# terms

id: GO:0033693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of neurofilaments into bundles, in which the filaments are longitudinally oriented, with numerous crossbridges between them. Neurofilament bundles may be cross-linked to each other, to membrane-bounded organelles or other cytoskeletal structures such as microtubules.","definition_xrefs":["PMID:11034913","PMID:11264295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate filament bundle assembly","termid":"GO:0045110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"neurofilament bundle assembly","synonyms":[{"name":"NF bundle assembly","type":"exact"}],"termid":"GO:0033693"}


id: GO:0002338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which B cells acquire the specialized features of B-1b B cells. B-1b B cells are B-1 cells that do not express CD5.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B-1 B cell differentiation","termid":"GO:0001923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B-1b B cell differentiation","synonyms":[{"name":"B-1b B cell development","type":"related"},{"name":"B-1b B lymphocyte differentiation","type":"exact"},{"name":"B-1b B-cell differentiation","type":"exact"},{"name":"B-1b B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002338"}


id: GO:0018486
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: methyl ethyl ketone + O2 = H2O + ethyl acetate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-butanone oxidase activity (obsolete GO:0018486)","termid":"GO:0018486"}


id: PBO:0028037
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_spindle_disassembly","termid":"PBO:0028037"}


id: PR:O59794
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl1702 gene.","definition_xrefs":["UniProtKB:O59794","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L17-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC364.03","synonyms":[{"name":"Spom972h-rpl1702","type":"exact"}],"termid":"PR:O59794"}


id: PATO:0001486
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An age quality that exists by virtue of the time (years and months) that the bearer has existed.","definition_xrefs":["WordNet:Wordnet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"age","termid":"PATO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronological age","termid":"PATO:0001486"}


id: FYPO:0000812
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which vacuole organization is abnormal. Vacuole organization results in the assembly, arrangement of constituent parts, or disassembly of a vacuole.","definition_xrefs":["GO:0007033","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"},{"relation_name":"is_a","term_name":"abnormal vacuole organization","termid":"FYPO:0002803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal vacuole organization during vegetative growth","synonyms":[{"name":"abnormal vacuolar organisation during vegetative growth","type":"exact"},{"name":"abnormal vacuolar organization during vegetative growth","type":"exact"},{"name":"abnormal vacuole organisation during vegetative growth","type":"exact"},{"name":"abnormal vacuole organization during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000812"}


id: PBO:0030141
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_GTP_binding","termid":"PBO:0030141"}


id: PBO:0084349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Large subunit of the dynactin complex; dynactin is involved in partitioning the mitotic spindle between mother and daughter cells; putative ortholog of mammalian p150(glued)","termid":"PBO:0084349"}


id: PBO:0045362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double PHD fingers 2","termid":"PBO:0045362"}


id: GO:0007141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle process comprising the steps by which a cell progresses through male meiosis I, the first meiotic division in the male germline.","definition_xrefs":["GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I","termid":"GO:0007127"},{"relation_name":"is_a","term_name":"male meiotic nuclear division","termid":"GO:0007140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0140013","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"male meiosis I","synonyms":[{"name":"male meiosis I nuclear division","type":"exact"}],"termid":"GO:0007141"}


id: PBO:0048591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltransferase light chain 5 pseudogene","termid":"PBO:0048591"}


id: PBO:0081883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 831","termid":"PBO:0081883"}


id: PBO:0012272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteiasome complex subunit alpha 1 (predicted)","termid":"PBO:0012272"}


id: GO:1902782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a decane stimulus.","definition_xrefs":["GO_REF:0000071","GOC:mengo_curators","PMID:23826995","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkane","termid":"GO:1902778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to decane","termid":"GO:1902782"}


id: GO:0031957
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a very long-chain fatty acid + ATP + CoA = a very long-chain fatty acyl-CoA + AMP + diphosphate. A very long-chain fatty acid has an aliphatic tail containing more than 22 carbons.","definition_xrefs":["PMID:18024425","RHEA:54536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid-CoA ligase activity","termid":"GO:0120515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"very long-chain fatty acid-CoA ligase activity","secondary_identifiers":["Reactome:R-HSA-5695957","Reactome:R-HSA-5696007","Reactome:R-HSA-9914143","Reactome:R-HSA-8875077"],"synonyms":[{"name":"very-long-chain fatty acid activation","type":"related"},{"name":"very-long-chain fatty acid-CoA ligase activity","type":"exact"},{"name":"very-long-chain-fatty-acid-CoA ligase activity","type":"exact"}],"termid":"GO:0031957"}


id: MONDO:0003966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A choriocarcinoma that arises from the testis and is characterized by the predominance of cytotrophoblastic and intermediate trophoblastic cells. Syncytiotrophoblastic cells are absent or not prominent.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choriocarcinoma of testis","termid":"MONDO:0003508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"testicular monophasic choriocarcinoma","secondary_identifiers":["DOID:6693","UMLS:C1515290","NCIT:C39935","MEDGEN:272841"],"termid":"MONDO:0003966","xrefs":{"Monarch":{"xref_id":"0003966"}}}


id: GO:0016114
data:
  {"annotated_genes":["SJAG_00624","SJAG_04865","SJAG_04307","SJAG_03352","SJAG_00580","SJAG_03360","SJAG_03715","SJAG_00413","SJAG_03349","SJAG_04568","SJAG_01474","SJAG_04499"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108360,81863,116764,96257,76044,101410,115606,103698,111327,90509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010142"},{"annotations":[101411,111328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033386"},{"annotations":[62587,67818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016104"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of terpenoids, any member of a class of compounds characterized by an isoprenoid chemical structure.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"},{"relation_name":"is_a","term_name":"isoprenoid biosynthetic process","termid":"GO:0008299"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00413":null,"SJAG_00580":null,"SJAG_00624":null,"SJAG_01474":null,"SJAG_03349":null,"SJAG_03352":null,"SJAG_03360":null,"SJAG_03715":null,"SJAG_04307":null,"SJAG_04499":null,"SJAG_04568":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"terpenoid biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Terpenoid"],"synonyms":[{"name":"terpenoid anabolism","type":"exact"},{"name":"terpenoid biosynthesis","type":"exact"},{"name":"terpenoid formation","type":"exact"},{"name":"terpenoid synthesis","type":"exact"}],"termid":"GO:0016114","terms_by_termid":{"GO:0010142":null,"GO:0016104":null,"GO:0033386":null}}


id: MONDO:0020296
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An abnormal, epithelial-lined connection between an artery and vein that is present at the time of birth.","definition_xrefs":["NCIT:C35377"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital anomaly of cardiovascular system","termid":"MONDO:0024239"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital arteriovenous fistula","secondary_identifiers":["UMLS:C0332965","MedDRA:10003226","MESH:D001164","GARD:19560","MEDGEN:137676","SCTID:234148007","Orphanet:98731"],"synonyms":[{"name":"congenital arteriovenous shunt","type":"exact"}],"termid":"MONDO:0020296","xrefs":{"Monarch":{"xref_id":"0020296"}}}


id: GO:0019152
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetoin + NAD+ = diacetyl + NADH + H+. This reaction is catalyzed in the reverse direction.","definition_xrefs":["MetaCyc:ACETOINDEHYDROG-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acetoin dehydrogenase (NAD+) activity","secondary_identifiers":["KEGG_REACTION:R02343"],"synonyms":[{"name":"diacetyl reductase activity","type":"exact"}],"termid":"GO:0019152"}


id: PBO:0048401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GAS6 antisense RNA 1","termid":"PBO:0048401"}


id: MONDO:0009190
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epiphyseal dysplasia of femoral head, myopia, and deafness","secondary_identifiers":["MEDGEN:346470","MESH:C565585","OMIM:226950","UMLS:C1856918"],"synonyms":[{"name":"epiphyseal dysplasia of femoral head, myopia, and deafness","type":"exact"}],"termid":"MONDO:0009190","xrefs":{"Monarch":{"xref_id":"0009190"}}}


id: MOD:00843
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes atoms of particular common isotopes with atoms of or groups containing (15)N.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope labeled residue","termid":"MOD:00702"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(15)N labeled residue","termid":"MOD:00843"}


id: PBO:0071474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 15","termid":"PBO:0071474"}


id: PBO:0087817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIID subunit (150 kDa); involved in RNA polymerase II transcription initiation","termid":"PBO:0087817"}


id: GO:1904189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transformation of host cell by virus.","definition_xrefs":["PMID:12200142","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of transformation of host cell by virus","termid":"GO:1904187"},{"relation_name":"positively_regulates","term_name":"symbiont-mediated transformation of host cell","termid":"GO:0019087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of transformation of host cell by virus","synonyms":[{"name":"activation of transformation of host cell by virus","type":"narrow"},{"name":"activation of viral transformation","type":"narrow"},{"name":"activation of viral transformation of host cell","type":"narrow"},{"name":"positive regulation of viral transformation","type":"exact"},{"name":"positive regulation of viral transformation of host cell","type":"exact"},{"name":"up regulation of transformation of host cell by virus","type":"exact"},{"name":"up regulation of viral transformation","type":"exact"},{"name":"up regulation of viral transformation of host cell","type":"exact"},{"name":"up-regulation of transformation of host cell by virus","type":"exact"},{"name":"up-regulation of viral transformation","type":"exact"},{"name":"up-regulation of viral transformation of host cell","type":"exact"},{"name":"upregulation of transformation of host cell by virus","type":"exact"},{"name":"upregulation of viral transformation","type":"exact"},{"name":"upregulation of viral transformation of host cell","type":"exact"}],"termid":"GO:1904189"}


id: PBO:0081906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 863, pseudogene","termid":"PBO:0081906"}


id: GO:0019593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mannitol, the alditol derived from D-mannose by reduction of the aldehyde group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexitol biosynthetic process","termid":"GO:0019406"},{"relation_name":"is_a","term_name":"mannitol metabolic process","termid":"GO:0019594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"mannitol biosynthetic process","secondary_identifiers":["MetaCyc:PWY-3881"],"synonyms":[{"name":"mannitol anabolism","type":"exact"},{"name":"mannitol biosynthesis","type":"exact"},{"name":"mannitol formation","type":"exact"},{"name":"mannitol synthesis","type":"exact"}],"termid":"GO:0019593"}


id: PBO:0058764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6888","termid":"PBO:0058764"}


id: GO:0051434
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a BH3 protein domain, present in Bcl-2 family members. The BH3 domain is a potent death domain and has an important role in protein-protein interactions and in cell death.","definition_xrefs":["PMID:9020082","PMID:12133724","PMID:11048732","PMID:9704409","Prosite:PS01259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"BH domain binding","termid":"GO:0051400"},{"relation_name":"is_a","term_name":"death domain binding","termid":"GO:0070513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"BH3 domain binding","termid":"GO:0051434"}


id: GO:0003042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is triggered by carotid body-vasomotor excitation and results in a decrease in the diameter of an artery during the chemoreceptor response to decreased blood pressure.","definition_xrefs":["ISBN:0323031951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasoconstriction of artery involved in chemoreceptor response to lowering of systemic arterial blood pressure","termid":"GO:0002012"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by carotid body chemoreceptor signaling","termid":"GO:0003027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vasoconstriction of artery involved in carotid body chemoreceptor response to lowering of systemic arterial blood pressure","synonyms":[{"name":"vasoconstriction of artery during carotid body chemoreceptor response to lowering of systemic arterial blood pressure","type":"related"}],"termid":"GO:0003042"}


id: GO:1900872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pentadec-1-ene.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene metabolic process","termid":"GO:0043449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pentadec-1-ene metabolic process","synonyms":[{"name":"pentadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900872"}


id: PBO:0069966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1261, pseudogene","termid":"PBO:0069966"}


id: GO:0009344
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex that possesses nitrite reductase [NAD(P)H] activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"nitrite reductase complex [NAD(P)H]","termid":"GO:0009344"}


id: FYPO:0002082
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of ubiquitination of one or more specific proteins, or of specific protein sites, is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein ubiquitination during vegetative growth","termid":"FYPO:0000905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"increased protein ubiquitination during vegetative growth","synonyms":[{"name":"increased protein ubiquitination during mitotic cell cycle","type":"related"},{"name":"increased protein ubiquitinylation during vegetative growth","type":"exact"},{"name":"increased protein ubiquitylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002082"}


id: PBO:0073541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing ring finger 3","termid":"PBO:0073541"}


id: GO:0080079
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-cellobiose + H2O = 2 D-glucose.","definition_xrefs":["RHEA:30679","PMID:15604686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"cellobiose glucosidase activity","secondary_identifiers":["MetaCyc:RXN-10773"],"synonyms":[{"name":"D-cellobiose glucosidase activity","type":"exact"},{"name":"cellobiose glucohydrolase activity","type":"exact"}],"termid":"GO:0080079"}


id: PBO:0017452
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mereotopologically_related_to","termid":"PBO:0017452"}


id: PR:Q9P6Q3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial chaperone BCS1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01124","PANTHER:PTHR23070:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial chaperone bcs1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.07","secondary_identifiers":["UniProtKB:Q9P6Q3"],"synonyms":[{"name":"BCS1-like protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-BCS1L","type":"exact"}],"termid":"PR:Q9P6Q3"}


id: PBO:0076103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 8","termid":"PBO:0076103"}


id: MONDO:0009770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any 3MC syndrome in which the cause of the disease is a mutation in the MASP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3MC syndrome","termid":"MONDO:0017398"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3MC syndrome 1","secondary_identifiers":["MEDGEN:167100","OMIM:257920","DOID:0060575","Orphanet:2506","GARD:4049","UMLS:C0796059","EFO:1001978"],"synonyms":[{"name":"3MC syndrome 1","type":"exact"},{"name":"3MC syndrome caused by mutation in MASP1","type":"exact"},{"name":"3MC syndrome type 1","type":"exact"},{"name":"3MC1","type":"related"},{"name":"3Mc syndrome type 1","type":"exact"},{"name":"MASP1 3MC syndrome","type":"exact"},{"name":"Michels syndrome","type":"related"},{"name":"Michels syndrome, formerly","type":"related"},{"name":"craniosynostosis with 51D anomalies","type":"related"},{"name":"oculopalatoskeletal syndrome","type":"related"}],"termid":"MONDO:0009770","xrefs":{"Monarch":{"xref_id":"0009770"}}}


id: FYPO:0007124
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone during prophase is normal (i.e. indistinguishable from wild type). The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["GO:1990023","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to mitotic spindle midzone","termid":"FYPO:0004692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to mitotic spindle midzone during prophase","synonyms":[{"name":"normal protein localisation to mitotic spindle midzone during prophase","type":"exact"},{"name":"normal protein localization to mitotic spindle midzone during prophase during vegetative growth","type":"exact"},{"name":"normal protein localization to spindle midzone during prophase during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0007124"}


id: PBO:0038527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 1","termid":"PBO:0038527"}


id: PBO:0069580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 854, pseudogene","termid":"PBO:0069580"}


id: GO:0010123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The anaerobic chemical reactions and pathways resulting in the breakdown of acetate to form butyrate, ethanol, acetone and butanol.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete acetate catabolic process to butyrate, ethanol, acetone and butanol (obsolete GO:0010123)","synonyms":[{"name":"acetate fermentation to butyrate, ethanol, acetone and butanol","type":"exact"}],"termid":"GO:0010123"}


id: GO:0070743
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is composed of an interleukin-23 alpha (p19, product of the IL23A gene) and an interleukin-12 beta (p40, product of the IL12B gene) subunit and is secreted into the extracellular space.","definition_xrefs":["PMID:15999093","PMID:11114383","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005576","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"interleukin-23 complex","synonyms":[{"name":"IL-23 complex","type":"exact"},{"name":"IL12B","type":"narrow"},{"name":"IL23A","type":"narrow"},{"name":"p19","type":"narrow"},{"name":"p40","type":"narrow"}],"termid":"GO:0070743"}


id: PBO:0086673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by fungal homology comparisons and RT-PCR; partially overlaps RND5-5; YLR159C-A has a paralog, YLR156C-A, that arose from a segmental duplication","termid":"PBO:0086673"}


id: GO:0033776
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADPH + O2 + phenylacetone = benzyl acetate + H2O + NADP+.","definition_xrefs":["EC:1.14.13.92","RHEA:10124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"phenylacetone monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R07201","MetaCyc:1.14.13.92-RXN"],"synonyms":[{"name":"PAMO","type":"related"},{"name":"phenylacetone,NADPH:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0033776"}


