# terms

id: GO:0016287
data:
  {"annotated_genes":["SJAG_03305","SJAG_02654"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71825,72289],"is_not":false,"summary":null,"term":"GO:0016287"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + glycerone phosphate = 1-acylglycerone 3-phosphate + CoA.","definition_xrefs":["EC:2.3.1.42","RHEA:17657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02654":null,"SJAG_03305":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"glycerone-phosphate O-acyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R01013","Reactome:R-HSA-75879","Reactome:R-HSA-1483002","MetaCyc:2.3.1.42-RXN"],"synonyms":[{"name":"acyl-CoA:glycerone-phosphate O-acyltransferase activity","type":"related"},{"name":"dihydroxyacetone phosphate acyltransferase activity","type":"related"}],"termid":"GO:0016287","terms_by_termid":{"GO:0016287":null}}


id: GO:0106310
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate.","definition_xrefs":["RHEA:17989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0004672","GO:0140096","GO:0003674","GO:0016301","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"protein serine kinase activity","secondary_identifiers":["Reactome:R-HSA-9860808","Reactome:R-HSA-9729330","Reactome:R-HSA-9860792","Reactome:R-HSA-9821967","Reactome:R-HSA-9841265","Reactome:R-HSA-9821982"],"synonyms":[{"name":"protein-serine kinase activity","type":"exact"}],"termid":"GO:0106310"}


id: GO:1902267
data:
  {"annotated_genes":["SJAG_04469"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108224],"is_not":false,"summary":null,"term":"GO:1902267"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of polyamine transmembrane transport.","definition_xrefs":["PMID:23755272","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"regulates","term_name":"polyamine transmembrane transport","termid":"GO:1902047"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04469":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of polyamine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902267","terms_by_termid":{"GO:1902267":null}}


id: PBO:0052694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 16 pseudogene 2","termid":"PBO:0052694"}


id: GO:0072189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the ureter over time, from its formation to the mature structure. The ureter is a muscular tube that transports urine from the kidney to the urinary bladder or from the Malpighian tubule to the hindgut.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"renal system development","termid":"GO:0072001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureter development","termid":"GO:0072189"}


id: MONDO:0045012
data:
  {"annotated_genes":["SJAG_02696","SJAG_04865","SJAG_01474","SJAG_00717","SJAG_03018","SJAG_03024","SJAG_02855","SJAG_04270","SJAG_03509","SJAG_02148","SJAG_04810"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[89062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013310"},{"annotations":[87350,87349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011503"},{"annotations":[87846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008974"},{"annotations":[88543,88544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009849"},{"annotations":[88408,88409],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011816"},{"annotations":[86843,86842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012481"},{"annotations":[87571],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014793"},{"annotations":[89033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010035"}]},"cv_name":"mondo","definition":"A disease that has its basis in the disruption of steroid metabolic process.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00717":null,"SJAG_01474":null,"SJAG_02148":null,"SJAG_02696":null,"SJAG_02855":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03509":null,"SJAG_04270":null,"SJAG_04810":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"steroid metabolism disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0268283","MEDGEN:541265","SCTID:28710006"],"synonyms":[{"name":"disorder of steroid metabolic process","type":"exact"},{"name":"disorder of steroid metabolism","type":"exact"},{"name":"steroid metabolic process disease","type":"exact"},{"name":"steroid metabolism disease","type":"exact"}],"termid":"MONDO:0045012","terms_by_termid":{"MONDO:0008974":null,"MONDO:0009849":null,"MONDO:0010035":null,"MONDO:0010621":null,"MONDO:0011503":null,"MONDO:0011816":null,"MONDO:0012481":null,"MONDO:0013310":null,"MONDO:0014793":null},"xrefs":{"Monarch":{"xref_id":"0045012"}}}


id: PBO:0053445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 392","termid":"PBO:0053445"}


id: PBO:0069962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1256, pseudogene","termid":"PBO:0069962"}


id: PBO:0050443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein R pseudogene 1","termid":"PBO:0050443"}


id: MONDO:0006382
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma arising from the thyroid gland showing only limited evidence of follicular cell differentiation. Microscopically, the adenocarcinoma cells are arranged in insular, solid, and trabecular patterns. There is associated necrosis, and vascular invasion. The prognosis depends on the tumor stage, complete or partial surgical removal of the tumor, and the degree of response to radioactive iodine therapy (adapted from WHO Tumors of Endocrine Organs, IARC Press, Lyon 2004)","definition_xrefs":["NCIT:C6040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"poorly differentiated thyroid gland carcinoma","secondary_identifiers":["EFO:1000489","ONCOTREE:THPD","MEDGEN:266094","UMLS:C1266050","ICDO:8337/3"],"synonyms":[{"name":"insular carcinoma","type":"exact"},{"name":"poorly differentiated carcinoma of the thyroid gland","type":"exact"},{"name":"poorly differentiated carcinoma of thyroid gland","type":"exact"},{"name":"poorly differentiated thyroid cancer","type":"related"},{"name":"poorly differentiated thyroid carcinoma","type":"exact"},{"name":"poorly differentiated thyroid gland cancer","type":"exact"},{"name":"poorly differentiated thyroid gland carcinoma","type":"exact"},{"name":"thyroid gland poorly differentiated carcinoma","type":"exact"}],"termid":"MONDO:0006382","xrefs":{"Monarch":{"xref_id":"0006382"}}}


id: PBO:0039278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG1 like 7, pseudogene","termid":"PBO:0039278"}


id: PBO:0000378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF221 family protein implicated in Golgi to plasma membrane transport (predicted)","termid":"PBO:0000378"}


id: PBO:0031844
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cytoskeleton_morphology_during_vegetative_growth","termid":"PBO:0031844"}


id: PBO:0072843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor APC domain containing 1","termid":"PBO:0072843"}


id: GO:0007539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transmission of information about sexual status from the initial, general, determination to signals specific to the soma.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary sex determination","termid":"GO:0007538"},{"relation_name":"part_of","term_name":"somatic sex determination","termid":"GO:0018993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary sex determination, soma","termid":"GO:0007539"}


id: PBO:0088722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA demethylase","termid":"PBO:0088722"}


id: PBO:0024828
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by Brassica napus BnMAP4Kalpha2","termid":"PBO:0024828"}


id: PBO:0034378
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_gametology_relationship_with","termid":"PBO:0034378"}


id: GO:0150069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of tubulin deacetylase activity.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:19457097"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of tubulin deacetylase activity (obsolete GO:0150069)","termid":"GO:0150069"}


id: PATO:0000096
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000096 relative drug sensitivity (obsolete PATO:0000096)","termid":"PATO:0000096"}


id: GO:0035358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the peroxisome proliferator activated receptor signaling pathway.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"peroxisome proliferator activated receptor signaling pathway","termid":"GO:0035357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of peroxisome proliferator activated receptor signaling pathway","synonyms":[{"name":"regulation of PPAR signaling pathway","type":"exact"},{"name":"regulation of peroxisome proliferator activated receptor signalling pathway","type":"exact"},{"name":"regulation of peroxisome proliferator-activated receptor signaling pathway","type":"exact"}],"termid":"GO:0035358"}


id: PBO:0074123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC30A6 pseudogene 1","termid":"PBO:0074123"}


id: GO:0048445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the carpel are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ morphogenesis","termid":"GO:0048444"},{"relation_name":"part_of","term_name":"carpel development","termid":"GO:0048440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carpel morphogenesis","secondary_identifiers":["GO:0048430"],"termid":"GO:0048445"}


id: PBO:0054029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1360","termid":"PBO:0054029"}


id: MONDO:0005884
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection with flukes of the genus Opisthorchis.","definition_xrefs":["MESH:D009889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helminthiasis","termid":"MONDO:0004664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opisthorchiasis","secondary_identifiers":["SCTID:1059007","icd11.foundation:1401769984","UMLS:C0029106","ICD10CM:B66.0","EFO:0007404","ICD9:121.0","MEDGEN:10453","DOID:13768"],"synonyms":[{"name":"infection by Opisthorchis","type":"exact"},{"name":"infection due to Opisthorchis (felineus)(viverrini)","type":"related"},{"name":"infection due to cat liver fluke","type":"related"}],"termid":"MONDO:0005884","xrefs":{"Monarch":{"xref_id":"0005884"}}}


id: PBO:0002593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tRNA(Ile)-lysidine synthetase family (predicted)","termid":"PBO:0002593"}


id: PBO:0056260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MALT1 paracaspase","termid":"PBO:0056260"}


id: GO:0061257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a mesonephric glomerular visceral epithelial cell over time, from its formation to the mature structure. A mesonephric glomerular visceral epithelial cell is a specialized epithelial cell that contains 'feet' that interdigitate with the 'feet' of other glomerular epithelial cells in the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric glomerular epithelial cell development","termid":"GO:0061251"},{"relation_name":"is_a","term_name":"podocyte development","termid":"GO:0072015"},{"relation_name":"part_of","term_name":"mesonephric podocyte differentiation","termid":"GO:0061256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric podocyte development","synonyms":[{"name":"mesonephric glomerular visceral epithelial cell development","type":"exact"}],"termid":"GO:0061257"}


id: GO:0033978
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-phosphonopyruvate + H2O = H+ + phosphate + pyruvate.","definition_xrefs":["RHEA:16673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-phosphorus bonds","termid":"GO:0016827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"phosphonopyruvate hydrolase activity","secondary_identifiers":["MetaCyc:3.11.1.3-RXN","KEGG_REACTION:R08200","EC:3.11.1.3"],"synonyms":[{"name":"PPH","type":"related"}],"termid":"GO:0033978"}


id: MONDO:0019984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acquired form of renal tubular dysgenesis that develops in donor fetuses due to the uneven shunting of growth factor and nutrients to the kidney of the recipient and is characterized by absent or poorly developed proximal tubules, persistent oligohydramnios and consequently the Potter sequence (facial dysmorphism with large and flat low-set ears, lung hypoplasia, arthrogryposis and limb positioning defects).","definition_xrefs":["Orphanet:97367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal tubular dysgenesis","termid":"MONDO:0017609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal tubular dysgenesis due to twin-twin transfusion","secondary_identifiers":["GARD:19377","icd11.foundation:122234138","MEDGEN:1766862","UMLS:C5438872"],"termid":"MONDO:0019984","xrefs":{"Monarch":{"xref_id":"0019984"}}}


id: PBO:0074081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 52","termid":"PBO:0074081"}


id: GO:0035472
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the choriogonadotropin hormone to initiate a change in cell activity.","definition_xrefs":["GOC:bf","ISBN:0198506732","PMID:1922095"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"protein-hormone receptor activity","termid":"GO:0016500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"choriogonadotropin hormone receptor activity","synonyms":[{"name":"CG receptor activity","type":"exact"},{"name":"chorio-gonadotrophin receptor activity","type":"exact"},{"name":"chorionic gonadotropin hormone receptor","type":"exact"}],"termid":"GO:0035472"}


id: PR:Q9URX3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A D-cysteine desulfhydrase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02270","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-aminocyclopropane-1-carboxylate deaminase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC922.03","secondary_identifiers":["UniProtKB:Q9URX3"],"synonyms":[{"name":"ACC deaminase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ACCD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-dcyD","type":"exact"}],"termid":"PR:Q9URX3"}


id: GO:0018342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a prenyl group to a protein; geranyl, farnesyl, or geranylgeranyl groups may be added.","definition_xrefs":["ISBN:0198506732","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"},{"relation_name":"is_a","term_name":"prenylation","termid":"GO:0097354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein prenylation","secondary_identifiers":["GO:0018346"],"synonyms":[{"name":"C-terminal protein prenylation","type":"narrow"},{"name":"protein amino acid prenylation","type":"exact"}],"termid":"GO:0018342"}


id: PBO:0058375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4747","termid":"PBO:0058375"}


id: FYPO:0001470
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing tacrolimus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002058","FYPO:0000257","FYPO:0002057","FYPO:0002060","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on tacrolimus","synonyms":[{"name":"normal cell population growth in presence of tacrolimus","type":"exact"},{"name":"normal cell population growth on tacrolimus","type":"exact"},{"name":"normal cellular response to FK506","type":"exact"},{"name":"normal cellular response to tacrolimus","type":"related"},{"name":"normal vegetative cell population growth on tacrolimus","type":"exact"}],"termid":"FYPO:0001470"}


id: PBO:0089678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex 3'-5'-exoribonuclease subunit 6","termid":"PBO:0089678"}


id: PBO:0003375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR3","termid":"PBO:0003375"}


id: PBO:0057717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR1302-2 host gene","termid":"PBO:0057717"}


id: FYPO:0005159
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the synthesis of DNA that occurs as part of DNA replication is decreased.","definition_xrefs":["PMID:22970243","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication","termid":"FYPO:0001343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000293","FYPO:0001320"],"is_obsolete":false,"name":"decreased DNA synthesis involved in mitotic DNA replication","synonyms":[{"name":"decreased DNA biosynthetic process involved in mitotic DNA replication","type":"exact"},{"name":"decreased DNA synthesis involved in DNA replication during mitotic cell cycle","type":"exact"},{"name":"decreased DNA synthesis involved in mitotic DNA replication during vegetative growth","type":"exact"},{"name":"reduced DNA synthesis involved in mitotic DNA replication","type":"exact"}],"termid":"FYPO:0005159"}


id: PBO:0063588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 3","termid":"PBO:0063588"}


id: GO:0019342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of trypanothione (N1,N6,-bis(glutathionyl)spermidine) in two steps from glutathione and spermidine via an N1- or N8-glutathionylspermidine intermediate. Trypanothione appears to be an essential redox intermediate in intracellular thiol redox regulation. It also plays a role in protecting against oxidative stress.","definition_xrefs":["MetaCyc:TRYPANOSYN-PWY","PMID:9677355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trypanothione metabolic process","termid":"GO:0046206"},{"relation_name":"is_a","term_name":"glutathione derivative biosynthetic process","termid":"GO:1901687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"trypanothione biosynthetic process","synonyms":[{"name":"trypanothione anabolism","type":"exact"},{"name":"trypanothione biosynthesis","type":"exact"},{"name":"trypanothione formation","type":"exact"},{"name":"trypanothione synthesis","type":"exact"}],"termid":"GO:0019342"}


id: GO:0071387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cortisol stimulus. Cortisol is the major natural glucocorticoid synthesized in the zona fasciculata of the adrenal cortex; it affects the metabolism of glucose, protein, and fats and has appreciable mineralocorticoid activity. It also regulates the immune system and affects many other functions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cortisol","termid":"GO:0051414"},{"relation_name":"is_a","term_name":"cellular response to glucocorticoid stimulus","termid":"GO:0071385"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cortisol stimulus","synonyms":[{"name":"cellular response to hydrocortisone stimulus","type":"exact"}],"termid":"GO:0071387"}


id: SO:0000432
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The U5 segment of the three-prime long terminal repeat.","direct_ancestors":[{"relation_name":"is_a","term_name":"three_prime_LTR_component","termid":"SO:0000849"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5_three_prime_LTR_region","synonyms":[{"name":"U5 3' long terminal repeat region","type":"exact"},{"name":"U5 three prime LTR region","type":"exact"}],"termid":"SO:0000432"}


id: FYPO:0001757
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein phosphatase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphatase activity","termid":"FYPO:0001756"},{"relation_name":"is_a","term_name":"decreased phosphatase activity","termid":"FYPO:0004304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"decreased protein phosphatase activity","synonyms":[{"name":"decreased phosphoprotein phosphatase activity","type":"exact"},{"name":"reduced protein phosphatase activity","type":"exact"}],"termid":"FYPO:0001757"}


id: GO:1904006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of phospholipase D activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:11211872"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phospholipase D activity (obsolete GO:1904006)","synonyms":[{"name":"down regulation of choline phosphatase activity","type":"exact"},{"name":"down regulation of lecithinase D activity","type":"exact"},{"name":"down regulation of lipophosphodiesterase II activity","type":"exact"},{"name":"down regulation of phosphatidylcholine phosphatidohydrolase activity","type":"exact"},{"name":"down regulation of phospholipase D activity","type":"exact"},{"name":"down-regulation of choline phosphatase activity","type":"exact"},{"name":"down-regulation of lecithinase D activity","type":"exact"},{"name":"down-regulation of lipophosphodiesterase II activity","type":"exact"},{"name":"down-regulation of phosphatidylcholine phosphatidohydrolase activity","type":"exact"},{"name":"down-regulation of phospholipase D activity","type":"exact"},{"name":"downregulation of choline phosphatase activity","type":"exact"},{"name":"downregulation of lecithinase D activity","type":"exact"},{"name":"downregulation of lipophosphodiesterase II activity","type":"exact"},{"name":"downregulation of phosphatidylcholine phosphatidohydrolase activity","type":"exact"},{"name":"downregulation of phospholipase D activity","type":"exact"},{"name":"inhibition of choline phosphatase activity","type":"narrow"},{"name":"inhibition of lecithinase D activity","type":"narrow"},{"name":"inhibition of lipophosphodiesterase II activity","type":"narrow"},{"name":"inhibition of phosphatidylcholine phosphatidohydrolase activity","type":"narrow"},{"name":"inhibition of phospholipase D activity","type":"narrow"},{"name":"negative regulation of choline phosphatase activity","type":"exact"},{"name":"negative regulation of lecithinase D activity","type":"exact"},{"name":"negative regulation of lipophosphodiesterase II activity","type":"exact"},{"name":"negative regulation of phosphatidylcholine phosphatidohydrolase activity","type":"exact"}],"termid":"GO:1904006"}


id: GO:1990311
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type-I cohesin domain of a protein. Type-I cohesin domain is the binding partner of type-I dockerin domain.","definition_xrefs":["PMID:24080387","GOC:mengo_curators","PMID:23195689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"type-I cohesin domain binding","termid":"GO:1990311"}


id: PBO:0116225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucan synthesis regulator, Gsr2","termid":"PBO:0116225"}


id: GO:0060948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a cardiac vascular smooth muscle cell over time, from its formation to the mature state.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac cell development","termid":"GO:0055006"},{"relation_name":"is_a","term_name":"vascular associated smooth muscle cell development","termid":"GO:0097084"},{"relation_name":"part_of","term_name":"cardiac vascular smooth muscle cell differentiation","termid":"GO:0060947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac vascular smooth muscle cell development","synonyms":[{"name":"heart vascular smooth muscle cell development","type":"exact"}],"termid":"GO:0060948"}


id: MONDO:0006028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the caecum","direct_ancestors":[{"relation_name":"is_a","term_name":"colon adenocarcinoma","termid":"MONDO:0002271"},{"relation_name":"is_a","term_name":"cecum carcinoma","termid":"MONDO:0006029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"cecum adenocarcinoma","secondary_identifiers":["UMLS:C1332866","EFO:1000020","NCIT:C5543","MEDGEN:234098","DOID:3039","SCTID:413446001"],"synonyms":[{"name":"adenocarcinoma of cecum","type":"exact"},{"name":"adenocarcinoma of the cecum","type":"exact"},{"name":"caecum adenocarcinoma","type":"exact"},{"name":"cecal adenocarcinoma","type":"exact"},{"name":"cecum adenocarcinoma","type":"exact"}],"termid":"MONDO:0006028","xrefs":{"Monarch":{"xref_id":"0006028"}}}


id: MONDO:0015856
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"breast disorder","termid":"MONDO:0002657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndromic breast hypoplasia/aplasia","secondary_identifiers":["Orphanet:180193","GARD:20196","MEDGEN:1842220","UMLS:C5680482"],"termid":"MONDO:0015856","xrefs":{"Monarch":{"xref_id":"0015856"}}}


id: PBO:0050465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HORMA domain containing 2","termid":"PBO:0050465"}


id: GO:0015552
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of propionate from one side of a membrane to the other. Propionate (or propanoate) is the organic acid CH3-CH2-COOH.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain fatty acid transmembrane transporter activity","termid":"GO:0015636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"propionate transmembrane transporter activity","termid":"GO:0015552"}


id: GO:0044537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the quantity of fibrinogen circulating in the bloodstream.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of circulating fibrinogen levels","termid":"GO:0044537"}


id: PBO:0051513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IKAROS family zinc finger 3","termid":"PBO:0051513"}


id: MONDO:0011720
data:
  {"annotated_genes":["SJAG_02463","SJAG_01941"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88604,88605],"is_not":false,"summary":null,"term":"MONDO:0011720"}]},"cv_name":"mondo","definition":"Any azoospermia in which the cause of the disease is a mutation in the SLC26A8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01941":null,"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18399","OMIM:606766","DOID:0070168","MEDGEN:1648302","UMLS:C4721889","MESH:C564665"],"synonyms":[{"name":"SLC26A8 azoospermia","type":"exact"},{"name":"SPGF3","type":"related"},{"name":"azoospermia caused by mutation in SLC26A8","type":"exact"},{"name":"spermatogenic failure 3","type":"exact"},{"name":"spermatogenic failure type 3","type":"exact"}],"termid":"MONDO:0011720","terms_by_termid":{"MONDO:0011720":null},"xrefs":{"Monarch":{"xref_id":"0011720"}}}


id: PBO:0074682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 63D","termid":"PBO:0074682"}


id: GO:0045698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of synergid cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of synergid differentiation","termid":"GO:0045697"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"synergid differentiation","termid":"GO:0009563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of synergid differentiation","synonyms":[{"name":"down regulation of synergid differentiation","type":"exact"},{"name":"down-regulation of synergid differentiation","type":"exact"},{"name":"downregulation of synergid differentiation","type":"exact"},{"name":"inhibition of synergid differentiation","type":"narrow"},{"name":"negative regulation of synergid cell differentiation","type":"exact"}],"termid":"GO:0045698"}


id: PBO:0113816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-acetyltransferase activity","termid":"PBO:0113816"}


id: PBO:0087124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA 5'-triphosphatase involved in mRNA 5' capping; subunit of mRNA capping enzyme, which is a heterotetramer composed of a Cet1p homodimer and two molecules of guanylyltransferase Ceg1p; Cet1p also has a role in regulation of RNAPII pausing at promoter-proximal sites; interaction between Cet1p and Ceg1p is required for Ceg1p nuclear import; mammalian enzyme is single bifunctional polypeptide; human homolog RNGTT can complement yeast cet1 null mutant","termid":"PBO:0087124"}


id: PBO:0047044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 107 member A","termid":"PBO:0047044"}


id: MONDO:0010570
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An X-linked malformation syndrome characterized by facial asymmetry (particularly orbital), body asymmetry, midline defects (hypertelorism, frontal bossing, broad grooved or bifid nasal tip, cleft lip and/or palate, high arched palate), skeletal anomalies (clavicle pseudoarthrosis, coronal craniosynostosis, various digital and limb anomalies including syndactyly, clinodactyly of the 5th finger, broad thumbs) and ectodermal dysplasias (dental anomalies, grooved nails, wiry hair). Contrary to most X-linked disorders, females are much more severely affected whereas males are asymptomatic or present with a mild phenotype, frequently only displaying hypertelorism.","definition_xrefs":["Orphanet:1520"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"frontonasal dysplasia","termid":"MONDO:0016643"},{"relation_name":"excluded_subClassOf","term_name":"acrofacial dysostosis","termid":"MONDO:0018237"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"neurocristopathy","termid":"MONDO:0021635"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniofrontonasal syndrome","secondary_identifiers":["OMIM:304110","UMLS:C0220767","DOID:14737","MEDGEN:65095","SCTID:715421009","MESH:C536456","GARD:1578","NORD:1012"],"synonyms":[{"name":"CFND","type":"exact"},{"name":"CFNS","type":"exact"},{"name":"Craniofrontonasal Dysplasia","type":"exact"},{"name":"craniofrontonasal dysostosis","type":"related"},{"name":"craniofrontonasal dysplasia","type":"exact"},{"name":"craniofrontonasal dysplasia, X-linked dominant","type":"exact"},{"name":"craniofrontonasal syndrome","type":"exact"}],"termid":"MONDO:0010570","xrefs":{"Monarch":{"xref_id":"0010570"}}}


id: GO:0009871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by ethylene (ethene) involved in jasmonic acid/ethylene dependent systemic resistance.","definition_xrefs":["GOC:jy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethylene-activated signaling pathway","termid":"GO:0009873"},{"relation_name":"part_of","term_name":"jasmonic acid and ethylene-dependent systemic resistance","termid":"GO:0009861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway","synonyms":[{"name":"ethene mediated signaling pathway (jasmonic acid/ethene-dependent systemic resistance)","type":"exact"},{"name":"ethylene mediated signaling pathway (jasmonic acid/ethylene-dependent systemic resistance)","type":"exact"},{"name":"jasmonic acid and ethene-dependent systemic resistance, ethene mediated signaling pathway","type":"exact"},{"name":"jasmonic acid/ethene-dependent systemic resistance, ethene mediated signaling pathway","type":"exact"},{"name":"jasmonic acid/ethene-dependent systemic resistance, ethene mediated signalling pathway","type":"exact"},{"name":"jasmonic acid/ethylene-dependent systemic resistance, ethylene mediated signaling pathway","type":"exact"},{"name":"jasmonic acid/ethylene-dependent systemic resistance, ethylene mediated signalling pathway","type":"exact"}],"termid":"GO:0009871"}


id: PBO:0078390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 1-5","termid":"PBO:0078390"}


id: SO:0000563
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 12 or 23 nucleotide spacer between two regions of an immunoglobulin/T-cell receptor gene that may be rearranged by recombinase.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_feature","termid":"SO:0000301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebrate_immune_system_gene_recombination_spacer","synonyms":[{"name":"vertebrate immune system gene recombination spacer","type":"exact"}],"termid":"SO:0000563"}


id: PBO:0005555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexaprenyldihydroxybenzoate methyltransferase Coq3","termid":"PBO:0005555"}


id: PBO:0040112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with SH3 domain, ankyrin repeat and PH domain 2","termid":"PBO:0040112"}


id: MONDO:0100547
data:
  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id: PBO:0084322
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Karyopherin beta; mediates nuclear import of ribosomal proteins prior to assembly into ribosomes and import of histones H3 and H4; localizes to the nuclear pore, nucleus, and cytoplasm; exhibits genetic interactions with RAI1","termid":"PBO:0084322"}


id: PBO:0047513
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FES proto-oncogene, tyrosine kinase","termid":"PBO:0047513"}


id: MONDO:0859175
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id: GO:0044226
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id: PBO:0057680
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id: GO:0086080
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id: PBO:0004445
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  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NRde-Like","termid":"PBO:0004445"}


id: PBO:0080029
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 15","termid":"PBO:0080029"}


id: GO:0042299
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2,3-epoxysqualene = lupeol. This reaction is the cyclization of (S)-2,3-epoxysqualene (2,3-oxidosqualene) to lupeol.","definition_xrefs":["MetaCyc:RXN-111","PMID:9883589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidosqualene cyclase activity","termid":"GO:0031559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"lupeol synthase activity","secondary_identifiers":["RHEA:31383","EC:5.4.99.41"],"synonyms":[{"name":"oxidosqualene:lupeol cyclase activity","type":"exact"}],"termid":"GO:0042299"}


