MONDO:0016065","xrefs":{"Monarch":{"xref_id":"0016065"}}}


id: PBO:0029323
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H2A_phosphorylation_at_rDNA_during_mitotic_S_phase","termid":"PBO:0029323"}


id: GO:0070489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The adhesion of one T cell to one or more other T cells via adhesion molecules.","definition_xrefs":["PMID:12972508","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte aggregation","termid":"GO:0071593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"T cell aggregation","synonyms":[{"name":"T lymphocyte aggregation","type":"exact"},{"name":"T-cell aggregation","type":"exact"},{"name":"T-lymphocyte aggregation","type":"exact"}],"termid":"GO:0070489"}


id: GO:1990005
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic membrane-bounded vesicle of varying size, but usually larger than 45 nm, with an electron dense granular core, found in noradrenergic and peptidergic cells.","definition_xrefs":["NIF_Subcellular:sao478230652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"granular vesicle","termid":"GO:1990005"}


id: PBO:0087053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L25; primary rRNA-binding ribosomal protein component of large ribosomal subunit; binds to 25S rRNA via a conserved C-terminal motif; homologous to mammalian ribosomal protein L23A and bacterial L23","termid":"PBO:0087053"}


id: FYPO:0000595
data:
  {"alleles_by_uniquename":{"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121421],"is_not":false,"summary":null,"term":"FYPO:0000595"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of transposition is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transposition","termid":"FYPO:0000591"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":1,"genotypes_by_uniquename":{"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased rate of transposition","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"increased rate of transposable element transposition","type":"exact"},{"name":"increased rate of transposition during mitotic cell cycle","type":"related"},{"name":"increased rate of transposition during vegetative growth","type":"exact"},{"name":"transposable element transposition: increased rate","type":"related"}],"termid":"FYPO:0000595","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0000595":null,"FYPO_EXT:0000001":null}}


id: PBO:0035727
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_replication_fork_pausing","termid":"PBO:0035727"}


id: PBO:0055958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 72","termid":"PBO:0055958"}


id: PBO:0082920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytochrome c, isoform 1; also known as iso-1-cytochrome c; electron carrier of mitochondrial intermembrane space that transfers electrons from ubiquinone-cytochrome c oxidoreductase to cytochrome c oxidase during cellular respiration; CYC1 has a paralog, CYC7, that arose from the whole genome duplication; human homolog CYC1 can complement yeast null mutant; mutations in human CYC1 cause insulin-responsive hyperglycemia","termid":"PBO:0082920"}


id: PBO:0079153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 13","termid":"PBO:0079153"}


id: PBO:0017766
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M Twenty Six binding protein","termid":"PBO:0017766"}


id: PBO:0011493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Centaurin Cnt5","termid":"PBO:0011493"}


id: PBO:0028356
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_phosphatase_activity","termid":"PBO:0028356"}


id: MONDO:0005331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acrocephalosyndactylia (obsolete MONDO:0005331)","termid":"MONDO:0005331","xrefs":{"Monarch":{"xref_id":"0005331"}}}


id: GO:0006598
data:
  {"annotated_genes":["SJAG_03288"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009447"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of polyamines, any organic compound containing two or more amino groups.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine metabolic process","termid":"GO:0006595"},{"relation_name":"is_a","term_name":"biogenic amine catabolic process","termid":"GO:0042402"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polyamine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"polyamine breakdown","type":"exact"},{"name":"polyamine catabolism","type":"exact"},{"name":"polyamine degradation","type":"exact"}],"termid":"GO:0006598","terms_by_termid":{"GO:0009447":null}}


id: GO:0102390
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: mycophenolic acid O-acyl-glucuronide(1-) + H2O = mycophenolate + H+ + D-glucopyranuronate.","definition_xrefs":["GOC:pz","EC:3.1.1.93"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"mycophenolic acid acyl-glucuronide esterase activity","secondary_identifiers":["RHEA:34179","MetaCyc:RXN-13605"],"termid":"GO:0102390"}