id: GO:1900683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fumonisin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"fumonisin biosynthetic process","termid":"GO:1900541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of fumonisin biosynthetic process","synonyms":[{"name":"regulation of fumonisin anabolism","type":"exact"},{"name":"regulation of fumonisin biosynthesis","type":"exact"},{"name":"regulation of fumonisin formation","type":"exact"},{"name":"regulation of fumonisin synthesis","type":"exact"}],"termid":"GO:1900683"}


id: GO:0051595
data:
  {"annotated_genes":["SJAG_01596","SJAG_04726","SJAG_02960","SJAG_04674","SJAG_02106","SJAG_02988","SJAG_04404"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61740,74579,104616,76209],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019243"},{"annotations":[61490,106879,59690],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061727"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methylglyoxal stimulus. Methylglyoxal is a 2-oxoaldehyde derived from propanal.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01596":null,"SJAG_02106":null,"SJAG_02960":null,"SJAG_02988":null,"SJAG_04404":null,"SJAG_04674":null,"SJAG_04726":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to methylglyoxal","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"response to pyruvaldehyde","type":"exact"}],"termid":"GO:0051595","terms_by_termid":{"GO:0019243":null,"GO:0061727":null}}


id: PBO:0054383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1779","termid":"PBO:0054383"}


id: PBO:0075278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 19 pseudogene 3","termid":"PBO:0075278"}


id: PBO:0039331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachidonate lipoxygenase 3 pseudogene 1","termid":"PBO:0039331"}


id: PBO:0071571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 37","termid":"PBO:0071571"}


id: PBO:0074438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 39","termid":"PBO:0074438"}


id: PBO:0029988
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_glycosylation","termid":"PBO:0029988"}


id: GO:0047113
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a quinone + an aldehyde + H2O = a carboxylate + a quinol + H+.","definition_xrefs":["RHEA:13881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"aldehyde dehydrogenase (quinone) activity","secondary_identifiers":["EC:1.2.5.2","MetaCyc:1.2.99.3-RXN"],"synonyms":[{"name":"aldehyde dehydrogenase (acceptor) activity","type":"related"},{"name":"aldehyde dehydrogenase (pyrroloquinoline-quinone)","type":"related"},{"name":"aldehyde:(pyrroloquinoline-quinone) oxidoreductase activity","type":"related"}],"termid":"GO:0047113"}


id: PBO:0045727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 6 pseudogene 4","termid":"PBO:0045727"}


id: GO:0043600
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multi-component enzymatic machine at the cytoplasmic replication fork, which mediates DNA replication. Includes DNA primase, DNA polymerase, DNA helicase, and other proteins.","definition_xrefs":["GOC:jl","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replisome","termid":"GO:0030894"},{"relation_name":"part_of","term_name":"cytoplasmic replication fork","termid":"GO:0043597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"cytoplasmic replisome","synonyms":[{"name":"prokaryotic replisome","type":"exact"}],"termid":"GO:0043600"}


id: MONDO:0008091
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete abnormal neutrophil chemotactic response (obsolete MONDO:0008091)","secondary_identifiers":["OMIM:162820"],"synonyms":[{"name":"NM","type":"broad"},{"name":"neutrophil chemotactic response","type":"related"},{"name":"neutrophil migration","type":"related"}],"termid":"MONDO:0008091","xrefs":{"Monarch":{"xref_id":"0008091"}}}


id: GO:0060910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of initiation of plasmid DNA replication that contributes to copy number maintenance.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-templated DNA replication initiation","termid":"GO:0032297"},{"relation_name":"is_a","term_name":"regulation of DNA replication initiation involved in plasmid copy number maintenance","termid":"GO:0060909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006260"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006260"],"is_obsolete":false,"name":"negative regulation of DNA replication initiation involved in plasmid copy number maintenance","termid":"GO:0060910"}


id: GO:1904163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of triglyceride homeostasis.","definition_xrefs":["GOC:TermGenie","PMID:22541436","GO_REF:0000058","GOC:BHF","GOC:rph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of triglyceride homeostasis (obsolete GO:1904163)","synonyms":[{"name":"regulation of triacylglycerol homeostasis","type":"exact"}],"termid":"GO:1904163"}


id: MOD:01386
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-valine residue to 3-hydroxy-L-valine.","definition_xrefs":["PubMed:7328054","RESID:AA0463","ChEBI:141793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxylated residue","termid":"MOD:00677"},{"relation_name":"is_a","term_name":"modified L-valine residue","termid":"MOD:00920"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxy-L-valine","synonyms":[{"name":"(2S)-2-amino-3-hydroxy-3-methylbutanoic acid","type":"exact"},{"name":"3-hydroxy-L-valine","type":"exact"},{"name":"3-hydroxyvaline","type":"exact"},{"name":"3HyVal","type":"exact"},{"name":"MOD_RES 3-hydroxyvaline","type":"exact"}],"termid":"MOD:01386"}


id: GO:0005163
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a nerve growth factor receptor.","definition_xrefs":["GOC:ai","PMID:15654015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"death receptor binding","termid":"GO:0005123"},{"relation_name":"is_a","term_name":"neurotrophin receptor binding","termid":"GO:0005165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"nerve growth factor receptor binding","synonyms":[{"name":"NGF receptor binding","type":"exact"},{"name":"nerve growth factor receptor ligand","type":"narrow"},{"name":"neurotrophin","type":"narrow"}],"termid":"GO:0005163"}


id: PR:O43043
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- scp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol regulatory element-binding protein cleavage-activating protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.15c","synonyms":[{"name":"SCAP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SREBP cleavage-activating protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-scp1","type":"exact"}],"termid":"PR:O43043"}


id: GO:0045648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of erythrocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myeloid cell differentiation","termid":"GO:0045639"},{"relation_name":"is_a","term_name":"regulation of erythrocyte differentiation","termid":"GO:0045646"},{"relation_name":"positively_regulates","term_name":"erythrocyte differentiation","termid":"GO:0030218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of erythrocyte differentiation","synonyms":[{"name":"activation of erythrocyte differentiation","type":"narrow"},{"name":"positive regulation of RBC differentiation","type":"exact"},{"name":"positive regulation of red blood cell differentiation","type":"exact"},{"name":"stimulation of erythrocyte differentiation","type":"narrow"},{"name":"up regulation of erythrocyte differentiation","type":"exact"},{"name":"up-regulation of erythrocyte differentiation","type":"exact"},{"name":"upregulation of erythrocyte differentiation","type":"exact"}],"termid":"GO:0045648"}


id: GO:0102547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R)-2-O-(alpha-D-glucopyranosyl)-glycerate + H2O = (R)-glycerate + D-glucose.","definition_xrefs":["RHEA:32059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether hydrolase activity","termid":"GO:0016803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"glucosylglycerate hydrolase activity","secondary_identifiers":["MetaCyc:RXN-14901","EC:3.2.1.208"],"termid":"GO:0102547"}


id: GO:0006423
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling cysteine to cysteinyl-tRNA, catalyzed by cysteinyl-tRNA synthetase. A cysteinyl-tRNA synthetase is a class-I synthetase. The activated amino acid is transferred to the 2'-OH group of a cysteine-accetping tRNA. The 2'-O-aminoacyl-tRNA will ultimately migrate to the 3' position via transesterification.","definition_xrefs":["ISBN:0716730510","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006520","GO:0006399"],"is_obsolete":false,"name":"cysteinyl-tRNA aminoacylation","termid":"GO:0006423"}


id: PBO:0055165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2585","termid":"PBO:0055165"}


id: PBO:0026699
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_arabinose_carbon_source","termid":"PBO:0026699"}


id: PBO:0060102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 3","termid":"PBO:0060102"}


id: MONDO:0800180
data:
  {"annotated_genes":["SJAG_04944"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030048"},{"annotations":[87652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007369"}]},"cv_name":"mondo","definition":"Any inherited porphyria in which the cause of the disease is monoallelic or biallelic variants in the CPOX gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited porphyria","termid":"MONDO:0019142"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04944":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019142"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0019142","MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"CPOX-related hereditary coproporphyria","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0800180","terms_by_termid":{"MONDO:0007369":null,"MONDO:0030048":null},"xrefs":{"Monarch":{"xref_id":"0800180"}}}


id: GO:0140764
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A translational repressor activity that binds to a single-stranded small regulatory RNA (either a miRNA or a siRNA) to guide it to its target mRNA.","definition_xrefs":["PMID:27184117","PMID:34117606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation repressor activity","termid":"GO:0030371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0045182"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0045182"],"is_obsolete":false,"name":"small RNA binding translational repressor activity","termid":"GO:0140764"}


id: GO:0090179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors signal via downstream effectors that modulates the establishment of planar polarity contributing to neural tube closure.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete planar cell polarity pathway involved in neural tube closure (obsolete GO:0090179)","termid":"GO:0090179"}


id: PBO:0082593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Citrate synthase, peroxisomal isozyme involved in glyoxylate cycle; catalyzes condensation of acetyl coenzyme A and oxaloacetate to form citrate; expression is controlled by Rtg1p and Rtg2p transcription factors; SCF-Ucc1 regulates level of Cit2p to maintain citrate homeostasis; oxaloacetate-dependent positive feedback loop inhibits Cit2p ubiquitination; CIT2 has a paralog, CIT1, that arose from the whole genome duplication","termid":"PBO:0082593"}


id: PBO:0040970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 41","termid":"PBO:0040970"}


id: PBO:0005020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III complex subunit Rpc37 (predicted)","termid":"PBO:0005020"}


id: PBO:0016048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EKC/KEOPS protein complex associated ATPase (predicted)","termid":"PBO:0016048"}


id: PBO:0001544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome assembly protein Rsa3 (predicted)","termid":"PBO:0001544"}


id: PBO:0082200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-1,2-mannosidase; involved in ER-associated protein degradation (ERAD); catalyzes the removal of one mannose residue from a glycosylated protein, converting the modification from Man9GlcNAc to Man8GlcNAc; catalyzes the last step in glycoprotein maturation in the ER and is critical for ER protein degradation","termid":"PBO:0082200"}


id: PBO:0051728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 1","termid":"PBO:0051728"}


id: PBO:0044643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DC-STAMP domain containing 1","termid":"PBO:0044643"}


id: GO:0030941
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a chloroplast targeting sequence, a specific peptide sequence that acts as a signal to localize the protein within the chloroplast.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal sequence binding","termid":"GO:0005048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005048"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005048","GO:0003674"],"is_obsolete":false,"name":"chloroplast targeting sequence binding","termid":"GO:0030941"}


id: PBO:0026686
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_proline_level","termid":"PBO:0026686"}


id: GO:0106439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: L-lysine(out) + L-arginine(in) = L-lysine(in) + L-arginine(out).","definition_xrefs":["RHEA:70827","PMID:10903140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lysine transmembrane transporter activity","termid":"GO:0015189"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"L-arginine transmembrane transporter activity","termid":"GO:0061459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"L-lysine:L-arginine antiporter activity","termid":"GO:0106439"}


id: MONDO:1012204
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"osteodystrophy, non-human animal","termid":"MONDO:1011951"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteodystrophy, cattle","secondary_identifiers":["OMIA:000753-9913"],"termid":"MONDO:1012204","xrefs":{"Monarch":{"xref_id":"1012204"}}}


id: PBO:0075504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated serine rich 2","termid":"PBO:0075504"}


id: MOD:01711
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with one of the Applied Biosystems iTRAQ4plex reagent reporter+balance groups.","definition_xrefs":["Unimod:214#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent alpha-amino acylated residue","termid":"MOD:01708"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent N-acylated residue","termid":"MOD:01709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01711"}


id: GO:1904236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of substrate-dependent cell migration, cell attachment to substrate.","definition_xrefs":["GOC:TermGenie","PMID:25834989","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-substrate adhesion","termid":"GO:0010812"},{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"regulation of substrate-dependent cell migration, cell attachment to substrate","termid":"GO:1904235"},{"relation_name":"negatively_regulates","term_name":"substrate-dependent cell migration, cell attachment to substrate","termid":"GO:0006931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of substrate-dependent cell migration, cell attachment to substrate","synonyms":[{"name":"down regulation of substrate-bound cell migration, cell attachment to substrate","type":"exact"},{"name":"down regulation of substrate-dependent cell migration, cell attachment to substrate","type":"exact"},{"name":"down-regulation of substrate-bound cell migration, cell attachment to substrate","type":"exact"},{"name":"down-regulation of substrate-dependent cell migration, cell attachment to substrate","type":"exact"},{"name":"downregulation of substrate-bound cell migration, cell attachment to substrate","type":"exact"},{"name":"downregulation of substrate-dependent cell migration, cell attachment to substrate","type":"exact"},{"name":"inhibition of substrate-bound cell migration, cell attachment to substrate","type":"narrow"},{"name":"inhibition of substrate-dependent cell migration, cell attachment to substrate","type":"narrow"},{"name":"negative regulation of substrate-bound cell migration, cell attachment to substrate","type":"exact"}],"termid":"GO:1904236"}


id: PBO:0075213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntrophin gamma 1","termid":"PBO:0075213"}


id: SO:0001738
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of the H4 histone whereby multiple lysines are acylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_acylation_region","termid":"SO:0001737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H4K_acylation_region","synonyms":[{"name":"H4K acylation region","type":"exact"},{"name":"H4KAc","type":"related"}],"termid":"SO:0001738"}


id: GO:0047351
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 GTP + H+ = P(1),P(4)-bis(5'-guanosyl) tetraphosphate + diphosphate + H+.","definition_xrefs":["RHEA:18153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016779","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"GTP guanylyltransferase activity","secondary_identifiers":["KEGG_REACTION:R00012","EC:2.7.7.45","MetaCyc:2.7.7.45-RXN"],"synonyms":[{"name":"GTP:GTP guanylyltransferase activity","type":"broad"},{"name":"guanosine-triphosphate guanylyltransferase activity","type":"exact"}],"termid":"GO:0047351"}


id: GO:0045138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the adult male tail tip is generated and organized. In some species of rhabitid nematodes, the male tail tip undergoes a morphological change such that the most posterior hypodermal cells in the tail (hyp8-11 in C. elegans) fuse and retract anteriorly, changing the shape of the tail from a pointed, tapered cone, or spike, to a rounded, blunt dome.","definition_xrefs":["PMID:18050419","PMID:21408209","GOC:kmv","PMID:7409314","PMID:16806150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male anatomical structure morphogenesis","termid":"GO:0090598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nematode male tail tip morphogenesis","synonyms":[{"name":"male tail morphogenesis","type":"broad"},{"name":"male tail tip morphogenesis","type":"related"},{"name":"tail tip morphogenesis","type":"related"}],"termid":"GO:0045138"}


id: PBO:0081622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 551","termid":"PBO:0081622"}


id: PBO:0085684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in proteolytic activation of Rim101p; part of response to alkaline pH; PalA/AIP1/Alix family member; interaction with the ESCRT-III subunit Snf7p suggests a relationship between pH response and multivesicular body formation","termid":"PBO:0085684"}


id: GO:0046521
data:
  {"annotated_genes":["SJAG_00519","SJAG_01219"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91648,110662],"is_not":false,"summary":null,"term":"GO:0046521"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sphingoids, any of a class of compounds comprising sphinganine and its homologues and stereoisomers, and derivatives of these compounds.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid catabolic process","termid":"GO:0030149"},{"relation_name":"is_a","term_name":"sphingoid metabolic process","termid":"GO:0046519"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00519":null,"SJAG_01219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sphingoid catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"sphingoid breakdown","type":"exact"},{"name":"sphingoid catabolism","type":"exact"},{"name":"sphingoid degradation","type":"exact"}],"termid":"GO:0046521","terms_by_termid":{"GO:0046521":null}}


id: PBO:0046121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E nuclear import factor 1","termid":"PBO:0046121"}


id: PBO:0064203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"placenta associated 9 pseudogene 1","termid":"PBO:0064203"}


id: GO:0043059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the speed, mechanical force, or rhythm of the anterior movement of an organism.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of locomotion","termid":"GO:0040012"},{"relation_name":"regulates","term_name":"forward locomotion","termid":"GO:0043056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of forward locomotion","termid":"GO:0043059"}


id: GO:0060134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a startle magnitude is reduced when the startling stimulus is preceded by a low-intensity prepulse.","definition_xrefs":["GOC:dph","PMID:10341260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"part_of","term_name":"startle response","termid":"GO:0001964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prepulse inhibition","secondary_identifiers":["Wikipedia:Prepulse_inhibition"],"synonyms":[{"name":"PPI","type":"related"},{"name":"pre-pulse inhibition","type":"exact"}],"termid":"GO:0060134"}


id: PBO:0073029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secernin 2","termid":"PBO:0073029"}


id: PBO:0061290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal PAS domain protein 2","termid":"PBO:0061290"}