id: GO:0001803
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of type III hypersensitivity, a type of inflammatory response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hypersensitivity","termid":"GO:0002883"},{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte mediated immunity","termid":"GO:0002886"},{"relation_name":"is_a","term_name":"regulation of immunoglobulin mediated immune response","termid":"GO:0002889"},{"relation_name":"regulates","term_name":"type III hypersensitivity","termid":"GO:0001802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of type III hypersensitivity","termid":"GO:0001803"}


id: PBO:0083745
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id: PBO:0081978
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 5A","termid":"PBO:0081978"}


id: GO:0071347
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-1 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to interleukin-1","termid":"GO:0070555"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-1","synonyms":[{"name":"cellular response to IL-1","type":"exact"}],"termid":"GO:0071347"}


id: PBO:0001820
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated RNA-binding protein Sap49","termid":"PBO:0001820"}


id: PBO:0082284
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Apyrase with wide substrate specificity; helps prevent inhibition of glycosylation by hydrolyzing nucleoside tri- and diphosphates that inhibit glycotransferases; partially redundant with Gda1p; mediates adenovirus E4orf4-induced toxicity","termid":"PBO:0082284"}


id: GO:0051404
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of Arg-Xaa bonds.","definition_xrefs":["EC:3.4.22.8"],"gene_count":0,"genotype_count":0,"name":"obsolete clostripain activity (obsolete GO:0051404)","synonyms":[{"name":"Clostridium histolyticum proteinase B","type":"related"},{"name":"alpha-clostridipain","type":"related"},{"name":"clostridiopeptidase B activity","type":"exact"},{"name":"clostripain activity","type":"exact"}],"termid":"GO:0051404"}


id: MONDO:0042982
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder arising from deficiency in the GATA2 with a wide spectrum of phenotypes. Autosomal dominant mutations of GATA2 cause a haploinsufficiency, which, in consequence, cause individuals to develop hematological, immunological, lymphatic, or other presentations. These often progress to severe organ (e.g. lung) failure, opportunistic infections, myelodysplastic syndrome, and/or acute myeloid leukemia. The most common clinical denominator is the propensity for myeloid neoplasia (myelodysplastic syndrome [MDS], myeloproliferative neoplasms [MPN], chronic myelomonocytic leukemia [CMML], acute myeloid leukemia [AML]).","definition_xrefs":["PMID:25619630","PMID:25624456","PMID:28637621","PMID:25397911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"GATA2 deficiency with susceptibility to MDS/AML","secondary_identifiers":["NCIT:C126349"],"synonyms":[{"name":"GATA2 deficiency","type":"exact"},{"name":"GATA2 deficiency with susceptibility to MDS/AML","type":"exact"},{"name":"GATA2 deficiency/MonoMac syndrome","type":"narrow"}],"termid":"MONDO:0042982","xrefs":{"Monarch":{"xref_id":"0042982"}}}


id: PR:O74850
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A diacylglycerol O-acyltransferase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol O-acyltransferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.15","secondary_identifiers":["UniProtKB:O74850"],"synonyms":[{"name":"SPCC1235.15","type":"related"},{"name":"Spom972h-DGAT2","type":"exact"},{"name":"diglyceride acyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74850"}


id: PBO:0030599
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id: GO:0036370
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding a D-alanine and presenting it for processing or offloading to a cognate enzyme. Covalently binds the D-alanine via a phosphopantetheine prosthetic group and mediates protein-protein interactions with the enzyme conferring specificity. The carrier protein provides an essential link between the D-alanine-D-alanyl carrier protein ligase and the incorporation of D-alanine into lipoteichoic acid by transferring activated D-alanine to cell membrane phosphatidylglycerol (PG).","definition_xrefs":["PMID:22750871","GOC:crds","PMID:11222605","PMID:8682792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphopantetheine-dependent carrier activity","termid":"GO:0140414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140104"}],"interesting_parent_ids":["GO:0140104","GO:0003674"],"is_obsolete":false,"name":"D-alanyl carrier activity","synonyms":[{"name":"D-alanyl carrier protein","type":"related"}],"termid":"GO:0036370"}


id: GO:0050234
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine + pyrazole = 3-(pyrazol-1-yl)-L-alanine + H2O.","definition_xrefs":["RHEA:24512","EC:4.2.1.50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pyrazolylalanine synthase activity","secondary_identifiers":["KEGG_REACTION:R02378","MetaCyc:PYRAZOLYLALANINE-SYNTHASE-RXN"],"synonyms":[{"name":"L-serine hydro-lyase (adding pyrazole)","type":"related"},{"name":"L-serine hydro-lyase [adding pyrazole; 3-(pyrazol-1-yl)-L-alanine-forming]","type":"related"},{"name":"beta-pyrazolylalaninase activity","type":"related"}],"termid":"GO:0050234"}


id: GO:0034520
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-naphthaldehyde + NAD+ + H2O = 2-naphthoate + NADH + H+.","definition_xrefs":["UM-BBD_reactionID:r0772"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-naphthaldehyde dehydrogenase activity (obsolete GO:0034520)","termid":"GO:0034520"}


id: PBO:0090996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Atg8-interacting ER-phagy receptor Epr1","termid":"PBO:0090996"}


id: PBO:0044764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 47","termid":"PBO:0044764"}


id: GO:0097270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The temporary recovery of response to a stimulus when a novel stimulus is added.","definition_xrefs":["Wikipedia:Habituation","GOC:kmv","PMID:11390637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nonassociative learning","termid":"GO:0046958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dishabituation","termid":"GO:0097270"}


id: FYPO:0000081
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to conditions of high osmolarity.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to osmotic stress","termid":"FYPO:0000270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to high osmolarity","synonyms":[{"name":"decreased growth during cellular response to high osmolarity","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to high osmolarity","type":"exact"},{"name":"hyperosmotic stress resistance: decreased","type":"related"},{"name":"hypersensitive to high osmolarity","type":"exact"},{"name":"sensitive to high osmolarity during mitotic cell cycle","type":"related"},{"name":"sensitive to high osmolarity during vegetative growth","type":"exact"},{"name":"sensitive to hyperosmotic conditions","type":"exact"}],"termid":"FYPO:0000081"}


id: PBO:0091859
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the S. japonicus gene is about 500 amino acids longer...possibly a gene merge in S. japonicus as this does not splice to adjacent gene","termid":"PBO:0091859"}


id: PBO:0083439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YOR365C","termid":"PBO:0083439"}


id: MONDO:0006274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intraepithelial lesion of the vulvar squamous epithelium that represents the clinical and morphological manifestation of a productive HPV infection. Low grade refers to the associated low risk of concurrent or future cancer. (WHO, 2014)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar intraepithelial neoplasia","termid":"MONDO:0005198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low grade vulvar intraepithelial neoplasia","secondary_identifiers":["NCIT:C4760","UMLS:C0495106","EFO:1000330","MEDGEN:99217"],"synonyms":[{"name":"VIN 1","type":"exact"},{"name":"VIN 1 of usual type","type":"exact"},{"name":"VIN grade 1","type":"exact"},{"name":"grade 1 VIN","type":"exact"},{"name":"grade 1 vulvar intraepithelial neoplasia","type":"exact"},{"name":"grade I VIN","type":"exact"},{"name":"grade I vulvar intraepithelial neoplasia","type":"exact"},{"name":"intraepithelial neoplasia of the vulva grade 1","type":"exact"},{"name":"intraepithelial neoplasia of vulva grade 1","type":"exact"},{"name":"low grade VIN","type":"exact"},{"name":"vulva intraepithelial neoplasia grade 1","type":"exact"},{"name":"vulvar Low grade squamous intraepithelial lesion","type":"exact"},{"name":"vulvar Low-grade squamous intraepithelial lesion","type":"exact"},{"name":"vulvar flat condyloma","type":"exact"},{"name":"vulvar intraepithelial neoplasia 1 of usual type","type":"exact"},{"name":"vulvar intraepithelial neoplasia grade 1","type":"exact"},{"name":"vulvar mild squamous dysplasia","type":"exact"}],"termid":"MONDO:0006274","xrefs":{"Monarch":{"xref_id":"0006274"}}}


id: PR:Q10104
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine hydroxymethyltransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00915","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine hydroxymethyltransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.04c","secondary_identifiers":["UniProtKB:Q10104"],"synonyms":[{"name":"SHMT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SHMT2","type":"exact"},{"name":"glycine hydroxymethyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"serine methylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10104"}


id: PBO:0041814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronary artery disease region linked MFGE8 regulatory lncRNA","termid":"PBO:0041814"}


id: GO:0007407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in the morphology or behavior of a neuroblast resulting from exposure to an activating factor such as a cellular or soluble ligand.","definition_xrefs":["GOC:go_curators","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation","termid":"GO:0001775"},{"relation_name":"part_of","term_name":"generation of neurons","termid":"GO:0048699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroblast activation","secondary_identifiers":["GO:0043351","GO:0043352"],"termid":"GO:0007407"}


id: PBO:0078579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 53B, pseudogene","termid":"PBO:0078579"}


id: GO:0080150
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoate + S-adenosyl-L-methionine = methylbenzoate + S-adenosyl-L-homocysteine.","definition_xrefs":["MetaCyc:RXN-6722","PMID:10852939"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"S-adenosyl-L-methionine:benzoic acid carboxyl methyl transferase activity","secondary_identifiers":["RHEA:36099"],"synonyms":[{"name":"S-adenosyl-L-methionine:benzoate carboxyl methyltransferase activity","type":"exact"}],"termid":"GO:0080150"}


id: PBO:0091872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extender of chronological lifespan protein Ecl3","termid":"PBO:0091872"}


id: GO:0042655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The initiation of the activity of the inactive enzyme JUN kinase kinase kinase (JNKKK) activity.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of JNKKK activity (obsolete GO:0042655)","synonyms":[{"name":"activation of JUN kinase kinase kinase activity","type":"exact"},{"name":"positive regulation of JUNKKK activity","type":"broad"}],"termid":"GO:0042655"}


id: MONDO:0011089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Patent ductus venosus (PDV) is an extremely rare form of congenital portosystemic shunt that results in the diversion of portal blood into the systemic circulation. Failure of DV closure after birth leads to PDV. PDV results in portal venous blood bypassing the liver and directly entering the systemic circulation, decreasing hepatic blood flow and increasing blood volume and toxic substances in the systemic circulation.","definition_xrefs":["PMID:36329968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"congenital portosystemic shunt","termid":"MONDO:0018811"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patent ductus venosus","secondary_identifiers":["OMIM:601466","SCTID:253330006","UMLS:C0344688","MESH:C562830","MEDGEN:91033","ICD9:747.49"],"synonyms":[{"name":"PDV","type":"related"},{"name":"PSVS","type":"related"},{"name":"patent ductus venosus","type":"exact"},{"name":"portosystemic Venous shunt, congenital","type":"related"}],"termid":"MONDO:0011089","xrefs":{"Monarch":{"xref_id":"0011089"}}}


id: PBO:0047118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 166 member A","termid":"PBO:0047118"}


id: PBO:0117261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Pam17","termid":"PBO:0117261"}


id: PBO:0048382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated RAB2 interactor family member 5B","termid":"PBO:0048382"}


id: PBO:0113280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pleiotropic negative transcriptional regulator; involved in Ras-cAMP and lysine biosynthetic pathways and nitrogen regulation; involved in retrograde (RTG) mitochondria-to-nucleus signaling","termid":"PBO:0113280"}


id: PBO:0065974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD54 like","termid":"PBO:0065974"}


id: PBO:0074883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 62A","termid":"PBO:0074883"}


id: GO:1903762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cardiac_conduct_nov11","PMID:18337493","GOC:BHF","GO_REF:0000059","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization (obsolete GO:1903762)","synonyms":[{"name":"activation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"activation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"activation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","type":"narrow"},{"name":"activation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"activation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"positive regulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"positive regulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"positive regulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"positive regulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"up regulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"up regulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"up regulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","type":"exact"},{"name":"up regulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"up regulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"up-regulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"up-regulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"up-regulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","type":"exact"},{"name":"up-regulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"up-regulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"upregulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"upregulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"upregulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","type":"exact"},{"name":"upregulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"upregulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"}],"termid":"GO:1903762"}


id: GO:0035471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by luteinizing hormone binding to a receptor, where the activated receptor signals via downstream effectors that contribute to progression of the ovarian follicle over time, from its formation to the mature structure.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"luteinizing hormone signaling pathway","termid":"GO:0042700"},{"relation_name":"part_of","term_name":"ovarian follicle development","termid":"GO:0001541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"luteinizing hormone signaling pathway involved in ovarian follicle development","synonyms":[{"name":"luteinizing hormone signalling pathway involved in ovarian follicle development","type":"exact"}],"termid":"GO:0035471"}


id: PBO:0081482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 362","termid":"PBO:0081482"}


id: FYPO:0005932
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is lower than normal at long terminal repeat (LTR) regions. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:25798942","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased nucleosome occupancy","termid":"FYPO:0004491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000641"],"is_obsolete":false,"name":"decreased nucleosome occupancy at long terminal repeat","synonyms":[{"name":"decreased nucleosome occupancy at LTR","type":"exact"},{"name":"decreased nucleosome occupancy at long terminal repeat during mitotic cell cycle","type":"related"},{"name":"decreased nucleosome occupancy at long terminal repeat during vegetative growth","type":"exact"},{"name":"decreased nucleosome occupancy in long terminal repeat","type":"exact"},{"name":"reduced nucleosome occupancy at long terminal repeat","type":"exact"}],"termid":"FYPO:0005932"}


id: MONDO:0016111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-dystrophic myopathy with collagen 6 anomaly (obsolete MONDO:0016111)","secondary_identifiers":["Orphanet:206659"],"termid":"MONDO:0016111","xrefs":{"Monarch":{"xref_id":"0016111"}}}


id: MONDO:0008518
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A synostosis characterized by the fusion of carpal and tarsal bones, which causes stiffness and immobility of the hands and the feet.","definition_xrefs":["DOID:14762"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"tarsal-carpal coalition syndrome","termid":"MONDO:0008521"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"synostosis","termid":"MONDO:0001411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0000426"],"is_obsolete":false,"name":"calcaneonavicular coalition","secondary_identifiers":["GARD:9863","SCTID:62628008","UMLS:C1876184","ICD9:755.8","MEDGEN:360296","MESH:C538156","OMIM:186400"],"synonyms":[{"name":"calcaneonavicular coalition","type":"exact"},{"name":"multiple synostosis syndrome","type":"exact"},{"name":"synostoses, tarsal, carpal and digital","type":"exact"},{"name":"synostoses, tarsal, carpal, and digital","type":"related"}],"termid":"MONDO:0008518","xrefs":{"Monarch":{"xref_id":"0008518"}}}


id: GO:0033312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the formation of chlorophyll a, via the intermediate geranylgeranyl-chlorophyll a.","definition_xrefs":["MetaCyc:PWY-5064","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorophyll a biosynthetic process","termid":"GO:0033305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"chlorophyll a biosynthetic process via geranylgeranyl-chlorophyll a","synonyms":[{"name":"chlorophyll a anabolism via geranylgeranyl-chlorophyll a","type":"exact"},{"name":"chlorophyll a biosynthesis via geranylgeranyl-chlorophyll a","type":"exact"},{"name":"chlorophyll a formation via geranylgeranyl-chlorophyll a","type":"exact"},{"name":"chlorophyll a synthesis via geranylgeranyl-chlorophyll a","type":"exact"}],"termid":"GO:0033312"}


id: GO:0061678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular carbohydrate catabolic process that converts a carbohydrate to pyruvate and either glyceraldehyde or glyceraldehyde-3 phosphate by dehydration and aldol cleavage via a gluconate or 6-phosphogluconate intermediate.","definition_xrefs":["GOC:dph","PMID:12921536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate metabolic process","termid":"GO:0006090"},{"relation_name":"is_a","term_name":"carbohydrate catabolic process","termid":"GO:0016052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"Entner-Doudoroff pathway","secondary_identifiers":["MetaCyc:Entner-Doudoroff-Pathways"],"termid":"GO:0061678"}


id: PBO:0113472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TORC2, a regulator of plasma membrane (PM) homeostasis; TORC2 also regulates actin cytoskeletal dynamics during polarized growth and cell wall integrity; interacts with Slm1p and Slm2p, homologous PH domain-containing TORC2 substrates; BIT2 has a paralog, BIT61, that arose from the whole genome duplication","termid":"PBO:0113472"}


id: GO:0010526
data:
  {"annotated_genes":["SJAG_00769"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141005"}]},"cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of transposable element expression. Includes both DNA transposons and retrotransposons.","definition_xrefs":["GOC:dph","PMID:32823517","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gene expression, epigenetic","termid":"GO:0045814"},{"relation_name":"negatively_regulates","term_name":"retrotransposition","termid":"GO:0032197"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00769":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006325"],"is_obsolete":false,"name":"transposable element silencing","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Retrotransposon_silencing"],"synonyms":[{"name":"negative regulation of transposition, RNA-mediated","type":"exact"},{"name":"retrotransposon silencing","type":"narrow"}],"termid":"GO:0010526","terms_by_termid":{"GO:0141005":null}}


id: GO:0072201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of mesenchymal cell proliferation. A mesenchymal cell is a cell that normally gives rise to other cells that are organized as three-dimensional masses, rather than sheets.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell proliferation","termid":"GO:0010464"},{"relation_name":"negatively_regulates","term_name":"mesenchymal cell proliferation","termid":"GO:0010463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesenchymal cell proliferation","termid":"GO:0072201"}


id: GO:1990698
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a palmitoleoyl group, a 16-carbon monounsaturated fatty acid (C16:1), to an acceptor molecule.","definition_xrefs":["PMID:17141155","PMID:25731175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"palmitoleoyltransferase activity","termid":"GO:1990698"}


id: PBO:0086356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative 1,3-beta-glucanosyltransferase; has similarity go other GAS family members; low abundance, possibly inactive member of the GAS family of GPI-containing proteins; localizes to the cell wall; mRNA induced during sporulation","termid":"PBO:0086356"}


id: GO:0017103
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-galactose 1-phosphate + UTP = diphosphate + UDP-D-galactose.","definition_xrefs":["EC:2.7.7.10","RHEA:14209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UTP-monosaccharide-1-phosphate uridylyltransferase activity","termid":"GO:0051748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016779","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"UTP:galactose-1-phosphate uridylyltransferase activity","secondary_identifiers":["GO:0003982","KEGG_REACTION:R00502","MetaCyc:UTPHEXPURIDYLYLTRANS-RXN"],"synonyms":[{"name":"Gal-1-P uridylyltransferase activity","type":"broad"},{"name":"UDPgalactose pyrophosphorylase activity","type":"related"},{"name":"UTP-hexose-1-phosphate uridylyltransferase activity","type":"related"},{"name":"UTP:alpha-D-hexose-1-phosphate uridylyltransferase activity","type":"related"},{"name":"UTP:hexose-1-phosphate uridylyltransferase activity","type":"broad"},{"name":"alpha-D-galactose 1-phosphate uridylyltransferase activity","type":"related"},{"name":"galactose 1-phosphate uridyltransferase activity","type":"related"},{"name":"galactose 1-phosphate uridylyltransferase activity","type":"related"},{"name":"galactose-1-phosphate uridylyltransferase activity","type":"broad"},{"name":"uridine diphosphate galactose pyrophosphorylase activity","type":"related"},{"name":"uridine diphosphogalactose pyrophosphorylase activity","type":"related"}],"termid":"GO:0017103"}


id: GO:0030583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the myxococcal fruiting body over time, from its formation to the mature structure. The process begins when myxococci respond to a lack of nutrients in the environment and ends when the myxococcal fruiting body is a mature structure.","definition_xrefs":["GOC:mtg_sensu","ISBN:0815316194","PMID:11121786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"},{"relation_name":"is_a","term_name":"response to starvation","termid":"GO:0042594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myxococcal fruiting body development","secondary_identifiers":["GO:0055084"],"synonyms":[{"name":"fruiting body development in cellular response to starvation","type":"broad"},{"name":"fruiting body development in response to starvation","type":"broad"}],"termid":"GO:0030583"}


id: PBO:0078559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 47","termid":"PBO:0078559"}


id: FYPO:0006927
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the ratio of the nuclear volume to the total cell volume is lower than normal (the ration observed in wild type is approximately 0.076-0.089).","definition_xrefs":["PomBase:mah","PMID:31015410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased nucleus:cytoplasm ratio","synonyms":[{"name":"decreased nuclear:cytoplasmic ratio","type":"exact"},{"name":"decreased nuclear:cytoplasmic volume ratio","type":"exact"},{"name":"decreased nucleus:cell volume ratio","type":"exact"},{"name":"decreased nucleus:cytoplasm ratio during mitotic cell cycle","type":"related"},{"name":"decreased nucleus:cytoplasm ratio during vegetative growth","type":"exact"},{"name":"decreased nucleus:cytoplasm volume ratio","type":"exact"},{"name":"reduced nucleus:cytoplasm ratio","type":"exact"}],"termid":"FYPO:0006927"}


id: GO:0019973
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-13.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"interleukin-13 binding","synonyms":[{"name":"IL-13 binding","type":"exact"}],"termid":"GO:0019973"}


id: MONDO:1011647
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic valvular disease, non-human animal","secondary_identifiers":["OMIA:001246"],"termid":"MONDO:1011647","xrefs":{"Monarch":{"xref_id":"1011647"}}}


id: PBO:0079584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 C pseudogene 5","termid":"PBO:0079584"}


id: GO:0032540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of any behavior associated with finding a host organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of host-seeking behavior","termid":"GO:0032538"},{"relation_name":"is_a","term_name":"positive regulation of behavior","termid":"GO:0048520"},{"relation_name":"positively_regulates","term_name":"host-seeking behavior","termid":"GO:0032537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of host-seeking behavior","synonyms":[{"name":"activation of host-seeking behavior","type":"narrow"},{"name":"positive regulation of host-seeking behaviour","type":"exact"},{"name":"stimulation of host-seeking behavior","type":"narrow"},{"name":"up regulation of host-seeking behavior","type":"exact"},{"name":"up-regulation of host-seeking behavior","type":"exact"},{"name":"upregulation of host-seeking behavior","type":"exact"}],"termid":"GO:0032540"}


id: PBO:0068551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 2, pseudogene","termid":"PBO:0068551"}


id: GO:0052076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the ethylene-mediated defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host ethylene-mediated defense response (obsolete GO:0052076)","synonyms":[{"name":"activation by symbiont of host ethylene-mediated defense response","type":"narrow"},{"name":"positive regulation by organism of defense-related ethylene-mediated signal transduction pathway in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by organism of ethylene-mediated defense response of other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by symbiont of defense-related host ethylene-mediated signal transduction pathway","type":"broad"},{"name":"positive regulation by symbiont of host ethylene-mediated defense response","type":"exact"},{"name":"stimulation by symbiont of host ethylene-mediated defense response","type":"narrow"},{"name":"up regulation by symbiont of host ethylene-mediated defense response","type":"exact"},{"name":"up-regulation by symbiont of host ethylene-mediated defense response","type":"exact"},{"name":"upregulation by symbiont of host ethylene-mediated defense response","type":"exact"}],"termid":"GO:0052076"}


id: PBO:0032721
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_from_MCB_promoter","termid":"PBO:0032721"}


id: GO:1901038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cyanidin 3-O-beta-D-glucoside.","definition_xrefs":["GOC:TermGenie","PMID:21899608"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid metabolic process","termid":"GO:0009812"},{"relation_name":"is_a","term_name":"beta-glucoside metabolic process","termid":"GO:1901804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cyanidin 3-O-glucoside metabolic process","synonyms":[{"name":"cyanidin 3-O-beta-D-glucoside metabolic process","type":"exact"},{"name":"cyanidin 3-O-beta-D-glucoside metabolism","type":"exact"}],"termid":"GO:1901038"}


id: PBO:0071089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 91","termid":"PBO:0071089"}


id: MONDO:1012192
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurological syndrome, non-human animal","termid":"MONDO:1011853"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurological syndrome, horse","secondary_identifiers":["OMIA:000720-9796"],"termid":"MONDO:1012192","xrefs":{"Monarch":{"xref_id":"1012192"}}}


id: MONDO:0009514
data:
  {"annotated_genes":["SJAG_04110"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87279],"is_not":false,"summary":null,"term":"MONDO:0009514"}]},"cv_name":"mondo","definition":"A very rare genetic multisystemic disorder characterized by pituitary dysfunction, ataxia, peripheral neuropathy, spastic paraplegia, and chorioretinal dystrophy.","definition_xrefs":["Orphanet:2377"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"congenital hypogonadotropic hypogonadism","termid":"MONDO:0015770"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04110":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Laurence-Moon syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:458834940","MEDGEN:44078","GARD:12635","SCTID:232059000","NORD:1932","SCTID:5619004","DOID:1930","ICD9:253.4","MESH:D007849","MedDRA:10056710","OMIM:245800","UMLS:C0023138","NCIT:C34760"],"synonyms":[{"name":"LMS","type":"exact"},{"name":"LNMS","type":"related"},{"name":"Laurence-MOON syndrome","type":"related"},{"name":"Laurence-Moon syndrome","type":"exact"},{"name":"Laurence-Moon-Biedl syndrome","type":"related"}],"termid":"MONDO:0009514","terms_by_termid":{"MONDO:0009514":null},"xrefs":{"Monarch":{"xref_id":"0009514"}}}


id: MONDO:0005944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Virus diseases caused by rhabdoviridae. Important infections include rabies; ephemeral fever; and vesicular stomatitis.","definition_xrefs":["MESH:D018353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mononegavirales infectious disease","termid":"MONDO:0005856"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rhabdoviridae infectious disease","secondary_identifiers":["MEDGEN:60221","EFO:0007469","UMLS:C0206751"],"synonyms":[{"name":"Rhabdoviridae infection","type":"related"},{"name":"infection, Rhabdoviridae","type":"related"},{"name":"infections, Rhabdoviridae","type":"related"}],"termid":"MONDO:0005944","xrefs":{"Monarch":{"xref_id":"0005944"}}}


id: GO:0007123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete bud scar accumulation (obsolete GO:0007123)","synonyms":[{"name":"bud scar accumulation","type":"exact"}],"termid":"GO:0007123"}


id: GO:0035074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The act of becoming a pupa, a resting stage in the life cycle of organisms with complete metamorphosis. This event marks the end of the prepupal period and the beginning of the pupal period.","definition_xrefs":["ISBN:0582227089","GOC:bf","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"pupal development","termid":"GO:0035209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pupation","secondary_identifiers":["Wikipedia:Pupa"],"synonyms":[{"name":"head eversion","type":"exact"},{"name":"prepupal-pupal transition","type":"exact"}],"termid":"GO:0035074"}


id: GO:0102237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-trans,-6-trans-farnesol + ATP = 2-trans,-6-trans-farnesyl monophosphate + ADP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete ATP:farnesol kinase activity (obsolete GO:0102237)","synonyms":[{"name":"ATP-dependent farnesol kinase activity","type":"related"}],"termid":"GO:0102237"}