id: FYPO:0002566
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000458"},{"relation_name":"is_a","term_name":"abolished histone methylation during vegetative growth","termid":"FYPO:0002565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0002494","FYPO:0001320","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"abolished histone H3-K9 methylation during vegetative growth","synonyms":[{"name":"abolished histone H3 K9 methylation during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 methylation during mitotic cell cycle","type":"related"},{"name":"abolished histone H3K9me during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K9 methylation during vegetative growth","type":"exact"},{"name":"histone H3-K9 methylation abolished during vegetative growth","type":"exact"},{"name":"histone H3-K9 methylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0002566"}


id: PBO:0113275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane arginine permease; transceptor that senses extracellular basic amino acids; negative regulator of biofilm formation; requires phosphatidyl ethanolamine (PE) for localization, exclusively associated with lipid rafts; mutation confers canavanine resistance; CAN1 has a paralog, ALP1, that arose from the whole genome duplication","termid":"PBO:0113275"}


id: GO:1904962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The vesicle-mediated and directed movement of substances from plastid to vacuole.","definition_xrefs":["GO_REF:0000076","PMID:25281689","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar transport","termid":"GO:0007034"},{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"},{"relation_name":"is_a","term_name":"cytosolic transport","termid":"GO:0016482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"plastid to vacuole vesicle-mediated transport","synonyms":[{"name":"plastid to vacuolar carboxypeptidase Y vesicle-mediated transport","type":"related"}],"termid":"GO:1904962"}


id: PBO:0087645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the GPI:protein transamidase complex; removes the GPI-anchoring signal and attaches GPI (glycosylphosphatidylinositol) to proteins in the ER; human homolog GPAA1 can complement growth defects of yeast thermosensitive mutant at restrictive temperature","termid":"PBO:0087645"}


id: PBO:0040324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase inhibitory factor subunit 1","termid":"PBO:0040324"}


id: PBO:0003995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin-containing T-complex alpha subunit Cct1","termid":"PBO:0003995"}


id: PBO:0073798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 5","termid":"PBO:0073798"}


id: PBO:0088394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P subunit Rpr2","termid":"PBO:0088394"}


id: MONDO:0033665
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"hearing loss, autosomal dominant 78","secondary_identifiers":["OMIM:619081","DOID:0112159","MEDGEN:1777362","GARD:18156","UMLS:C5436768"],"synonyms":[{"name":"DFNA78","type":"narrow"},{"name":"deafness, autosomal dominant 78","type":"narrow"}],"termid":"MONDO:0033665","xrefs":{"Monarch":{"xref_id":"0033665"}}}


id: PBO:0039282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG1 like 11, pseudogene","termid":"PBO:0039282"}


id: PBO:0116651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 2 binding protein pseudogene 6","termid":"PBO:0116651"}


id: FYPO:0004286
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of double-strand break repair via nonhomologous end joining (NHEJ) is normal (i.e. indistinguishable from wild type). NHEJ is the repair of double-strand breaks in DNA in which the two broken ends are rejoined with little or no sequence complementarity.","definition_xrefs":["GO:0006303","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal double-strand break repair","termid":"FYPO:0001033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0000298","FYPO:0001312"],"is_obsolete":false,"name":"normal double-strand break repair via nonhomologous end joining","synonyms":[{"name":"normal NHEJ","type":"exact"},{"name":"normal double-strand break repair via nonhomologous end joining during mitotic cell cycle","type":"related"},{"name":"normal double-strand break repair via nonhomologous end joining during vegetative growth","type":"exact"},{"name":"normal nonhomologous end joining","type":"exact"}],"termid":"FYPO:0004286"}


id: GO:0052482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of cell wall modification, in which the cell wall is reinforced and made thicker, that occurs as part of the defense response of an organism.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response","termid":"GO:0006952"},{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"},{"relation_name":"is_a","term_name":"cell wall thickening","termid":"GO:0052386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"defense response by cell wall thickening","synonyms":[{"name":"cell wall thickening during defense response","type":"related"}],"termid":"GO:0052482"}