id: PBO:0055636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3075","termid":"PBO:0055636"}


id: PBO:0031720
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitochondrial_genome_maintenance","termid":"PBO:0031720"}


id: PBO:0064745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 81","termid":"PBO:0064745"}


id: PBO:0066688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"relaxin 3","termid":"PBO:0066688"}


id: MONDO:0859342
data:
  {"annotated_genes":["SJAG_01082","SJAG_04699"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87389,87390],"is_not":false,"summary":null,"term":"MONDO:0859342"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01082":null,"SJAG_04699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly 30, primary, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620183","UMLS:C5774280","MEDGEN:1824053"],"termid":"MONDO:0859342","terms_by_termid":{"MONDO:0859342":null},"xrefs":{"Monarch":{"xref_id":"0859342"}}}


id: GO:0046077
data:
  {"annotated_genes":["SJAG_04657"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dUDP, deoxyuridine (5'-)diphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside diphosphate metabolic process","termid":"GO:0009196"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide metabolic process","termid":"GO:0009219"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04657":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"dUDP metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"dUDP metabolism","type":"exact"}],"termid":"GO:0046077","terms_by_termid":{"GO:0006227":null}}


id: MONDO:0001490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A stromal corneal dystrophy that is caused by mutation(s) in the TGFBI gene.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial-stromal TGFBI dystrophy","termid":"MONDO:0000764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal granular dystrophy","secondary_identifiers":["SCTID:45283008","UMLS:C0018179","DOID:12318","NCIT:C34651","ICD10CM:H18.53","ICD9:371.53","MEDGEN:42290"],"synonyms":[{"name":"granular corneal dystrophy","type":"exact"}],"termid":"MONDO:0001490","xrefs":{"Monarch":{"xref_id":"0001490"}}}


id: GO:0004374
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + carbon dioxide (CO2), followed by S-aminomethyldihydrolipoylprotein + (6S)-tetrahydrofolate = dihydrolipoylprotein + (6R)-5,10-methylenetetrahydrofolate + ammonia. Made up of two components, aminomethyltransferase and glycine dehydrogenase (decarboxylating).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete glycine cleavage system (obsolete GO:0004374)","synonyms":[{"name":"glycine cleavage system","type":"exact"},{"name":"glycine synthase","type":"broad"}],"termid":"GO:0004374"}


id: GO:0060958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of an endocardial cell over time, from its formation to the mature cell. An endocardial cell is a specialized endothelial cell that makes up the endocardium portion of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial cell development","termid":"GO:0001885"},{"relation_name":"is_a","term_name":"cardiac cell development","termid":"GO:0055006"},{"relation_name":"part_of","term_name":"endocardial cell differentiation","termid":"GO:0060956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cell development","termid":"GO:0060958"}


id: MONDO:0014523
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"hereditary ataxia","termid":"MONDO:0100309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"juvenile-onset diabetes mellitus-central and peripheral neurodegeneration syndrome","secondary_identifiers":["UMLS:C4015436","MEDGEN:863873","OMIM:616192","Orphanet:445062","GARD:17768"],"synonyms":[{"name":"ACPHD","type":"related"},{"name":"ataxia, combined cerebellar and peripheral, with hearing loss and diabetes mellitus","type":"related"},{"name":"combined cerebellar and peripheral ataxia-hearing loss-diabetes mellitus syndrome","type":"exact"}],"termid":"MONDO:0014523","xrefs":{"Monarch":{"xref_id":"0014523"}}}


id: MONDO:1011311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Digestive system disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"digestive system disorder, non-human animal","termid":"MONDO:1011311","xrefs":{"Monarch":{"xref_id":"1011311"}}}


id: GO:1903847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aorta morphogenesis.","definition_xrefs":["GOC:TermGenie","GOC:rph","GOC:BHF","GOC:BHF_miRNA","GO_REF:0000058","PMID:22269326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of artery morphogenesis","termid":"GO:1905651"},{"relation_name":"regulates","term_name":"aorta morphogenesis","termid":"GO:0035909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of aorta morphogenesis","termid":"GO:1903847"}


id: PBO:0071797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P RNA component H1","termid":"PBO:0071797"}


id: GO:0004143
data:
  {"annotated_genes":["SJAG_04883","SJAG_02429"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67820,99477],"is_not":false,"summary":null,"term":"GO:0004143"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1,2-diacyl-sn-glycerol + ATP = a 1,2-diacyl-sn-glycero-3-phosphate + ADP + H+.","definition_xrefs":["GOC:elh","RHEA:10272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid kinase activity","termid":"GO:0001727"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02429":null,"SJAG_04883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"ATP-dependent diacylglycerol kinase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:2.7.1.107","MetaCyc:DIACYLGLYKIN-RXN","Reactome:R-HSA-426240"],"synonyms":[{"name":"DGK activity","type":"related"},{"name":"diacylglycerol kinase activity","type":"broad"},{"name":"diacylglycerol kinase activity (ATP)","type":"exact"},{"name":"diglyceride kinase activity","type":"broad"}],"termid":"GO:0004143","terms_by_termid":{"GO:0004143":null}}


id: GO:0015016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenylyl sulfate + alpha-D-glucosaminyl-[heparan sulfate](n) = adenosine 3',5'-bisphosphate + 2 H+ + N-sulfo-alpha-D-glucosaminyl-[heparan sulfate](n).","definition_xrefs":["RHEA:21980","EC:2.8.2.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heparan sulfate sulfotransferase activity","termid":"GO:0034483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016782","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"heparan sulfate N-sulfotransferase activity","secondary_identifiers":["Reactome:R-HSA-2022860","GO:0004393","MetaCyc:HEPARITIN-SULFOTRANSFERASE-RXN","GO:0015022","GO:0051910"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:N-desulfoheparin N-sulfotransferase activity","type":"related"},{"name":"3'-phosphoadenylyl-sulfate:[heparan sulfate]-glucosamine N-sulfotransferase activity","type":"related"},{"name":"3'-phosphoadenylyl-sulfate:heparitin N-sulfotransferase activity","type":"related"},{"name":"3'-phosphoadenylylsulfate:N-desulfoheparin sulfotransferase activity","type":"related"},{"name":"N-HSST activity","type":"related"},{"name":"N-desulfoheparin sulfotransferase activity","type":"related"},{"name":"N-heparan sulfate sulfotransferase activity","type":"related"},{"name":"PAPS:DSH sulfotransferase activity","type":"related"},{"name":"PAPS:N-desulfoheparin sulfotransferase activity","type":"related"},{"name":"[heparan sulfate]-glucosamine N-sulfotransferase activity","type":"exact"},{"name":"[heparan sulphate]-glucosamine N-sulphotransferase activity","type":"exact"},{"name":"desulfoheparin sulfotransferase activity","type":"exact"},{"name":"glucosaminyl N-deacetylase/N-sulfotransferase activity","type":"related"},{"name":"heparan sulfate 2-N-sulfotransferase activity","type":"related"},{"name":"heparan sulfate N-deacetylase/N-sulfotransferase activity","type":"related"},{"name":"heparin N-deacetylase/N-sulfotransferase activity","type":"related"},{"name":"heparin N-deacetylase/N-sulphotransferase activity","type":"related"},{"name":"heparin N-sulfotransferase activity","type":"related"},{"name":"heparin-glucosamine N-sulfotransferase activity","type":"exact"},{"name":"heparitin N-sulfotransferase activity","type":"exact"},{"name":"heparitin N-sulphotransferase activity","type":"exact"},{"name":"heparitin sulfotransferase activity","type":"exact"}],"termid":"GO:0015016"}


id: PBO:0081543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 460","termid":"PBO:0081543"}


id: GO:0050528
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-(acyloxy)acyl group of bacterial toxin = 3-hydroxyacyl group of bacterial toxin + a fatty acid.","definition_xrefs":["MetaCyc:3.1.1.77-RXN","EC:3.1.1.77"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"acyloxyacyl hydrolase activity","secondary_identifiers":["RHEA:12032"],"termid":"GO:0050528"}


id: GO:0071925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of thymic stromal lymphopoietin (TSLP) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah","PMID:17129180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"thymic stromal lymphopoietin production","synonyms":[{"name":"TSLP production","type":"exact"}],"termid":"GO:0071925"}


id: PBO:0068495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 79, pseudogene","termid":"PBO:0068495"}


id: PBO:0073453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SFT2 domain containing 2","termid":"PBO:0073453"}


id: MONDO:0009611
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"3-methylglutaconic aciduria (3-MGA) type IV, or unclassified 3-MGA, is a clinically heterogeneous disorder characterized by increased 3-methylglutaconic acid excretion in individuals that cannot be classified as having one of the other forms of 3-MGA (3-MGA I, II or III).","definition_xrefs":["Orphanet:67048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-methylglutaconic aciduria","termid":"MONDO:0017359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"3-methylglutaconic aciduria type 4","secondary_identifiers":["GARD:10342","UMLS:C1855126","MESH:C565393","DOID:0110006","MEDGEN:344425","OMIM:250951","SCTID:297233004","icd11.foundation:185382411"],"synonyms":[{"name":"3 alpha methylglutaconic aciduria type IV","type":"related"},{"name":"3 methylglutaconic aciduria type IV","type":"related"},{"name":"3-METHYLGLUTACONIC aciduria, type IV","type":"related"},{"name":"3-Methylglutaconic aciduria, type 4","type":"related"},{"name":"3-methylglutaconic aciduria type IV","type":"exact"},{"name":"MGA type IV","type":"exact"},{"name":"MGA4","type":"exact"},{"name":"MGCA4","type":"exact"},{"name":"Mga, type 4","type":"related"},{"name":"Not otherwise specified 3-MGA-Uria type","type":"related"}],"termid":"MONDO:0009611","xrefs":{"Monarch":{"xref_id":"0009611"}}}


id: PBO:0064972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 28, pseudogene","termid":"PBO:0064972"}


id: GO:0042771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a cell. The pathway is induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage, and ends when the execution phase of apoptosis is triggered.","definition_xrefs":["GOC:mtg_apoptosis","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intrinsic apoptotic signaling pathway in response to DNA damage","termid":"GO:0008630"},{"relation_name":"is_a","term_name":"intrinsic apoptotic signaling pathway by p53 class mediator","termid":"GO:0072332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","synonyms":[{"name":"DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"}],"termid":"GO:0042771"}


id: GO:0044387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stopping, prevention, or reduction in frequency, rate or extent of protein kinase activity as a result of regulating the phosphorylation status of that protein kinase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein kinase activity","termid":"GO:0006469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein kinase activity by regulation of protein phosphorylation","termid":"GO:0044387"}


id: GO:0008292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of acetylcholine, the acetic acid ester of the organic base choline.","definition_xrefs":["ISBN:0192800752","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylcholine metabolic process","termid":"GO:0008291"},{"relation_name":"is_a","term_name":"acetate ester biosynthetic process","termid":"GO:1900620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acetylcholine biosynthetic process","synonyms":[{"name":"acetylcholine anabolism","type":"exact"},{"name":"acetylcholine biosynthesis","type":"exact"},{"name":"acetylcholine formation","type":"exact"},{"name":"acetylcholine synthesis","type":"exact"}],"termid":"GO:0008292"}


id: FYPO:0001772
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a tRNA methyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal tRNA methyltransferase activity","termid":"FYPO:0001771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"decreased tRNA methyltransferase activity","synonyms":[{"name":"reduced tRNA methyltransferase activity","type":"exact"}],"termid":"FYPO:0001772"}


id: MONDO:0017249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pulmonary airway malformation","termid":"MONDO:0016580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital pulmonary airway malformation type 1","secondary_identifiers":["Orphanet:280832","UMLS:C5437763","icd11.foundation:1455719613","GARD:21094","MEDGEN:1760964"],"synonyms":[{"name":"CCAM type 1","type":"exact"},{"name":"CPAM type 1","type":"exact"},{"name":"congenital cystic adenomatoid malformation of the lung type 1","type":"exact"},{"name":"congenital cystic adenomatous malformation of the lung type 1","type":"exact"},{"name":"congenital cystic disease of the lung type 1","type":"exact"}],"termid":"MONDO:0017249","xrefs":{"Monarch":{"xref_id":"0017249"}}}


id: PR:O14018
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine--tRNA ligase, cytoplasmic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11778:SF0","PRO:DNx","OMA:SCHPO02129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine--tRNA ligase, cytoplasmic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.15","secondary_identifiers":["UniProtKB:O14018"],"synonyms":[{"name":"SerRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SARS","type":"exact"},{"name":"seryl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"seryl-tRNA(Ser/Sec) synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14018"}


id: MONDO:0001538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A ischemic disease that involves the retina.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ischemic disease","termid":"MONDO:0005053"},{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"},{"relation_name":"is_a","term_name":"neurovascular disorder","termid":"MONDO:0043218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinal ischemia","secondary_identifiers":["ICD10CM:H35.82","ICD9:362.84","UMLS:C0162291","DOID:12510","SCTID:26468004","MEDGEN:102372"],"synonyms":[{"name":"ischaemic disease of retina","type":"exact"},{"name":"ischemic disease of retina","type":"exact"},{"name":"retina ischaemic disease","type":"exact"},{"name":"retina ischemic disease","type":"exact"}],"termid":"MONDO:0001538","xrefs":{"Monarch":{"xref_id":"0001538"}}}


id: GO:0036524
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of a sugar or dicarbonyl from a glycated L-arginine, L-lysine or L-cysteine residue within proteins that have been attacked and modified by glyoxal or 2-oxopropanal.","definition_xrefs":["EC:3.5.1.124","PMID:26873906","GOC:PARL","GOC:bf","PMID:14568004","PMID:25416785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0140096","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"protein deglycase activity","synonyms":[{"name":"glyoxylase III","type":"exact"},{"name":"protein deglycating enzyme","type":"related"}],"termid":"GO:0036524"}


id: GO:0140990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process involved in converting precursor piRNAs into non-overlapping, contiguous primary piRNAs (approximately 24-30-nt piRNAs with a preference for a 5' uridine (U) via the endonucleolytic activity of cytosolic PIWI. This may include pre-piRNA maturation of 3' ends by trimming and 2'-O-methylation.","definition_xrefs":["PMID:26166577","PMID:34469728","PMID:22907665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"piRNA processing","termid":"GO:0034587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"primary piRNA processing","termid":"GO:0140990"}


id: PBO:0002657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation diffusion family zinc membrane transporter Cis4","termid":"PBO:0002657"}


id: MONDO:0007914
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lumbar stenosis, familial","secondary_identifiers":["MEDGEN:372016","MESH:C563613","UMLS:C1835320","OMIM:152550"],"synonyms":[{"name":"lumbar stenosis, familial","type":"exact"}],"termid":"MONDO:0007914","xrefs":{"Monarch":{"xref_id":"0007914"}}}


id: MONDO:0021547
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypocalcified amelogenesis imperfecta","termid":"MONDO:0968955"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta type 3B","secondary_identifiers":["MEDGEN:1621302","GARD:18258","DOID:0080243","UMLS:C4539891","OMIM:617607"],"synonyms":[{"name":"AI3B","type":"exact"},{"name":"amelogenesis imperfecta, type 3B","type":"exact"},{"name":"amelogenesis imperfecta, type IIIB","type":"exact"}],"termid":"MONDO:0021547","xrefs":{"Monarch":{"xref_id":"0021547"}}}


id: SO:0001691
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A restriction enzyme recognition site that, when cleaved, results in no overhangs.","definition_xrefs":["SBOL:jgquinn","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"restriction_enzyme_recognition_site","termid":"SO:0001687"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blunt_end_restriction_enzyme_cleavage_site","synonyms":[{"name":"blunt end restriction enzyme cleavage site","type":"exact"}],"termid":"SO:0001691"}


id: GO:0015389
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: (pyrimidine nucleoside or adenosine)(out) + Na+(out) = (pyrimidine nucleoside or adenosine)(in) + Na+(in).","definition_xrefs":["TC:2.A.41.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase transmembrane transporter activity","termid":"GO:0005345"},{"relation_name":"is_a","term_name":"pyrimidine nucleobase transmembrane transporter activity","termid":"GO:0005350"},{"relation_name":"is_a","term_name":"nucleoside:sodium symporter activity","termid":"GO:0005415"},{"relation_name":"is_a","term_name":"nucleobase:monoatomic cation symporter activity","termid":"GO:0015391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"pyrimidine- and adenosine-specific:sodium symporter activity","synonyms":[{"name":"pyrimidine- and adenine-specific:sodium symporter activity","type":"related"}],"termid":"GO:0015389"}