id: GO:2000783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of establishment of cell polarity regulating cell shape.","definition_xrefs":["GOC:Mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of establishment or maintenance of cell polarity regulating cell shape","termid":"GO:2000770"},{"relation_name":"is_a","term_name":"regulation of establishment of cell polarity regulating cell shape","termid":"GO:2000782"},{"relation_name":"negatively_regulates","term_name":"establishment of cell polarity regulating cell shape","termid":"GO:0071964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"negative regulation of establishment of cell polarity regulating cell shape","termid":"GO:2000783"}


id: FYPO:0002026
data:
  {"alleles_by_uniquename":{"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121375],"is_not":false,"summary":null,"term":"FYPO:0002026"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell forms an actomyosin contractile ring that is perpendicular to the long axis of the cell, but is not located at the midpoint of the long axis.","definition_xrefs":["PMID:8834798","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized actomyosin contractile ring","termid":"FYPO:0001369"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02392":null},"genotype_count":1,"genotypes_by_uniquename":{"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0000002","FYPO:0001985","FYPO:0000032","FYPO:0000631","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"actomyosin contractile ring displaced from midpoint","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_02392"],"single_locus_genotype_uniquenames":["pom1delta"],"synonyms":[{"name":"actomyosin contractile ring displaced from cell center","type":"exact"},{"name":"actomyosin contractile ring displaced from cell centre","type":"exact"},{"name":"actomyosin contractile ring displaced from cell midpoint","type":"exact"},{"name":"actomyosin contractile ring displaced from midpoint during mitotic cell cycle","type":"related"},{"name":"actomyosin contractile ring displaced from midpoint during vegetative growth","type":"exact"},{"name":"cytokinetic contractile ring displaced from midpoint","type":"exact"}],"termid":"FYPO:0002026","terms_by_termid":{"FYECO:0000162":null,"FYPO:0002026":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PR:P78804
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An NADP-specific glutamate dehydrogenase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04676","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP-specific glutamate dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.12c","secondary_identifiers":["UniProtKB:P78804"],"synonyms":[{"name":"NADP-GDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NADP-dependent glutamate dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gdhA","type":"exact"}],"termid":"PR:P78804"}


id: PBO:0047778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box D1","termid":"PBO:0047778"}


id: FYECO:0000344
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which manganese sulfate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ MnSO4","synonyms":[{"name":"+ manganese sulfate","type":"exact"}],"termid":"FYECO:0000344"}


id: GO:0009242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of colanic acid, a capsular bacterial polysaccharide.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"is_a","term_name":"colanic acid metabolic process","termid":"GO:0046377"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"colanic acid biosynthetic process","secondary_identifiers":["MetaCyc:COLANSYN-PWY"],"synonyms":[{"name":"M antigen biosynthesis","type":"exact"},{"name":"M antigen biosynthetic process","type":"exact"},{"name":"colanic acid anabolism","type":"exact"},{"name":"colanic acid biosynthesis","type":"exact"},{"name":"colanic acid formation","type":"exact"},{"name":"colanic acid synthesis","type":"exact"}],"termid":"GO:0009242"}


id: PBO:0091094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic and meiotic spindle pole body protein, gamma tubulin complex linker-related Spo15","termid":"PBO:0091094"}


id: PATO:0000618
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's having two sides; two-sided.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bilateral","termid":"PATO:0000618"}


id: PBO:0066049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAP1 GTPase activating protein 2","termid":"PBO:0066049"}


id: GO:0031413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates an organism's tendency or ability to rise or float in a fluid medium such as water or air, often through the use of stored gases.","definition_xrefs":["GOC:mah","PATO:0001420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological regulation","termid":"GO:0065007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of buoyancy","synonyms":[{"name":"buoyancy regulation","type":"exact"}],"termid":"GO:0031413"}


id: GO:0032564
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to dATP, deoxyadenosine triphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenyl deoxyribonucleotide binding","termid":"GO:0032558"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"dATP binding","termid":"GO:0032564"}


id: PBO:0082617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of 90S preribosomes; involved in early cleavages of the 35S pre-rRNA and in production of the 40S ribosomal subunit","termid":"PBO:0082617"}


id: GO:0007533
data:
  {"annotated_genes":["SJAG_02460","SJAG_03097","SJAG_00320","SJAG_02828","SJAG_03221","SJAG_01076","SJAG_00399","SJAG_02319","SJAG_00073","SJAG_02079","SJAG_01068","SJAG_03006","SJAG_01601","SJAG_00293","SJAG_01419","SJAG_01495","SJAG_02556","SJAG_00769","SJAG_00247","SJAG_05239","SJAG_00757","SJAG_02724","SJAG_01677","SJAG_02226","SJAG_03997","SJAG_02401","SJAG_01465","SJAG_01410"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94490,98463,100870],"is_not":false,"summary":null,"term":"GO:0007533"},{"annotations":[93050,118068,118396,120723,95200,100931,118708,89745],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007535"},{"annotations":[120642,91107,116882,108465,102399,99233,89746,90980,97993,107899,112147,112670,118661,100932,110351],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007534"},{"annotations":[110352,61316,95891,104777],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071515"},{"annotations":[95165],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071171"}]},"cv_name":"biological_process","definition":"The conversion of a single-cell organism from one mating type to another by the precise replacement of a DNA sequence at the expressed mating type locus with a copy of a sequence from a donor locus.","definition_xrefs":["PMID:9928492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating type determination","termid":"GO:0007531"},{"relation_name":"is_a","term_name":"reproductive process in single-celled organism","termid":"GO:0022413"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00073":null,"SJAG_00247":null,"SJAG_00293":null,"SJAG_00320":null,"SJAG_00399":null,"SJAG_00757":null,"SJAG_00769":null,"SJAG_01068":null,"SJAG_01076":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01465":null,"SJAG_01495":null,"SJAG_01601":null,"SJAG_01677":null,"SJAG_02079":null,"SJAG_02226":null,"SJAG_02319":null,"SJAG_02401":null,"SJAG_02460":null,"SJAG_02556":null,"SJAG_02724":null,"SJAG_02828":null,"SJAG_03006":null,"SJAG_03097":null,"SJAG_03221":null,"SJAG_03997":null,"SJAG_05239":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mating type switching","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"mating type switching and recombination","type":"related"}],"termid":"GO:0007533","terms_by_termid":{"GO:0007533":null,"GO:0007534":null,"GO:0007535":null,"GO:0071171":null,"GO:0071515":null}}


id: MOD:00068
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-myristoylglycine.","definition_xrefs":["PubMed:6436247","PubMed:7543369","RESID:AA0059","Unimod:45#G","PubMed:1326520","OMSSA:80","PubMed:11955007","PubMed:11955008","PubMed:1386601"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-myristoylated residue","termid":"MOD:00650"},{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"N-myristoylglycine","synonyms":[{"name":"(tetradecanoylamino)ethanoic acid","type":"exact"},{"name":"LIPID N-myristoyl glycine","type":"exact"},{"name":"Myristoyl","type":"related"},{"name":"Myristoylation","type":"related"},{"name":"N-(1-oxotetradecyl)glycine","type":"exact"},{"name":"N-(C14:0 aliphatic acyl)glycine","type":"exact"},{"name":"N-myristoyl-glycine","type":"exact"},{"name":"N-myristoylated glycine","type":"exact"},{"name":"N-myristylglycine","type":"exact"},{"name":"N-tetradecanoylglycine","type":"exact"},{"name":"NMyrGly","type":"exact"},{"name":"ntermpepmyristoylationg","type":"exact"}],"termid":"MOD:00068"}


id: GO:1903920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of actin filament severing.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:als","PMID:23325791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of actin filament severing","termid":"GO:1903918"},{"relation_name":"positively_regulates","term_name":"actin filament severing","termid":"GO:0051014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of actin filament severing","synonyms":[{"name":"activation of F-actin severing","type":"narrow"},{"name":"activation of actin filament severing","type":"narrow"},{"name":"activation of actin filament severing activity","type":"related"},{"name":"activation of barbed-end actin capping/severing activity","type":"related"},{"name":"positive regulation of F-actin severing","type":"exact"},{"name":"positive regulation of actin filament severing activity","type":"related"},{"name":"positive regulation of barbed-end actin capping/severing activity","type":"related"},{"name":"up regulation of F-actin severing","type":"exact"},{"name":"up regulation of actin filament severing","type":"exact"},{"name":"up regulation of actin filament severing activity","type":"related"},{"name":"up regulation of barbed-end actin capping/severing activity","type":"related"},{"name":"up-regulation of F-actin severing","type":"exact"},{"name":"up-regulation of actin filament severing","type":"exact"},{"name":"up-regulation of actin filament severing activity","type":"related"},{"name":"up-regulation of barbed-end actin capping/severing activity","type":"related"},{"name":"upregulation of F-actin severing","type":"exact"},{"name":"upregulation of actin filament severing","type":"exact"},{"name":"upregulation of actin filament severing activity","type":"related"},{"name":"upregulation of barbed-end actin capping/severing activity","type":"related"}],"termid":"GO:1903920"}


id: MONDO:0000691
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pain disorder (obsolete MONDO:0000691)","termid":"MONDO:0000691","xrefs":{"Monarch":{"xref_id":"0000691"}}}


id: MONDO:0022412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete albinism immunodeficiency (obsolete MONDO:0022412)","termid":"MONDO:0022412","xrefs":{"Monarch":{"xref_id":"0022412"}}}


id: GO:0019760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae. They are metabolized to a variety of toxic products which are most likely the cause of hepatocytic necrosis in animals and humans.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-glycoside metabolic process","termid":"GO:0016143"},{"relation_name":"is_a","term_name":"oxoacid metabolic process","termid":"GO:0043436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"glucosinolate metabolic process","synonyms":[{"name":"glucosinolate metabolism","type":"exact"}],"termid":"GO:0019760"}


id: PBO:0024482
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STaurosporine Supersensitive","termid":"PBO:0024482"}


id: RO:0002374
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x has_fused_element y iff: there exists some z : x has_part z, z homologous_to y, and y is a distinct element, the boundary between x and z is largely fiat","direct_ancestors":[{"relation_name":"is_a","term_name":"evolutionarily_related_to","termid":"RO:0002320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_fused_element","termid":"RO:0002374"}


id: MOD:01015
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that inserts or replaces a residue with an isovaline.","definition_xrefs":["DeltaMass:110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unnatural residue","termid":"MOD:00850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isovaline residue (Iva)","synonyms":[{"name":"2-amino-2-methylbutanoic acid","type":"exact"},{"name":"Isovalyl (-I-,-Iva-)","type":"exact"},{"name":"Iva","type":"exact"}],"termid":"MOD:01015"}


id: PBO:0053611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 645","termid":"PBO:0053611"}


id: PBO:0059571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1 pseudogene 3","termid":"PBO:0059571"}


id: PBO:0030152
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_mercury","termid":"PBO:0030152"}


id: MONDO:0011434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"psoriasis, susceptibility to","termid":"MONDO:0100171"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psoriasis 5, susceptibility to","secondary_identifiers":["OMIM:604316","DOID:0111282","MEDGEN:347660","UMLS:C1858536"],"synonyms":[{"name":"PSORS5","type":"exact"},{"name":"psoriasis 5, susceptibility to","type":"exact"},{"name":"psoriasis susceptibility 5","type":"exact"}],"termid":"MONDO:0011434","xrefs":{"Monarch":{"xref_id":"0011434"}}}


id: PBO:0072980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 3A member 1","termid":"PBO:0072980"}


id: PBO:0060851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIMA related kinase 2","termid":"PBO:0060851"}


id: MONDO:0002554
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign tumor derived from schwann cells of the peripheral sympathetic nervous system, including the sympathetic plexus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autonomic nervous system neoplasm","termid":"MONDO:0002366"},{"relation_name":"is_a","term_name":"schwannoma","termid":"MONDO:0002546"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sympathetic neurilemmoma","secondary_identifiers":["NCIT:C5421","MEDGEN:236964","DOID:3201","UMLS:C1336543"],"synonyms":[{"name":"sympathetic schwannoma","type":"exact"}],"termid":"MONDO:0002554","xrefs":{"Monarch":{"xref_id":"0002554"}}}


id: GO:0018235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-lysine to form peptidyl-N6-carboxy-L-lysine.","definition_xrefs":["RESID:AA0114"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lysine carboxylation (obsolete GO:0018235)","termid":"GO:0018235"}


id: PBO:0059674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 40","termid":"PBO:0059674"}


id: PBO:0003674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional coactivator, multiprotein bridging factor Mbf1 (predicted)","termid":"PBO:0003674"}


id: MONDO:0017681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete erythrokeratoderma variabilis progressiva (obsolete MONDO:0017681)","termid":"MONDO:0017681","xrefs":{"Monarch":{"xref_id":"0017681"}}}


id: FYPO:0002553
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which double-strand break processing is abnormal. Double-strand break processing is the 5' to 3' exonucleolytic resection of the DNA at the site of the break to form a 3' single-strand DNA overhang.","definition_xrefs":["PomBase:mah","GO:0000729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal double-strand break repair during vegetative growth","termid":"FYPO:0000777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000293","FYPO:0000298","FYPO:0000002"],"is_obsolete":false,"name":"abnormal double-strand break processing","synonyms":[{"name":"abnormal DSB processing","type":"exact"},{"name":"abnormal double-strand break processing during mitotic cell cycle","type":"related"},{"name":"abnormal double-strand break processing during vegetative growth","type":"exact"}],"termid":"FYPO:0002553"}


id: PBO:0062600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily K member 1","termid":"PBO:0062600"}


id: MONDO:0002613
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by an enduring pattern of excessively intense and superficial emotionality, attention seeking behavior, seductive appearance and speech, self dramatization and/or theatrical behavior.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"personality disorder","termid":"MONDO:0002028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histrionic personality disorder","secondary_identifiers":["icd11.foundation:953661315","NCIT:C92634","DOID:334","ICD10CM:F60.4","ICD9:301.5","MESH:D006677","ICD9:301.50","MEDGEN:9276","ICD9:301.59","SCTID:55341008","HP:0012077","UMLS:C0019681"],"synonyms":[{"name":"histrionic personality disorder","type":"exact"},{"name":"histrionic personality disorder (disease)","type":"exact"}],"termid":"MONDO:0002613","xrefs":{"Monarch":{"xref_id":"0002613"}}}


id: PR:O94598
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec5 gene.","definition_xrefs":["UniProtKB:O94598","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component sec5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.10c","synonyms":[{"name":"Spom972h-sec5","type":"exact"}],"termid":"PR:O94598"}


id: PBO:0046924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 41 member C","termid":"PBO:0046924"}


id: PBO:0072262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS21 divergent transcript","termid":"PBO:0072262"}


id: PBO:0074500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNAP47 antisense RNA 1","termid":"PBO:0074500"}


id: FYPO:0001495
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is viable, is elongated, and contains more than one nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated multinucleate vegetative cell","termid":"FYPO:0000133"},{"relation_name":"is_a","term_name":"viable elongated vegetative cell","termid":"FYPO:0001492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000005","FYPO:0000032","FYPO:0000002","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"viable elongated multinucleate vegetative cell","synonyms":[{"name":"elongated multinucleate viable cell during vegetative growth","type":"exact"},{"name":"elongated multinucleate viable vegetative cell","type":"exact"},{"name":"viable elongated multinucleate vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001495"}


id: PBO:0031087
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-gene_expression_regulation_phenotype","termid":"PBO:0031087"}


id: MONDO:0043089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute posterior multifocal placoid pigment epitheliopathy (APMPPE) is an acquired, inflammatory eye condition affecting the retina, retinal pigment epithelium (pigmented layer of the retina), and choroid. It usually affects both eyes and is characterized by multiple, yellow-white lesions in the back of the eye. The condition can significantly impair visual acuity if the macula is involved. APMPPE typically resolves on its own in weeks to months. While the cause is unknown, about a third of cases appear to develop after a flu-like illness. Non-ocular symptoms are uncommon, but cerebral vasculitis can be present and may cause permanent and/or severe neurological complications.","definition_xrefs":["GARD:0002183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"},{"relation_name":"is_a","term_name":"multifocal choroiditis","termid":"MONDO:0023833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"acute posterior multifocal placoid pigment epitheliopathy","secondary_identifiers":["SCTID:89188001","UMLS:C0154884","ICD10CM:H30.14","GARD:2183","icd11.foundation:2036282532","NORD:1101","MEDGEN:56348"],"synonyms":[{"name":"AMPPE","type":"related"},{"name":"APMPPE","type":"related"},{"name":"Epitheliopathy, Acute Posterior Multifocal Placoid Pigment","type":"exact"},{"name":"acute multifocal placoid pigment epitheliopathy","type":"related"},{"name":"acute placoid pigment epitheliopathy","type":"related"},{"name":"acute posterior multifocal placoid pigment epitheliopathy","type":"exact"},{"name":"amppe - acute multifocal placoid pigment epitheliopathy","type":"related"},{"name":"apmppe","type":"related"},{"name":"epitheliopathy, acute posterior multifocal placoid pigment","type":"related"},{"name":"multifocal placoid pigment epitheliopathy","type":"related"},{"name":"pigment epitheliopathy, disseminated retinitis and retinochoroiditis","type":"related"}],"termid":"MONDO:0043089","xrefs":{"Monarch":{"xref_id":"0043089"}}}


id: GO:0061431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methionine stimulus.","definition_xrefs":["PMID:7891681","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nutrient","termid":"GO:0031670"},{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to methionine","termid":"GO:1904640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to methionine","termid":"GO:0061431"}


id: MONDO:0008064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasal bones, absence of","secondary_identifiers":["UMLS:C0339851","MEDGEN:90946","MESH:C562753","OMIM:161480"],"synonyms":[{"name":"nasal bones, absence of","type":"exact"}],"termid":"MONDO:0008064","xrefs":{"Monarch":{"xref_id":"0008064"}}}


id: PBO:0002935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box/WD repeat protein Pop2","termid":"PBO:0002935"}


id: PBO:0003309
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial myopathy","termid":"PBO:0003309"}


id: PBO:0027877
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_nucleosome_binding","termid":"PBO:0027877"}


id: GO:0006506
data:
  {"annotated_genes":["SJAG_03066","SJAG_03115","SJAG_01860","SJAG_04881","SJAG_00846","SJAG_01416","SJAG_03672","SJAG_00068","SJAG_04975","SJAG_04165","SJAG_03878","SJAG_06425","SJAG_02776","SJAG_00831","SJAG_00295","SJAG_02804","SJAG_02523","SJAG_04337","SJAG_01227","SJAG_02488","SJAG_02913","SJAG_04119","SJAG_06383","SJAG_03801","SJAG_01570","SJAG_05327","SJAG_05278","SJAG_04924","SJAG_03506","SJAG_03292"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58179,58431,58592,58606,61271,63415,64328,64535,71561,73629,74604,74881,75198,76707,77228,77244,78117,78165,78901,79211,79222,79384,79414,79641,80020,89244,91369,94809,105528,105590],"is_not":false,"summary":null,"term":"GO:0006506"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol group is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate group, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage.","definition_xrefs":["ISBN:0198547684","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GPI anchor metabolic process","termid":"GO:0006505"},{"relation_name":"is_a","term_name":"phosphatidylinositol biosynthetic process","termid":"GO:0006661"},{"relation_name":"is_a","term_name":"glycolipid biosynthetic process","termid":"GO:0009247"},{"relation_name":"part_of","term_name":"GPI anchored protein biosynthesis","termid":"GO:0180046"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00068":null,"SJAG_00295":null,"SJAG_00831":null,"SJAG_00846":null,"SJAG_01227":null,"SJAG_01416":null,"SJAG_01570":null,"SJAG_01860":null,"SJAG_02488":null,"SJAG_02523":null,"SJAG_02776":null,"SJAG_02804":null,"SJAG_02913":null,"SJAG_03066":null,"SJAG_03115":null,"SJAG_03292":null,"SJAG_03506":null,"SJAG_03672":null,"SJAG_03801":null,"SJAG_03878":null,"SJAG_04119":null,"SJAG_04165":null,"SJAG_04337":null,"SJAG_04881":null,"SJAG_04924":null,"SJAG_04975":null,"SJAG_05278":null,"SJAG_05327":null,"SJAG_06383":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0006629","GO:0010467"],"is_obsolete":false,"name":"GPI anchor biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0015998","Reactome:R-HSA-162710"],"synonyms":[{"name":"GPI anchor anabolism","type":"exact"},{"name":"GPI anchor biosynthesis","type":"exact"},{"name":"GPI anchor formation","type":"exact"},{"name":"GPI anchor synthesis","type":"exact"},{"name":"GPI/GSI anchor biosynthesis","type":"broad"},{"name":"GPI/GSI anchor biosynthetic process","type":"broad"},{"name":"glycosylphosphatidylinositol biosynthesis","type":"exact"},{"name":"glycosylphosphatidylinositol biosynthetic process","type":"exact"}],"termid":"GO:0006506","terms_by_termid":{"GO:0006506":null}}


id: GO:0047407
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP-ribosyl-[dinitrogen reductase] = adenosine diphosphate ribose + [dinitrogen reductase].","definition_xrefs":["EC:3.2.2.24","MetaCyc:3.2.2.24-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"ADP-ribosyl-[dinitrogen reductase] hydrolase activity","secondary_identifiers":["RHEA:14493"],"synonyms":[{"name":"ADP-D-ribosyl-dinitrogen reductase ADP-ribosylhydrolase activity","type":"related"},{"name":"ADP-ribosyl glycohydrolase activity","type":"related"},{"name":"ADP-ribosyl-dinitrogen reductase hydrolase activity","type":"related"},{"name":"azoferredoxin glycosidase activity","type":"related"},{"name":"azoferredoxin-activating enzymes","type":"related"},{"name":"dinitrogenase reductase activating glycohydrolase activity","type":"related"},{"name":"dinitrogenase reductase-activating glycohydrolase activity","type":"related"}],"termid":"GO:0047407"}


id: PBO:0047517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fasciculation and elongation protein zeta 2","termid":"PBO:0047517"}


id: PBO:0084659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondria-associated F-box protein; involved in maintenance of normal mitochondrial morphology; interacts with Skp1p through the F-box motif; preferentially localizes to the mother cell during budding","termid":"PBO:0084659"}


id: GO:0042868
data:
  {"annotated_genes":["SJAG_01717","SJAG_03745","SJAG_01176","SJAG_00266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109808],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0060195"},{"annotations":[72362,108097,90188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071040"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving antisense RNA, an RNA molecule complementary in sequence to another RNA or DNA molecule, which, by binding the latter, acts to inhibit its function and/or completion of synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_01176":null,"SJAG_01717":null,"SJAG_03745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antisense RNA metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"antisense RNA metabolism","type":"exact"}],"termid":"GO:0042868","terms_by_termid":{"GO:0060195":null,"GO:0071040":null}}


id: PBO:0081564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 488","termid":"PBO:0081564"}


id: MONDO:0017647
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete postinfectious autoimmune disease with chorea (obsolete MONDO:0017647)","secondary_identifiers":["Orphanet:306727"],"termid":"MONDO:0017647","xrefs":{"Monarch":{"xref_id":"0017647"}}}


id: PBO:0083994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutathione S-transferase capable of homodimerization; functional overlap with Gtt2p, Grx1p, and Grx2p; protein abundance increases in response to DNA replication stress","termid":"PBO:0083994"}


id: MONDO:0018239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete aggrecan-related bone disorder (obsolete MONDO:0018239)","secondary_identifiers":["Orphanet:364817"],"termid":"MONDO:0018239","xrefs":{"Monarch":{"xref_id":"0018239"}}}


id: PR:O74910
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- raf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rik1-associated factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC613.12c","synonyms":[{"name":"De-localization of swi6 protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-raf1","type":"exact"},{"name":"cryptic loci regulator 8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74910"}


id: MONDO:0700131
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sarcoma that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer, non-human animal","termid":"MONDO:1011828"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcoma, non-human animal","termid":"MONDO:0700131","xrefs":{"Monarch":{"xref_id":"0700131"}}}


id: PBO:0003093
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphogluconate dehydrogenase deficiency","termid":"PBO:0003093"}


id: MONDO:0060611
data:
  {"annotated_genes":["SJAG_04156","SJAG_00106"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86894,86895],"is_not":false,"summary":null,"term":"MONDO:0060611"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_04156":null},"genotype_count":0,"is_obsolete":false,"name":"combined immunodeficiency and megaloblastic anemia with or without hyperhomocysteinemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:658813","OMIM:617780","UMLS:C4540434","MEDGEN:1615364"],"synonyms":[{"name":"CIMAH","type":"related"},{"name":"combined immunodeficiency and megaloblastic anemia with or without hyperhomocysteinemia","type":"exact"},{"name":"methylenetetrahydrofolate dehydrogenase 1 deficiency","type":"related"}],"termid":"MONDO:0060611","terms_by_termid":{"MONDO:0060611":null},"xrefs":{"Monarch":{"xref_id":"0060611"}}}


id: PBO:0005553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epsin","termid":"PBO:0005553"}


id: PBO:0017910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMS complex subunit Mis13","termid":"PBO:0017910"}


id: PBO:0069061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 308, pseudogene","termid":"PBO:0069061"}


id: GO:0140399
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the reaction: 8-O-methylsterigmatocystin + 2 [reduced NADPH--hemoprotein reductase] + 2 O2 = aflatoxin B + 2 [oxidized NADPH--hemoprotein reductase] + H2O + methanol + CO2. Produces both aflatoxin B(1) and aflatoxin B(2).","definition_xrefs":["EC:1.14.14.117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"aflatoxin B synthase activity","termid":"GO:0140399"}


id: GO:0045501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the sevenless signaling pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of R7 cell differentiation","termid":"GO:0045676"},{"relation_name":"regulates","term_name":"sevenless signaling pathway","termid":"GO:0045500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of sevenless signaling pathway","synonyms":[{"name":"regulation of sev signaling pathway","type":"exact"},{"name":"regulation of sevenless signalling pathway","type":"exact"}],"termid":"GO:0045501"}


id: PBO:0109598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transvar_coordinates","termid":"PBO:0109598"}


id: GO:0008030
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a neuronal pentraxin and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:mah","GOC:signaling","PMID:18840757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentraxin receptor activity","termid":"GO:0008029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"neuronal pentraxin receptor activity","synonyms":[{"name":"neuronal pentaxin receptor","type":"exact"}],"termid":"GO:0008030"}


id: PBO:0049557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 19, pseudogene","termid":"PBO:0049557"}


id: MONDO:1011333
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mouth disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mouth disorder, non-human animal","termid":"MONDO:1011333","xrefs":{"Monarch":{"xref_id":"1011333"}}}


id: PBO:0056268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mastermind like domain containing 1","termid":"PBO:0056268"}


id: MONDO:0000214
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hypermanganesemia with dystonia","secondary_identifiers":["DOID:0080535","SCTID:768553002","MEDGEN:1632594","OMIMPS:613280","UMLS:C4708509"],"termid":"MONDO:0000214","xrefs":{"Monarch":{"xref_id":"0000214"}}}


id: MONDO:1012572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cancer that occurs in pigs.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer, non-human animal","termid":"MONDO:1011828"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer, pig","secondary_identifiers":["OMIA:002587-9823"],"termid":"MONDO:1012572","xrefs":{"Monarch":{"xref_id":"1012572"}}}