id: MONDO:0023243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The Glass-Chapman-Hockley syndrome is a very rare disease. To date, the syndrome has only been reported in one family with five members affected in three generations. The first patients were two brothers that had an abnormally-shaped head due to coronal craniosynostosis. Their mother, maternal aunt, and maternal grandmother were also found to have the syndrome. The signs and symptoms varied from person to person; however, the signs and symptoms included coronal craniosynostosis, small middle part of the face (midfacial hypoplasia), and short fingers (brachydactyly).The inheritance is thought to be autosomal dominant. No genes have been identified for this syndrome. Treatment included surgery to correct the craniosynostosis. No issues with development and normal intelligence were reported. This is an n-of-1 use case where only one patient or family has been described with this disorder.","definition_xrefs":["GARD:0002479"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0000426"],"is_obsolete":false,"name":"glass-chapman-hockley syndrome","secondary_identifiers":["SCTID:720814001","Orphanet:1535"],"synonyms":[{"name":"craniosynostosis - dysmorphism - brachydactyly","type":"related"},{"name":"craniosynostosis brachydactyly","type":"related"},{"name":"craniosynostosis with facial dysmorphism and brachydactyly syndrome","type":"exact"},{"name":"craniosynostosis-dysmorphism-brachydactyly syndrome","type":"related"},{"name":"glass chapman hockley syndrome","type":"related"}],"termid":"MONDO:0023243","xrefs":{"Monarch":{"xref_id":"0023243"}}}


id: SO:0000564
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one DJ-gene, one J-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_DJ_J_C_cluster","synonyms":[{"name":"V DJ J C cluster","type":"exact"},{"name":"V-(DJ)-J-C-CLUSTER","type":"exact"}],"termid":"SO:0000564"}


id: GO:0003782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete F-actin capping activity (obsolete GO:0003782)","synonyms":[{"name":"F-actin capping activity","type":"exact"}],"termid":"GO:0003782"}


id: GO:2000101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mammary stem cell proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"mammary stem cell proliferation","termid":"GO:0002174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mammary stem cell proliferation","termid":"GO:2000101"}


id: PBO:0039737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein F","termid":"PBO:0039737"}


id: PBO:0028944
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_glutathione_synthase_activity","termid":"PBO:0028944"}


id: PBO:0061483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuregulin 2","termid":"PBO:0061483"}


id: PR:O14285
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spc34 gene.","definition_xrefs":["UniProtKB:O14285","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit spc34 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8C9.17c","synonyms":[{"name":"Spom972h-spc34","type":"exact"},{"name":"outer kinetochore protein spc34 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14285"}


id: PBO:0113507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tubulin folding factor D involved in beta-tubulin (Tub2p) folding; isolated as mutant with increased chromosome loss and sensitivity to benomyl; CIN1 mRNA level is reduced when downstream gene MNE1 is deleted","termid":"PBO:0113507"}


id: GO:0051704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A biological process which involves another organism of the same or different species.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism process (obsolete GO:0051704)","synonyms":[{"name":"interaction between organisms","type":"exact"},{"name":"physiological interaction between organisms","type":"exact"},{"name":"physiological interaction with other organism","type":"exact"}],"termid":"GO:0051704"}