id: GO:0032976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which enzymes, such as aspartate aminotransferase, are enabled to move from the mitochondrial matrix into the cytosol, as part of the apoptotic process.","definition_xrefs":["PMID:9843949","GOC:mah","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic mitochondrial changes","termid":"GO:0008637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007005","GO:0008150"],"is_obsolete":false,"name":"release of matrix enzymes from mitochondria","synonyms":[{"name":"mAST release from mitochondria","type":"narrow"},{"name":"release of aspartate aminotransferase from mitochondria","type":"narrow"}],"termid":"GO:0032976"}


id: MONDO:0020497
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Turcot syndrome with polyposis or Turcot syndrome type 2 is a form of familial adematous polyposis, characterized by the concurrence of thousands of colonic adenomatous polyposis or colorectal cancer (CRC) and a primary central nervous system tumor (principally medulloblastoma). It is also associated with pigmented ocular fundus lesions.","definition_xrefs":["Orphanet:99818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic familial adenomatous polyposis","termid":"MONDO:0021055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Turcot syndrome with polyposis","secondary_identifiers":["icd11.foundation:813602368","MEDGEN:1826134","NCIT:C40464","GARD:16912","UMLS:C5681818"],"termid":"MONDO:0020497","xrefs":{"Monarch":{"xref_id":"0020497"}}}


id: PBO:0028100
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_alcohol_dehydrogenase_activity","termid":"PBO:0028100"}


id: MONDO:0020320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute myeloid leukemia (AML) characterized by blasts with evidence of maturation to more mature neutrophils. (WHO, 2001)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bilineal acute myeloid leukemia","termid":"MONDO:0011118"},{"relation_name":"is_a","term_name":"acute myeloid leukemia by FAB classification","termid":"MONDO:0015667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"acute myeloblastic leukemia with maturation","secondary_identifiers":["ONCOTREE:AM","UMLS:C1879321","MEDGEN:361829","DOID:0081087","ICDO:9874/3","GARD:527","NANDO:2200006","Orphanet:98834","EFO:0003028","NCIT:C3250"],"synonyms":[{"name":"AM","type":"related"},{"name":"AML M2","type":"exact"},{"name":"AML with maturation","type":"exact"},{"name":"FAB M2","type":"exact"},{"name":"LAM M2","type":"related"},{"name":"M2 acute granulocytic leukaemia","type":"exact"},{"name":"M2 acute granulocytic leukemia","type":"exact"},{"name":"M2 acute myeloblastic leukaemia","type":"exact"},{"name":"M2 acute myeloblastic leukaemia with maturation","type":"exact"},{"name":"M2 acute myeloblastic leukemia","type":"exact"},{"name":"M2 acute myeloblastic leukemia with maturation","type":"exact"},{"name":"M2 acute myelocytic leukaemia with maturation","type":"exact"},{"name":"M2 acute myelocytic leukemia with maturation","type":"exact"},{"name":"M2 acute myelogenous leukaemia","type":"exact"},{"name":"M2 acute myelogenous leukaemia with maturation","type":"exact"},{"name":"M2 acute myelogenous leukemia","type":"exact"},{"name":"M2 acute myelogenous leukemia with maturation","type":"exact"},{"name":"M2 acute myeloid leukaemia","type":"exact"},{"name":"M2 acute myeloid leukaemia with maturation","type":"exact"},{"name":"M2 acute myeloid leukemia","type":"exact"},{"name":"M2 acute myeloid leukemia with maturation","type":"exact"},{"name":"acute M2 myeloid leukaemia","type":"exact"},{"name":"acute M2 myeloid leukemia","type":"exact"},{"name":"acute myeloblastic leukaemia M2","type":"exact"},{"name":"acute myeloblastic leukaemia type 2","type":"related"},{"name":"acute myeloblastic leukemia M2","type":"exact"},{"name":"acute myeloblastic leukemia type 2","type":"related"},{"name":"acute myelocytic leukaemia with maturation","type":"exact"},{"name":"acute myelocytic leukemia with maturation","type":"exact"},{"name":"acute myelogenous leukaemia with maturation","type":"exact"},{"name":"acute myelogenous leukemia with maturation","type":"exact"},{"name":"acute myeloid leukaemia (AML-M2)","type":"exact"},{"name":"acute myeloid leukaemia with maturation","type":"exact"},{"name":"acute myeloid leukemia (AML-M2)","type":"exact"},{"name":"acute myeloid leukemia with maturation","type":"exact"}],"termid":"MONDO:0020320","xrefs":{"Monarch":{"xref_id":"0020320"}}}


id: FYPO:0005429
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which UV-damage excision repair occurs to a lower extent than normal during G2 phase of the mitotic cell cycle. UV-damage excision repair is a DNA repair process that is initiated by an endonuclease that introduces a single-strand incision immediately 5' of a UV-induced damage site, and that acts on both cyclobutane pyrimidine dimers (CPDs) and pyrimidine-pyrimidone 6-4 photoproducts (6-4PPs).","definition_xrefs":["GO:0070914","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased UV-damage excision repair","termid":"FYPO:0004031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000293","FYPO:0000298"],"is_obsolete":false,"name":"decreased UV-damage excision repair during mitotic G2 phase","synonyms":[{"name":"decreased UV-damage excision repair during G2 phase of mitotic cell cycle","type":"related"},{"name":"decreased UV-damage excision repair during mitotic G2 during vegetative growth","type":"exact"},{"name":"reduced UV-damage excision repair during mitotic G2 phase","type":"exact"}],"termid":"FYPO:0005429"}


id: GO:0019586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving galacturonate, the anion of galacturonic acid, the uronic acid formally derived from galactose by oxidation of the hydroxymethylene group at C-6 to a carboxyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uronic acid metabolic process","termid":"GO:0006063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"galacturonate metabolic process","synonyms":[{"name":"galacturonate metabolism","type":"exact"}],"termid":"GO:0019586"}


id: GO:1901466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ferulate catabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"ferulate catabolic process","termid":"GO:1901067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of ferulate catabolic process","synonyms":[{"name":"regulation of ferulate breakdown","type":"exact"},{"name":"regulation of ferulate catabolism","type":"exact"},{"name":"regulation of ferulate degradation","type":"exact"}],"termid":"GO:1901466"}


id: MONDO:0012114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, Beasley-Cohen type","secondary_identifiers":["UMLS:C1837462","GARD:10102","OMIM:608763","MEDGEN:332459","MESH:C536199"],"synonyms":[{"name":"Ehlers-Danlos syndrome with intellectual disability, deafness, and cataract","type":"related"},{"name":"Ehlers-Danlos syndrome with mental retardation, deafness, and cataract","type":"related"},{"name":"Ehlers-Danlos syndrome, Beasley-Cohen type","type":"exact"}],"termid":"MONDO:0012114","xrefs":{"Monarch":{"xref_id":"0012114"}}}


id: SO:0001515
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A quality of an insertion where the insert is in a cytologically inverted orientation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insertion_attribute","termid":"SO:0001512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inverted","termid":"SO:0001515"}


id: GO:1900968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sarcinapterin metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"is_a","term_name":"regulation of pteridine metabolic process","termid":"GO:0042068"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"sarcinapterin metabolic process","termid":"GO:1900867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of sarcinapterin metabolic process","synonyms":[{"name":"regulation of sarcinapterin metabolism","type":"exact"}],"termid":"GO:1900968"}


id: GO:1901927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cadinene.","definition_xrefs":["PMID:22867794","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene catabolic process","termid":"GO:0051763"},{"relation_name":"is_a","term_name":"cadinene metabolic process","termid":"GO:1901926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"cadinene catabolic process","synonyms":[{"name":"cadinene breakdown","type":"exact"},{"name":"cadinene catabolism","type":"exact"},{"name":"cadinene degradation","type":"exact"}],"termid":"GO:1901927"}


id: FYPO:0003599
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which formation of the mature 3' end of an snRNA molecule is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0034472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA processing","termid":"FYPO:0001980"},{"relation_name":"is_a","term_name":"normal RNA metabolic process","termid":"FYPO:0004850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal snRNA 3'-end processing","synonyms":[{"name":"normal snRNA 3'-end processing during mitotic cell cycle","type":"related"},{"name":"normal snRNA 3'-end processing during vegetative growth","type":"exact"}],"termid":"FYPO:0003599"}


id: GO:0001975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amphetamine stimulus. Amphetamines consist of a group of compounds related to alpha-methylphenethylamine.","definition_xrefs":["GOC:dph","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amine","termid":"GO:0014075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to amphetamine","termid":"GO:0001975"}


id: GO:0001952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of attachment of a cell to the extracellular matrix.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-substrate adhesion","termid":"GO:0010810"},{"relation_name":"regulates","term_name":"cell-matrix adhesion","termid":"GO:0007160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of cell-matrix adhesion","termid":"GO:0001952"}


id: GO:0010657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle a muscle cell and result in its death. A muscle cell is a mature contractile cell, commonly known as a myocyte, that forms one of three kinds of muscle.","definition_xrefs":["GOC:dph","CL:0000187","GOC:tb","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle cell apoptotic process","synonyms":[{"name":"muscle cell apoptosis","type":"narrow"}],"termid":"GO:0010657"}


id: PBO:0069235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 490, pseudogene","termid":"PBO:0069235"}


id: PBO:0079846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-45 myosin chaperone A","termid":"PBO:0079846"}


id: PBO:0036370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, flocculin Pfl9, DIPSY family","termid":"PBO:0036370"}


id: FYPO:0002744
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more amino acid transport RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Amino acid transport RNAs are transcribed from genes whose products are involved in amino acid transport.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of transport gene mRNA during vegetative growth","termid":"FYPO:0004490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased level of amino acid transport gene mRNA during vegetative growth","synonyms":[{"name":"increased amino acid transport gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of amino acid transport gene RNA during vegetative growth","type":"exact"},{"name":"increased level of amino acid transport gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of amino acid transport gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0002744"}


id: PBO:0114420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AIF family member 3","termid":"PBO:0114420"}


id: GO:0017169
data:
  {"annotated_genes":["SJAG_00168","SJAG_00999","SJAG_01233","SJAG_04319"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008444"},{"annotations":[78415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003881"},{"annotations":[68748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003882"},{"annotations":[94873],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004142"},{"annotations":[94874],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004307"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP + alcohol = CMP + phosphatidyl alcohol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00168":null,"SJAG_00999":null,"SJAG_01233":null,"SJAG_04319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016780"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016780","GO:0003674"],"is_obsolete":false,"name":"CDP-alcohol phosphatidyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0017169","terms_by_termid":{"GO:0003881":null,"GO:0003882":null,"GO:0004142":null,"GO:0004307":null,"GO:0008444":null}}


id: MONDO:0018468
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Proton-pump inhibitor-responsive esophageal eosinophilia (PPI-REE) is a rare, gastroenterologic disease characterized by typical clinical, endoscopic and histological features of eosinophilic oesophagitis (i.e. symptomatic oesophageal dysfunction associated with eosinophil-predominant mucose infiltrate) which completely remits upon proton pump inhibitor therapy.","definition_xrefs":["Orphanet:411696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eosinophilic gastrointestinal disease","termid":"MONDO:0018438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"proton-pump inhibitor-responsive esophageal eosinophilia","secondary_identifiers":["GARD:21735","MEDGEN:1669432","UMLS:C4749332"],"synonyms":[{"name":"PPI-REE","type":"exact"},{"name":"PPI-responsive esophageal eosinophilia","type":"exact"},{"name":"PPIRee","type":"exact"}],"termid":"MONDO:0018468","xrefs":{"Monarch":{"xref_id":"0018468"}}}


id: PBO:0031036
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_lipid_particle_organization","termid":"PBO:0031036"}


id: GO:0044636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the regulation of complement activation via the classical pathway of the bitten/stung organism.","definition_xrefs":["PMID:20837040","GOC:fj","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in modulation of complement activation, classical pathway in another organism (obsolete GO:0044636)","synonyms":[{"name":"envenomation resulting in modulation of complement activation, classical pathway in other organism","type":"exact"}],"termid":"GO:0044636"}


id: PBO:0090735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase cascade scaffold protein Ahk1","termid":"PBO:0090735"}


id: GO:1900745
data:
  {"annotated_genes":["SJAG_00318","SJAG_03903","SJAG_02135","SJAG_03828","SJAG_00027","SJAG_01199","SJAG_02183","SJAG_06622","SJAG_02945","SJAG_06621","SJAG_06592","SJAG_01587"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97074,110780,110781,110782,110783,110784,110785,110786,113672,114336,119235,120158],"is_not":false,"summary":null,"term":"GO:1900745"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of p38MAPK cascade.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of MAPK cascade","termid":"GO:0043410"},{"relation_name":"is_a","term_name":"regulation of p38MAPK cascade","termid":"GO:1900744"},{"relation_name":"positively_regulates","term_name":"p38MAPK cascade","termid":"GO:0038066"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00318":null,"SJAG_01199":null,"SJAG_01587":null,"SJAG_02135":null,"SJAG_02183":null,"SJAG_02945":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_06592":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of p38MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of p38 MAPK cascade","type":"exact"},{"name":"activation of p38 cascade","type":"exact"},{"name":"activation of p38MAPK cascade","type":"narrow"},{"name":"positive regulation of osmosensory signaling MAPK cascade","type":"narrow"},{"name":"positive regulation of p38 MAPK cascade","type":"exact"},{"name":"positive regulation of p38 cascade","type":"exact"},{"name":"up regulation of p38 MAPK cascade","type":"exact"},{"name":"up regulation of p38 cascade","type":"exact"},{"name":"up regulation of p38MAPK cascade","type":"exact"},{"name":"up-regulation of p38 MAPK cascade","type":"exact"},{"name":"up-regulation of p38 cascade","type":"exact"},{"name":"up-regulation of p38MAPK cascade","type":"exact"},{"name":"upregulation of p38 MAPK cascade","type":"exact"},{"name":"upregulation of p38 cascade","type":"exact"},{"name":"upregulation of p38MAPK cascade","type":"exact"}],"termid":"GO:1900745","terms_by_termid":{"GO:1900745":null}}


id: MONDO:0014539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any focal segmental glomerulosclerosis in which the cause of the disease is a mutation in the CRB2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited focal segmental glomerulosclerosis","termid":"MONDO:0005363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"focal segmental glomerulosclerosis 9","secondary_identifiers":["UMLS:C4015555","DOID:0111134","GARD:16070","MEDGEN:863992","OMIM:616220"],"synonyms":[{"name":"CRB2 focal segmental glomerulosclerosis","type":"exact"},{"name":"FSGS9","type":"exact"},{"name":"focal segmental glomerulosclerosis 9","type":"exact"},{"name":"focal segmental glomerulosclerosis caused by mutation in CRB2","type":"exact"},{"name":"focal segmental glomerulosclerosis type 9","type":"exact"},{"name":"glomerulosclerosis, focal segmental, 9","type":"related"}],"termid":"MONDO:0014539","xrefs":{"Monarch":{"xref_id":"0014539"}}}


id: GO:0005688
data:
  {"annotated_genes":["SJAG_03214","SJAG_02469","SJAG_01327","SJAG_01819","SJAG_03460","SJAG_05240","SJAG_03954","SJAG_03070"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[62963,63523,72513,73449,79313,80636,80643,81725],"is_not":false,"summary":null,"term":"GO:0005688"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains small nuclear RNA U6, the Lsm2-8 heptameric ring complex, as well as several proteins that are unique to the U6 snRNP, most of which remain associated with the U6 snRNA both while the U6 snRNP is free or assembled into the U4/U6 snRNP or into a series of spliceosomal complexes.","definition_xrefs":["GOC:mah","GOC:krc","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01327":null,"SJAG_01819":null,"SJAG_02469":null,"SJAG_03070":null,"SJAG_03214":null,"SJAG_03460":null,"SJAG_03954":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"U6 snRNP","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000117":null},"synonyms":[{"name":"snRNP U6","type":"exact"}],"termid":"GO:0005688","terms_by_termid":{"GO:0005688":null}}


id: GO:0039542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the rate or extent of K63-linked ubiquitination of RIG-I (also known as DDX58), thereby suppressing RIG-I signal transduction. Lys63-linked ubiquitination of the N-terminal CARD domains of RIG-I is crucial for the cytosolic RIG-I signaling pathway to elicit host antiviral innate immunity.","definition_xrefs":["PMID:21890623","PMID:19454348"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host RIG-I K63-linked ubiquitination (obsolete GO:0039542)","synonyms":[{"name":"inhibition by virus of TRIM25-mediated ubiquitination of host RIG-I","type":"exact"},{"name":"inhibition by virus of host DDX58 K63-linked ubiquitination","type":"exact"},{"name":"inhibition by virus of host RIG-I activity by inhibition of RIG-I ubiquitination","type":"broad"}],"termid":"GO:0039542"}