id: MONDO:0002755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A localized, clonal (malignant) plasma cell infiltrate in the bone, without peripheral blood involvement. The most commonly affected bones are the vertebrae, ribs, skull, pelvis and femur. X-rays examination reveals a solitary lytic lesion.","definition_xrefs":["NCIT:C7812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasmacytoma","termid":"MONDO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"solitary osseous plasmacytoma","secondary_identifiers":["DOID:3722","ONCOTREE:SPB","UMLS:C0272256","SCTID:426336007","ICD9:238.6","MEDGEN:75777"],"synonyms":[{"name":"SPB","type":"related"},{"name":"isolated osseous plasmacytoma","type":"exact"},{"name":"isolated plasmacytoma of bone","type":"exact"},{"name":"solitary plasmacytoma of bone","type":"exact"}],"termid":"MONDO:0002755","xrefs":{"Monarch":{"xref_id":"0002755"}}}


id: MONDO:0035669
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute disseminated encephalomyelitis","termid":"MONDO:0019383"},{"relation_name":"is_a","term_name":"myelin oligodendrocyte glycoprotein antibody-associated disease","termid":"MONDO:1040024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"acute disseminated encephalomyelitis with anti-MOG antibodies","secondary_identifiers":["UMLS:C5680301","Orphanet:592894","ICD10CM:G04.0","GARD:22378","MEDGEN:1842363"],"synonyms":[{"name":"ADEM with anti-MOG antibodies","type":"exact"},{"name":"Acute disseminated encephalomyelitis with anti-myelin oligodendrocyte glycoprotein antibodies","type":"exact"}],"termid":"MONDO:0035669","xrefs":{"Monarch":{"xref_id":"0035669"}}}


id: MONDO:1011596
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe combined immunodeficiency disease that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"severe combined immunodeficiency disease, non-human animal","termid":"MONDO:1011422"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"severe combined immunodeficiency disease, dog","secondary_identifiers":["OMIA:000220-9615"],"termid":"MONDO:1011596","xrefs":{"Monarch":{"xref_id":"1011596"}}}


id: GO:0097576
data:
  {"annotated_genes":["SJAG_00330","SJAG_03915","SJAG_03137","SJAG_04966","SJAG_03347","SJAG_02384","SJAG_02433","SJAG_01324","SJAG_04909","SJAG_03072","SJAG_00380","SJAG_01299","SJAG_05184","SJAG_03011","SJAG_05194","SJAG_03386","SJAG_00029","SJAG_01072","SJAG_01598"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96130,101329,118041,119415],"is_not":false,"summary":null,"term":"GO:0097576"},{"annotations":[103275],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0061192"},{"annotations":[112113,99437],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0061191"},{"annotations":[99197],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032889"},{"annotations":[106465,111273,101781,102940,92984,110120,102075,118688,72898,93110,102571],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042144"}]},"cv_name":"biological_process","definition":"Merging of two or more vacuoles, or of vacuoles and vesicles within a cell to form a single larger vacuole.","definition_xrefs":["GOC:vw","Wikipedia:Vacuole","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuole organization","termid":"GO:0007033"},{"relation_name":"is_a","term_name":"organelle fusion","termid":"GO:0048284"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00029":null,"SJAG_00330":null,"SJAG_00380":null,"SJAG_01072":null,"SJAG_01299":null,"SJAG_01324":null,"SJAG_01598":null,"SJAG_02384":null,"SJAG_02433":null,"SJAG_03011":null,"SJAG_03072":null,"SJAG_03137":null,"SJAG_03347":null,"SJAG_03386":null,"SJAG_03915":null,"SJAG_04909":null,"SJAG_04966":null,"SJAG_05184":null,"SJAG_05194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vacuole fusion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0097576","terms_by_termid":{"GO:0032889":null,"GO:0042144":null,"GO:0061191":null,"GO:0061192":null,"GO:0097576":null}}


id: PBO:0017808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin H transmembrane transporter (predicted)","termid":"PBO:0017808"}


id: MONDO:0021019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked recessive ocular albinism (XLOA) is a rare disorder characterized by ocular hypopigmentation, foveal hypoplasia, nystagmus, photodysphoria, and reduced visual acuity in males.","definition_xrefs":["Orphanet:54"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ocular albinism","termid":"MONDO:0017304"},{"relation_name":"is_a","term_name":"X-linked recessive disease","termid":"MONDO:0020605"},{"relation_name":"is_a","term_name":"albinism","termid":"MONDO:0043209"},{"relation_name":"is_a","term_name":"GPR143-related foveal hypoplasia","termid":"MONDO:0700230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"X-linked recessive ocular albinism","secondary_identifiers":["SCTID:78642008","NCIT:C118785","icd11.foundation:846740259","ICD9:270.2","OMIM:300500","UMLS:C0342684","MEDGEN:90991","MESH:C537863","GARD:8471"],"synonyms":[{"name":"Nettleship-Falls syndrome","type":"exact"},{"name":"Nettleship-Falls type ocular albinism","type":"related"},{"name":"OA1","type":"exact"},{"name":"X-linked ocular albinism","type":"related"},{"name":"XLOA","type":"exact"},{"name":"albinism, ocular, type 1","type":"related"},{"name":"albinism, ocular, type I","type":"related"},{"name":"ocular albinism type 1","type":"exact"},{"name":"ocular albinism, Nettleship-Falls type","type":"exact"},{"name":"ocular albinism, type I, Nettleship-Falls type","type":"exact"}],"termid":"MONDO:0021019","xrefs":{"Monarch":{"xref_id":"0021019"}}}


id: GO:0090238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of arachidonic acid secretion, the controlled release of arachidonic acid from a cell or a tissue.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of icosanoid secretion","termid":"GO:0032305"},{"relation_name":"is_a","term_name":"regulation of arachidonate secretion","termid":"GO:0090237"},{"relation_name":"positively_regulates","term_name":"arachidonate secretion","termid":"GO:0050482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of arachidonate secretion","synonyms":[{"name":"positive regulation of arachidonic acid secretion","type":"exact"}],"termid":"GO:0090238"}


id: MONDO:0010571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A severe form of otopalatodigital syndrome spectrum disorder, and is characterized by dysmorphic facies, severe skeletal dysplasia affecting the axial and appendicular skeleton, extraskeletal anomalies (including malformations of the brain, heart, genitourinary system, and intestine) and poor survival.","definition_xrefs":["Orphanet:90652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otopalatodigital syndrome","termid":"MONDO:0019027"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otopalatodigital syndrome type 2","secondary_identifiers":["OMIM:304120","MEDGEN:337064","DOID:0111784","MESH:C538089","GARD:5802","NORD:1539","icd11.foundation:1897308206","SCTID:42432003","UMLS:C1844696","ICD9:759.89"],"synonyms":[{"name":"Andre syndrome","type":"related"},{"name":"FPO","type":"related"},{"name":"OPD 2 syndrome","type":"exact"},{"name":"OPD II syndrome","type":"exact"},{"name":"OPD syndrome 2","type":"exact"},{"name":"OPD2","type":"related"},{"name":"Otopalatodigital Syndrome Type I and II","type":"exact"},{"name":"cranio-oro-digital syndrome","type":"related"},{"name":"cranioorodigital syndrome","type":"related"},{"name":"faciopalatoosseous syndrome","type":"related"},{"name":"oto-palato-digital syndrome type 2","type":"related"},{"name":"otopalatodigital syndrome, type 2","type":"related"},{"name":"otopalatodigital syndrome, type II","type":"related"},{"name":"otopalatodigital syndrome, type II, X-linked dominant","type":"exact"}],"termid":"MONDO:0010571","xrefs":{"Monarch":{"xref_id":"0010571"}}}


id: PBO:0039005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFF1 antisense RNA 1","termid":"PBO:0039005"}


id: MONDO:0032785
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"postaxial polydactyly","termid":"MONDO:0020927"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly, postaxial, type a10","secondary_identifiers":["MEDGEN:1676955","GARD:18178","OMIM:618498","UMLS:C5193129"],"synonyms":[{"name":"PAPA10","type":"related"},{"name":"POLYDACTYLY, POSTAXIAL, TYPE A10","type":"related"}],"termid":"MONDO:0032785","xrefs":{"Monarch":{"xref_id":"0032785"}}}


id: GO:0048896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a glial cell along the axons in a lateral line nerve.","definition_xrefs":["PMID:12062041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell migration","termid":"GO:0008347"},{"relation_name":"part_of","term_name":"lateral line nerve development","termid":"GO:0048892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral line nerve glial cell migration","synonyms":[{"name":"glial cell migration in lateral line nerve","type":"exact"}],"termid":"GO:0048896"}


id: PBO:0054061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1405","termid":"PBO:0054061"}


id: PBO:0029815
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population_after_spore_germination,_single_or_double_cell_division,_abnormal_cell_shape_(obsolete_FYPO:0002422)","termid":"PBO:0029815"}


id: PBO:0029473
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_tapered_vegetative_cell","termid":"PBO:0029473"}


id: PBO:0084774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial outer membrane protein, ERMES complex subunit; required for transmission of mitochondria to daughter cells; required for mitophagy; may influence import and assembly of outer membrane beta-barrel proteins; ERMES complex is often co-localized with peroxisomes and with concentrated areas of pyruvate dehydrogenase","termid":"PBO:0084774"}


id: GO:0110160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the cell cycle process in which the distance is lengthened between poles of the mitotic spindle during mitotic prophase (spindle phase one).","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic spindle formation (spindle phase one)","termid":"GO:0110159"},{"relation_name":"is_a","term_name":"negative regulation of spindle assembly","termid":"GO:1905831"},{"relation_name":"negatively_regulates","term_name":"mitotic spindle formation (spindle phase one)","termid":"GO:0061804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0000226","GO:0007010","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of mitotic spindle formation (spindle phase one)","termid":"GO:0110160"}


id: MONDO:0008994
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cleidocranial dysplasia 1","termid":"MONDO:0007340"},{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"cleidocranial dysplasia, recessive form","secondary_identifiers":["GARD:10623","MESH:C565843","UMLS:C1859080","OMIM:216330","MEDGEN:395170"],"synonyms":[{"name":"autosomal recessive form of cleidocranial dysostosis","type":"related"},{"name":"cleidocranial dysplasia recessive form","type":"related"},{"name":"cleidocranial dysplasia, recessive form","type":"exact"}],"termid":"MONDO:0008994","xrefs":{"Monarch":{"xref_id":"0008994"}}}


id: FYPO:0002483
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, has an abnormally low volume, and tapers at one end to a diameter smaller than the other. The cell diameter at the narrow end is smaller than that of a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable small vegetative cell","termid":"FYPO:0000951"},{"relation_name":"is_a","term_name":"inviable tapered vegetative cell","termid":"FYPO:0002111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000004","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"inviable small tapered vegetative cell","synonyms":[{"name":"inviable small bottle-shaped vegetative cell","type":"exact"},{"name":"inviable small bottle-shaped vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable small bottle/skittle vegetative cell","type":"exact"},{"name":"inviable small skittle-shaped vegetative cell","type":"exact"},{"name":"inviable small tapered cell during vegetative growth","type":"exact"},{"name":"lethal; small tapered vegetative cell","type":"exact"}],"termid":"FYPO:0002483"}


id: PBO:0069899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1190, pseudogene","termid":"PBO:0069899"}


id: GO:0030996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the mitotic cell cycle is halted during one of the normal phases (G1, S, G2, M) as a result of deprivation of nitrogen.","definition_xrefs":["GOC:mah","GOC:tb","GOC:dph","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic cell cycle arrest in response to nitrogen starvation (obsolete GO:0030996)","synonyms":[{"name":"cell cycle arrest in response to nitrogen starvation","type":"broad"}],"termid":"GO:0030996"}


id: PBO:0089871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine decarboxylase T subunit","termid":"PBO:0089871"}


id: PBO:0088590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxic oxygen sensor, prolyl-3,4-dihydroxylase Ofd1","termid":"PBO:0088590"}


id: PBO:0048057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 6","termid":"PBO:0048057"}


id: PR:O94530
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sua5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94530"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonylcarbamoyl-AMP synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC895.03c","synonyms":[{"name":"L-threonylcarbamoyladenylate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sua5","type":"exact"},{"name":"TC-AMP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"t(6)A37 threonylcarbamoyladenosine biosynthesis protein sua5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA threonylcarbamoyladenosine biosynthesis protein sua5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94530"}


id: PBO:0065994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid induced 14","termid":"PBO:0065994"}


id: GO:0070614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of tungstate (WO4 2-) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Tungstate is a bivalent oxoanion of tungsten.","definition_xrefs":["GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"tungstate ion transport","termid":"GO:0070614"}


id: GO:0061510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a protein is transported to, or maintained to the new mitotic spindle pole body resulting in its being distributed asymmetrically.","definition_xrefs":["GOC:vw","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete asymmetric protein localization to new mitotic spindle pole body (obsolete GO:0061510)","termid":"GO:0061510"}


id: MONDO:0032921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia, neonatal respiratory insufficiency, and thermodysregulation","secondary_identifiers":["MEDGEN:1716098","OMIM:618797","UMLS:C5394091"],"synonyms":[{"name":"NEDHRIT","type":"related"},{"name":"NEURODEVELOPMENTAL DISORDER WITH HYPOTONIA, NEONATAL RESPIRATORY INSUFFICIENCY, AND THERMODYSREGULATION","type":"related"}],"termid":"MONDO:0032921","xrefs":{"Monarch":{"xref_id":"0032921"}}}


id: PBO:0073340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 2","termid":"PBO:0073340"}


id: MONDO:0020455
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital partial agenesis of pericardium is a rare, mostly asymptomatic, congenital heart malformation mainly characterized by the partial absence of the left pericardium. It is occasionally associated with chest pain or dyspnea and is usually incidentally diagnosed during surgery or at autopsy. Herniation and strangulation of a portion of the heart through the pericardial foramen may occur, resulting in myocardial acute ischemia and possible sudden death. Right side pericardium involvement is rare.","definition_xrefs":["Orphanet:99130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pericardium anomaly","termid":"MONDO:0017300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital partial agenesis of pericardium","secondary_identifiers":["GARD:19667","MEDGEN:576785","UMLS:C0345139"],"termid":"MONDO:0020455","xrefs":{"Monarch":{"xref_id":"0020455"}}}


id: GO:0036124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of three methyl groups to lysine at position 9 of the histone.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K9 trimethylation (obsolete GO:0036124)","termid":"GO:0036124"}


id: PBO:0081930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger NFX1-type containing 1","termid":"PBO:0081930"}


id: PBO:0078578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 53A, pseudogene","termid":"PBO:0078578"}


id: GO:0005527
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a macrolide, any of a large group of structurally related antibiotics produced by Streptomyces species.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"macrolide binding","termid":"GO:0005527"}


id: FYPO:0007744
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a short spindle assembles during the first meiotic nuclear division, and may begin elongation, but does not elongate normally or completely, and collapses during prophase I. Upon collapse the spindle may break or shrink.","definition_xrefs":["PMID:32723864","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle collapse during meiosis I","termid":"FYPO:0007103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"spindle collapse during meiotic prophase I","synonyms":[{"name":"broken meiotic spindle during prophase I","type":"related"},{"name":"meiotic spindle breakage during prophase I","type":"exact"},{"name":"spindle collapse during prophase I of meiotic cell cycle","type":"related"},{"name":"spindle collapse during prophase of meiosis I","type":"exact"}],"termid":"FYPO:0007744"}


id: GO:0033913
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the random hydrolysis of (1->2)-glucosidic linkages in (1->2)-beta-D-glucans.","definition_xrefs":["EC:3.2.1.71"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"glucan endo-1,2-beta-glucosidase activity","secondary_identifiers":["MetaCyc:3.2.1.71-RXN"],"synonyms":[{"name":"1,2-beta-D-glucan glucanohydrolase activity","type":"related"},{"name":"beta-D-1,2-glucanase activity","type":"related"},{"name":"endo-(1->2)-beta-D-glucanase activity","type":"related"},{"name":"endo-1,2-beta-glucanase activity","type":"related"}],"termid":"GO:0033913"}


id: GO:0140759
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + histone H3 L-lysine (position 56) = S-adenosyl-L-homocysteine + histone H3 N6-methyl-L-lysine (position 56). This reaction is the addition of a methyl group to the lysine residue at position 56 of the histone H3 protein.","definition_xrefs":["PMID:23451023","PMID:28743002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lysine N-methyltransferase activity","termid":"GO:0016279"},{"relation_name":"is_a","term_name":"histone H3 methyltransferase activity","termid":"GO:0140938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0140096","GO:0016740","GO:0003824","GO:0008276"],"is_obsolete":false,"name":"histone H3K56 methyltransferase activity","synonyms":[{"name":"histone H3K56 methylase activity","type":"exact"},{"name":"histone lysine N-methyltransferase activity (H3-K56 specific)","type":"exact"},{"name":"histone methyltransferase activity (H3-K56 specific)","type":"exact"},{"name":"histone-H3K56 methyltransferase activity","type":"exact"}],"termid":"GO:0140759"}


id: PBO:0041867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 14","termid":"PBO:0041867"}


id: PBO:0042219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin Q","termid":"PBO:0042219"}


id: PBO:0075075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 125","termid":"PBO:0075075"}


id: PBO:0062880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTX2 pseudogene 1","termid":"PBO:0062880"}


id: MONDO:0009429
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypophosphatemia, renal, with intracerebral calcifications","secondary_identifiers":["MESH:C565478","UMLS:C1855809","MEDGEN:383776","OMIM:241519"],"synonyms":[{"name":"hypophosphatemia, renal, with intracerebral calcifications","type":"exact"}],"termid":"MONDO:0009429","xrefs":{"Monarch":{"xref_id":"0009429"}}}


id: PBO:0047538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 4","termid":"PBO:0047538"}


id: MONDO:0015597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"psoriasis","termid":"MONDO:0005083"},{"relation_name":"is_a","term_name":"epidermal disease","termid":"MONDO:0019268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"pustulosis palmaris et plantaris","secondary_identifiers":["UMLS:C0030246","MESH:D011565","icd11.foundation:877172115","MEDGEN:45290","GARD:12820","ICD10CM:L40.3","NCIT:C34888","Orphanet:163927","DOID:4398","MedDRA:10050185","NORD:2008","SCTID:27520001","ICD9:696.1","SCTID:81271001"],"synonyms":[{"name":"LPP","type":"exact"},{"name":"PPP","type":"exact"},{"name":"Palmoplantar Pustulosis","type":"exact"},{"name":"acropustulosis","type":"exact"},{"name":"localised pustular psoriasis","type":"exact"},{"name":"localized pustular psoriasis","type":"exact"},{"name":"palmoplantar pustulosis","type":"exact"},{"name":"pustular psoriasis of the palms and/or soles","type":"exact"},{"name":"pustulosis of palm and sole","type":"exact"}],"termid":"MONDO:0015597","xrefs":{"Monarch":{"xref_id":"0015597"}}}


id: PBO:0063826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired like homeobox 2A","termid":"PBO:0063826"}


id: PBO:0005191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine deaminase (predicted)","termid":"PBO:0005191"}


id: PBO:0080793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XPC antisense RNA 1","termid":"PBO:0080793"}


id: GO:0009998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that restricts, stops or prevents a cell from specifying into a retinal cone cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"regulation of retinal cone cell fate specification","termid":"GO:0042673"},{"relation_name":"is_a","term_name":"negative regulation of retinal cone cell fate commitment","termid":"GO:0060226"},{"relation_name":"negatively_regulates","term_name":"retinal cone cell fate specification","termid":"GO:0042672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of retinal cone cell fate specification","synonyms":[{"name":"down regulation of retinal cone cell fate specification","type":"exact"},{"name":"down-regulation of retinal cone cell fate specification","type":"exact"},{"name":"downregulation of retinal cone cell fate specification","type":"exact"},{"name":"inhibition of retinal cone cell fate specification","type":"narrow"},{"name":"negative regulation of retina cone cell fate specification","type":"exact"},{"name":"suppression of retina cone cell fate","type":"exact"},{"name":"suppression of retinal cone cell fate","type":"exact"}],"termid":"GO:0009998"}


id: MONDO:0013592
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anonychia-onychodystrophy syndrome","termid":"MONDO:0019577"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nonsyndromic congenital nail disorder 9","secondary_identifiers":["DOID:0080087","GARD:15762","UMLS:C3279947","ICD9:703.8","SCTID:87065009","MEDGEN:481577","OMIM:614149"],"synonyms":[{"name":"NDNC9","type":"related"},{"name":"anonychia-onycholysis, isolated","type":"related"},{"name":"nail disorder, nonsyndromic congenital, 9","type":"related"},{"name":"nail dysplasia","type":"related"},{"name":"nonsyndromic congenital nail disorder type 9","type":"exact"},{"name":"onychodystrophy","type":"related"}],"termid":"MONDO:0013592","xrefs":{"Monarch":{"xref_id":"0013592"}}}


id: PBO:0066059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rap guanine nucleotide exchange factor 4","termid":"PBO:0066059"}


id: PBO:0081875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF816-ZNF321P readthrough","termid":"PBO:0081875"}


id: MONDO:0001118
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spotted fever that has material basis in Rickettsia australis, which is transmitted by ticks (Ixodes holocyclus). The infection has symptom fever, has symptom headache, has symptom myalgia, has symptom maculopapular rash, and has symptom lymphadenopathy.","definition_xrefs":["DOID:10784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spotted fever","termid":"MONDO:0001195"},{"relation_name":"is_a","term_name":"tick-borne infectious disease","termid":"MONDO:0025294"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Queensland tick typhus","secondary_identifiers":["ICD9:082.3","SCTID:68981009","UMLS:C2979888","ICD10CM:A77.3","MEDGEN:755996"],"synonyms":[{"name":"Australian tick typhus","type":"related"},{"name":"North Queensland tick typhus","type":"related"},{"name":"Rickettsia australis spotted fever","type":"exact"}],"termid":"MONDO:0001118","xrefs":{"Monarch":{"xref_id":"0001118"}}}


id: FYPO:0007679
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at the RTS1 barrier (normally located in the mating-type region) occurs to a greater extent than normal.","definition_xrefs":["PMID:33568651","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork arrest","termid":"FYPO:0003088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000293"],"is_obsolete":false,"name":"increased replication fork arrest at RTS1 barrier","termid":"FYPO:0007679"}


id: GO:0045925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the receptiveness of a female to male advances.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of female receptivity","termid":"GO:0045924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of female receptivity","synonyms":[{"name":"activation of female receptivity","type":"narrow"},{"name":"stimulation of female receptivity","type":"narrow"},{"name":"up regulation of female receptivity","type":"exact"},{"name":"up-regulation of female receptivity","type":"exact"},{"name":"upregulation of female receptivity","type":"exact"}],"termid":"GO:0045925"}


id: GO:0044018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H3 L-lysine (position 36) = CoA + histone H3 N6-acetyl-L-lysine (position 36).","definition_xrefs":["PMID:18552846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 acetyltransferase activity","termid":"GO:0010484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0003824","GO:0034212","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"histone H3K36 acetyltransferase activity","synonyms":[{"name":"histone H3-K36 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H3-K36 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H3-K36 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H3-K36 specific)","type":"exact"}],"termid":"GO:0044018"}


id: GO:0021574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of rhombomere 8 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:cls","GOC:dgh","GO_REF:0000021","GOC:jid","GOC:curators","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 8 development","termid":"GO:0021574"}


id: GO:0060410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the chemical reactions and pathways involving acetylcholine, the acetic acid ester of the organic base choline. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amine metabolic process","termid":"GO:0033239"},{"relation_name":"is_a","term_name":"regulation of acetylcholine metabolic process","termid":"GO:0060408"},{"relation_name":"negatively_regulates","term_name":"acetylcholine metabolic process","termid":"GO:0008291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of acetylcholine metabolic process","termid":"GO:0060410"}


id: GO:0052861
data:
  {"annotated_genes":["SJAG_00667","SJAG_01017"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62741,71029],"is_not":false,"summary":null,"term":"GO:0052861"}]},"cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of (1->3)- or (1->4)-linkages in beta-D-glucans when the glucose residue whose reducing group is involved in the linkage to be hydrolyzed is itself substituted at C-3. Substrates include laminarin, lichenin and cereal D-glucans.","definition_xrefs":["EC:3.2.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucanase activity","termid":"GO:0052736"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_01017":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"endo-1,3(4)-beta-glucanase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:3.2.1.6-RXN"],"synonyms":[{"name":"1,3-(1,3)-beta-D-glucan 3-glucanohydrolase activity","type":"narrow"},{"name":"glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group","type":"narrow"},{"name":"glucan endo-1,4-beta-glucanase activity, C-3 substituted reducing group","type":"narrow"},{"name":"laminaranase activity","type":"related"},{"name":"laminarinase activity","type":"related"}],"termid":"GO:0052861","terms_by_termid":{"GO:0052861":null}}


id: GO:1904942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac ventricle formation.","definition_xrefs":["GOC:BHF","PMID:23575307","GOC:BHF_miRNA","GOC:TermGenie","GO_REF:0000058","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac chamber formation","termid":"GO:1901210"},{"relation_name":"regulates","term_name":"cardiac ventricle formation","termid":"GO:0003211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac ventricle formation","termid":"GO:1904942"}


id: PBO:0077582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomodulin 1","termid":"PBO:0077582"}


id: PBO:0042693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxyl ester lipase","termid":"PBO:0042693"}


id: PR:O94538
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U4/U6.U5 tri-snRNP-associated protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00627","PANTHER:PTHR14152:SF5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6.U5 tri-snRNP-associated protein snu66 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC167.03c","secondary_identifiers":["UniProtKB:O94538"],"synonyms":[{"name":"Spom972h-SART1","type":"exact"}],"termid":"PR:O94538"}


id: PBO:0048051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1","termid":"PBO:0048051"}


id: PBO:0089798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spliceosomal complex subunit","termid":"PBO:0089798"}


id: GO:0140421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement into cell of externally available heme by receptor-mediated endocytosis.","definition_xrefs":["PMID:28193844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytic iron import into cell","termid":"GO:0140298"},{"relation_name":"is_a","term_name":"heme import into cell","termid":"GO:0140420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0098771","GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"endocytic heme import into cell","synonyms":[{"name":"heme assimilation","type":"broad"}],"termid":"GO:0140421"}


id: MONDO:1010124
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune lymphoproliferative syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"},{"relation_name":"is_a","term_name":"autoimmune disease, non-human animal","termid":"MONDO:1012985"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoimmune lymphoproliferative syndrome, non-human animal","secondary_identifiers":["OMIA:002064"],"termid":"MONDO:1010124","xrefs":{"Monarch":{"xref_id":"1010124"}}}


id: PBO:0038717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 12","termid":"PBO:0038717"}