id: GO:0032465
data:
  {"annotated_genes":["SJAG_03704","SJAG_03309","SJAG_01464","SJAG_00526","SJAG_03936","SJAG_02838","SJAG_04597","SJAG_03508","SJAG_01188","SJAG_00514","SJAG_02392","SJAG_04776","SJAG_01790","SJAG_04412","SJAG_02807","SJAG_04943","SJAG_01456","SJAG_03592","SJAG_02592","SJAG_06270","SJAG_01114","SJAG_00256","SJAG_00845","SJAG_01863","SJAG_03692","SJAG_02232","SJAG_02380","SJAG_02795","SJAG_04551","SJAG_03353","SJAG_03681","SJAG_05290","SJAG_03342","SJAG_01386","SJAG_01837","SJAG_03887","SJAG_02169","SJAG_00883","SJAG_00229","SJAG_04468","SJAG_03631","SJAG_03581","SJAG_04455","SJAG_01805","SJAG_03376","SJAG_00082","SJAG_01787","SJAG_02514","SJAG_04666","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000432"},{"annotations":[96181,104187,92579,105514,112614,97668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[105515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903472"},{"annotations":[94655,101483,103961,108931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902413"},{"annotations":[104192],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"},{"annotations":[92538,94656,117763,106871,95269,103090,94741,93549,109375,97453,101405,108932,112015,109065,74647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"},{"annotations":[91813,96223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[115219,112373,96224,89342,96394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903473"},{"annotations":[105520,112616,92581,121359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903617"},{"annotations":[115220,107010,117333,119752,94231,91685,79685,108217,108878,95616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140281"},{"annotations":[94232,89343,96227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905758"},{"annotations":[121075,95622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903499"},{"annotations":[108975,102763,120573,93663,78653,91631,105309,111058,119381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902412"},{"annotations":[89668,103211,113229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902472"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the division of the cytoplasm of a cell and its separation into two daughter cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of cell division","termid":"GO:0051302"},{"relation_name":"regulates","term_name":"cytokinesis","termid":"GO:0000910"}],"gene_count":50,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00229":null,"SJAG_00256":null,"SJAG_00514":null,"SJAG_00526":null,"SJAG_00845":null,"SJAG_00883":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01386":null,"SJAG_01456":null,"SJAG_01464":null,"SJAG_01787":null,"SJAG_01790":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01863":null,"SJAG_02169":null,"SJAG_02232":null,"SJAG_02380":null,"SJAG_02392":null,"SJAG_02514":null,"SJAG_02592":null,"SJAG_02795":null,"SJAG_02807":null,"SJAG_02838":null,"SJAG_03048":null,"SJAG_03309":null,"SJAG_03342":null,"SJAG_03353":null,"SJAG_03376":null,"SJAG_03508":null,"SJAG_03581":null,"SJAG_03592":null,"SJAG_03631":null,"SJAG_03681":null,"SJAG_03692":null,"SJAG_03704":null,"SJAG_03887":null,"SJAG_03936":null,"SJAG_04412":null,"SJAG_04455":null,"SJAG_04468":null,"SJAG_04551":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_04943":null,"SJAG_05290":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of cytokinesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:25866389":null,"PMID:32915139":null},"secondary_identifiers":["GO:0071775"],"synonyms":[{"name":"regulation of cell cycle cytokinesis","type":"exact"}],"termid":"GO:0032465","terms_by_termid":{"GO:0031030":null,"GO:0120306":null,"GO:0140281":null,"GO:1902412":null,"GO:1902413":null,"GO:1902472":null,"GO:1903472":null,"GO:1903473":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:1903617":null,"GO:1905757":null,"GO:1905758":null,"GO:2000432":null}}


id: PBO:0069160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 412, pseudogene","termid":"PBO:0069160"}


id: GO:0033931
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of (1->4)-alpha-D-galactosaminidic linkages in poly(D-galactosamine).","definition_xrefs":["EC:3.2.1.109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosaminidase activity","termid":"GO:0015929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"endogalactosaminidase activity","secondary_identifiers":["MetaCyc:3.2.1.109-RXN"],"synonyms":[{"name":"galactosaminoglycan glycanohydrolase activity","type":"related"}],"termid":"GO:0033931"}


id: PBO:0027870
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_and_delayed_cell_cycle_arrest_in_mitotic_G1_phase_in_response_to_nitrogen_starvation","termid":"PBO:0027870"}


id: PBO:0046553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group H member 7","termid":"PBO:0046553"}


id: PBO:0027853
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_vacuolar_membrane","termid":"PBO:0027853"}


id: GO:1903040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an exon-exon junction complex.","definition_xrefs":["GO_REF:0000079","PMID:17606899","GOC:sart","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"exon-exon junction complex assembly","synonyms":[{"name":"EJC assembly","type":"exact"},{"name":"EJC formation","type":"exact"},{"name":"exon-exon junction complex formation","type":"exact"}],"termid":"GO:1903040"}


id: PBO:0041648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit alpha2delta 3","termid":"PBO:0041648"}


id: GO:0018921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3-hydroxybenzyl alcohol, an aromatic compound which is an intermediate in several metabolic pathways, including the biosynthesis of patulin, a toxin and antiviral agent produced by some moulds such as Penicillium patulinum.","definition_xrefs":["UM-BBD_pathwayID:mcr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"3-hydroxybenzyl alcohol metabolic process","synonyms":[{"name":"3-hydroxybenzyl alcohol metabolism","type":"exact"}],"termid":"GO:0018921"}


id: PBO:0073436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3b subunit 5","termid":"PBO:0073436"}