id: PBO:0071024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 26","termid":"PBO:0071024"}


id: PBO:0054086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1438","termid":"PBO:0054086"}


id: PBO:0075138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPA1 divergent transcript","termid":"PBO:0075138"}


id: PBO:0064588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member H","termid":"PBO:0064588"}


id: FYPO:0006564
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which cells show increased sensitivity to ethanol when the cell population is in stationary phase. Cells stop growing (and may die) at a concentration of ethanol that allows wild type cells to grow.","definition_xrefs":["PomBase:mah","PMID:9372444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical in stationary phase","termid":"FYPO:0008000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0002683","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to ethanol in stationary phase","synonyms":[{"name":"decreased cell population growth during cellular response to ethanol in stationary phase","type":"exact"},{"name":"decreased growth during cellular response to ethanol in stationary phase","type":"exact"},{"name":"hypersensitive to ethanol in stationary phase","type":"exact"},{"name":"sensitive to ethanol during stationary phase","type":"exact"},{"name":"sensitive to ethyl alcohol in stationary phase","type":"exact"}],"termid":"FYPO:0006564"}


id: PBO:0029900
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_mononucleate_vegetative_cell_with_mislocalized_nucleus","termid":"PBO:0029900"}


id: MONDO:0002215
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete atypical teratoid rhabdoid tumor (obsolete MONDO:0002215)","termid":"MONDO:0002215","xrefs":{"Monarch":{"xref_id":"0002215"}}}


id: GO:0110100
data:
  {"annotated_genes":["SJAG_04745","SJAG_00773","SJAG_00794"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140456"},{"annotations":[79559,77558,97127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000073"}]},"cv_name":"biological_process","definition":"The release of duplicated spindle pole bodies (SPBs) and their migration away from each other within the nuclear membrane. Duplicated SPBs are connected by a bridge structure that is severed in order to release the SPBs from one another. Following liberation, SPBs diffuse through the nuclear membrane until they are across from each other. SPB separation must take place in order for a bipolar spindle to assemble.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"spindle pole body organization","termid":"GO:0051300"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00773":null,"SJAG_00794":null,"SJAG_04745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0007010","GO:0000226"],"is_obsolete":false,"name":"spindle pole body separation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0110100","terms_by_termid":{"GO:0000073":null,"GO:0140456":null}}


id: PBO:0076650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 5","termid":"PBO:0076650"}


id: PBO:0011444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA (pseudouridine) methyltransferase Mra1","termid":"PBO:0011444"}


id: PBO:0058721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6849","termid":"PBO:0058721"}


id: GO:0050546
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (4-hydroxyphenyl)pyruvate + H+ = (4-hydroxyphenyl)acetaldehyde + CO2.","definition_xrefs":["EC:4.1.1.80","RHEA:18697"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"4-hydroxyphenylpyruvate decarboxylase activity","secondary_identifiers":["MetaCyc:4.1.1.80-RXN","KEGG_REACTION:R03341"],"synonyms":[{"name":"4-hydroxyphenylpyruvate carboxy-lyase (4-hydroxyphenylacetaldehyde-forming)","type":"related"},{"name":"4-hydroxyphenylpyruvate carboxy-lyase activity","type":"related"}],"termid":"GO:0050546"}


id: PBO:0090527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prp19 complex subunit, RNA-binding Cwf5","termid":"PBO:0090527"}


id: PBO:0079511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin reductase 2","termid":"PBO:0079511"}


id: PBO:0042126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 200","termid":"PBO:0042126"}


id: PBO:0029133
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spindle_pole_body_absent_from_cell_after_meiosis_II","termid":"PBO:0029133"}


id: MONDO:0005710
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Coexistence of Hodgkin and non-Hodgkin lymphoma in the same anatomic site.","definition_xrefs":["NCIT:C38661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"composite lymphoma","secondary_identifiers":["ICDO:9596/3","UMLS:C0545080","Orphanet:168966","MEDGEN:107468","MESH:D058617","GARD:20109","DOID:5820"],"synonyms":[{"name":"composite Hodgkin and non-Hodgkin lymphoma","type":"exact"},{"name":"composite lymphoma","type":"exact"}],"termid":"MONDO:0005710","xrefs":{"Monarch":{"xref_id":"0005710"}}}


id: PBO:0017425
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-proper_part_of","termid":"PBO:0017425"}


id: GO:0031505
data:
  {"annotated_genes":["SJAG_00218","SJAG_04073","SJAG_01181","SJAG_04595","SJAG_02590","SJAG_02845","SJAG_02733","SJAG_01453","SJAG_01835","SJAG_04868","SJAG_05001","SJAG_01321","SJAG_03444","SJAG_02446","SJAG_04620","SJAG_03631","SJAG_01171","SJAG_01888","SJAG_00974","SJAG_03646","SJAG_01017","SJAG_00163","SJAG_02718","SJAG_02192","SJAG_04462","SJAG_01290","SJAG_03013","SJAG_02649","SJAG_01227","SJAG_03295","SJAG_00667"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72799,72835,73068,76256,76919,77019,77602,78178,78546,79640,81307,81992,91149,104274,111896,79656],"is_not":false,"summary":null,"term":"GO:0031505"},{"annotations":[93587,90515,92060,90026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030476"},{"annotations":[101969,103764,103763,113169,95832,90909,109906,90092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904541"},{"annotations":[112832,73285,89409],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0060237"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the fungal-type cell wall.","definition_xrefs":["GOC:jl","GOC:mah","GOC:mtg_sensu","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall organization","termid":"GO:0071555"},{"relation_name":"is_a","term_name":"fungal-type cell wall organization or biogenesis","termid":"GO:0071852"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00163":null,"SJAG_00218":null,"SJAG_00667":null,"SJAG_00974":null,"SJAG_01017":null,"SJAG_01171":null,"SJAG_01181":null,"SJAG_01227":null,"SJAG_01290":null,"SJAG_01321":null,"SJAG_01453":null,"SJAG_01835":null,"SJAG_01888":null,"SJAG_02192":null,"SJAG_02446":null,"SJAG_02590":null,"SJAG_02649":null,"SJAG_02718":null,"SJAG_02733":null,"SJAG_02845":null,"SJAG_03013":null,"SJAG_03295":null,"SJAG_03444":null,"SJAG_03631":null,"SJAG_03646":null,"SJAG_04073":null,"SJAG_04462":null,"SJAG_04595":null,"SJAG_04620":null,"SJAG_04868":null,"SJAG_05001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"fungal-type cell wall organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"beta-glucan-containing cell wall organization and biogenesis","type":"related"},{"name":"chitin- and beta-glucan-containing cell wall organisation","type":"narrow"},{"name":"chitin- and beta-glucan-containing cell wall organization and biogenesis","type":"narrow"},{"name":"chitin-containing cell wall organization and biogenesis","type":"related"},{"name":"fungal-type cell wall organization and biogenesis","type":"related"}],"termid":"GO:0031505","terms_by_termid":{"GO:0030476":null,"GO:0031505":null,"GO:0060237":null,"GO:1904541":null}}


id: PBO:0077824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 target 3C","termid":"PBO:0077824"}


id: MONDO:0004784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A asthma with a basis in a pathological type I hypersensitivity reaction.","definition_xrefs":["MONDO:patterns/allergic_form_of_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allergic respiratory disease","termid":"MONDO:0000771"},{"relation_name":"is_a","term_name":"asthma","termid":"MONDO:0004979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"allergic asthma","secondary_identifiers":["DOID:9415","UMLS:C0155877","icd11.foundation:1870104478","MEDGEN:102343","ICD9:493.0","SCTID:389145006"],"synonyms":[{"name":"allergic form of asthma","type":"exact"},{"name":"atopic asthma","type":"related"},{"name":"extrinsic asthma with acute exacerbation","type":"exact"},{"name":"extrinsic asthma with status asthmaticus","type":"exact"}],"termid":"MONDO:0004784","xrefs":{"Monarch":{"xref_id":"0004784"}}}


id: PBO:0086842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative pulcherrimin transporter; involved in uptake of iron-transporting siderophore, pulcherrimin","termid":"PBO:0086842"}


id: PBO:0053117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipocalin 6","termid":"PBO:0053117"}


id: GO:0001315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of reactive oxygen species, where the change varies according to the age of the cell or organism.","definition_xrefs":["GOC:jh","PMID:12044938"],"gene_count":0,"genotype_count":0,"name":"obsolete age-dependent response to reactive oxygen species (obsolete GO:0001315)","synonyms":[{"name":"age-dependent response to AOS","type":"exact"},{"name":"age-dependent response to ROI","type":"exact"},{"name":"age-dependent response to ROS","type":"exact"},{"name":"age-dependent response to active oxygen species","type":"exact"},{"name":"age-dependent response to reactive oxidative species","type":"exact"},{"name":"age-dependent response to reactive oxygen intermediate","type":"exact"}],"termid":"GO:0001315"}


id: GO:0006130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 6-phosphofructokinase reduction (obsolete GO:0006130)","synonyms":[{"name":"6-phosphofructokinase reduction","type":"exact"}],"termid":"GO:0006130"}


id: PBO:0002410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor zf-C2H2 type (predicted)","termid":"PBO:0002410"}


id: MOD:00937
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Post-translational","definition_xrefs":["Unimod:505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"levuglandinyl (prostaglandin H2) adduct","termid":"MOD:00846"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Levuglandinyl - arginine lactam adduct","synonyms":[{"name":"LG-lactam-R","type":"related"},{"name":"Levuglandinyl - arginine lactam adduct","type":"related"}],"termid":"MOD:00937"}


id: PBO:0058663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6791","termid":"PBO:0058663"}


id: PBO:0091503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IRC1-L/borderline left, centromere proximal ncRNA","termid":"PBO:0091503"}


id: MONDO:0010360
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"young-onset Parkinson disease","termid":"MONDO:0017279"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Parkinson disease 12","secondary_identifiers":["GARD:18604","MESH:C564486","OMIM:300557","MEDGEN:337173","UMLS:C1845165"],"synonyms":[{"name":"PARK12","type":"exact"},{"name":"Parkinson disease 12","type":"exact"},{"name":"Parkinson disease, X-linked","type":"related"}],"termid":"MONDO:0010360","xrefs":{"Monarch":{"xref_id":"0010360"}}}


id: FYPO:0002846
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of ungerminated spores, germinated spores and small vegetative cells. The spheroid cells arise from division of some of the germinated spores, and may form a microcolony of up to 64 cells.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including spores, germinated spores and small cells (obsolete FYPO:0002846)","termid":"FYPO:0002846"}


id: GO:0032745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-21 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-21 production","termid":"GO:0032665"},{"relation_name":"positively_regulates","term_name":"interleukin-21 production","termid":"GO:0032625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-21 production","secondary_identifiers":["GO:0045392"],"synonyms":[{"name":"activation of interleukin-21 production","type":"narrow"},{"name":"positive regulation of IL-21 production","type":"exact"},{"name":"positive regulation of interleukin-21 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-21 production","type":"narrow"},{"name":"up regulation of interleukin-21 production","type":"exact"},{"name":"up-regulation of interleukin-21 production","type":"exact"},{"name":"upregulation of interleukin-21 production","type":"exact"}],"termid":"GO:0032745"}


id: GO:0030749
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + loganate = S-adenosyl-L-homocysteine + loganin.","definition_xrefs":["EC:2.1.1.50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"loganate O-methyltransferase activity","secondary_identifiers":["RHEA:12508","MetaCyc:LOGANATE-O-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:loganate 11-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:loganic acid methyltransferase activity","type":"related"},{"name":"loganate methyltransferase activity","type":"related"}],"termid":"GO:0030749"}


id: PBO:0063034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAK1 interacting protein 1","termid":"PBO:0063034"}


id: PBO:0116981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FILIP1 antisense RNA 1","termid":"PBO:0116981"}


id: FYPO:0008371
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell surface is decreased during a cellular response to salt stress.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell surface","termid":"FYPO:0008258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to cell surface during cellular response to salt stress","termid":"FYPO:0008371"}


id: GO:0034430
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The single layer of phopholipids surrounding a lipid storage body.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle-enclosing lipid monolayer","termid":"GO:0034646"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"},{"relation_name":"part_of","term_name":"monolayer-surrounded lipid storage body","termid":"GO:0012511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"monolayer-surrounded lipid storage body outer lipid monolayer","synonyms":[{"name":"lipid droplet outer lipid monolayer","type":"related"},{"name":"lipid storage body surface lipid monolayer","type":"exact"},{"name":"oil body outer lipid monolayer","type":"exact"},{"name":"oleosome outer lipid monolayer","type":"exact"},{"name":"spherosome outer lipid monolayer","type":"exact"}],"termid":"GO:0034430"}


id: PBO:0085040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential component of U5 snRNP; nuclear protein; physically interacts with Irr1p of cohesin complex; may link together proteins involved in chromosome segregation, mRNA splicing and DNA replication","termid":"PBO:0085040"}


id: GO:0033461
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GGU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0060090","GO:0005488"],"is_obsolete":false,"name":"GGU codon-amino acid adaptor activity","synonyms":[{"name":"GGT codon-amino acid adaptor activity","type":"exact"},{"name":"glycine tRNA","type":"related"}],"termid":"GO:0033461"}


id: GO:0075329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of symbiont arbuscule formation for nutrient acquisition from host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"modulation of formation of structure involved in a symbiotic process","termid":"GO:0044145"},{"relation_name":"is_a","term_name":"regulation of feeding behavior","termid":"GO:0060259"},{"relation_name":"regulates","term_name":"formation of arbuscule for nutrient acquisition","termid":"GO:0075328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of arbuscule formation for nutrient acquisition from host","termid":"GO:0075329"}


id: PBO:0004653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med10","termid":"PBO:0004653"}


id: PBO:0078191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 5-1","termid":"PBO:0078191"}


id: PBO:0057072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 152","termid":"PBO:0057072"}


id: PBO:0087774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of U3-containing Small Subunit (SSU) processome complex; involved in production of 18S rRNA and assembly of small ribosomal subunit; disrupts silencing when overproduced; mutant has increased aneuploidy tolerance; essential gene","termid":"PBO:0087774"}


id: PBO:0046770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome component 10","termid":"PBO:0046770"}


id: MONDO:0006791
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe, intractable vomiting during pregnancy (usually the first trimester) accompanied by dehydration, weight loss, and electrolyte imbalances.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperemesis gravidarum","secondary_identifiers":["MESH:D006939","EFO:1000971","UMLS:C0020450","MEDGEN:43776","MedDRA:10020614","SCTID:14094001","HP:0012188"],"synonyms":[{"name":"hyperemesis gravidarum","type":"exact"},{"name":"hyperemesis gravidarum (disease)","type":"exact"},{"name":"pernicious vomiting of pregnancy","type":"related"},{"name":"pregnancy pernicious vomiting","type":"related"}],"termid":"MONDO:0006791","xrefs":{"Monarch":{"xref_id":"0006791"}}}


id: GO:0090707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that determines the orientation of a plant organ or tissue with reference to an axis.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of anatomical structure orientation","termid":"GO:0048560"},{"relation_name":"part_of","term_name":"plant organ morphogenesis","termid":"GO:1905392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of plant organ orientation","termid":"GO:0090707"}


id: PBO:0078001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAF3 interacting protein 2","termid":"PBO:0078001"}


id: PBO:0051154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-33-2 (pseudogene)","termid":"PBO:0051154"}


id: GO:0009389
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dimethyl sulfoxide + H+ = dimethyl sulfide + H2O.","definition_xrefs":["PMID:8658134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"dimethyl sulfoxide reductase activity","synonyms":[{"name":"dimethyl sulphoxide reductase activity","type":"exact"}],"termid":"GO:0009389"}


id: MONDO:0024772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder, X-linked, syndromic, Pilorge type","secondary_identifiers":["OMIM:301076","DOID:0070422","UMLS:C5676881","MEDGEN:1803486"],"synonyms":[{"name":"MRXSP","type":"exact"},{"name":"intellectual developmental disorder, X-linked, syndromic, Pilorge type","type":"exact"}],"termid":"MONDO:0024772","xrefs":{"Monarch":{"xref_id":"0024772"}}}


id: PBO:0076602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1D22A divergent transcript","termid":"PBO:0076602"}


id: PBO:0077405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM139 antisense RNA 1","termid":"PBO:0077405"}


id: PBO:0051774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif and ankyrin repeat containing 1","termid":"PBO:0051774"}