id: MONDO:0016624
data:
  {"annotated_genes":["SJAG_00694","SJAG_04425","SJAG_04459","SJAG_01007","SJAG_03447","SJAG_01199","SJAG_04042","SJAG_03164"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009238"},{"annotations":[87031,87032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009354"},{"annotations":[87642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009609"},{"annotations":[88473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010184"},{"annotations":[86875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008787"},{"annotations":[87023,87022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009797"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"deficiency anemia","termid":"MONDO:0001639"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00694":null,"SJAG_01007":null,"SJAG_01199":null,"SJAG_03164":null,"SJAG_03447":null,"SJAG_04042":null,"SJAG_04425":null,"SJAG_04459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"hereditary anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:248296","UMLS:C5680695","GARD:20669","MEDGEN:1842172"],"synonyms":[{"name":"constitutional deficiency anemia","type":"exact"},{"name":"constitutional rare deficiency anaemia","type":"exact"},{"name":"constitutional rare deficiency anemia","type":"exact"},{"name":"inherited deficiency anemia","type":"exact"}],"termid":"MONDO:0016624","terms_by_termid":{"MONDO:0008787":null,"MONDO:0009238":null,"MONDO:0009354":null,"MONDO:0009609":null,"MONDO:0009797":null,"MONDO:0010184":null},"xrefs":{"Monarch":{"xref_id":"0016624"}}}


id: FYPO:0006061
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which septin ring assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-containing complex assembly","termid":"FYPO:0000447"},{"relation_name":"is_a","term_name":"abnormal cytoskeleton organization during vegetative growth","termid":"FYPO:0001328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal septin ring assembly during vegetative growth","synonyms":[{"name":"abnormal septin ring assembly during mitotic cell cycle","type":"related"},{"name":"abnormal septin ring formation during vegetative growth","type":"exact"}],"termid":"FYPO:0006061"}


id: SO:0000078
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript that is polycistronic.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"polycistronic","termid":"SO:0000880"},{"relation_name":"is_a","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycistronic_transcript","synonyms":[{"name":"polycistronic transcript","type":"exact"}],"termid":"SO:0000078"}


id: PBO:0003701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG box protein","termid":"PBO:0003701"}


id: PBO:0003451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta subunit Cdc27","termid":"PBO:0003451"}


id: GO:0034525
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-naphthaldehyde + NAD+ + H2O = 1-naphthoic acid + NADH + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-naphthaldehyde dehydrogenase activity (obsolete GO:0034525)","termid":"GO:0034525"}


id: PBO:0012843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptide-methionine (S)-S-oxide reductase MsrA","termid":"PBO:0012843"}


id: MONDO:0100107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-neonatal early-onset epileptic encephalopathy is a form an of age-related epileptic encephalopathies, characterized by the onset of seizures later than the first 4 weeks of life but within the first three months. Seizures can be generalized or lateralized, independent of the sleep cycle and can occur multiple times per day, leading to psychomotor impairment and death.","direct_ancestors":[{"relation_name":"is_a","term_name":"genetic developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"non-neonatal early infantile epileptic encephalopathy","termid":"MONDO:0100107","xrefs":{"Monarch":{"xref_id":"0100107"}}}


id: MONDO:0100346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary microcephaly refers to the clinical finding of a head circumference more than than 3 standard deviations (SD) below the age- and sex-related mean, present at birth. Primary microcephaly is a static developmental anomaly, distinguished from secondary microcephaly, which refers to a progressive neurodegenerative condition. Microcephaly is a disorder of fetal brain growth; individuals with microcephaly have small brains and almost always have intellectual disability, although rare individuals with mild microcephaly (-3 SD) and normal intelligence have been reported. Additional clinical features may include short stature or mild seizures. These clinical features include Seckel syndrome, a rare autosomal recessive disorder characterized by intrauterine growth retardation, dwarfism, microcephaly with intellectual disability.","definition_xrefs":["PMID:9128935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly with or without short stature","termid":"MONDO:0100346","xrefs":{"Monarch":{"xref_id":"0100346"}}}


id: GO:0003202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where an endocardial cushion cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell that will give rise to the cardiac skeleton.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocardial cushion to mesenchymal transition","termid":"GO:0090500"},{"relation_name":"part_of","term_name":"cardiac skeleton development","termid":"GO:0003204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cushion to mesenchymal transition involved in cardiac skeleton development","termid":"GO:0003202"}


id: GO:0061392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.","definition_xrefs":["GOC:dph","PMID:12086627","PMID:9858577"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to osmotic stress (obsolete GO:0061392)","termid":"GO:0061392"}


id: PBO:0079404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 7 pseudogene","termid":"PBO:0079404"}


id: PBO:0027692
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromosome_morphology,_indistinct_DNA","termid":"PBO:0027692"}


id: PBO:0057476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 595","termid":"PBO:0057476"}


id: GO:0102362
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: esculetin + UDP-alpha-D-glucose = 3-O-beta-D-glucosyl-esculetin + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete esculetin 3-O-glucosyltransferase activity (obsolete GO:0102362)","termid":"GO:0102362"}


id: PBO:0080125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle associated membrane protein 3","termid":"PBO:0080125"}


id: MONDO:0016409
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Primary congenital hypothyroidism is a type of permanent congenital hypothyroidism, a permanent thyroid hormone deficiency that is present from birth.","definition_xrefs":["Orphanet:226295"],"gene_count":0,"genotype_count":0,"name":"obsolete primary congenital hypothyroidism (obsolete MONDO:0016409)","termid":"MONDO:0016409","xrefs":{"Monarch":{"xref_id":"0016409"}}}


id: GO:0051051
data:
  {"annotated_genes":["SJAG_03581","SJAG_03970","SJAG_03631","SJAG_01311","SJAG_00296"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115218,93030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[96393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045806"},{"annotations":[89903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[89904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905533"},{"annotations":[107638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"},{"annotations":[89905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905530"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"negatively_regulates","term_name":"transport","termid":"GO:0006810"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_01311":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03970":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of transport","type":"exact"},{"name":"down-regulation of transport","type":"exact"},{"name":"downregulation of transport","type":"exact"},{"name":"inhibition of transport","type":"narrow"}],"termid":"GO:0051051","terms_by_termid":{"GO:0042308":null,"GO:0042997":null,"GO:0045806":null,"GO:1905530":null,"GO:1905533":null,"GO:1905949":null}}


id: GO:0097697
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-carboxymethoxyuridine34 in tRNA + S-adenosyl-L-methionine = 5-methoxycarbonylmethoxyuridine34 in tRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:54080","PMID:26681692"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (uridine) methyltransferase activity","termid":"GO:0016300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140101","GO:0016740","GO:0003674","GO:0003824","GO:0016741","GO:0140098"],"is_obsolete":false,"name":"tRNA (5-carboxymethoxyuridine(34)-5-O)-methyltransferase activity","synonyms":[{"name":"tRNA 5-carboxymethoxyuridine methyltransferase activity","type":"related"}],"termid":"GO:0097697"}


id: PBO:0061823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 13 Y-linked","termid":"PBO:0061823"}


id: MONDO:0000193
data:
  {"annotated_genes":["SJAG_02148","SJAG_02696"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87349,87350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011503"}]},"cv_name":"mondo","definition":"A disorder in which there is a failure to regenerate the active glucocorticoid cortisol from cortisone via 11beta-HSD1. The resulting lack of cortisol regeneration stimulates ACTH-mediated adrenal hyperandrogenism, with males manifesting in childhood with precocious pseudopuberty and females presenting in adolescence and early adulthood with hirsutism, oligoamenorrhea, and infertility.","definition_xrefs":["PMID:21325058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"adrenogenital syndrome","termid":"MONDO:0015898"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02148":null,"SJAG_02696":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"cortisone reductase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:124138004","GARD:9882","ICD9:277.6","MEDGEN:266223","Orphanet:168588","DOID:0090139","OMIMPS:604931","MESH:C536447","UMLS:C1291245"],"synonyms":[{"name":"11-alpha beta-hydroxysteroid dehydrogenase type I deficiency of","type":"related"},{"name":"11-beta-hydroxysteroid dehydrogenase deficiency type 1","type":"exact"},{"name":"CORTRD","type":"exact"},{"name":"HSD 11B1 deficiency","type":"narrow"},{"name":"deficiency of (R)-20-hydroxysteroid dehydrogenase","type":"exact"},{"name":"deficiency of cortisone reductase","type":"exact"},{"name":"hyperandrogenism due to cortisone reductase deficiency","type":"exact"}],"termid":"MONDO:0000193","terms_by_termid":{"MONDO:0011503":null},"xrefs":{"Monarch":{"xref_id":"0000193"}}}


id: PBO:0047079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 135 member A","termid":"PBO:0047079"}


id: MONDO:1012477
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disproportionate short-limbed chondrodysplasia that occurs in dogs due to a mutation in the ITGA10 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disproportionate short-limbed chondrodysplasia, non-human animal","termid":"MONDO:1011965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disproportionate short-limbed chondrodysplasia, ITGA10-related, dog","secondary_identifiers":["OMIA:001886-9615"],"termid":"MONDO:1012477","xrefs":{"Monarch":{"xref_id":"1012477"}}}


id: GO:0044538
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of a cell encompassing the cell cortex, the plasma membrane, and any external encapsulating structures of a host cell.","definition_xrefs":["PMID:20463076","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell periphery","termid":"GO:0044538"}


id: GO:0046710
data:
  {"annotated_genes":["SJAG_04849"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65368],"is_not":false,"summary":null,"term":"GO:0046710"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving GDP, guanosine 5'-diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside diphosphate metabolic process","termid":"GO:0009179"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04849":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"GDP metabolic process","references_by_uniquename":{"GO_REF:0000108":null},"synonyms":[{"name":"GDP metabolism","type":"exact"}],"termid":"GO:0046710","terms_by_termid":{"GO:0046710":null}}


id: PBO:0059686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 52","termid":"PBO:0059686"}


id: PBO:0000573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup45","termid":"PBO:0000573"}


id: PBO:0087005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein (RhoGAP); stimulates the intrinsic GTPase activity of Rho1p, which plays a bud growth by regulating actin cytoskeleton organization and cell wall biosynthesis, resulting in the downregulation of Rho1p; structurally and functionally related to Sac7p; BAG7 has a paralog, SAC7, that arose from the whole genome duplication","termid":"PBO:0087005"}


id: MONDO:0013803
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"leukoencephalopathy with calcifications and cysts","secondary_identifiers":["OMIM:614561","MESH:C000598644","GARD:10732","Orphanet:542310","UMLS:C3281200","MEDGEN:482830"],"synonyms":[{"name":"LCC","type":"exact"},{"name":"Labrune syndrome","type":"related"},{"name":"leukoencephalopathy, brain calcifications, and cysts","type":"exact"}],"termid":"MONDO:0013803","xrefs":{"Monarch":{"xref_id":"0013803"}}}


id: PATO:0001488
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a cell by virtue of whether the bearer exhibits the ability to move spontaneously.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular quality","termid":"PATO:0001396"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular motility","termid":"PATO:0001488"}


id: PR:O74372
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- duo1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit duo1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.08c","synonyms":[{"name":"Spom972h-duo1","type":"exact"},{"name":"outer kinetochore protein duo1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74372"}


id: MONDO:0019374
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"CAMOS syndrome is characterized by the association of a non-progressive congenital ataxia, severe intellectual deficit, optic atrophy and structural anomalies of the skin vessels. It has been described in five children from a large consanguineous Lebanese family. Short stature and microcephaly were also reported. Transmission is autosomal recessive.","definition_xrefs":["Orphanet:83472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive congenital cerebellar ataxia","termid":"MONDO:0020043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"CAMOS syndrome","secondary_identifiers":["UMLS:C4511633","GARD:9977","MEDGEN:1387501","OMIM:606937","SCTID:726031001"],"synonyms":[{"name":"CAMOS","type":"related"},{"name":"SCAR5","type":"exact"},{"name":"cerebellar ataxia with intellectual disability optic atrophy and skin abnormalities","type":"related"},{"name":"cerebellar ataxia with mental retardation optic atrophy and skin abnormalities","type":"related"},{"name":"cerebellar ataxia-intellectual disability-optic atrophy-skin abnormalities syndrome","type":"exact"},{"name":"spinocerebellar ataxia autosomal recessive 5","type":"related"}],"termid":"MONDO:0019374","xrefs":{"Monarch":{"xref_id":"0019374"}}}


id: GO:1904727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of replicative senescence.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GO_REF:0000058","PMID:23496142","GOC:rph","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of replicative senescence","termid":"GO:1904726"},{"relation_name":"negatively_regulates","term_name":"replicative senescence","termid":"GO:0090399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of replicative senescence","synonyms":[{"name":"down regulation of replicative senescence","type":"exact"},{"name":"down-regulation of replicative senescence","type":"exact"},{"name":"downregulation of replicative senescence","type":"exact"},{"name":"inhibition of replicative senescence","type":"narrow"}],"termid":"GO:1904727"}


id: PBO:0086945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Receptor for alpha-factor pheromone; seven transmembrane-domain GPCR that interacts with both pheromone and a heterotrimeric G protein to initiate the signaling response that leads to mating between haploid a and alpha cells","termid":"PBO:0086945"}


id: PBO:0083681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endosomal Rab family GTPase; required for endocytic transport and sorting of vacuolar hydrolases; required for endosomal localization of the CORVET complex; required with YPT52 for MVB biogenesis and sorting; involved in autophagy and ionic stress tolerance; geranylgeranylation required for membrane association; protein abundance increases in response to DNA replication stress; mammalian Rab5 homolog; VPS21 has a paralog, YPT53, that arose from the whole genome duplication","termid":"PBO:0083681"}


id: GO:0015969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving guanine tetraphosphate (5'-ppGpp-3'), a derivative of guanine riboside with four phosphates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside bisphosphate metabolic process","termid":"GO:0034035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"guanosine tetraphosphate metabolic process","secondary_identifiers":["MetaCyc:PPGPPMET-PWY"],"synonyms":[{"name":"guanosine tetraphosphate (5'-ppGpp-3') metabolic process","type":"exact"},{"name":"guanosine tetraphosphate (5'-ppGpp-3') metabolism","type":"exact"},{"name":"guanosine tetraphosphate metabolism","type":"exact"}],"termid":"GO:0015969"}


id: MONDO:0700164
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A nephroblastoma occurring in a dog.","definition_xrefs":["NCIT:C158786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine neoplasm","termid":"MONDO:0700139"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine nephroblastoma","termid":"MONDO:0700164","xrefs":{"Monarch":{"xref_id":"0700164"}}}


id: PBO:0001686
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Deb1","termid":"PBO:0001686"}


id: PBO:0000356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR40 (predicted)","termid":"PBO:0000356"}


id: MONDO:0007817
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Immediate hypersensitivity reaction - type I reaction, involves immunoglobulin E (IgE)-mediated release of chemical mediators from mast cells and basophils. Th2 cells produce IL-4 and IL-13, which then act on B cells to promote the production of antigen-specific IgE. Reexposure to the antigen can then result in the antigen binding to and cross-linking the bound IgE antibodies on the mast cells and basophils. This causes the release of preformed mediators (histamine, tryptase, tryptase, chemotactic factors), newly synthesized mediators (leukotrienes, prostaglandin, thromboxane, platelet-activating factor, adenosine, bradykinin), and cytokines from these cells that results in structural and functional changes to the affected tissue.","definition_xrefs":["NCIT:C3116"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"atopic eczema","termid":"MONDO:0004980"},{"relation_name":"is_a","term_name":"hypersensitivity reaction disease","termid":"MONDO:0000605"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"IgE responsiveness, atopic","secondary_identifiers":["OMIM:147050","MESH:C564133","UMLS:C1840253","MEDGEN:327063"],"synonyms":[{"name":"Atopic hypersensitivity","type":"related"},{"name":"IGER","type":"related"},{"name":"IgE response underlying allergic asthma and rhinitis","type":"related"},{"name":"IgE responsiveness, ATOPIC","type":"related"},{"name":"IgE responsiveness, atopic","type":"exact"},{"name":"IgE, elevated level of","type":"exact"},{"name":"IgE, level of","type":"related"},{"name":"Immunoglobulin E, basic level of, in serum","type":"related"},{"name":"atopy, susceptibility to","type":"related"},{"name":"immediate hypersensitivity","type":"exact"},{"name":"type 1 hypersensitivity","type":"exact"},{"name":"type 1 hypersensitivity reaction","type":"exact"},{"name":"type I hypersensitivity","type":"exact"},{"name":"type I hypersensitivity reaction","type":"exact"},{"name":"type I immediate hypersensitivity reaction","type":"exact"}],"termid":"MONDO:0007817","xrefs":{"Monarch":{"xref_id":"0007817"}}}


id: FYPO:0005162
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to salt stress is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"},{"relation_name":"is_a","term_name":"altered RNA level during cellular response to osmotic stress","termid":"FYPO:0003198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"increased RNA level during cellular response to salt stress","synonyms":[{"name":"increased RNA accumulation during cellular response to salt stress","type":"related"},{"name":"increased RNA level during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"increased mRNA level during cellular response to salt stress","type":"narrow"},{"name":"increased transcript level during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0005162"}


id: PBO:0002801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein, G-pathc domain, PINX1 family (predicted)","termid":"PBO:0002801"}


id: GO:1900738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phospholipase C-activating G protein-coupled receptor signaling pathway.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045745"},{"relation_name":"is_a","term_name":"regulation of phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:1900736"},{"relation_name":"positively_regulates","term_name":"phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:0007200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of phospholipase C-activating G protein-coupled receptor signaling pathway","synonyms":[{"name":"activation of G protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"activation of G protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"activation of G-protein coupled receptor signaling pathway coupled to IP3 second messenger","type":"exact"},{"name":"activation of G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"activation of G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"activation of PLC-activating GPCR signaling pathway","type":"exact"},{"name":"activation of activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger","type":"related"},{"name":"activation of phospholipase C-activating G-protein coupled receptor signaling pathway","type":"narrow"},{"name":"activation of phospholipase C-activating dopamine receptor signaling pathway","type":"narrow"},{"name":"positive regulation of G protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"positive regulation of G protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"positive regulation of G-protein coupled receptor signaling pathway coupled to IP3 second messenger","type":"exact"},{"name":"positive regulation of G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"positive regulation of G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"positive regulation of PLC-activating GPCR signaling pathway","type":"exact"},{"name":"positive regulation of activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger","type":"related"},{"name":"positive regulation of phospholipase C-activating G-protein coupled receptor signaling pathway","type":"exact"},{"name":"positive regulation of phospholipase C-activating dopamine receptor signaling pathway","type":"narrow"},{"name":"up regulation of G protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"up regulation of G protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"up regulation of G-protein coupled receptor signaling pathway coupled to IP3 second messenger","type":"exact"},{"name":"up regulation of G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"up regulation of G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"up regulation of PLC-activating GPCR signaling pathway","type":"exact"},{"name":"up regulation of activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger","type":"related"},{"name":"up regulation of phospholipase C-activating G-protein coupled receptor signaling pathway","type":"exact"},{"name":"up regulation of phospholipase C-activating dopamine receptor signaling pathway","type":"narrow"},{"name":"up-regulation of G protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"up-regulation of G protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"up-regulation of G-protein coupled receptor signaling pathway coupled to IP3 second messenger","type":"exact"},{"name":"up-regulation of G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"up-regulation of G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"up-regulation of PLC-activating GPCR signaling pathway","type":"exact"},{"name":"up-regulation of activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger","type":"related"},{"name":"up-regulation of phospholipase C-activating G-protein coupled receptor signaling pathway","type":"exact"},{"name":"up-regulation of phospholipase C-activating dopamine receptor signaling pathway","type":"narrow"},{"name":"upregulation of G protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"upregulation of G protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"upregulation of G-protein coupled receptor signaling pathway coupled to IP3 second messenger","type":"exact"},{"name":"upregulation of G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"upregulation of G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"exact"},{"name":"upregulation of PLC-activating GPCR signaling pathway","type":"exact"},{"name":"upregulation of activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger","type":"related"},{"name":"upregulation of phospholipase C-activating G-protein coupled receptor signaling pathway","type":"exact"},{"name":"upregulation of phospholipase C-activating dopamine receptor signaling pathway","type":"narrow"}],"termid":"GO:1900738"}


id: MOD:00369
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-acetyl-L-serine.","definition_xrefs":["PubMed:489587","ChEBI:17981","PubMed:16731519","PubMed:15350136","PubMed:12175151","RESID:AA0364","PubMed:11999733","PubMed:7309355","Unimod:1#S","PubMed:11857757","PubMed:14730666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetylated residue","termid":"MOD:00644"},{"relation_name":"is_a","term_name":"acetylated L-serine","termid":"MOD:00647"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-acetyl-L-serine","synonyms":[{"name":"(2S)-3-(acetyloxy)-2-aminopropanoic acid","type":"exact"},{"name":"Acetyl","type":"related"},{"name":"Acetylation","type":"related"},{"name":"MOD_RES O-acetylserine","type":"exact"},{"name":"O-acetyl-L-serine","type":"exact"},{"name":"O-acetylated L-serine","type":"exact"},{"name":"O-acetylserine","type":"exact"},{"name":"OAcSer","type":"exact"},{"name":"serine acetate ester","type":"exact"}],"termid":"MOD:00369"}


id: PBO:0027636
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0027636"}


id: PBO:0114427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDLRAD4 antisense RNA 2","termid":"PBO:0114427"}


id: PBO:0002096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AdoMet dependent proline dimethyltransferase involved in translation Tea1 (predicted)","termid":"PBO:0002096"}


id: GO:0052350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates induced systemic resistance in the symbiont; induced systemic resistance is a response that confers broad spectrum systemic resistance to disease and that does not depend upon salicylic acid signaling. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by organism of induced systemic resistance in symbiont (obsolete GO:0052350)","synonyms":[{"name":"activation by organism of ISR in symbiont","type":"exact"},{"name":"activation by organism of induced systemic resistance in symbiont","type":"exact"},{"name":"induction by organism of ISR in symbiont","type":"exact"},{"name":"induction by organism of induced systemic resistance in symbiont","type":"exact"}],"termid":"GO:0052350"}


id: FYPO:0007438
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which activation of the mitotic spindle assembly checkpoint begins earlier than normal. The mitotic spindle assembly checkpoint normally delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle.","definition_xrefs":["PomBase:mah","PMID:28017606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle assembly checkpoint","termid":"FYPO:0000168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000298","FYPO:0000631"],"is_obsolete":false,"name":"premature activation of mitotic spindle assembly checkpoint","synonyms":[{"name":"advanced activation of mitotic spindle assembly checkpoint","type":"exact"},{"name":"premature activation of mitotic cell cycle spindle assembly checkpoint","type":"exact"}],"termid":"FYPO:0007438"}


id: PBO:0077850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triosephosphate isomerase 1 pseudogene 1","termid":"PBO:0077850"}


id: PBO:0061761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2'-5'-oligoadenylate synthetase like","termid":"PBO:0061761"}


id: GO:0042625
data:
  {"annotated_genes":["SJAG_01913","SJAG_05294","SJAG_00516","SJAG_04955","SJAG_01397","SJAG_01471","SJAG_00136","SJAG_04015","SJAG_01817","SJAG_00212","SJAG_02023","SJAG_02782","SJAG_03406","SJAG_01447"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80207,81382,58525,61864,62724,69234,66567,61084,72953,61330,62040,80260,65868,63402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046961"}]},"cv_name":"molecular_function","definition":"Enables the transfer of an ion from one side of a membrane to the other, driven by the reaction: ATP + H2O = ADP + phosphate.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled transmembrane transporter activity","termid":"GO:0042626"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00516":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02782":null,"SJAG_03406":null,"SJAG_04015":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ATPase-coupled ion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"ATP-dependent ion transmembrane transporter activity","type":"exact"},{"name":"ATPase activity, coupled to transmembrane movement of ions","type":"exact"},{"name":"ATPase coupled ion transmembrane transporter activity","type":"exact"}],"termid":"GO:0042625","terms_by_termid":{"GO:0046961":null}}


id: FYPO:0007878
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein degradation is decreased during a cellular response to methyl methanesulfonate. Protein degradation, also known as protein catabolism, is any metabolic process that results in the destruction of the native, active configuration of a protein, with or without the hydrolysis of peptide bonds.","definition_xrefs":["PomBase:mah","PMID:34608864","GO:0030163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein degradation during vegetative growth","termid":"FYPO:0000845"},{"relation_name":"is_a","term_name":"decreased protein degradation","termid":"FYPO:0002797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0002274","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein degradation during cellular response to methyl methanesulfonate","synonyms":[{"name":"decreased protein breakdown during cellular response to methyl methanesulfonate","type":"exact"},{"name":"decreased protein catabolic process during cellular response to methyl methanesulfonate","type":"exact"},{"name":"decreased protein catabolism during cellular response to methyl methanesulfonate","type":"exact"},{"name":"decreased protein degradation during cellular response to MMS","type":"exact"},{"name":"decreased protein degradation during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"decreased protein degradation during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"reduced protein degradation during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0007878"}


id: PBO:0055314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2742","termid":"PBO:0055314"}


id: PBO:0117233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane ferric-chelate reductase (NADPH) Frp1","termid":"PBO:0117233"}


id: FYPO:0004016
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of mitochondrial DNA measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:2065367","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA content","termid":"FYPO:0001383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular mtDNA level","synonyms":[{"name":"normal mitochondrial DNA content","type":"exact"},{"name":"normal mitochondrial DNA level","type":"exact"},{"name":"normal mtDNA level","type":"exact"},{"name":"normal mtDNA level during mitotic cell cycle","type":"related"},{"name":"normal mtDNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0004016"}


id: PBO:0071788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P/MRP subunit p21","termid":"PBO:0071788"}


id: PBO:0091028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin complex actin-like protein Arp10","termid":"PBO:0091028"}


id: GO:2000134
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  {"annotated_genes":["SJAG_03591","SJAG_00996","SJAG_02026","SJAG_01401","SJAG_00991","SJAG_05346","SJAG_03048","SJAG_00169","SJAG_01210","SJAG_00071","SJAG_03681"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93557,93971,95139,100689],"is_not":false,"summary":null,"term":"GO:2000134"},{"annotations":[110731,103438,90756,117762,104179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031568"},{"annotations":[111516,93120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"}]},"cv_name":"biological_process","definition":"Any signaling pathway that decreases or inhibits the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G1 phase to S phase of the mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle phase transition","termid":"GO:1901991"},{"relation_name":"is_a","term_name":"negative regulation of cell cycle G1/S phase transition","termid":"GO:1902807"},{"relation_name":"is_a","term_name":"regulation of G1/S transition of mitotic cell cycle","termid":"GO:2000045"},{"relation_name":"negatively_regulates","term_name":"G1/S transition of mitotic cell cycle","termid":"GO:0000082"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00169":null,"SJAG_00991":null,"SJAG_00996":null,"SJAG_01210":null,"SJAG_01401":null,"SJAG_02026":null,"SJAG_03048":null,"SJAG_03591":null,"SJAG_03681":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0044772","GO:0008150"],"is_obsolete":false,"name":"negative regulation of G1/S transition of mitotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000134","terms_by_termid":{"GO:0031568":null,"GO:0031571":null,"GO:2000134":null}}


id: PBO:0070549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 15","termid":"PBO:0070549"}