id: MONDO:0002627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An osteosarcoma characterized by the presence of atypical cartilage of variable cellularity. It may or may not be associated with the presence of myxoid areas or focal bone formation.","definition_xrefs":["NCIT:C4021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conventional osteosarcoma","termid":"MONDO:0002631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"chondroblastic osteosarcoma","secondary_identifiers":["ONCOTREE:CHOS","UMLS:C0279603","ICDO:9181/3","DOID:3372","MEDGEN:79013"],"synonyms":[{"name":"CHOS","type":"related"},{"name":"chondroblastic osteogenic sarcoma","type":"exact"},{"name":"chondroblastic osteosarcoma","type":"exact"},{"name":"chondroblastic osteosarcoma (morphologic abnormality)","type":"exact"},{"name":"chondrosarcomatous osteogenic sarcoma","type":"exact"}],"termid":"MONDO:0002627","xrefs":{"Monarch":{"xref_id":"0002627"}}}


id: GO:0007097
data:
  {"annotated_genes":["SJAG_00140","SJAG_02431","SJAG_00594","SJAG_04597","SJAG_01863","SJAG_03673","SJAG_02651","SJAG_01662","SJAG_00113","SJAG_02737","SJAG_00397","SJAG_04001","SJAG_02286","SJAG_00368","SJAG_04387","SJAG_03835","SJAG_04003","SJAG_01613","SJAG_03264","SJAG_05185","SJAG_03073","SJAG_02561","SJAG_02509","SJAG_04143","SJAG_01370","SJAG_02045"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106369,106700,114626],"is_not":false,"summary":null,"term":"GO:0007097"},{"annotations":[92805,97024,113255,93197,104787,105078,112904,115804,99390,93661,102545,118807,89571],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030989"},{"annotations":[103255,108422,113078],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032118"},{"annotations":[115806,118811,103266,76764,111456,72522,109265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098863"},{"annotations":[101046,99465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090561"},{"annotations":[99392,78071,101047,93199,89575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000743"},{"annotations":[96226],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1902854"}]},"cv_name":"biological_process","definition":"The directed movement of the nucleus to a specific location within a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"},{"relation_name":"is_a","term_name":"nucleus localization","termid":"GO:0051647"},{"relation_name":"is_a","term_name":"establishment of organelle localization","termid":"GO:0051656"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00368":null,"SJAG_00397":null,"SJAG_00594":null,"SJAG_01370":null,"SJAG_01613":null,"SJAG_01662":null,"SJAG_01863":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02431":null,"SJAG_02509":null,"SJAG_02561":null,"SJAG_02651":null,"SJAG_02737":null,"SJAG_03073":null,"SJAG_03264":null,"SJAG_03673":null,"SJAG_03835":null,"SJAG_04001":null,"SJAG_04003":null,"SJAG_04143":null,"SJAG_04387":null,"SJAG_04597":null,"SJAG_05185":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"nuclear migration","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0040023"],"synonyms":[{"name":"establishment of cell nucleus localization","type":"related"},{"name":"establishment of localization of nucleus","type":"related"},{"name":"establishment of nucleus localisation","type":"related"},{"name":"establishment of nucleus localization","type":"related"},{"name":"establishment of position of nucleus","type":"exact"},{"name":"nuclear movement","type":"exact"},{"name":"nuclear positioning","type":"exact"},{"name":"nucleus migration","type":"exact"},{"name":"nucleus positioning","type":"exact"},{"name":"positioning of nucleus","type":"exact"}],"termid":"GO:0007097","terms_by_termid":{"GO:0000743":null,"GO:0007097":null,"GO:0030989":null,"GO:0032118":null,"GO:0090561":null,"GO:0098863":null,"GO:1902854":null}}


id: PBO:0084679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ATP-dependent RNA helicase of the DEAD-box family; required for assembly of the large subunit of mitochondrial ribosomes; binds to the large subunit rRNA, 21S_rRNA; localizes to the matrix face of the mitochondrial inner membrane and associates with the large subunit precursor and with mature ribosomes","termid":"PBO:0084679"}


id: PR:P40383
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 5'-3' exoribonuclease 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12341:SF7","PRO:DNx","OMA:SCHPO00728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-3' exoribonuclease 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A5.14","secondary_identifiers":["UniProtKB:P40383"],"synonyms":[{"name":"Exo II (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-XRN1","type":"exact"},{"name":"exonuclease 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"exonuclease II (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"p140 (Schizosaccharomyces pombe 972h-)","type":"broad"}],"termid":"PR:P40383"}


id: PBO:0055619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3058","termid":"PBO:0055619"}


id: PBO:0066945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 247","termid":"PBO:0066945"}


id: GO:0034922
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4,5-dihydroxypyrene + O2 = phenanthrene-4,5-dicarboxylate + 2 H+.","definition_xrefs":["UM-BBD_reactionID:r0936"],"gene_count":0,"genotype_count":0,"name":"obsolete 4,5-dihydroxypyrene dioxygenase activity (obsolete GO:0034922)","termid":"GO:0034922"}


id: PBO:0073026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stimulator of chondrogenesis 1","termid":"PBO:0073026"}


id: PBO:0040386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit B1","termid":"PBO:0040386"}


id: GO:0006863
data:
  {"annotated_genes":["SJAG_04717","SJAG_03777","SJAG_00760"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098702"},{"annotations":[114402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098710"},{"annotations":[117009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140140"},{"annotations":[81683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042906"}]},"cv_name":"biological_process","definition":"The directed movement of purine bases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase transport","termid":"GO:0015851"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00760":null,"SJAG_03777":null,"SJAG_04717":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"purine nucleobase transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0015852"],"synonyms":[{"name":"purine base transmembrane transport","type":"exact"},{"name":"purine base transport","type":"exact"},{"name":"purine transmembrane transport","type":"related"},{"name":"purine transport","type":"related"}],"termid":"GO:0006863","terms_by_termid":{"GO:0042906":null,"GO:0098702":null,"GO:0098710":null,"GO:0140140":null}}


id: PBO:0110029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP144 pseudogene 1","termid":"PBO:0110029"}


id: GO:0035226
data:
  {"annotated_genes":["SJAG_03494"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80490],"is_not":false,"summary":null,"term":"GO:0035226"}]},"cv_name":"molecular_function","definition":"Binding to the catalytic subunit of glutamate-cysteine ligase.","definition_xrefs":["PMID:12954617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03494":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"glutamate-cysteine ligase catalytic subunit binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0035226","terms_by_termid":{"GO:0035226":null}}


id: PBO:0041350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 open reading frame 86, pseudogene","termid":"PBO:0041350"}


id: MONDO:0018844
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urachal cyst is a congenital urachal anomaly characterized by a failure of complete closure of the urachus, in which both ends are closed but the central lumen remains patent. It is typically asymptomatic but may become clinically significant when infected, presenting as a mass in the umbilical region accompanied by abdominal pain and fever.","definition_xrefs":["Orphanet:488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital urachal anomaly","termid":"MONDO:0018565"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urachal cyst","secondary_identifiers":["icd11.foundation:1125432593","UMLS:C0041915","MESH:D014496","SCTID:17234001","GARD:5425","HP:0012618","MedDRA:10065375","MEDGEN:21770","NCIT:C85216"],"synonyms":[{"name":"urachal cyst","type":"exact"},{"name":"urachal cyst (disease)","type":"exact"}],"termid":"MONDO:0018844","xrefs":{"Monarch":{"xref_id":"0018844"}}}


id: PBO:0004219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi membrane protein involved in vesicle-medated transport (predicted)","termid":"PBO:0004219"}


id: PBO:0015652
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-occupancy","termid":"PBO:0015652"}


id: MONDO:0007764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sclerozing bone disorder characterized by generalized skeletal densification, particularly of the cranial vault and tubular long bones, which is not associated to an increased risk of fracture.","definition_xrefs":["Orphanet:2790"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"hyperostosis","termid":"MONDO:0002185"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal dominant osteosclerosis, Worth type","secondary_identifiers":["DOID:0080037","MEDGEN:140932","icd11.foundation:1038854228","OMIM:144750","OMIM:607636","UMLS:C0432273","GARD:390","SCTID:254131007"],"synonyms":[{"name":"Ostéosclérose autosomique dominante type Worth","type":"exact"},{"name":"VBCH2","type":"related"},{"name":"Van Buchem disease type 2","type":"related"},{"name":"Van Buchem disease, type 2","type":"related"},{"name":"Worth syndrome","type":"exact"},{"name":"Worth's syndrome","type":"exact"},{"name":"autosomal dominant endosteal hyperostosis","type":"exact"},{"name":"autosomal dominant osteosclerosis","type":"exact"},{"name":"benign form of Worth hyperostosis corticalis generalisata with torus platinus","type":"exact"},{"name":"endosteal hyperostosis, Worth type","type":"exact"},{"name":"endosteal hyperostosis, autosomal dominant","type":"related"},{"name":"hyperostosis corticalis generalisata, benign form of Worth with torus palatinus","type":"related"},{"name":"hyperostosis corticalis generalisata, benign form of Worth, with torus palatinus","type":"related"},{"name":"hyperostosis, endosteal","type":"exact"},{"name":"osteosclerosis of the skull and enlarged mandible","type":"related"},{"name":"osteosclerosis, autosomal dominant","type":"related"},{"name":"osteosclerosis, autosomal dominant, Worth type","type":"related"}],"termid":"MONDO:0007764","xrefs":{"Monarch":{"xref_id":"0007764"}}}


id: PBO:0000951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFS myo-inositol transporter","termid":"PBO:0000951"}


id: GO:0035488
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing a C/T mispair.","definition_xrefs":["GOC:bf","GOC:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatched DNA binding","termid":"GO:0030983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"cytosine/thymine mispair binding","synonyms":[{"name":"C/T mispair binding","type":"exact"},{"name":"T/C mispair binding","type":"exact"},{"name":"thymine/cytosine mispair binding","type":"exact"}],"termid":"GO:0035488"}


id: GO:0071047
data:
  {"annotated_genes":["SJAG_04006","SJAG_03745","SJAG_03179","SJAG_00854","SJAG_04321","SJAG_01818","SJAG_04824","SJAG_04153","SJAG_04084","SJAG_01191","SJAG_01521","SJAG_04818"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99054,103900,94059,107090,109293,108299,117306,94889,97731,117745,120180,106222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071042"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a messenger RNA (mRNA) molecule, initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target mRNA.","definition_xrefs":["GOC:dgf","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA catabolic process","termid":"GO:0006402"},{"relation_name":"is_a","term_name":"mRNA destabilization","termid":"GO:0061157"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_03179":null,"SJAG_03745":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"polyadenylation-dependent mRNA catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"poly(A)-dependent mRNA catabolic process","type":"related"}],"termid":"GO:0071047","terms_by_termid":{"GO:0071042":null}}


id: PBO:0083127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-ribulokinase; carbohydrate kinase that specifically converts D-ribulose to D-ribulose 5-phosphate during pentose metabolism; null mutant accumulates D-ribulose and the precursor ribitol; proposed to function as a D-ribulose metabolic repair enzyme; member of the FGGY family of carbohydrate kinases; human homolog, FGGY, is involved in both D-ribulose and ribitol metabolism; human FGGY has been linked to both sporadic amyotrophic lateral sclerosis and bipolar disorder","termid":"PBO:0083127"}


id: PBO:0001908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLASP family microtubule-associated protein","termid":"PBO:0001908"}


id: PBO:0039078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acylglycerol-3-phosphate O-acyltransferase 5","termid":"PBO:0039078"}


id: PBO:0047527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYVE, RhoGEF and PH domain containing 1","termid":"PBO:0047527"}


id: MONDO:1012208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"perosomus elumbis, non-human animal","termid":"MONDO:1011668"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perosomus elumbis, horse","secondary_identifiers":["OMIA:000789-9796"],"termid":"MONDO:1012208","xrefs":{"Monarch":{"xref_id":"1012208"}}}


id: MONDO:0005976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A contagious bacterial infection caused by the spirochete Treponema pallidum. It is a sexually transmitted disorder, although it can also be transmitted from the mother to the fetus in utero. Typically, it is initially manifested with a single sore which heals without treatment. If the infection is left untreated, the initial stage is followed by skin rash and mucous membrane lesions. A late stage follows, which is characterized by damage of the internal organs, including the nervous system.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"Treponema infectious disease","termid":"MONDO:0007000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syphilis","secondary_identifiers":["MESH:D013587","SCTID:76272004","EFO:0007504","MedDRA:10062120","DOID:4166","MEDGEN:21447","UMLS:C0039128","icd11.foundation:455894495","ICD9:097.9","NCIT:C35055"],"synonyms":[{"name":"Treponema pallidum caused disease or disorder","type":"exact"},{"name":"Treponema pallidum disease or disorder","type":"exact"},{"name":"Treponema pallidum infectious disease","type":"exact"},{"name":"syphilitic chancre","type":"exact"}],"termid":"MONDO:0005976","xrefs":{"Monarch":{"xref_id":"0005976"}}}


id: GO:0044675
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of four polypeptides which also contains tungsten, a molybdopterin guanine dinucleotide, and iron-sulfur clusters. This protein complex catalyzes the reversible conversion of CO2 and methanofuran to formylmethanofuran during methanogenesis.","definition_xrefs":["GOC:mengo_curators","PMID:8125106","PMID:8575452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"formyl-methanofuran dehydrogenase (tungsten enzyme) complex","termid":"GO:0044675"}


id: GO:0021798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of specific regional progenitor domains along the dorsal-ventral axis in the developing forebrain.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dorsal/ventral pattern formation","termid":"GO:0009953"},{"relation_name":"part_of","term_name":"forebrain regionalization","termid":"GO:0021871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain dorsal/ventral pattern formation","synonyms":[{"name":"forebrain dorsal-ventral pattern formation","type":"exact"},{"name":"forebrain dorsoventral pattern formation","type":"exact"}],"termid":"GO:0021798"}


id: GO:0031205
data:
  {"annotated_genes":["SJAG_02354","SJAG_00175","SJAG_02588","SJAG_03955"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92394,74904,97549,111471],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031207"}]},"cv_name":"cellular_component","definition":"An endoplasmic reticulum membrane-associated complex involved in the translocation of proteins that are targeted to the ER. In yeast, this complex consists of two subcomplexes, namely, the Sec61 complex and the Sec62/Sec63 complex.","definition_xrefs":["PMID:14617809","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"rough endoplasmic reticulum membrane","termid":"GO:0030867"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00175":null,"SJAG_02354":null,"SJAG_02588":null,"SJAG_03955":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005783","GO:0005789","GO:0005737"],"is_obsolete":false,"name":"endoplasmic reticulum Sec complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0031205","terms_by_termid":{"GO:0031207":null}}


id: GO:0097092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving polyacyltrehalose, a pentaacylated, trehalose-based glycolipid.","definition_xrefs":["PMID:19729090","GOC:rs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid metabolic process","termid":"GO:0006664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"polyacyltrehalose metabolic process","synonyms":[{"name":"polyacyltrehalose metabolism","type":"exact"}],"termid":"GO:0097092"}


id: PBO:0002243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0103 family","termid":"PBO:0002243"}


id: GO:0042029
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of 14-Ala-Leu-15 in insulin B chain and cleavage of 413-Lys-Leu-414 in alpha chain of fibrinogen.","definition_xrefs":["PMID:7725320"],"gene_count":0,"genotype_count":0,"name":"obsolete fibrolase activity (obsolete GO:0042029)","synonyms":[{"name":"Agkistrodon contortrix contortrix metalloproteinase activity","type":"narrow"},{"name":"Agkistrodon contortrix contortrix venom metalloproteinase activity","type":"narrow"},{"name":"fibrinolytic proteinase activity","type":"related"},{"name":"fibrolase activity","type":"exact"}],"termid":"GO:0042029"}


id: PBO:0047098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 151 member A","termid":"PBO:0047098"}


id: PR:000050562
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 2 subunit alpha (Schizosaccharomyces pombe) that has been phosphorylated at the position equivalent to Ser-52 of the amino acid sequence represented by UniProtKB:P56286. UniProtKB:P56286, Ser-52, MOD:00046.","definition_xrefs":["PMID:28771613","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eukaryotic translation initiation factor 2 subunit alpha (Schizosaccharomyces pombe)","termid":"PR:000050560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tif211/Phos(S52)","pombase_gene_id":"SPAC3G9.09c","synonyms":[{"name":"PomBase_original_PRO_term_name: eukaryotic translation initiation factor 2 subunit alpha phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-EIF2S1/Phos:1","type":"exact"},{"name":"UniProtKB:P56286, Ser-52, MOD:00046","type":"exact"},{"name":"UniProtKB:P56286-1, Ser-52, MOD:00046","type":"narrow"},{"name":"tif211/Phos(S52)","type":"exact"}],"termid":"PR:000050562"}


id: PBO:0060996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHL repeat containing E3 ubiquitin protein ligase 1","termid":"PBO:0060996"}


id: SO:0001272
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A noncoding RNA that binds to a specific amino acid to allow that amino acid to be used by the ribosome during translation of RNA.","direct_ancestors":[{"relation_name":"has_quality","term_name":"tRNA_encoding","termid":"SO:0000663"},{"relation_name":"is_a","term_name":"sncRNA_gene","termid":"SO:0002342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA_gene","synonyms":[{"name":"tRNA gene","type":"exact"}],"termid":"SO:0001272"}


id: MONDO:0100057
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subset of exercise-induced anaphylaxis in which symptoms develop if exertion takes place within a few hours of eating a specific food. In the case of food-dependent exercise-induced anaphylaxis, neither the food nor the exercise alone is enough to cause anaphylaxis.","definition_xrefs":["GARD:0006392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exercise-induced anaphylaxis","termid":"MONDO:0100056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"food-dependent exercise-induced anaphylaxis","secondary_identifiers":["MEDGEN:1780757","icd11.foundation:854135859","UMLS:C5546138"],"termid":"MONDO:0100057","xrefs":{"Monarch":{"xref_id":"0100057"}}}


id: PBO:0075761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/arginine repetitive matrix 1 pseudogene 3","termid":"PBO:0075761"}


id: GO:1900180
data:
  {"annotated_genes":["SJAG_03048","SJAG_01084","SJAG_01311","SJAG_03453","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"},{"annotations":[116330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900181"},{"annotations":[92660,96184,104205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to nucleus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to nucleus","termid":"GO:0034504"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01084":null,"SJAG_01311":null,"SJAG_02592":null,"SJAG_03048":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to nucleus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of protein localisation to nucleus","type":"exact"},{"name":"regulation of protein localization in cell nucleus","type":"exact"},{"name":"regulation of protein localization in nucleus","type":"exact"}],"termid":"GO:1900180","terms_by_termid":{"GO:0042307":null,"GO:0042308":null,"GO:1900181":null}}


id: MONDO:0011508
data:
  {"annotated_genes":["SJAG_02460","SJAG_00980"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87968,87969],"is_not":false,"summary":null,"term":"MONDO:0011508"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-Hodgkin lymphoma","termid":"MONDO:0018908"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00980":null,"SJAG_02460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"lymphoma, non-Hodgkin, familial","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1648388","UMLS:C4721532","OMIM:605027","ICD9:202.80","SCTID:118601006"],"synonyms":[{"name":"lymphoma, follicular, somatic","type":"exact"},{"name":"lymphoma, non-Hodgkin","type":"exact"},{"name":"lymphoma, non-Hodgkin, familial","type":"exact"},{"name":"lymphoma, non-Hodgkin, somatic","type":"exact"},{"name":"non-Hodgkin lymphoma","type":"related"}],"termid":"MONDO:0011508","terms_by_termid":{"MONDO:0011508":null},"xrefs":{"Monarch":{"xref_id":"0011508"}}}


id: PR:O94716
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fta4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein fta4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1393.04","synonyms":[{"name":"Spom972h-fta4","type":"exact"},{"name":"sim4 complex subunit fta4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sim4-mal2-associated protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94716"}


id: PBO:0079474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twist family bHLH transcription factor 2","termid":"PBO:0079474"}


id: GO:0010725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of primitive erythrocyte differentiation. Primitive erythrocyte differentiation occurs as part of the process of primitive hemopoiesis.","definition_xrefs":["GOC:dph","GOC:tb","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of erythrocyte differentiation","termid":"GO:0045646"},{"relation_name":"regulates","term_name":"primitive erythrocyte differentiation","termid":"GO:0060319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of primitive erythrocyte differentiation","synonyms":[{"name":"regulation of primitive RBC differentiation","type":"exact"},{"name":"regulation of primitive erythropoeisis","type":"exact"},{"name":"regulation of primitive red blood cell differentiation","type":"exact"}],"termid":"GO:0010725"}


id: GO:0030346
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein phosphatase 2B.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphatase binding","termid":"GO:0019903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"protein phosphatase 2B binding","synonyms":[{"name":"calcineurin binding","type":"exact"},{"name":"protein phosphatase 3 binding","type":"related"}],"termid":"GO:0030346"}


id: MONDO:0016364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Joubert syndrome with ocular defect is, along with pure JS, the most frequent subtype of Joubert syndrome and related disorders (JSRD) characterized by the neurological features of JS associated with retinal dystrophy.","definition_xrefs":["Orphanet:220493"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"Joubert syndrome and related disorders","termid":"MONDO:0015369"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"},{"relation_name":"is_a","term_name":"disorder of visual system","termid":"MONDO:0024458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0020022","MONDO:0006025"],"is_obsolete":false,"name":"Joubert syndrome with ocular defect","secondary_identifiers":["SCTID:716998009","MEDGEN:909607","UMLS:C4274118","GARD:10168","ICD10CM:H35.5","icd11.foundation:1358617785"],"synonyms":[{"name":"JBTS3","type":"related"},{"name":"JS-O","type":"exact"},{"name":"Joubert syndrome 3","type":"related"},{"name":"Joubert syndrome with ocular anomalies","type":"related"},{"name":"Joubert syndrome with retinopathy","type":"exact"}],"termid":"MONDO:0016364","xrefs":{"Monarch":{"xref_id":"0016364"}}}


id: PBO:0059572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1X","termid":"PBO:0059572"}


id: PBO:0060798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit S5 pseudogene 4","termid":"PBO:0060798"}


id: GO:1900808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of fumigaclavine C.","definition_xrefs":["GOC:TermGenie","GOC:di"],"gene_count":0,"genotype_count":0,"name":"obsolete fumigaclavine C catabolic process (obsolete GO:1900808)","synonyms":[{"name":"fumigaclavine C breakdown","type":"exact"},{"name":"fumigaclavine C catabolism","type":"exact"},{"name":"fumigaclavine C degradation","type":"exact"}],"termid":"GO:1900808"}


id: MONDO:0008383
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic, systemic autoimmune disorder characterized by inflammation in the synovial membranes and articular surfaces. It manifests primarily as a symmetric, erosive polyarthritis that spares the axial skeleton and is typically associated with the presence in the serum of rheumatoid factor.","definition_xrefs":["NCIT:C2884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of musculoskeletal system","termid":"MONDO:0000589"},{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"},{"relation_name":"is_a","term_name":"arthritic joint disease","termid":"MONDO:0005578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"rheumatoid arthritis","secondary_identifiers":["MEDGEN:2078","Orphanet:284130","DOID:7148","OMIM:180300","ICD9:714.0","MESH:D001172","EFO:0000685","HP:0001370","icd11.foundation:576319925","SCTID:69896004","UMLS:C0003873"],"synonyms":[{"name":"RA","type":"exact"},{"name":"arthritis or polyarthritis, rheumatic","type":"exact"},{"name":"arthritis, rheumatoid","type":"exact"},{"name":"atrophic arthritis","type":"broad"},{"name":"autoimmune arthritis","type":"exact"},{"name":"rheumatoid arthritis","type":"exact"},{"name":"rheumatoid arthritis, progression of","type":"exact"},{"name":"rheumatoid arthritis, susceptibility to","type":"related"}],"termid":"MONDO:0008383","xrefs":{"Monarch":{"xref_id":"0008383"}}}


id: PBO:0056458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS1 proto-oncogene, G protein-coupled receptor","termid":"PBO:0056458"}


id: FYPO:0001042
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell of normal morphology that undergoes one or two rounds of cell division, and then dies.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination","termid":"FYPO:0000316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, single or double cell division","synonyms":[{"name":"inviable following spore germination, single or double cell division","type":"exact"},{"name":"inviable germinated spore, single or double cell division","type":"exact"},{"name":"lethal after spore germination, single or double cell division","type":"exact"}],"termid":"FYPO:0001042"}


id: PBO:0066882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 182","termid":"PBO:0066882"}


id: GO:0140537
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A molecular function regulator that increases the activity of a transcription regulator via direct binding and/or post-translational modification.","definition_xrefs":["PMID:9597751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular function activator activity","termid":"GO:0140677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140677","GO:0098772"],"is_obsolete":false,"name":"transcription regulator activator activity","termid":"GO:0140537"}


id: MOD:00586
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylation to pyridyl thiol","synonyms":[{"name":"PET","type":"related"},{"name":"phosphorylation to pyridyl thiol","type":"related"}],"termid":"MOD:00586"}


id: PBO:0029979
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-fragmented_nucleus","termid":"PBO:0029979"}


id: MONDO:1012121
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary hypothyroidism, non-human animal","termid":"MONDO:1011678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary hypothyroidism, dog","secondary_identifiers":["OMIA:000538-9615"],"termid":"MONDO:1012121","xrefs":{"Monarch":{"xref_id":"1012121"}}}


id: PBO:0080684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain, phosphoinositide interacting 1","termid":"PBO:0080684"}


id: PBO:0113115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic reticulum protein of unknown function; deletion confers resistance to fluconazole and to osmotic stress","termid":"PBO:0113115"}


id: PBO:0011464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA methyltransferase, implicated in ribosome biogenesis (predicted)","termid":"PBO:0011464"}


id: GO:0016428
data:
  {"annotated_genes":["SJAG_02099","SJAG_01314","SJAG_00325"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72333,81208,107610],"is_not":false,"summary":null,"term":"GO:0016428"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a cytidine in tRNA + S-adenosyl-L-methionine = a 5-methylcytidine in tRNA + S-adenosyl-L-homocysteine + H+. This modification can occur on seversal residues, including cytidine(34), cytidine(40), cytidine(48), and cytidine(49).","definition_xrefs":["RHEA:61468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (cytidine) methyltransferase activity","termid":"GO:0016427"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00325":null,"SJAG_01314":null,"SJAG_02099":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0140098","GO:0003824","GO:0140101","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"tRNA (cytidine-5-)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6785438","Reactome:R-HSA-8932765","Reactome:R-HSA-6785409","Reactome:R-HSA-6782388","Reactome:R-HSA-6782419"],"synonyms":[{"name":"S-adenosyl-L-methionine:tRNA (cytosine-5-)-methyltransferase activity","type":"related"},{"name":"tRNA (cytosine-5-)-methyltransferase activity","type":"exact"},{"name":"transfer RNA cytosine 5-methyltransferase activity","type":"related"},{"name":"transfer ribonucleate cytosine 5-methyltransferase activity","type":"related"}],"termid":"GO:0016428","terms_by_termid":{"GO:0016428":null}}


id: GO:0007272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which glial cells envelop neuronal cell bodies and/or axons to form an insulating layer. This can take the form of myelinating or non-myelinating ensheathment.","definition_xrefs":["GOC:tb","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"part_of","term_name":"nervous system development","termid":"GO:0007399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ensheathment of neurons","synonyms":[{"name":"ionic insulation of neurons by glial cells","type":"related"}],"termid":"GO:0007272"}


id: PBO:0057471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 589","termid":"PBO:0057471"}


id: PBO:0088381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal 5'-phosphate synthase (glutamine hydrolysing)","termid":"PBO:0088381"}


id: GO:0047208
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydroxycoumarin + UDP-D-glucose = daphnin + H+ + UDP.","definition_xrefs":["RHEA:14325","EC:2.4.1.104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"o-dihydroxycoumarin 7-O-glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.104-RXN","KEGG_REACTION:R03548"],"synonyms":[{"name":"UDP-glucose:7,8-dihydroxycoumarin 7-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:o-dihydroxycoumarin glucosyltransferase activity","type":"related"},{"name":"UDPglucose:7,8-dihydroxycoumarin 7-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-o-dihydroxycoumarin 7-O-glucosyltransferase activity","type":"related"}],"termid":"GO:0047208"}


id: PBO:0059343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S10 pseudogene 2","termid":"PBO:0059343"}


id: PBO:0052801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 41, pseudogene","termid":"PBO:0052801"}


id: PBO:0075756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine racemase","termid":"PBO:0075756"}


id: MONDO:0011719
data:
  {"annotated_genes":["SJAG_00260","SJAG_03920"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88602,88603],"is_not":false,"summary":null,"term":"MONDO:0011719"}]},"cv_name":"mondo","definition":"Gastrointestinal stromal tumor (GIST) is the most common mesenchymal neoplasm of the gastrointestinal (GI) tract, typically presenting in adults over the age of 40 (mean age 63), and only rarely in children, in various regions of the GI tract, most commonly the stomach or small intestine but also less commonly in the esophagus, appendix, rectum and colon. GISTs can be asymptomatic or present with various non-specific signs, depending on the location and size of tumor, such as loss of appetite, anemia, weight loss, fatigue, abdominal discomfort or fullness, nausea, vomiting, as well as an abdominal mass, blood in stool, and intestinal obstruction. GISTs can also be seen in familial syndromes such as Carney triad and neurofibromatosis type 1.","definition_xrefs":["Orphanet:44890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"mesenchymal tumor of small intestine","termid":"MONDO:0018506"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_03920":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastrointestinal stromal tumor","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICDO:8936/1","MedDRA:10051066","NCIT:C3868","OMIM:606764","ONCOTREE:GIST","MESH:D046152","UMLS:C0238198","GARD:8598","MEDGEN:116049","NORD:1174","SCTID:420120006","ICD10CM:C49.A","DOID:9253"],"synonyms":[{"name":"GANT","type":"exact"},{"name":"GIST","type":"exact"},{"name":"Gastrointestinal Stromal Tumors","type":"exact"},{"name":"gant","type":"exact"},{"name":"gastrointestinal stromal neoplasm","type":"exact"},{"name":"gastrointestinal stromal sarcoma","type":"exact"},{"name":"gastrointestinal stromal tumor","type":"exact"},{"name":"gastrointestinal stromal tumor (gist)","type":"exact"},{"name":"gastrointestinal stromal tumor, familial, isolated cases","type":"exact"},{"name":"gastrointestinal stromal tumor, isolated cases","type":"exact"},{"name":"gastrointestinal stromal tumors","type":"related"},{"name":"gastrointestinal stromal tumour (gist)","type":"exact"},{"name":"gastrointestinal stromal tumours","type":"related"},{"name":"gist","type":"exact"},{"name":"stromal tumor of gastrointestinal tract","type":"exact"},{"name":"stromal tumour of gastrointestinal tract","type":"exact"}],"termid":"MONDO:0011719","terms_by_termid":{"MONDO:0011719":null},"xrefs":{"Monarch":{"xref_id":"0011719"}}}


id: PBO:0036158
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_invertase_activity_during_glucose_starvation","termid":"PBO:0036158"}


id: MONDO:0002516
data:
  {"annotated_genes":["SJAG_03453","SJAG_02426","SJAG_04394","SJAG_02261","SJAG_02231","SJAG_00980","SJAG_02748","SJAG_02226","SJAG_04699","SJAG_01620","SJAG_02049","SJAG_02187","SJAG_01837","SJAG_01082","SJAG_04206"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88268,88269,88270,88273,88271,88266,88272,89147,88267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0005575"},{"annotations":[87624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015278"},{"annotations":[88859,88860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0001056"},{"annotations":[88434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007256"},{"annotations":[88158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007356"},{"annotations":[86973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012249"},{"annotations":[87423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013699"},{"annotations":[87425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013710"},{"annotations":[87436,87435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008018"}]},"cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm involving any part of the digestive system.","definition_xrefs":["NCIT:C4890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"},{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"digestive system neoplasm","termid":"MONDO:0021223"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00980":null,"SJAG_01082":null,"SJAG_01620":null,"SJAG_01837":null,"SJAG_02049":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02231":null,"SJAG_02261":null,"SJAG_02426":null,"SJAG_02748":null,"SJAG_03453":null,"SJAG_04206":null,"SJAG_04394":null,"SJAG_04699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"digestive system cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0751075","DOID:3119","ICD9:239.0","MEDGEN:148231","ICD10CM:C15-C26"],"synonyms":[{"name":"GI tumor","type":"broad"},{"name":"GI tumour","type":"broad"},{"name":"cancer of digestive system","type":"exact"},{"name":"digestive system cancer","type":"exact"},{"name":"gastrointestinal system cancer","type":"exact"},{"name":"gastrointestinal tract cancer","type":"exact"},{"name":"malignant digestive system neoplasm","type":"exact"},{"name":"malignant gastrointestinal neoplasm","type":"exact"},{"name":"malignant gastrointestinal system neoplasm","type":"exact"},{"name":"malignant neoplasm of digestive system","type":"exact"}],"termid":"MONDO:0002516","terms_by_termid":{"MONDO:0001056":null,"MONDO:0005575":null,"MONDO:0007256":null,"MONDO:0007356":null,"MONDO:0008018":null,"MONDO:0012249":null,"MONDO:0013699":null,"MONDO:0013710":null,"MONDO:0015278":null},"xrefs":{"Monarch":{"xref_id":"0002516"}}}