id: MONDO:0003900
data:
  {"annotated_genes":["SJAG_00321","SJAG_04287","SJAG_03151","SJAG_04541","SJAG_03905","SJAG_03596","SJAG_03785","SJAG_04380","SJAG_03805","SJAG_01884","SJAG_03881","SJAG_01151","SJAG_01748","SJAG_04969","SJAG_00400","SJAG_04865","SJAG_05979","SJAG_03429","SJAG_05213","SJAG_00853","SJAG_04118","SJAG_05239","SJAG_01474","SJAG_01349","SJAG_04077","SJAG_02855","SJAG_01344","SJAG_01013","SJAG_02763","SJAG_03453","SJAG_04290","SJAG_00031","SJAG_02039","SJAG_04569"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89024,89022,89179,89021,89178,89023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018874"},{"annotations":[87128],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012429"},{"annotations":[86957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012471"},{"annotations":[86960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012472"},{"annotations":[87048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014007"},{"annotations":[89090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014629"},{"annotations":[89045],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013944"},{"annotations":[86952,86953,86954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009925"},{"annotations":[87953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0002629"},{"annotations":[87115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[88524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"},{"annotations":[88585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007205"},{"annotations":[87814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007483"},{"annotations":[88440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013766"},{"annotations":[88543,88544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009849"},{"annotations":[87449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007767"},{"annotations":[87450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007768"},{"annotations":[87675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012316"},{"annotations":[86842,86843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012481"},{"annotations":[88479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007908"},{"annotations":[88539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054698"},{"annotations":[88347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054700"},{"annotations":[87211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054699"},{"annotations":[88985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0968983"},{"annotations":[86910,86909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011462"},{"annotations":[88218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024541"},{"annotations":[88069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013818"},{"annotations":[87681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0026777"},{"annotations":[87429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010523"}]},"cv_name":"mondo","definition":"A disease involving the connective tissue.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"musculoskeletal system disorder","termid":"MONDO:0002081"},{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00321":null,"SJAG_00400":null,"SJAG_00853":null,"SJAG_01013":null,"SJAG_01151":null,"SJAG_01344":null,"SJAG_01349":null,"SJAG_01474":null,"SJAG_01748":null,"SJAG_01884":null,"SJAG_02039":null,"SJAG_02763":null,"SJAG_02855":null,"SJAG_03151":null,"SJAG_03429":null,"SJAG_03453":null,"SJAG_03596":null,"SJAG_03785":null,"SJAG_03805":null,"SJAG_03881":null,"SJAG_03905":null,"SJAG_04077":null,"SJAG_04118":null,"SJAG_04287":null,"SJAG_04290":null,"SJAG_04380":null,"SJAG_04541":null,"SJAG_04569":null,"SJAG_04865":null,"SJAG_04969":null,"SJAG_05213":null,"SJAG_05239":null,"SJAG_05979":null},"genotype_count":0,"is_obsolete":false,"name":"connective tissue disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:105969002","NCIT:C26729","UMLS:C0009782","DOID:65","MEDGEN:1098","EFO:1001986","NANDO:2100172","MESH:D003240"],"synonyms":[{"name":"connective tissue disease","type":"exact"},{"name":"connective tissue disease or disorder","type":"exact"},{"name":"connective tissue diseases","type":"exact"},{"name":"connective tissue disorder","type":"exact"},{"name":"connective tissue disorders","type":"exact"},{"name":"disease of connective tissue","type":"exact"},{"name":"disease or disorder of connective tissue","type":"exact"},{"name":"disease, connective tissue","type":"exact"},{"name":"disorder of connective tissue","type":"exact"},{"name":"primary disorder of connective tissue","type":"exact"},{"name":"tissue disease, connective","type":"exact"}],"termid":"MONDO:0003900","terms_by_termid":{"MONDO:0002629":null,"MONDO:0007205":null,"MONDO:0007483":null,"MONDO:0007767":null,"MONDO:0007768":null,"MONDO:0007908":null,"MONDO:0009050":null,"MONDO:0009849":null,"MONDO:0009925":null,"MONDO:0010523":null,"MONDO:0010621":null,"MONDO:0011462":null,"MONDO:0012316":null,"MONDO:0012429":null,"MONDO:0012471":null,"MONDO:0012472":null,"MONDO:0012481":null,"MONDO:0013766":null,"MONDO:0013818":null,"MONDO:0013944":null,"MONDO:0014007":null,"MONDO:0014629":null,"MONDO:0018874":null,"MONDO:0024541":null,"MONDO:0026777":null,"MONDO:0054698":null,"MONDO:0054699":null,"MONDO:0054700":null,"MONDO:0968983":null},"xrefs":{"Monarch":{"xref_id":"0003900"}}}


id: PBO:0075953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAM divergent transcript","termid":"PBO:0075953"}


id: GO:0035725
data:
  {"annotated_genes":["SJAG_04028","SJAG_04167","SJAG_04616","SJAG_01541"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62075,68803,91131],"is_not":false,"summary":null,"term":"GO:0035725"},{"annotations":[68313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036376"}]},"cv_name":"biological_process","definition":"A process in which a sodium ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transport","termid":"GO:0006814"},{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transport","termid":"GO:0098662"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01541":null,"SJAG_04028":null,"SJAG_04167":null,"SJAG_04616":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"sodium ion transmembrane transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"sodium ion membrane transport","type":"exact"}],"termid":"GO:0035725","terms_by_termid":{"GO:0035725":null,"GO:0036376":null}}


id: PBO:0064246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase D family member 5","termid":"PBO:0064246"}


id: PBO:0034360
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-related_via_evidence_or_inference_to","termid":"PBO:0034360"}


id: PBO:0054321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1713","termid":"PBO:0054321"}


id: GO:0046320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fatty acid oxidation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid metabolic process","termid":"GO:0019217"},{"relation_name":"regulates","term_name":"fatty acid oxidation","termid":"GO:0019395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"regulation of fatty acid oxidation","termid":"GO:0046320"}


id: PBO:0040144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anti-silencing function 1A histone chaperone","termid":"PBO:0040144"}


id: PBO:0069423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 686, pseudogene","termid":"PBO:0069423"}


id: PBO:0078831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon CGG) 1-2","termid":"PBO:0078831"}


id: PBO:0084528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the lipid-translocating exporter (LTE) family; present in multiple copies associated with SUC telomeric loci, amplified in yeasts used for industrial biomass or ethanol production with molasses as substrate","termid":"PBO:0084528"}


id: PBO:0054193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1568","termid":"PBO:0054193"}


id: PBO:0091102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic pumilio family RNA-binding protein Puf5","termid":"PBO:0091102"}


id: PBO:0074845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 36B","termid":"PBO:0074845"}


id: PBO:0080953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger BED-type containing 6","termid":"PBO:0080953"}


id: GO:0120210
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Rod telodendria are projections that originate from the rod pedicle and form gap junctions with other photoreceptors within the outer plexiform layer of the retina.","definition_xrefs":["GOC:cvs","GOC:krc","PMID:14755521"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telodendria","termid":"GO:0120208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"rod telodendria","termid":"GO:0120210"}


id: PBO:0000836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfite reductase Sir1","termid":"PBO:0000836"}


id: GO:0106058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcineurin-mediated signaling.","definition_xrefs":["PMID:25081204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium-mediated signaling","termid":"GO:0050850"},{"relation_name":"is_a","term_name":"regulation of calcineurin-mediated signaling","termid":"GO:0106056"},{"relation_name":"positively_regulates","term_name":"calcineurin-mediated signaling","termid":"GO:0097720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of calcineurin-mediated signaling","termid":"GO:0106058"}


id: GO:0061413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription regulation process in which the presence of a nonfermentable carbon source leads to the modulation of the frequency, rate, or extent of transcription, from an RNA polymerase II promoter, of specific genes involved in the metabolism of other carbon sources.","definition_xrefs":["PMID:19686338","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon catabolite regulation of transcription from RNA polymerase II promoter","termid":"GO:0000429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0006355","GO:0008150"],"is_obsolete":false,"name":"regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source","termid":"GO:0061413"}


id: PBO:0033762
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_metaphase_of_meiosis_I","termid":"PBO:0033762"}


id: PBO:0066428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine-glutamic acid dipeptide repeats pseudogene 3","termid":"PBO:0066428"}


id: GO:0052046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of its host organism, mediated by a substance secreted by one of the organisms. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by symbiont of host morphology or physiology via secreted substance (obsolete GO:0052046)","synonyms":[{"name":"modification of host morphology or physiology via effector molecule","type":"narrow"},{"name":"modification of host morphology or physiology via ellicitor","type":"narrow"}],"termid":"GO:0052046"}


id: PBO:0036127
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_movement_within_plasma_membrane","termid":"PBO:0036127"}


id: MONDO:0006953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The mother develops antibodies against red blood cell Rhesus antigens. This may lead to potential fetal adverse outcomes such as anemia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood group incompatibility","termid":"MONDO:0002901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Rh isoimmunization","secondary_identifiers":["DOID:4175","SCTID:44795003","UMLS:C0035404","EFO:1001159","MEDGEN:11224","MedDRA:10039016"],"synonyms":[{"name":"Rh incompatibility affecting management of mother","type":"exact"}],"termid":"MONDO:0006953","xrefs":{"Monarch":{"xref_id":"0006953"}}}


id: PBO:0080325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 89 pseudogene","termid":"PBO:0080325"}


id: MONDO:0001348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Lyme disease (obsolete MONDO:0001348)","termid":"MONDO:0001348","xrefs":{"Monarch":{"xref_id":"0001348"}}}


id: PATO:0000819
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000819 quantity (obsolete PATO:0000819)","termid":"PATO:0000819"}


id: FYPO:0006812
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a protein measured in the RNA polymerase II core complex is lower than normal.","definition_xrefs":["PMID:10503538","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"},{"relation_name":"is_a","term_name":"abnormal protein complex composition","termid":"FYPO:0005003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein level in RNA polymerase II core complex","synonyms":[{"name":"decreased RNA polymerase II core complex protein level during vegetative growth","type":"exact"},{"name":"decreased protein level in RNA polymerase II complex","type":"broad"},{"name":"decreased protein level in RNA polymerase II core complex during mitotic cell cycle","type":"related"},{"name":"decreased protein level in RNA polymerase II core complex during vegetative growth","type":"exact"},{"name":"decreased protein level in RNAP II core complex","type":"exact"},{"name":"reduced protein level in RNA polymerase II core complex","type":"exact"}],"termid":"FYPO:0006812"}


id: PBO:0028438
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_filipin","termid":"PBO:0028438"}


id: GO:1901405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tetrapyrrole catabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of tetrapyrrole metabolic process","termid":"GO:1901402"},{"relation_name":"is_a","term_name":"regulation of tetrapyrrole catabolic process","termid":"GO:1901404"},{"relation_name":"negatively_regulates","term_name":"tetrapyrrole catabolic process","termid":"GO:0033015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"negatively_regulates","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"negative regulation of tetrapyrrole catabolic process","synonyms":[{"name":"down regulation of tetrapyrrole breakdown","type":"exact"},{"name":"down regulation of tetrapyrrole catabolic process","type":"exact"},{"name":"down regulation of tetrapyrrole catabolism","type":"exact"},{"name":"down regulation of tetrapyrrole degradation","type":"exact"},{"name":"down-regulation of tetrapyrrole breakdown","type":"exact"},{"name":"down-regulation of tetrapyrrole catabolic process","type":"exact"},{"name":"down-regulation of tetrapyrrole catabolism","type":"exact"},{"name":"down-regulation of tetrapyrrole degradation","type":"exact"},{"name":"downregulation of tetrapyrrole breakdown","type":"exact"},{"name":"downregulation of tetrapyrrole catabolic process","type":"exact"},{"name":"downregulation of tetrapyrrole catabolism","type":"exact"},{"name":"downregulation of tetrapyrrole degradation","type":"exact"},{"name":"inhibition of tetrapyrrole breakdown","type":"exact"},{"name":"inhibition of tetrapyrrole catabolic process","type":"narrow"},{"name":"inhibition of tetrapyrrole catabolism","type":"exact"},{"name":"inhibition of tetrapyrrole degradation","type":"exact"},{"name":"negative regulation of tetrapyrrole breakdown","type":"exact"},{"name":"negative regulation of tetrapyrrole catabolism","type":"exact"},{"name":"negative regulation of tetrapyrrole degradation","type":"exact"}],"termid":"GO:1901405"}


id: MONDO:1012611
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A liver disorder characterized by chronic conjugated hyperbilirubinemia and gross dark brown to black discoloration of the liver that occurs in sheep.","definition_xrefs":["OMIA:000497-9940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver disorder, non-human animal","termid":"MONDO:1012967"},{"relation_name":"is_a","term_name":"hyperbilirubinemia, non-human animal","termid":"MONDO:1012974"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conjugated hyperbilirubinemia, sheep","synonyms":[{"name":"hyperbilirubinaemia II, sheep","type":"related"}],"termid":"MONDO:1012611","xrefs":{"Monarch":{"xref_id":"1012611"}}}


id: MOD:00906
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-glutamic acid residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified L-glutamic acid residue","synonyms":[{"name":"ModGlu","type":"exact"}],"termid":"MOD:00906"}


id: PBO:0052728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 20","termid":"PBO:0052728"}


id: MONDO:0000728
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The drooping of the upper eyelid.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ptosis","secondary_identifiers":["DOID:0060260","HP:0000508","SCTID:11934000","MESH:D001763","UMLS:C0005745","ICD9:374.30","MEDGEN:2287","ICD9:374.3","NCIT:C27298"],"synonyms":[{"name":"blepharoptosis","type":"exact"},{"name":"drooping eyelid","type":"exact"},{"name":"eyelid ptosis","type":"exact"},{"name":"ptosis","type":"exact"},{"name":"ptosis (disease)","type":"exact"}],"termid":"MONDO:0000728","xrefs":{"Monarch":{"xref_id":"0000728"}}}


id: PBO:0080498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor pseudogene 1","termid":"PBO:0080498"}


id: GO:0072209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mesangial cells of the metanephros as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesangial cell differentiation","termid":"GO:0072007"},{"relation_name":"is_a","term_name":"cell differentiation involved in metanephros development","termid":"GO:0072202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric mesangial cell differentiation","termid":"GO:0072209"}


id: SO:0001469
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tag produced from a single sequencing read from a 5'-RACE product; typically a few hundred base pairs long.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RST","termid":"SO:0001467"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_RST","synonyms":[{"name":"5' RST","type":"related"}],"termid":"SO:0001469"}


id: PBO:0077743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transducer of ERBB2, 2 pseudogene 1","termid":"PBO:0077743"}


id: PBO:0066429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS like estrogen regulated growth inhibitor","termid":"PBO:0066429"}


id: GO:0007555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of ecdysteroid from a cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid hormone secretion","termid":"GO:2000831"},{"relation_name":"regulates","term_name":"ecdysteroid secretion","termid":"GO:0045457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"regulation of ecdysteroid secretion","termid":"GO:0007555"}


id: SO:0001559
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that causes the loss of a polypeptide function with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_function_variant","termid":"SO:0001554"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide_loss_of_function_variant","synonyms":[{"name":"polypeptide loss of function variant","type":"exact"}],"termid":"SO:0001559"}


id: PBO:0086188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein similar to bacterial secreted DfsB proteins; null mutant displays increased levels of spontaneous Rad52p foci; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus","termid":"PBO:0086188"}


id: GO:1901212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac chamber formation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac chamber formation","termid":"GO:1901210"},{"relation_name":"is_a","term_name":"positive regulation of cardiac chamber morphogenesis","termid":"GO:1901221"},{"relation_name":"positively_regulates","term_name":"cardiac chamber formation","termid":"GO:0003207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac chamber formation","synonyms":[{"name":"activation of cardiac chamber formation","type":"narrow"},{"name":"activation of heart chamber formation","type":"exact"},{"name":"positive regulation of heart chamber formation","type":"exact"},{"name":"up regulation of cardiac chamber formation","type":"exact"},{"name":"up regulation of heart chamber formation","type":"exact"},{"name":"up-regulation of cardiac chamber formation","type":"exact"},{"name":"up-regulation of heart chamber formation","type":"exact"},{"name":"upregulation of cardiac chamber formation","type":"exact"},{"name":"upregulation of heart chamber formation","type":"exact"}],"termid":"GO:1901212"}


id: GO:0060038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a cardiac muscle cell population by cell division.","definition_xrefs":["GOC:rph","GOC:dph","PMID:11161571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle cell proliferation","termid":"GO:0014855"},{"relation_name":"part_of","term_name":"cardiac muscle tissue growth","termid":"GO:0055017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle cell proliferation","synonyms":[{"name":"cardiac myocyte proliferation","type":"exact"},{"name":"cardiomyocyte proliferation","type":"related"},{"name":"heart muscle cell proliferation","type":"exact"}],"termid":"GO:0060038"}


id: MOD:01362
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-thiophospho-L-serine.","definition_xrefs":["PubMed:12110917","Unimod:260#S","PubMed:11507762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiophosphorylated residue","termid":"MOD:00583"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-thiophospho-L-serine","synonyms":[{"name":"Thiophospho","type":"related"},{"name":"Thiophosphorylation","type":"related"}],"termid":"MOD:01362"}


id: GO:0061721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 6-sulfoquinovose(1-) resulting in the formation of glycerone phosphate (DHAP) and 3-sulfopropanediol(1-).","definition_xrefs":["PMID:14602517","PMID:24463506","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkanesulfonate metabolic process","termid":"GO:0019694"},{"relation_name":"is_a","term_name":"glycol metabolic process","termid":"GO:0042844"},{"relation_name":"is_a","term_name":"6-sulfoquinovose(1-) catabolic process","termid":"GO:1902777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"6-sulfoquinovose(1-) catabolic process to 3-sulfopropanediol(1-)","secondary_identifiers":["MetaCyc:PWY-7446"],"termid":"GO:0061721"}


id: PBO:0045196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member B7","termid":"PBO:0045196"}


id: MONDO:0011572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing type 1 diabetes mellitus that has material basis in mutation of the locus at chromosome 5q31.1-q33.1.","definition_xrefs":["DOID:0110755","PMID:11175794","MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type 1 diabetes mellitus","termid":"MONDO:0005147"},{"relation_name":"is_a","term_name":"diabetes mellitus, insulin-dependent, X-linked, susceptibility to","termid":"MONDO:0010255"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 1 diabetes mellitus 18","secondary_identifiers":["MEDGEN:344213","MESH:C565315","OMIM:605598","UMLS:C1854125"],"synonyms":[{"name":"IDDM18","type":"exact"},{"name":"diabetes mellitus, insulin-dependent, 18","type":"related"},{"name":"insulin-dependent diabetes mellitus 18","type":"exact"}],"termid":"MONDO:0011572","xrefs":{"Monarch":{"xref_id":"0011572"}}}


id: SO:0001596
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant within a transcript that changes the secondary structure of the RNA product.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_variant","termid":"SO:0001576"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_secondary_structure_variant","synonyms":[{"name":"transcript secondary structure variant","type":"exact"}],"termid":"SO:0001596"}


id: FYPO:0007353
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is normal (i.e. indistinguishable from wild type) at a cis-acting homologous chromosome pairing region on chromosome 2.","definition_xrefs":["PomBase:vw","PomBase:mah","PMID:31811152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal homologous chromosome pairing at cis-acting homologous chromosome pairing region","termid":"FYPO:0003051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal homologous chromosome pairing at cis-acting homologous chromosome pairing region on chromosome 2","synonyms":[{"name":"normal homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region on chromosome 2","type":"exact"},{"name":"normal homologous chromosome pairing at sme2 locus","type":"narrow"},{"name":"normal synapsis at cis-acting homologous chromosome pairing region on chromosome 2","type":"exact"}],"termid":"FYPO:0007353"}


id: MONDO:1012895
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inherited macrothrombocytopenia that occurs in dogs due to a mutation in the TUBB1 gene.","definition_xrefs":["PMID:18466252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thrombocytopenia, dog","termid":"MONDO:1010659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombocytopenia, TUBB1-related, dog","secondary_identifiers":["OMIA:002434-9615"],"termid":"MONDO:1012895","xrefs":{"Monarch":{"xref_id":"1012895"}}}


id: MONDO:0002259
data:
  {"annotated_genes":["SJAG_04398","SJAG_04114","SJAG_04148","SJAG_00301","SJAG_04394","SJAG_04950","SJAG_03051","SJAG_02643","SJAG_03720","SJAG_04337","SJAG_02339","SJAG_00377","SJAG_02954","SJAG_04206","SJAG_00103","SJAG_00630","SJAG_03418","SJAG_03077","SJAG_04110","SJAG_04738","SJAG_02690","SJAG_02294","SJAG_02426","SJAG_04703","SJAG_02829","SJAG_03698"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009916"},{"annotations":[87605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:8000015"},{"annotations":[88110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012794"},{"annotations":[87188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008840"},{"annotations":[88667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008980"},{"annotations":[87998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010814"},{"annotations":[87746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009258"},{"annotations":[87279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009514"},{"annotations":[86988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010961"},{"annotations":[88286,88287,88288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008170"},{"annotations":[88756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030736"},{"annotations":[87420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013689"},{"annotations":[88185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054850"},{"annotations":[89015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013972"},{"annotations":[87790],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014126"},{"annotations":[86827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0976232"},{"annotations":[88491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014497"},{"annotations":[87406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014843"},{"annotations":[88202,88203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054862"},{"annotations":[87491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030870"},{"annotations":[87899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958035"},{"annotations":[88818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010350"},{"annotations":[88390,88391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014321"}]},"cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder that affects the testis or the ovary.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00103":null,"SJAG_00301":null,"SJAG_00377":null,"SJAG_00630":null,"SJAG_02294":null,"SJAG_02339":null,"SJAG_02426":null,"SJAG_02643":null,"SJAG_02690":null,"SJAG_02829":null,"SJAG_02954":null,"SJAG_03051":null,"SJAG_03077":null,"SJAG_03418":null,"SJAG_03698":null,"SJAG_03720":null,"SJAG_04110":null,"SJAG_04114":null,"SJAG_04148":null,"SJAG_04206":null,"SJAG_04337":null,"SJAG_04394":null,"SJAG_04398":null,"SJAG_04703":null,"SJAG_04738":null,"SJAG_04950":null},"genotype_count":0,"is_obsolete":false,"name":"gonadal disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0018050","MEDGEN:9074","DOID:2277","MESH:D006058","NCIT:C26786"],"synonyms":[{"name":"disease of gonad","type":"exact"},{"name":"disease or disorder of gonad","type":"exact"},{"name":"disorder of gonad","type":"exact"},{"name":"disorder of gonads","type":"exact"},{"name":"gonad disease","type":"exact"},{"name":"gonad disease or disorder","type":"exact"},{"name":"gonadal disorder","type":"exact"},{"name":"gonadal disorders","type":"exact"}],"termid":"MONDO:0002259","terms_by_termid":{"MONDO:0008170":null,"MONDO:0008840":null,"MONDO:0008980":null,"MONDO:0009258":null,"MONDO:0009514":null,"MONDO:0009916":null,"MONDO:0010350":null,"MONDO:0010814":null,"MONDO:0010961":null,"MONDO:0012794":null,"MONDO:0013689":null,"MONDO:0013972":null,"MONDO:0014126":null,"MONDO:0014321":null,"MONDO:0014497":null,"MONDO:0014843":null,"MONDO:0030736":null,"MONDO:0030870":null,"MONDO:0054850":null,"MONDO:0054862":null,"MONDO:0958035":null,"MONDO:0976232":null,"MONDO:8000015":null},"xrefs":{"Monarch":{"xref_id":"0002259"}}}


id: PBO:0076824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminal nucleotidyltransferase 5C","termid":"PBO:0076824"}


id: PBO:0011959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial_nucleotide_deletion","termid":"PBO:0011959"}


id: PBO:0075370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 8","termid":"PBO:0075370"}


id: GO:0033240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving amines.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"positively_regulates","term_name":"amine metabolic process","termid":"GO:0009308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of amine metabolic process","synonyms":[{"name":"positive regulation of amine metabolism","type":"exact"},{"name":"positive regulation of cellular amine metabolic process","type":"exact"}],"termid":"GO:0033240"}


id: PBO:0116639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF guanine nucleotide exchange factor 2","termid":"PBO:0116639"}


id: GO:1990112
data:
  {"annotated_genes":["SJAG_01134","SJAG_00188","SJAG_01074","SJAG_03345","SJAG_01497","SJAG_04384"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71581,75275,78364,91072,105788,106645],"is_not":false,"summary":null,"term":"GO:1990112"}]},"cv_name":"cellular_component","definition":"A multiprotein complex that forms a stable complex with large ribosomal subunits (60S in eukaryotes and 50S in prokaryotes) containing stalled polypeptides and triggers their degradation (ribosomal quality control). In budding yeast, this complex includes Cdc48p, Rkr1p, Tae2p, Rqc1p, Npl4p and Ufd1p proteins.","definition_xrefs":["GOC:rb","PMID:23232563","PMID:23178123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00188":null,"SJAG_01074":null,"SJAG_01134":null,"SJAG_01497":null,"SJAG_03345":null,"SJAG_04384":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"RQC complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ribosome quality control complex","type":"exact"},{"name":"ribosome-bound quality control complex","type":"exact"}],"termid":"GO:1990112","terms_by_termid":{"GO:1990112":null}}


id: GO:0043907
data:
  {"annotated_genes":["SJAG_01259"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107753],"is_not":false,"summary":null,"term":"GO:0043907"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cysteinyl-tRNA(Pro) + H2O = tRNA(Pro) + L-cysteine + H+.","definition_xrefs":["GOC:jl","PMID:15886196","RHEA:25351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA deacylase activity","termid":"GO:0002161"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0140098","GO:0003674","GO:0003824","GO:0140101"],"is_obsolete":false,"name":"Cys-tRNA(Pro) deacylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.6.1.n2"],"synonyms":[{"name":"Cys-tRNA(Pro) deacetylase activity","type":"exact"},{"name":"Cys-tRNAPro hydrolase activity","type":"exact"}],"termid":"GO:0043907","terms_by_termid":{"GO:0043907":null}}


id: GO:0120315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of oocyte karyosome formation, the chromosome organization process in which meiotic chromosomes in the oocyte nucleus cluster together to form a compact spherical structure called the karyosome.","definition_xrefs":["PMID:33382409","GOC:ha","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of oocyte karyosome formation","termid":"GO:0120313"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"is_a","term_name":"positive regulation of chromosome organization","termid":"GO:2001252"},{"relation_name":"positively_regulates","term_name":"oocyte karyosome formation","termid":"GO:0030717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of oocyte karyosome formation","termid":"GO:0120315"}


id: RO:0002209
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of parasitoid of","direct_ancestors":[{"relation_name":"is_a","term_name":"parasitized_by","termid":"RO:0002445"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_parasitoid","termid":"RO:0002209"}


id: FYPO:0005000
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is not normally found in the nucleus is observed there during interphase of a mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to nucleus during vegetative growth","termid":"FYPO:0000784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"protein mislocalized to nucleus during mitotic interphase","synonyms":[{"name":"ectopic protein localization to nucleus during mitotic interphase","type":"exact"},{"name":"protein mislocalised to nucleus during interphase during vegetative growth","type":"exact"},{"name":"protein mislocalised to nucleus during mitotic interphase","type":"exact"},{"name":"protein mislocalized to nucleus during interphase during vegetative growth","type":"exact"},{"name":"protein mislocalized to nucleus during interphase of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0005000"}


id: MONDO:0700015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosomal disorder in which chromosome 8 is affected.","definition_xrefs":["MONDO:patterns/chromosome_type"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal anomaly","termid":"MONDO:0020049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 8 disorder","secondary_identifiers":["UMLS:C0265418","SCTID:48082007","MEDGEN:539233"],"synonyms":[{"name":"anomaly of chromosome pair 8","type":"exact"}],"termid":"MONDO:0700015","xrefs":{"Monarch":{"xref_id":"0700015"}}}


id: PBO:0110871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small endoribonuclease with 2 transmembrane domains, RNASEK, poorly chracterized protein implicated in endocytic pathway, vacuolar pricesses, protection against virus's","termid":"PBO:0110871"}


id: PBO:0003226
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Functional Homologue of Nce102","termid":"PBO:0003226"}


id: GO:0002580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antigen processing and presentation of antigen (peptide or polysaccharide) via MHC class II.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation","termid":"GO:0002577"},{"relation_name":"regulates","term_name":"antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","synonyms":[{"name":"regulation of peptide or polysaccharide antigen processing and presentation via MHC class II","type":"exact"}],"termid":"GO:0002580"}


id: FYPO:0001122
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121079,121149,121161],"is_not":false,"summary":null,"term":"FYPO:0001122"},{"annotations":[121346],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell is longer, and has a greater length:diameter ratio, than normal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"increased vegetative cell length","termid":"FYPO:0006634"},{"relation_name":"is_a","term_name":"elongated cell","termid":"FYPO:0000017"},{"relation_name":"is_a","term_name":"increased vegetative cell length","termid":"FYPO:0006634"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02592":null,"SJAG_04312":null,"SJAG_04332":null},"genotype_count":4,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000005","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"elongated vegetative cell","references_by_uniquename":{"PMID:25866389":null,"PMID:27678009":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_00266","SJAG_04332","SJAG_04312"],"single_locus_genotype_uniquenames":["sty1delta","pka1delta","atf1delta","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"long vegetative cell","type":"exact"}],"termid":"FYPO:0001122","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000102":null,"FYECO:0000137":null,"FYPO:0001122":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000003":null}}


id: PBO:0083441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified and essential ORF SPT6/YGR115C","termid":"PBO:0083441"}


id: MONDO:0100258
data:
  {"annotated_genes":["SJAG_00326"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009958"}]},"cv_name":"mondo","definition":"Any disorder of peroxisomal alpha oxidation in which the cause of the disease is a mutation in the PHYH gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of peroxisomal alpha oxidation","termid":"MONDO:0100277"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00326":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0019053","MONDO:0005066"],"is_obsolete":false,"name":"phytanoyl-CoA hydroxylase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"PHYH deficiency","type":"exact"},{"name":"PHYH related disorder of peroxisomal alpha oxidation","type":"exact"},{"name":"phytanoyl-CoA hydroxylase deficiency","type":"exact"}],"termid":"MONDO:0100258","terms_by_termid":{"MONDO:0009958":null},"xrefs":{"Monarch":{"xref_id":"0100258"}}}


id: PBO:0045140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal assembly factor 9","termid":"PBO:0045140"}


id: PBO:0075771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRSF2 pseudogene 1","termid":"PBO:0075771"}


id: PBO:0005735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrin methyltransferase (predicted)","termid":"PBO:0005735"}


id: PBO:0011089
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulated by different signals","termid":"PBO:0011089"}


id: PBO:0038591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACAD9 divergent transcript","termid":"PBO:0038591"}


id: GO:0102039
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a hydroperoxide + H+ + NADH = an alcohol + H2O + NAD+.","definition_xrefs":["RHEA:62628","GOC:pz","PMID:12517450"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxiredoxin activity","termid":"GO:0051920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0051920"}],"interesting_parent_ids":["GO:0051920","GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"NADH-dependent peroxiredoxin activity","secondary_identifiers":["EC:1.11.1.26","MetaCyc:R4-RXN","Reactome:R-HSA-1222526"],"synonyms":[{"name":"alkylhydroperoxide reductase activity","type":"exact"}],"termid":"GO:0102039"}


id: PBO:0090871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial leucine-tRNA ligase","termid":"PBO:0090871"}


id: PBO:0000697
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.105","termid":"PBO:0000697"}


id: PBO:0079012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon TGT) 6-1","termid":"PBO:0079012"}


id: PBO:0077024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioesterase superfamily member 6","termid":"PBO:0077024"}


id: PBO:0038326
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_biological_role","termid":"PBO:0038326"}


id: MONDO:8000015
data:
  {"annotated_genes":["SJAG_03077"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87605],"is_not":false,"summary":null,"term":"MONDO:8000015"}]},"cv_name":"mondo","definition":"Any 46,XY complete gonadal dysgenesis in which the cause of the disease is a mutation in the DHX37 gene.","definition_xrefs":["OMIM:273250","MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"46,XY complete gonadal dysgenesis","termid":"MONDO:0010765"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03077":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"46,XY sex reversal 11","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16552","Orphanet:983","MedDRA:10002641","UMLS:C0266427","SCTID:53599007","ICD9:752.89","MESH:C537770","MEDGEN:78602"],"synonyms":[{"name":"46, XY sex reversal 11","type":"exact"},{"name":"ETRS","type":"exact"},{"name":"SRXY11","type":"exact"},{"name":"TRS","type":"exact"},{"name":"XY gonadal agenesis syndrome","type":"related"},{"name":"anorchia, familial","type":"related"},{"name":"embryonic testicular regression syndrome","type":"exact"},{"name":"testicular regression syndrome","type":"exact"},{"name":"testicular regression, embryonic","type":"related"},{"name":"vanishing testes syndrome","type":"exact"},{"name":"vanishing testis syndrome","type":"exact"}],"termid":"MONDO:8000015","terms_by_termid":{"MONDO:8000015":null},"xrefs":{"Monarch":{"xref_id":"8000015"}}}


id: MONDO:0018185
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital anomaly of the great veins (obsolete MONDO:0018185)","secondary_identifiers":["Orphanet:363189"],"termid":"MONDO:0018185","xrefs":{"Monarch":{"xref_id":"0018185"}}}


id: GO:0140561
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + [protein with EGF-like domain]-L-serine = UDP + [protein with EGF-like domain]-3-O-(beta-D-glucosyl)-L-serine.","definition_xrefs":["RHEA:58116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"EGF-domain serine glucosyltransferase activity","secondary_identifiers":["EC:2.4.1.376"],"termid":"GO:0140561"}


id: PR:O74335
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rga5 gene.","definition_xrefs":["UniProtKB:O74335","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho-GTPase-activating protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17F3.01c","synonyms":[{"name":"Spom972h-rga5","type":"exact"}],"termid":"PR:O74335"}


id: GO:0075234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the directed movement of a zoospore on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete zoospore movement on or near host (obsolete GO:0075234)","synonyms":[{"name":"zoospore motility on or near host","type":"exact"}],"termid":"GO:0075234"}


id: GO:0039647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host poly(A)-binding protein (PABP) activity. PABP binds to the poly(A) tail of mRNA to facilitate translation.","definition_xrefs":["UniProtKB-KW:KW-1101"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host poly(A)-binding protein activity (obsolete GO:0039647)","synonyms":[{"name":"inhibition of host poly(A)-binding protein by virus","type":"exact"},{"name":"suppression by virus of host PABP activity","type":"exact"}],"termid":"GO:0039647"}


id: PBO:0057758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1972-1","termid":"PBO:0057758"}


id: GO:0050613
data:
  {"annotated_genes":["SJAG_04810"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[82078],"is_not":false,"summary":null,"term":"GO:0050613"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + 4,4-dimethyl-5-alpha-cholesta-8,24-dien-3-beta-ol = NADPH + H+ + 4,4-dimethyl-5-alpha-cholesta-8,14,24-trien-3-beta-ol.","definition_xrefs":["EC:1.3.1.70"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04810":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"Delta14-sterol reductase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:18561","MetaCyc:RXN66-14","Reactome:R-HSA-194698","GO:0000251","Reactome:R-HSA-194674"],"synonyms":[{"name":"4,4-dimethyl-5alpha-cholesta-8,24-dien-3beta-ol:NADP+ delta14-oxidoreductase activity","type":"related"},{"name":"C-14 sterol reductase activity","type":"exact"},{"name":"D14-sterol reductase activity","type":"exact"},{"name":"sterol C-14 reductase activity","type":"exact"},{"name":"sterol C14-reductase activity","type":"related"}],"termid":"GO:0050613","terms_by_termid":{"GO:0050613":null}}


id: MONDO:0015017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any anterior segment dysgenesis in which the cause of the disease is a mutation in the CPAMD8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior segment dysgenesis","termid":"MONDO:0019503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"anterior segment dysgenesis 8","secondary_identifiers":["GARD:17954","UMLS:C4310622","OMIM:617319","MEDGEN:934589","DOID:0080613","Orphanet:519388"],"synonyms":[{"name":"ASGD8","type":"exact"},{"name":"CPAMD8 anterior segment dysgenesis","type":"exact"},{"name":"CPAMD8-related anterior segment dysgenesis","type":"exact"},{"name":"anterior segment dysgenesis 8","type":"exact"},{"name":"anterior segment dysgenesis caused by mutation in CPAMD8","type":"exact"},{"name":"anterior segment dysgenesis type 8","type":"exact"}],"termid":"MONDO:0015017","xrefs":{"Monarch":{"xref_id":"0015017"}}}


id: MONDO:0015227
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic limb malformation (obsolete MONDO:0015227)","secondary_identifiers":["Orphanet:109011"],"synonyms":[{"name":"isolated limb malformation","type":"related"},{"name":"nonsyndromic limb malformation","type":"exact"}],"termid":"MONDO:0015227","xrefs":{"Monarch":{"xref_id":"0015227"}}}


id: GO:0008768
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-sugar + H2O = UMP + sugar 1-phosphate.","definition_xrefs":["EC:3.6.1.45"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"UDP-sugar diphosphatase activity","secondary_identifiers":["Reactome:R-HSA-6810464","MetaCyc:UDPSUGARHYDRO-RXN"],"synonyms":[{"name":"UDP-sugar hydrolase activity","type":"related"},{"name":"UDP-sugar pyrophosphatase activity","type":"related"},{"name":"UDP-sugar sugarphosphohydrolase activity","type":"related"},{"name":"nucleosidediphosphate-sugar diphosphatase activity","type":"broad"},{"name":"nucleosidediphosphate-sugar pyrophosphatase activity","type":"broad"}],"termid":"GO:0008768"}


id: _global:has_dividend_entity
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_dividend_entity","termid":"_global:has_dividend_entity"}


id: PBO:0051478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (IV)/OR22-2 (pseudogene)","termid":"PBO:0051478"}


id: PBO:0046352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 10","termid":"PBO:0046352"}


id: MONDO:0005005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant epithelial neoplasm of the kidney characterized by the presence of lipid-containing clear cells within a vascular network. The tumor may metastasize to unusual sites and late metastasis is common.","definition_xrefs":["NCIT:C4033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clear cell adenocarcinoma","termid":"MONDO:0005004"},{"relation_name":"is_a","term_name":"renal cell adenocarcinoma","termid":"MONDO:0005549"},{"relation_name":"is_a","term_name":"nonpapillary renal cell carcinoma","termid":"MONDO:0007763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"clear cell renal carcinoma","secondary_identifiers":["UMLS:C0279702","ICD9:189.0","EFO:0000349","GARD:9574","MEDGEN:76018","ONCOTREE:CCRCC","Orphanet:319276","SCTID:254915003","DOID:4467"],"synonyms":[{"name":"Grawitz tumor","type":"exact"},{"name":"Grawitz tumour","type":"exact"},{"name":"RCC, clear cell adenocarcinoma","type":"exact"},{"name":"clear cell adenocarcinoma of kidney","type":"exact"},{"name":"clear cell adenocarcinoma of the kidney","type":"exact"},{"name":"clear cell adenocarcinoma, kidney","type":"exact"},{"name":"clear cell carcinoma of kidney","type":"exact"},{"name":"clear cell carcinoma of the kidney","type":"exact"},{"name":"clear cell kidney carcinoma","type":"exact"},{"name":"clear cell renal cell cancer","type":"exact"},{"name":"clear cell renal cell carcinoma","type":"exact"},{"name":"clear-cell metastatic renal cell carcinoma","type":"related"},{"name":"conventional (clear cell) renal cell adenocarcinoma","type":"exact"},{"name":"conventional (clear cell) renal cell carcinoma","type":"exact"},{"name":"conventional renal cell carcinoma","type":"exact"},{"name":"hypernephroma","type":"related"},{"name":"kidney clear cell adenocarcinoma","type":"exact"},{"name":"kidney clear cell carcinoma","type":"exact"},{"name":"renal cell carcinoma, clear cell adenocarcinoma","type":"exact"},{"name":"renal clear cell adenocarcinoma","type":"exact"},{"name":"renal clear cell carcinoma","type":"exact"}],"termid":"MONDO:0005005","xrefs":{"Monarch":{"xref_id":"0005005"}}}


id: GO:0047846
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a deoxynucleoside 3'-phosphate + H2O = a deoxynucleoside + phosphate.","definition_xrefs":["EC:3.1.3.34","MetaCyc:DEOXYNUCLEOTIDE-3-PHOSPHATASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"deoxynucleotide 3'-phosphatase activity","secondary_identifiers":["RHEA:10092"],"synonyms":[{"name":"3'-deoxynucleotidase activity","type":"related"},{"name":"3'-deoxyribonucleotidase activity","type":"related"},{"name":"deoxyribonucleotide 3'-phosphohydrolase activity","type":"related"}],"termid":"GO:0047846"}


id: MONDO:0007772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pseudohypoaldosteronism type 2","termid":"MONDO:0019162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"pseudohypoaldosteronism type 2A","secondary_identifiers":["SCTID:703254001","MEDGEN:327088","GARD:16775","icd11.foundation:646091849","OMIM:145260","Orphanet:88938","UMLS:C1840389"],"synonyms":[{"name":"Gordon hyperkalemia-hypertension syndrome","type":"related"},{"name":"PHA2A","type":"exact"},{"name":"hyperpotassemia and hypertension, familial","type":"related"},{"name":"hypertensive hyperkalemia, familial","type":"related"},{"name":"pseudohypoaldosteronism, type IIA","type":"related"}],"termid":"MONDO:0007772","xrefs":{"Monarch":{"xref_id":"0007772"}}}


id: GO:0046356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of acetyl-CoA, a derivative of coenzyme A in which the sulfhydryl group is acetylated.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyl-CoA metabolic process","termid":"GO:0006084"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"purine-containing compound catabolic process","termid":"GO:0072523"},{"relation_name":"is_a","term_name":"nucleoside phosphate catabolic process","termid":"GO:1901292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"acetyl-CoA catabolic process","synonyms":[{"name":"acetyl-CoA breakdown","type":"exact"},{"name":"acetyl-CoA catabolism","type":"exact"},{"name":"acetyl-CoA degradation","type":"exact"}],"termid":"GO:0046356"}


id: MONDO:0003704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An unusual condition characterized by the presence of numerous small benign smooth muscle neoplasms located throughout the body of the uterus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyomatosis","termid":"MONDO:0003295"},{"relation_name":"is_a","term_name":"uterine corpus leiomyoma","termid":"MONDO:0007886"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine corpus diffuse leiomyomatosis","secondary_identifiers":["DOID:5917","MEDGEN:275556","UMLS:C1519855","NCIT:C40170","DOID:5916"],"synonyms":[{"name":"body of uterus leiomyomatosis","type":"exact"},{"name":"leiomyomatosis of body of uterus","type":"exact"},{"name":"uterine corpus diffuse leiomyomatosis","type":"exact"},{"name":"uterine corpus leiomyomatosis","type":"exact"}],"termid":"MONDO:0003704","xrefs":{"Monarch":{"xref_id":"0003704"}}}


id: PATO:0000596
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A volume which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased size","termid":"PATO:0000587"},{"relation_name":"is_a","term_name":"volume","termid":"PATO:0000918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased volume","synonyms":[{"name":"low volume","type":"exact"},{"name":"small volume","type":"related"}],"termid":"PATO:0000596"}


id: FYPO:0001664
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of cyclic AMP measured in a cell is higher than normal during a cellular response to glucose stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular cAMP level","termid":"FYPO:0001661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular cAMP level during cellular response to glucose stimulus","synonyms":[{"name":"increased cAMP accumulation during cellular response to glucose stimulus","type":"related"},{"name":"increased cellular cAMP level in response to glucose stimulus","type":"exact"},{"name":"increased cellular cyclic AMP level during cellular response to glucose stimulus","type":"exact"}],"termid":"FYPO:0001664"}


id: PBO:0038889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adducin 2","termid":"PBO:0038889"}


id: PBO:0043474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNOT10 antisense RNA 1","termid":"PBO:0043474"}


id: MONDO:0013738
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive nonsyndromic deafness that has material basis in variation in the chromosome region 1p36.31-p36.13.","definition_xrefs":["DOID:0110538","PMID:21937999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 96","secondary_identifiers":["GARD:22642","MEDGEN:854865","UMLS:C3888337","OMIM:614414"],"synonyms":[{"name":"DFNB96","type":"narrow"},{"name":"autosomal recessive deafness 96","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 96","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 96","type":"narrow"},{"name":"deafness, autosomal recessive 96","type":"narrow"}],"termid":"MONDO:0013738","xrefs":{"Monarch":{"xref_id":"0013738"}}}


id: PBO:0087050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L23B; homologous to mammalian ribosomal protein L23 and bacterial L14; RPL23B has a paralog, RPL23A, that arose from the whole genome duplication","termid":"PBO:0087050"}


id: MONDO:0054701
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Kleefstra syndrome","termid":"MONDO:0012455"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kleefstra syndrome 2","secondary_identifiers":["UMLS:C4540395","GARD:18382","OMIM:617768","DOID:0080598","MEDGEN:1623903"],"synonyms":[{"name":"KLEFS2","type":"related"},{"name":"Kleefstra syndrome 2","type":"exact"}],"termid":"MONDO:0054701","xrefs":{"Monarch":{"xref_id":"0054701"}}}


id: PBO:0086786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; analysis of HA-tagged protein suggests a membrane localization","termid":"PBO:0086786"}


id: MONDO:0017447
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Congenital absence/hypoplasia of thumb is a rare developmental defect during embryogenesis characterized by underdevelopment of the thumb, ranging from a slight decrease in thumb size to complete absence of the thumb. The malformation may occur isolated, combined to other defects of the hand or upper limb, or as part of a multiple congenital anomaly syndrome.","definition_xrefs":["Orphanet:294988"],"gene_count":0,"genotype_count":0,"name":"obsolete congenital absence/hypoplasia of thumb (obsolete MONDO:0017447)","synonyms":[{"name":"thumb hypodactyly","type":"exact"},{"name":"thumb oligodactyly","type":"exact"}],"termid":"MONDO:0017447","xrefs":{"Monarch":{"xref_id":"0017447"}}}


id: GO:0018801
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-glutaconyl-CoA + H+ = but-2-enoyl-CoA + CO2.","definition_xrefs":["RHEA:23972","PMID:11248185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decarboxylation-driven active transmembrane transporter activity","termid":"GO:0015451"},{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0005215","GO:0022857","GO:0016829"],"is_obsolete":false,"name":"glutaconyl-CoA decarboxylase activity","secondary_identifiers":["MetaCyc:GLUTACONYL-COA-DECARBOXYLASE-RXN","EC:7.2.4.5","KEGG_REACTION:R03028","UM-BBD_reactionID:r0199"],"synonyms":[{"name":"4-carboxybut-2-enoyl-CoA carboxy-lyase (but-2-enoyl-CoA-forming)","type":"exact"},{"name":"4-carboxybut-2-enoyl-CoA carboxy-lyase activity","type":"related"},{"name":"glutaconyl coenzyme A decarboxylase activity","type":"related"},{"name":"pent-2-enoyl-CoA carboxy-lyase activity","type":"related"}],"termid":"GO:0018801"}


id: MONDO:0018614
data:
  {"annotated_genes":["SJAG_01851","SJAG_01059","SJAG_02084","SJAG_04157","SJAG_02848","SJAG_02180","SJAG_02384","SJAG_01797"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014392"},{"annotations":[87040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014593"},{"annotations":[87050,87051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014598"},{"annotations":[87014,87012,87013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014625"},{"annotations":[88967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014933"}]},"cv_name":"mondo","definition":"A rare infantile epilepsy syndrome characterized by early onset of seizures of variable type and severity, potentially associated with a spectrum of clinical signs and symptoms including delay or lack of psychomotor development, intellectual disability, poor or absent speech development, behavioral abnormalities, hypotonia, movement disorders, spasticity, microcephaly, and dysmorphic facial features, among others. Brain imaging findings are also variable and may include cerebral atrophy or white matter abnormalities.","definition_xrefs":["Orphanet:442835"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid transport","termid":"MONDO:0019216"},{"relation_name":"is_a","term_name":"neonatal epilepsy syndrome","termid":"MONDO:0020070"},{"relation_name":"is_a","term_name":"infantile epilepsy syndrome","termid":"MONDO:0020071"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01059":null,"SJAG_01797":null,"SJAG_01851":null,"SJAG_02084":null,"SJAG_02180":null,"SJAG_02384":null,"SJAG_02848":null,"SJAG_04157":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005027","MONDO:0004736"],"is_obsolete":false,"name":"undetermined early-onset epileptic encephalopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15028","UMLS:C5680057","MEDGEN:1826068"],"synonyms":[{"name":"non-specific early-onset epileptic encephalopathy","type":"exact"},{"name":"undetermined EOEE","type":"exact"},{"name":"undetermined early-onset epileptic encephalopathy","type":"exact"}],"termid":"MONDO:0018614","terms_by_termid":{"MONDO:0014392":null,"MONDO:0014593":null,"MONDO:0014598":null,"MONDO:0014625":null,"MONDO:0014933":null},"xrefs":{"Monarch":{"xref_id":"0018614"}}}


id: PBO:0057112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 200a","termid":"PBO:0057112"}


id: MONDO:0016829
data:
  {"annotated_genes":["SJAG_03703","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88331,88332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859157"}]},"cv_name":"mondo","definition":"A rare hereditary myopathic degeneration of both gastrointestinal and urinary tracts that causes chronic intestinal pseudo-obstruction. It usually presents after the first decade of life with megaduodenum, megacystis and symptoms such as abdominal distension and/or pain, vomiting, constipation, diarrhea, dysphagia, and/or urinary tract infections.n.","definition_xrefs":["Orphanet:2604"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete megacystis-microcolon-intestinal hypoperistalsis syndrome (obsolete MONDO:0007960)","termid":"MONDO:0007960"},{"relation_name":"is_a","term_name":"visceral myopathy 1","termid":"MONDO:0020754"},{"relation_name":"is_a","term_name":"intestinal motility disease","termid":"MONDO:0021189"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"familial visceral myopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:359.89","SCTID:63684002","UMLS:C0266833","GARD:3443","icd11.foundation:1838806574","MEDGEN:120590"],"synonyms":[{"name":"familial hollow visceral myopathy","type":"exact"},{"name":"hereditary hollow visceral myopathy","type":"exact"},{"name":"megaduodenum and/or megacystis","type":"exact"},{"name":"pseudoobstruction idiopathic intestinal","type":"related"},{"name":"visceral myopathy familial","type":"related"}],"termid":"MONDO:0016829","terms_by_termid":{"MONDO:0859157":null},"xrefs":{"Monarch":{"xref_id":"0016829"}}}


id: PBO:0028982
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_mitotic_spindle_elongation","termid":"PBO:0028982"}


id: GO:0018930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving methylquinoline, an aromatic compound composed of a benzene ring and a heterocyclic N-containing ring.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"methylquinoline metabolic process","secondary_identifiers":["UM-BBD_pathwayID:mqn"],"synonyms":[{"name":"2-methylquinoline metabolic process","type":"narrow"},{"name":"2-methylquinoline metabolism","type":"narrow"},{"name":"3-methylquinoline metabolic process","type":"narrow"},{"name":"3-methylquinoline metabolism","type":"narrow"},{"name":"quinaldine metabolic process","type":"narrow"},{"name":"quinaldine metabolism","type":"narrow"}],"termid":"GO:0018930"}


id: PBO:0084220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homoserine kinase; conserved protein required for threonine biosynthesis; long-lived protein that is preferentially retained in mother cells and forms cytoplasmic filaments; expression is regulated by the GCN4-mediated general amino acid control pathway","termid":"PBO:0084220"}


id: PBO:0068131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 438","termid":"PBO:0068131"}


id: PR:Q9UUK3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An OTU domain-containing protein 6B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin thioesterase otu2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.03","secondary_identifiers":["UniProtKB:Q9UUK3"],"synonyms":[{"name":"OTU domain-containing protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC1952.03","type":"related"},{"name":"Spom972h-OTUD6B","type":"exact"}],"termid":"PR:Q9UUK3"}


id: GO:0047586
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5'-acylphosphoadenosine + H2O = AMP + a carboxylate.","definition_xrefs":["MetaCyc:5-ACYLPHOSPHOADENOSINE-HYDROLASE-RXN","EC:3.6.1.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides","termid":"GO:0016818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"5'-acylphosphoadenosine hydrolase activity","secondary_identifiers":["RHEA:16837"],"synonyms":[{"name":"5'-acylphosphoadenosine acylhydrolase activity","type":"related"},{"name":"5-phosphoadenosine hydrolase activity","type":"related"}],"termid":"GO:0047586"}


id: GO:0034576
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: N-isopropylacetanilide + OH- = N-isopropylaniline + acetate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete N-isopropylacetanilide amidohydrolase activity (obsolete GO:0034576)","termid":"GO:0034576"}


id: PBO:0068916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 159, pseudogene","termid":"PBO:0068916"}


id: GO:0048047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The behavior of individuals for the purpose of discriminating between the sexes, for the purpose of finding a suitable mating partner.","definition_xrefs":["PMID:12486700","GOC:pr","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating behavior","termid":"GO:0007617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mating behavior, sex discrimination","synonyms":[{"name":"mating behaviour, sex discrimination","type":"exact"}],"termid":"GO:0048047"}


id: PBO:0047942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(14)(q24.1)","termid":"PBO:0047942"}


id: PATO:0000455
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A maturity quality inhering in a bearer by virtue of the bearer's having arrived at the onset of puberty (the age at which sex glands become functional) but not yet fully mature.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity","termid":"PATO:0000261"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pubescent","termid":"PATO:0000455"}


id: PBO:0034665
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-thin_stable_microtubule_bundle","termid":"PBO:0034665"}


id: GO:0070208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a protein heterotrimer, a macromolecular structure consisting of three noncovalently associated subunits, of which not all are identical.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein heterooligomerization","termid":"GO:0051291"},{"relation_name":"is_a","term_name":"protein trimerization","termid":"GO:0070206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"protein heterotrimerization","synonyms":[{"name":"protein heterotrimer assembly","type":"exact"},{"name":"protein heterotrimer biosynthesis","type":"exact"},{"name":"protein heterotrimer biosynthetic process","type":"exact"},{"name":"protein heterotrimer formation","type":"exact"}],"termid":"GO:0070208"}


id: GO:0031096
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membranes of the platelet dense tubular network.","definition_xrefs":["GOC:mah","PMID:1322202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"platelet dense tubular network","termid":"GO:0031094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"platelet dense tubular network lumen","termid":"GO:0031096"}


id: PBO:0084737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial intermembrane space protein; forms a complex with Tim8p that delivers a subset of hydrophobic proteins to the TIM22 complex for insertion into the inner membrane","termid":"PBO:0084737"}


id: GO:0045583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cytotoxic T cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell differentiation","termid":"GO:0045580"},{"relation_name":"regulates","term_name":"cytotoxic T cell differentiation","termid":"GO:0045065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cytotoxic T cell differentiation","synonyms":[{"name":"regulation of cytotoxic T cell development","type":"related"},{"name":"regulation of cytotoxic T lymphocyte differentiation","type":"exact"},{"name":"regulation of cytotoxic T-cell differentiation","type":"exact"},{"name":"regulation of cytotoxic T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0045583"}


id: FYPO:0005246
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing melibiose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002057","FYPO:0002060","FYPO:0000139","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"decreased cell population growth on melibiose carbon source","synonyms":[{"name":"decreased growth on melibiose carbon source","type":"broad"},{"name":"decreased vegetative cell growth on melibiose carbon source","type":"exact"},{"name":"reduced cell growth on melibiose carbon source","type":"related"},{"name":"slow cell growth on melibiose carbon source","type":"narrow"}],"termid":"FYPO:0005246"}


id: PBO:0057292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 510","termid":"PBO:0057292"}


id: PBO:0055105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2523","termid":"PBO:0055105"}


id: PBO:0067707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal 5","termid":"PBO:0067707"}


id: PBO:0031498
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_alkalinity","termid":"PBO:0031498"}


id: GO:0075186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of symbiont infection cushion formation on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of infection cushion formation","termid":"GO:0075184"},{"relation_name":"negatively_regulates","term_name":"infection cushion formation","termid":"GO:0075183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of infection cushion formation","synonyms":[{"name":"negative regulation of infection cushion formation on or near host","type":"exact"}],"termid":"GO:0075186"}


id: PATO:0000738
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000738 enzyme function value (obsolete PATO:0000738)","termid":"PATO:0000738"}


id: PBO:0031046
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_anisomycin","termid":"PBO:0031046"}


id: SO:0000014
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence element characteristic of some RNA polymerase II promoters required for the correct positioning of the polymerase for the start of transcription. Overlaps the TSS. The mammalian consensus sequence is YYAN(T|A)YY; the Drosophila consensus sequence is TCA(G|T)t(T|C). In each the A is at position +1 with respect to the TSS. Functionally similar to the TATA box element.","definition_xrefs":["PMID:12651739","PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"},{"relation_name":"part_of","term_name":"RNApol_II_core_promoter","termid":"SO:0001669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INR_motif","synonyms":[{"name":"DMp2","type":"related"},{"name":"INR motif","type":"exact"},{"name":"initiator","type":"exact"},{"name":"initiator motif","type":"exact"}],"termid":"SO:0000014"}


id: FYPO:0005293
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another occurs to a lower extent than normal during a cellular response to methyl methanesulfonate. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000702","FYPO:0000652"],"is_obsolete":false,"name":"decreased protein-protein interaction during cellular response to methyl methanesulfonate","synonyms":[{"name":"decreased protein binding during cellular response to methyl methanesulfonate","type":"exact"},{"name":"decreased protein-protein interaction during cellular response to MMS","type":"exact"},{"name":"decreased protein-protein interaction in response to methyl methanesulfonate","type":"related"},{"name":"reduced protein-protein interaction during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0005293"}


id: GO:0140052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an oxidized lipoprotein particle stimulus.","definition_xrefs":["GOC:aruk","PMID:20037584","PMID:27607416","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to low-density lipoprotein particle stimulus","termid":"GO:0071404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to oxidised low-density lipoprotein particle stimulus","synonyms":[{"name":"cellular response to ox-LDL particle stimulus","type":"exact"},{"name":"cellular response to oxLDL particle stimulus","type":"exact"},{"name":"cellular response to oxidised LDL particle stimulus","type":"exact"},{"name":"cellular response to oxidized LDL particle stimulus","type":"exact"},{"name":"cellular response to oxidized low-density lipoprotein particle stimulus","type":"exact"}],"termid":"GO:0140052"}


id: GO:0034147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 5 signaling pathway.","definition_xrefs":["PMID:16551253","GOC:add","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"},{"relation_name":"regulates","term_name":"toll-like receptor 5 signaling pathway","termid":"GO:0034146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of toll-like receptor 5 signaling pathway","synonyms":[{"name":"regulation of TLR5 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 5 signalling pathway","type":"exact"}],"termid":"GO:0034147"}


id: GO:1902702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of hexose to propan-2-ol.","definition_xrefs":["GO_REF:0000093","GOC:TermGenie","GOC:mengo_curators","PMID:18727018","PMID:19539744"],"gene_count":0,"genotype_count":0,"name":"obsolete hexose catabolic process to propan-2-ol (obsolete GO:1902702)","synonyms":[{"name":"hexose breakdown to propan-2-ol","type":"exact"},{"name":"hexose catabolic process to isopropanol","type":"exact"},{"name":"hexose catabolic process to isopropyl alcohol","type":"exact"},{"name":"hexose catabolism to propan-2-ol","type":"exact"},{"name":"hexose degradation to propan-2-ol","type":"exact"},{"name":"solventogenesis","type":"related"}],"termid":"GO:1902702"}


id: PR:O59833
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC965.13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C965.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC965.13","synonyms":[{"name":"Spom972h-SPCC965.13","type":"exact"}],"termid":"PR:O59833"}


id: PBO:0051689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INMT-MINDY4 readthrough (NMD candidate)","termid":"PBO:0051689"}


id: PBO:0040450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 10D (putative)","termid":"PBO:0040450"}


id: PBO:0005201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein Mis16","termid":"PBO:0005201"}


id: MONDO:0017604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually indolent mature B-cell lymphoma, arising from the marginal zone of lymphoid tissues. It is characterized by the presence of small to medium sized atypical lymphocytes. It comprises three entities, according to the anatomic sites involved: extranodal marginal zone B-cell lymphoma of mucosa-associated lymphoid tissue, which affects extranodal sites (most often stomach, lung, skin, and ocular adnexa); nodal marginal zone B-cell lymphoma, which affects lymph nodes without evidence of extranodal disease; and splenic marginal zone B-cell lymphoma, which affects the spleen and splenic hilar lymph nodes, bone marrow, and often the peripheral blood.","definition_xrefs":["NCIT:C4341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indolent B-cell non-Hodgkin lymphoma","termid":"MONDO:0017594"},{"relation_name":"is_a","term_name":"spleen neoplasm","termid":"MONDO:0036696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"marginal zone lymphoma","secondary_identifiers":["Orphanet:300912","DOID:0050748","SCTID:447100004","UMLS:C1367654","ICDO:9699/3","GARD:13237","EFO:1000630","ONCOTREE:MZL","MEDGEN:277950"],"synonyms":[{"name":"MZBCL","type":"exact"},{"name":"MZL","type":"exact"},{"name":"lymphoma of marginal zone B cell","type":"exact"},{"name":"marginal zone B cell lymphoma","type":"exact"},{"name":"marginal zone B-cell lymphoma","type":"exact"},{"name":"marginal zone lymphoma","type":"exact"}],"termid":"MONDO:0017604","xrefs":{"Monarch":{"xref_id":"0017604"}}}


id: SO:0000979
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-protein_coding gene that encodes a guide_RNA.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non_protein_coding","termid":"SO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gRNA_encoding","synonyms":[{"name":"gRNA encoding","type":"exact"}],"termid":"SO:0000979"}


id: FYPO:0005122
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA transcribed from middle meiotic genes measured in a cell is lower than normal during the meiotic cell cycle. Middle meiotic genes are normally transcribed during meiotic nuclear division.","definition_xrefs":["PomBase:al","PMID:17927811","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during meiotic cell cycle","termid":"FYPO:0004630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased level of middle meiotic gene mRNA during meiotic cell cycle","synonyms":[{"name":"decreased level of middle meiosis gene mRNA during meiotic cell cycle","type":"exact"},{"name":"decreased level of middle meiotic gene RNA during meiotic cell cycle","type":"exact"},{"name":"decreased level of middle meiotic gene transcripts during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0005122"}


id: PBO:0075928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 20","termid":"PBO:0075928"}


id: PBO:0091300
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retention of intron IV leads to production of tandem hydrolase/cardiolipin fusion protein","termid":"PBO:0091300"}


id: FYPO:0001550
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell differs from normal during a cellular response to zinc ions. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered protein level during vegetative growth","termid":"FYPO:0001325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"altered protein level during cellular response to zinc ion","synonyms":[{"name":"abnormal protein level during cellular response to zinc ion","type":"exact"},{"name":"altered cellular protein level during cellular response to zinc ion during vegetative growth","type":"exact"},{"name":"altered protein level during cellular response to zinc","type":"exact"},{"name":"altered protein level during cellular response to zinc ion during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001550"}


id: GO:0045827
data:
  {"annotated_genes":["SJAG_02380","SJAG_01187"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117342,113225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving isoprenoid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isoprenoid metabolic process","termid":"GO:0019747"},{"relation_name":"is_a","term_name":"negative regulation of lipid metabolic process","termid":"GO:0045833"},{"relation_name":"negatively_regulates","term_name":"isoprenoid metabolic process","termid":"GO:0006720"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01187":null,"SJAG_02380":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of isoprenoid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of isoprenoid metabolic process","type":"exact"},{"name":"down-regulation of isoprenoid metabolic process","type":"exact"},{"name":"downregulation of isoprenoid metabolic process","type":"exact"},{"name":"inhibition of isoprenoid metabolic process","type":"narrow"},{"name":"negative regulation of isoprenoid metabolism","type":"exact"}],"termid":"GO:0045827","terms_by_termid":{"GO:2001211":null}}


id: PBO:0090759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-A chaperone, NASP family, Sim3","termid":"PBO:0090759"}


id: GO:0050743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-FMN linkage via 1'-(8alpha-FMN)-L-histidine.","definition_xrefs":["PMID:8611516","RESID:AA0352"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-FMN linkage via 1'-(8alpha-FMN)-L-histidine (obsolete GO:0050743)","termid":"GO:0050743"}


id: PBO:0039832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine and glutamate rich 1","termid":"PBO:0039832"}


id: MONDO:0002873
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete testicular germ cell tumor non-seminomatous (obsolete MONDO:0002873)","termid":"MONDO:0002873","xrefs":{"Monarch":{"xref_id":"0002873"}}}


id: PBO:0044501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteinyl leukotriene receptor 2","termid":"PBO:0044501"}


id: PATO:0000853
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000853 blinking reflex value (obsolete PATO:0000853)","termid":"PATO:0000853"}


id: SOFP:linked_to
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linked_to","termid":"SOFP:linked_to"}


id: MONDO:0019605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of very rare glomerular diseases, composed of immunotactoid glomerulopathy (ITG) and non-amyloid fibrillary glomerulopathy (non-amyloid FGP), that are characterized by mesangial deposition of monoclonal microtubular or polyclonal fibrillar deposits. Both present clinically with nephrotic range proteinuria, hematuria and renal insufficiency leading to renal failure in many cases. ITG is more likely to manifest with underlying lymphoproliferative disease, hypocomplementemia, dysproteinemia, monoclonal gammopathy or occult cryoglobulinemia. Non-amyloid FGP is 10 times more frequent than ITG.","definition_xrefs":["Orphanet:91137"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"glomerular disorder","termid":"MONDO:0019722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"immunotactoid or fibrillary glomerulopathy","secondary_identifiers":["UMLS:C5680195","GARD:12741","MEDGEN:1842578"],"synonyms":[{"name":"Immunotactoid or fibrillary glomerulonephritis","type":"exact"},{"name":"fibrillary glomerulonephritis and immunotactoid glomerulopathy","type":"related"}],"termid":"MONDO:0019605","xrefs":{"Monarch":{"xref_id":"0019605"}}}


id: MOD:00396
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydrogen atom on an oxygen with a carbohydrate-like group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O-glycosylated residue","synonyms":[{"name":"OGlycoRes","type":"exact"}],"termid":"MOD:00396"}


id: PR:Q9USS9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dni2 gene.","definition_xrefs":["UniProtKB:Q9USS9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delayed minus-nitrogen induction protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4.01","synonyms":[{"name":"Spom972h-dni2","type":"exact"}],"termid":"PR:Q9USS9"}


id: PBO:0051151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-30-5","termid":"PBO:0051151"}


id: MONDO:0013736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myopathy, centronuclear, 3 (obsolete MONDO:0013736)","termid":"MONDO:0013736","xrefs":{"Monarch":{"xref_id":"0013736"}}}


id: PBO:0047993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2 family member J, pseudogene","termid":"PBO:0047993"}


id: PBO:0080727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW and C2 domain containing 1","termid":"PBO:0080727"}


id: GO:0005814
data:
  {"annotated_genes":["SJAG_00719"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91458],"is_not":false,"summary":null,"term":"GO:0005814"}]},"cv_name":"cellular_component","definition":"A cellular organelle, found close to the nucleus in many eukaryotic cells, consisting of a small cylinder with microtubular walls, 300-500 nm long and 150-250 nm in diameter. It contains nine short, parallel, peripheral microtubular fibrils, each fibril consisting of one complete microtubule fused to two incomplete microtubules. Cells usually have two centrioles, lying at right angles to each other. At division, each pair of centrioles generates another pair and the twin pairs form the pole of the mitotic spindle.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"microtubule organizing center","termid":"GO:0005815"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00719":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"centriole","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao95019936","Wikipedia:Centriole"],"synonyms":[{"name":"daughter centriole","type":"narrow"},{"name":"mother centriole","type":"narrow"}],"termid":"GO:0005814","terms_by_termid":{"GO:0005814":null}}


id: PBO:0085261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peripheral protein of cytosolic face of mitochondrial outer membrane; required for mitochondrial fission; interacts with Fis1p and with the self-assembled oligomeric form of the dynamin-related GTPase Dnm1p; contains WD repeats; MDV1 has a paralog, CAF4, that arose from the whole genome duplication","termid":"PBO:0085261"}


id: PBO:0090728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Brix domain protein Rpf1","termid":"PBO:0090728"}


id: FYPO:0003328
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule organization phenotype observed in the vegetative growth phase of the life cycle in which the orientation of cytoplasmic microtubules within a cell is abnormal during interphase of the mitotic cell cycle. The normal orientation is parallel to the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal interphase microtubules","termid":"FYPO:0006101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0002399","FYPO:0000054"],"is_obsolete":false,"name":"misoriented interphase microtubules","synonyms":[{"name":"misoriented cytoplasmic microtubules during mitotic interphase","type":"exact"},{"name":"misoriented interphase cytoplasmic microtubules","type":"exact"},{"name":"misoriented interphase microtubules during mitotic cell cycle","type":"related"},{"name":"misoriented interphase microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0003328"}


id: GO:0086058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a voltage-gated channel across the plasma membrane of an Purkinje myocyte cell that contributes to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity involved in cardiac muscle cell action potential","termid":"GO:0086007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"voltage-gated calcium channel activity involved in Purkinje myocyte cell action potential","termid":"GO:0086058"}


id: MONDO:0015173
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autoimmune enteropathy type 2 (obsolete MONDO:0015173)","secondary_identifiers":["Orphanet:103916"],"termid":"MONDO:0015173","xrefs":{"Monarch":{"xref_id":"0015173"}}}


id: PBO:0075222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 1","termid":"PBO:0075222"}


id: MONDO:0700172
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lymphoma that occurs in a horse.","definition_xrefs":["NCIT:C134778"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma, non-human animal","termid":"MONDO:0700102"},{"relation_name":"is_a","term_name":"equine neoplasm","termid":"MONDO:0700170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"horse lymphoma","termid":"MONDO:0700172","xrefs":{"Monarch":{"xref_id":"0700172"}}}


id: GO:0160113
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The structure which joins the B10 protofilament of the B tubule to the A1 protofilament of the A tubule within an axonemal microtubule doublet.","definition_xrefs":["PMID:37295417","GOC:krc","PMID:29430673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axonemal doublet microtubule","termid":"GO:0097545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"axonemal microtubule doublet inner junction","termid":"GO:0160113"}


id: PR:Q9P383
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nuclear cap-binding protein subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR18847:SF0","OMA:SCHPO03690"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear cap-binding protein subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13A2.01c","secondary_identifiers":["UniProtKB:Q9P383"],"synonyms":[{"name":"20 kDa nuclear cap-binding protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CBP20 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NCBP 20 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NCBP2","type":"exact"}],"termid":"PR:Q9P383"}


id: PBO:0028637
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_DNA_double-strand_break_formation","termid":"PBO:0028637"}


id: GO:0010976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of neuron projection development. Neuron projection development is the process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites).","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron projection development","termid":"GO:0010975"},{"relation_name":"is_a","term_name":"positive regulation of cell projection organization","termid":"GO:0031346"},{"relation_name":"positively_regulates","term_name":"neuron projection development","termid":"GO:0031175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuron projection development","synonyms":[{"name":"positive regulation of neurite biosynthesis","type":"narrow"},{"name":"positive regulation of neurite development","type":"narrow"},{"name":"positive regulation of neurite formation","type":"narrow"},{"name":"positive regulation of neurite growth","type":"narrow"}],"termid":"GO:0010976"}


id: FYPO:0006461
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which histone H2A phosphorylation occurs to a greater extent than normal in telomeric regions during the first meiotic nuclear division. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PMID:19965387","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during meiosis I","termid":"FYPO:0003565"},{"relation_name":"is_a","term_name":"abnormal protein modification during meiotic cell cycle","termid":"FYPO:0006459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0001985","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H2A phosphorylation at telomere during meiosis I","synonyms":[{"name":"increased histone H2A phosphorylation at telomere during first meiotic nuclear division","type":"exact"},{"name":"increased telomeric histone H2A phosphorylation during meiosis I","type":"exact"}],"termid":"FYPO:0006461"}


id: PBO:0071379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 2","termid":"PBO:0071379"}


id: PBO:0056041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukotriene C4 synthase","termid":"PBO:0056041"}


id: PBO:0047796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXG1 antisense RNA 1","termid":"PBO:0047796"}


id: GO:0044385
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane. Occurring in a host cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete integral to membrane of host cell (obsolete GO:0044385)","termid":"GO:0044385"}


id: PBO:0070010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1307, pseudogene","termid":"PBO:0070010"}


id: SO:0000977
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_region","termid":"SO:0000833"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anchor_binding_site","synonyms":[{"name":"anchor binding site","type":"exact"}],"termid":"SO:0000977"}


id: MONDO:0012598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary gingival fibromatosis","termid":"MONDO:0016070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibromatosis, gingival, 4","secondary_identifiers":["MEDGEN:370209","UMLS:C1970245","MESH:C567028","OMIM:611010","GARD:2475"],"synonyms":[{"name":"GGF4","type":"related"},{"name":"GINGF4","type":"exact"},{"name":"HGF4","type":"related"},{"name":"fibromatosis gingival, hereditary, 4","type":"related"},{"name":"fibromatosis, gingival, 4","type":"exact"},{"name":"fibromatosis, gingival, hereditary, 4","type":"related"},{"name":"gingival fibromatosis, 4","type":"related"},{"name":"hereditary gingival fibromatosis, 4","type":"related"}],"termid":"MONDO:0012598","xrefs":{"Monarch":{"xref_id":"0012598"}}}


id: PBO:0064824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 3F","termid":"PBO:0064824"}


id: MONDO:0013094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"glioma susceptibility","termid":"MONDO:0100242"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glioma susceptibility 5","secondary_identifiers":["MEDGEN:414430","OMIM:613030","UMLS:C2751640"],"synonyms":[{"name":"GLM5","type":"exact"},{"name":"glioma susceptibility 5","type":"exact"}],"termid":"MONDO:0013094","xrefs":{"Monarch":{"xref_id":"0013094"}}}


id: PBO:0087689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Nup84 nuclear pore and SEACAT subcomplexes; involved in nucleocytoplasmic transport and NPC biogenesis in the nuclear pore subcomplex; subunit of SEACAT, a subcomplex of the SEA complex that inhibits the TORC1 inhibitory role of SEACIT (Iml1p-Npr2p-Npr3p), a GAP for Gtr1p in response to amino acid limitation, thereby resulting in activation of TORC1 signaling; SEA is a coatomer-related complex that associates dynamically with the vacuole; human SEH1 homolog","termid":"PBO:0087689"}


id: PBO:0078777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 3-1","termid":"PBO:0078777"}


id: MONDO:0100563
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of alpha thalessemia spectrum that is caused by an inherited multiallelic modification in an individual.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha thalassemia spectrum","termid":"MONDO:0011399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"digenic alpha thalassemia spectrum","termid":"MONDO:0100563","xrefs":{"Monarch":{"xref_id":"0100563"}}}


id: MONDO:0054846
data:
  {"annotated_genes":["SJAG_03042"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88184],"is_not":false,"summary":null,"term":"MONDO:0054846"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy, familial adult myoclonic","termid":"MONDO:0000160"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03042":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy, familial adult myoclonic, 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4748079","MEDGEN:1648448","OMIM:618074","DOID:0111696"],"synonyms":[{"name":"FAME6","type":"related"},{"name":"benign Adult Familial myoclonic epilepsy 6","type":"related"},{"name":"cortical myoclonic tremor with epilepsy, Familial, 6","type":"related"},{"name":"epilepsy, FAMILIAL ADULT myoclonic, 6","type":"related"}],"termid":"MONDO:0054846","terms_by_termid":{"MONDO:0054846":null},"xrefs":{"Monarch":{"xref_id":"0054846"}}}


id: MOD:00242
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(ADP-ribosyl)-L-serine.","definition_xrefs":["Unimod:213#S","PubMed:15842200","RESID:AA0237","PubMed:3141412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine diphosphoribosyl (ADP-ribosyl) modified residue","termid":"MOD:00752"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(ADP-ribosyl)-L-serine","synonyms":[{"name":"(S)-2-amino-3-([adenosine 5'-(trihydrogen diphosphate) 5'->5'-ester with alpha-D-ribofuranosyl]oxy)-propanoic acid","type":"exact"},{"name":"ADP Ribose addition","type":"related"},{"name":"ADP-Ribosyl","type":"related"},{"name":"MOD_RES ADP-ribosylserine","type":"exact"},{"name":"O-(ADP-ribosyl)-L-serine","type":"exact"},{"name":"O3-(ADP-ribosyl)-L-serine","type":"exact"},{"name":"O3-[alpha-D-ribofuranoside 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)]-L-serine","type":"exact"},{"name":"O3-alpha-D-ribofuranosyl-L-serine 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)","type":"exact"},{"name":"OADPRibSer","type":"exact"}],"termid":"MOD:00242"}


id: GO:0051501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving diterpene phytoalexins, a class of diterpene formed in plants in response to fungal infection, physical damage, chemical injury, or a pathogenic process; they are sometimes referred to as plant antibiotics. Diterpenes are unsaturated hydrocarbons containing 20 carbon atoms and 4 branched methyl groups and are made up of isoprenoid units.","definition_xrefs":["ISBN:0721662544","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid metabolic process","termid":"GO:0016101"},{"relation_name":"is_a","term_name":"phytoalexin metabolic process","termid":"GO:0052314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0019748"],"is_obsolete":false,"name":"diterpene phytoalexin metabolic process","synonyms":[{"name":"diterpene phytoalexin metabolism","type":"exact"}],"termid":"GO:0051501"}


id: PBO:0017531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic tryptophan-tRNA ligase Wrs1 (predicted)","termid":"PBO:0017531"}


id: GO:0062176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A DNA metabolic process that results in the disassembly of R-loops. R-loops are three-stranded nucleic acid structures consisitng of an RNA:DNA heteroduplex and a looped-out non-template strand. Aberrant formation and persistence of R-loops block transcription elongation and cause DNA damage. Mechanisms that resolve R-loops are essential for genome stability.","definition_xrefs":["PMID:27252122","PMID:28790157","PMID:33986538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin remodeling","termid":"GO:0006338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0008150"],"is_obsolete":false,"name":"R-loop processing","synonyms":[{"name":"R-loop disassembly","type":"exact"}],"termid":"GO:0062176"}


id: GO:0042568
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of two proteins, which in animals is 50kDa and consists of the insulin-like growth factor (IGF) and one of the insulin-like growth factor binding protein-1 (IGFBP-1), -2 (IGFBP-2), -4 (IGFBP-4) and -6 (IGFBP-6). The complex plays a role in growth and development.","definition_xrefs":["GOC:jl","PMID:12239079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insulin-like growth factor binding protein complex","termid":"GO:0016942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"insulin-like growth factor binary complex","synonyms":[{"name":"IGF binary complex","type":"exact"}],"termid":"GO:0042568"}


id: PBO:0044687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-aspartate oxidase","termid":"PBO:0044687"}


id: FYPO:0004154
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to heat","synonyms":[{"name":"normal protein phosphorylation during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to heat during vegetative growth","type":"exact"}],"termid":"FYPO:0004154"}


id: GO:0036020
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding an endolysosome. An endolysosome is a transient hybrid organelle formed by fusion of a late endosome with a lysosome.","definition_xrefs":["GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal membrane","termid":"GO:0005765"},{"relation_name":"is_a","term_name":"endosome membrane","termid":"GO:0010008"},{"relation_name":"part_of","term_name":"endolysosome","termid":"GO:0036019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005773","GO:0005575","GO:0005768","GO:0031410"],"is_obsolete":false,"name":"endolysosome membrane","synonyms":[{"name":"endolysosomal membrane","type":"exact"}],"termid":"GO:0036020"}


id: FYPO:0003733
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alcohol dehydrogenase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"abnormal alcohol dehydrogenase activity","synonyms":[{"name":"alcohol dehydrogenase (NAD) activity","type":"exact"}],"termid":"FYPO:0003733"}


id: PBO:0045322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dedicator of cytokinesis 2","termid":"PBO:0045322"}


id: PBO:0066691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of microtubule dynamics 2","termid":"PBO:0066691"}


id: MONDO:1011281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any achromatopsia that occurs in Rhesus monkey due to a mutation in the PDE6C gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"achromatopsia, non-human animal","termid":"MONDO:1012578"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"achromatopsia, PDE6C-related, Rhesus monkey","secondary_identifiers":["OMIA:002163-9544"],"synonyms":[{"name":"cone dystrophy 4, PDE6C-related, Rhesus monkey","type":"related"}],"termid":"MONDO:1011281","xrefs":{"Monarch":{"xref_id":"1011281"}}}