id: PBO:0040638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BASP1 antisense RNA 1","termid":"PBO:0040638"}


id: FYPO:0005977
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a soluble protein forms prions, by refolding and assembling into highly ordered, self-propagating detergent- and protease-resistant polymers. Phenotypes associated with prions are inherited in a non-Mendelian manner.","definition_xrefs":["PMID:24021964","PMID:28191457","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"prion formation","synonyms":[{"name":"prion formation during mitotic cell cycle","type":"related"},{"name":"prion formation during vegetative growth","type":"exact"}],"termid":"FYPO:0005977"}


id: FYPO:0007092
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding by a gene product is increased during a cellular response to zinc ions, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah","PMID:31515876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased DNA binding","termid":"FYPO:0000657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000653","FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"increased DNA binding during cellular response to zinc ion","synonyms":[{"name":"increased DNA binding during cellular response to zinc","type":"exact"}],"termid":"FYPO:0007092"}


id: PBO:0030040
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcription_during_cellular_response_to_iron","termid":"PBO:0030040"}


id: PBO:0059818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 44","termid":"PBO:0059818"}


id: FYPO:0004091
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the microtubule cytoskeleton is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization","termid":"FYPO:0001375"},{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule cytoskeleton","termid":"FYPO:0004090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to microtubule cytoskeleton","synonyms":[{"name":"abolished protein localisation to microtubule cytoskeleton","type":"exact"},{"name":"protein localization to microtubule cytoskeleton abolished","type":"exact"}],"termid":"FYPO:0004091"}


id: SO:0000757
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA synthesized from RNA by reverse transcriptase, single stranded.","direct_ancestors":[{"relation_name":"is_a","term_name":"cDNA","termid":"SO:0000756"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single_stranded_cDNA","synonyms":[{"name":"single strand cDNA","type":"exact"},{"name":"single stranded cDNA","type":"exact"},{"name":"single-strand cDNA","type":"related"}],"termid":"SO:0000757"}


id: FYPO:0002108
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is viable, and tapers at one end to a diameter smaller than the other. The cell diameter at the narrow end is smaller than that of a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"tapered cell","termid":"FYPO:0000014"},{"relation_name":"has_part","term_name":"viable cell","termid":"FYPO:0000124"},{"relation_name":"is_a","term_name":"viable cell","termid":"FYPO:0000124"},{"relation_name":"is_a","term_name":"tapered vegetative cell","termid":"FYPO:0001119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000004","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"viable tapered cell","synonyms":[{"name":"viable bottle-shaped cell","type":"exact"},{"name":"viable bottle/skittle cell","type":"exact"},{"name":"viable skittle-shaped cell","type":"exact"}],"termid":"FYPO:0002108"}


id: MONDO:0008395
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extremely rare malformation syndrome, described in less than 10 patients to date, characterized by microcephaly with characteristic facies (downslanting parpebral fissures, microstomia, beaked nose, narrow maxilla), very short stature, narrow thoracic cage with pectus carinatum, hypoplastic genitalia and skeletal anomalies (i.e. characteristic brachydactyly and osteochondritis of the spine) as well as intellectual and developmental delay.","definition_xrefs":["Orphanet:3121"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ruvalcaba syndrome","secondary_identifiers":["OMIM:180870","GARD:4748","UMLS:C0265248","SCTID:3073006","MEDGEN:120520","MESH:C579395","ICD9:759.89"],"synonyms":[{"name":"Ruvalcaba syndrome","type":"exact"}],"termid":"MONDO:0008395","xrefs":{"Monarch":{"xref_id":"0008395"}}}


id: GO:0044040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, that involve more than one organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism carbohydrate metabolic process (obsolete GO:0044040)","synonyms":[{"name":"main pathways of carbohydrate metabolic process","type":"narrow"},{"name":"main pathways of carbohydrate metabolism","type":"narrow"},{"name":"multi-organism carbohydrate metabolism","type":"exact"}],"termid":"GO:0044040"}


id: MONDO:0019353
data:
  {"annotated_genes":["SJAG_02885","SJAG_01356"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87890,87889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010819"}]},"cv_name":"mondo","definition":"Stargardt disease, also known as Stargardt 1 (STGD1), is an autosomal recessive form of retinal dystrophy that is usually characterized by a progressive loss of central vision associated with irregular macular and perimacular yellow-white fundus flecks, and a so-called ''beaten bronze'' atrophic central macular lesion.","definition_xrefs":["Orphanet:827"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"age-related macular degeneration","termid":"MONDO:0005150"},{"relation_name":"is_a","term_name":"macular degeneration","termid":"MONDO:0003004"},{"relation_name":"is_a","term_name":"familial flecked retinopathy","termid":"MONDO:0016420"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01356":null,"SJAG_02885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Stargardt disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:181","UMLS:C0271093","NCIT:C85078","ICD10CM:H35.5","NANDO:1200933","DOID:0050817","MedDRA:10062766","MEDGEN:75734","MESH:D000080362","SCTID:47673003","icd11.foundation:1690038580"],"synonyms":[{"name":"Stargardt 1","type":"exact"},{"name":"Stargardt disease 1","type":"narrow"},{"name":"Stargardt macular dystrophy","type":"related"},{"name":"fundus flavimaculatus","type":"exact"},{"name":"juvenile onset macular degeneration","type":"related"}],"termid":"MONDO:0019353","terms_by_termid":{"MONDO:0010819":null},"xrefs":{"Monarch":{"xref_id":"0019353"}}}


id: PBO:0079329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 17A","termid":"PBO:0079329"}


id: GO:2000906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of starch metabolic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of starch metabolic process","termid":"GO:2000904"},{"relation_name":"positively_regulates","term_name":"starch metabolic process","termid":"GO:0005982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of starch metabolic process","synonyms":[{"name":"positive regulation of starch metabolism","type":"exact"}],"termid":"GO:2000906"}


id: GO:1904973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of viral translation.","definition_xrefs":["PMID:19666601","GO_REF:0000058","GOC:bhm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of viral process","termid":"GO:0048524"},{"relation_name":"is_a","term_name":"regulation of viral translation","termid":"GO:1904971"},{"relation_name":"positively_regulates","term_name":"viral translation","termid":"GO:0019081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of viral translation","synonyms":[{"name":"activation of viral protein anabolism","type":"narrow"},{"name":"activation of viral protein biosynthesis","type":"narrow"},{"name":"activation of viral protein biosynthetic process","type":"narrow"},{"name":"activation of viral protein formation","type":"narrow"},{"name":"activation of viral protein synthesis","type":"narrow"},{"name":"activation of viral translation","type":"narrow"},{"name":"positive regulation of viral protein anabolism","type":"exact"},{"name":"positive regulation of viral protein biosynthesis","type":"exact"},{"name":"positive regulation of viral protein biosynthetic process","type":"exact"},{"name":"positive regulation of viral protein formation","type":"exact"},{"name":"positive regulation of viral protein synthesis","type":"exact"},{"name":"up regulation of viral protein anabolism","type":"exact"},{"name":"up regulation of viral protein biosynthesis","type":"exact"},{"name":"up regulation of viral protein biosynthetic process","type":"exact"},{"name":"up regulation of viral protein formation","type":"exact"},{"name":"up regulation of viral protein synthesis","type":"exact"},{"name":"up regulation of viral translation","type":"exact"},{"name":"up-regulation of viral protein anabolism","type":"exact"},{"name":"up-regulation of viral protein biosynthesis","type":"exact"},{"name":"up-regulation of viral protein biosynthetic process","type":"exact"},{"name":"up-regulation of viral protein formation","type":"exact"},{"name":"up-regulation of viral protein synthesis","type":"exact"},{"name":"up-regulation of viral translation","type":"exact"},{"name":"upregulation of viral protein anabolism","type":"exact"},{"name":"upregulation of viral protein biosynthesis","type":"exact"},{"name":"upregulation of viral protein biosynthetic process","type":"exact"},{"name":"upregulation of viral protein formation","type":"exact"},{"name":"upregulation of viral protein synthesis","type":"exact"},{"name":"upregulation of viral translation","type":"exact"}],"termid":"GO:1904973"}


id: GO:0061057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of peptidoglycan to a receptor and ending with regulation of a downstream cellular process. The main outcome of the Imd signaling is the production of antimicrobial peptides.","definition_xrefs":["PMID:18688280","GOC:dph","PMID:24706930"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern recognition receptor signaling pathway","termid":"GO:0002221"},{"relation_name":"part_of","term_name":"defense response to bacterium","termid":"GO:0042742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"peptidoglycan recognition protein signaling pathway","synonyms":[{"name":"Imd signaling pathway","type":"exact"},{"name":"Imd signalling pathway","type":"exact"},{"name":"PGRP signaling pathway","type":"related"},{"name":"immune deficiency pathway","type":"related"},{"name":"immune deficiency signaling pathway","type":"related"}],"termid":"GO:0061057"}


id: PBO:0091868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Stb3","termid":"PBO:0091868"}


id: MONDO:0030332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary dyskinesia, primary, 46","secondary_identifiers":["MEDGEN:1780196","OMIM:619436","UMLS:C5543646"],"synonyms":[{"name":"CILD46","type":"exact"},{"name":"ciliary dyskinesia, primary, 46","type":"exact"}],"termid":"MONDO:0030332","xrefs":{"Monarch":{"xref_id":"0030332"}}}


id: PATO:0001020
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of whether the bearer has been harmed or injured or spoiled.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"damage","termid":"PATO:0001020"}


id: PBO:0088106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Uridylate kinase; catalyzes the seventh enzymatic step in the de novo biosynthesis of pyrimidines, converting uridine monophosphate (UMP) into uridine-5'-diphosphate (UDP)","termid":"PBO:0088106"}


id: PBO:0083957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDP-mannose pyrophosphorylase (mannose-1-phosphate guanyltransferase); synthesizes GDP-mannose from GTP and mannose-1-phosphate in cell wall biosynthesis; required for normal cell wall structure","termid":"PBO:0083957"}


id: PR:Q09179
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutamine synthetase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00645","PANTHER:PTHR20852:SF14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine synthetase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.06","secondary_identifiers":["UniProtKB:Q09179"],"synonyms":[{"name":"GS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GLUL","type":"exact"},{"name":"glutamate--ammonia ligase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09179"}


id: GO:0018887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 4-carboxy-4'-sulfoazobenzene, a sulfonated azo compound synthesized by nitro-amine condensation from sulfanilic acid and 4-nitrobenzoic acid.","definition_xrefs":["PMID:9603860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"4-carboxy-4'-sulfoazobenzene metabolic process","secondary_identifiers":["UM-BBD_pathwayID:csab"],"synonyms":[{"name":"4-carboxy-4'-sulfoazobenzene metabolism","type":"exact"},{"name":"4-carboxy-4'-sulphoazobenzene metabolic process","type":"exact"},{"name":"4-carboxy-4'-sulphoazobenzene metabolism","type":"exact"}],"termid":"GO:0018887"}


id: FYPO:0002939
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which an RNA catabolic process that degrades mRNA encoded in the nucleus is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0000956","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"},{"relation_name":"is_a","term_name":"normal RNA metabolic process","termid":"FYPO:0004850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal nuclear mRNA catabolic process","synonyms":[{"name":"normal nuclear mRNA breakdown","type":"exact"},{"name":"normal nuclear mRNA catabolic process during mitotic cell cycle","type":"related"},{"name":"normal nuclear mRNA catabolic process during vegetative growth","type":"exact"},{"name":"normal nuclear mRNA catabolism","type":"exact"},{"name":"normal nuclear mRNA degradation","type":"exact"},{"name":"normal nuclear-transcribed mRNA catabolic process","type":"exact"}],"termid":"FYPO:0002939"}


id: PR:P40923
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- yox1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBF complex negative regulatory component yox1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21B10.13c","synonyms":[{"name":"Spom972h-yox1","type":"exact"}],"termid":"PR:P40923"}


id: GO:0071410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cyclopentenone stimulus. Cyclopentenones are oxylipins derived from polyunsaturated fatty acids. They are structurally similar to jasmonic acid, but contain a reactive unsaturated carbonyl structure in the cyclo-ring. Cyclopentenones include phytoprostanes and 12-oxo-phytodienoic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cyclopentenone","termid":"GO:0010583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cyclopentenone","termid":"GO:0071410"}


id: PBO:0059724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 32","termid":"PBO:0059724"}


id: GO:1905515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a non-motile cilium.","definition_xrefs":["PMID:14521834","GO_REF:0000079","GOC:cilia","PMID:14521833","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium assembly","termid":"GO:0060271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"non-motile cilium assembly","secondary_identifiers":["GO:0035058"],"synonyms":[{"name":"immotile primary cilium assembly","type":"related"},{"name":"non-motile cilium formation","type":"exact"},{"name":"nonmotile cilium assembly","type":"exact"},{"name":"nonmotile cilium formation","type":"exact"},{"name":"nonmotile primary cilia assembly","type":"related"},{"name":"nonmotile primary cilium assembly","type":"related"},{"name":"sensory cilium assembly","type":"related"},{"name":"sensory cilium biogenesis","type":"related"}],"termid":"GO:1905515"}


id: FYPO:0006486
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-3,4,5-trisphosphate measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular phosphoinositide level","termid":"FYPO:0005588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular phosphatidylinositol-3,4,5-trisphosphate level","synonyms":[{"name":"decreased cellular 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate level","type":"exact"},{"name":"decreased cellular PI(3,4,5)P3 level","type":"exact"},{"name":"decreased cellular phosphatidylinositol-3,4,5-trisphosphate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular phosphatidylinositol-3,4,5-trisphosphate level during vegetative growth","type":"exact"},{"name":"reduced cellular phosphatidylinositol-3,4,5-trisphosphate level","type":"exact"}],"termid":"FYPO:0006486"}


id: PBO:0078262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 1-1","termid":"PBO:0078262"}


id: PBO:0053852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1121","termid":"PBO:0053852"}


id: PBO:0076947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TDP-glucose 4,6-dehydratase","termid":"PBO:0076947"}


id: GO:0005761
data:
  {"annotated_genes":["SJAG_02452","SJAG_04689","SJAG_00086","SJAG_02067","SJAG_04173","SJAG_03297","SJAG_04244","SJAG_06110","SJAG_01473","SJAG_03402","SJAG_02643","SJAG_01045","SJAG_05573","SJAG_04378","SJAG_00105","SJAG_02836","SJAG_01303","SJAG_02777","SJAG_01719","SJAG_01520","SJAG_00844","SJAG_01829","SJAG_05244","SJAG_01413","SJAG_01591","SJAG_04493","SJAG_04753","SJAG_01630","SJAG_03284","SJAG_01727","SJAG_04216","SJAG_02359","SJAG_03065","SJAG_04281","SJAG_02071","SJAG_03040","SJAG_03636","SJAG_01463","SJAG_00799","SJAG_04494","SJAG_01734","SJAG_00497","SJAG_04893","SJAG_07009","SJAG_02324","SJAG_03649","SJAG_02762","SJAG_05270","SJAG_04889","SJAG_04164","SJAG_00060","SJAG_00077","SJAG_03459","SJAG_00513","SJAG_00628","SJAG_00860","SJAG_03192","SJAG_05320","SJAG_04788","SJAG_04918","SJAG_03053","SJAG_01767","SJAG_02201","SJAG_00148","SJAG_00315","SJAG_01478","SJAG_00782","SJAG_04019","SJAG_04207","SJAG_03176","SJAG_03584","SJAG_01468","SJAG_00889","SJAG_05218","SJAG_06253","SJAG_04490","SJAG_00944"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[109916,73885,79864,81469,79892,110015,112953,99793,105501,99772,81152,76560,79632,110065,112624,114579,77128,73557,116450,80175,115305,77355,98408,108588,78359,111686,114078,68362,74208,71366,72504,74803,79039,72944,74542,82179,116568,118012,118121,107532,119779,80992,78388,81602],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005762"},{"annotations":[99797,91745,114214,104130,74337,96000,119947,80093,107863,110424,75855,97740,74105,77468,96302,112512,91771,93894,74969,70895,117872,112230,111978,99796,108228,117452,75903,98440,78298,105822,110180,104901,109920],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005763"}]},"cv_name":"cellular_component","definition":"A ribosome found in the mitochondrion of a eukaryotic cell; contains a characteristic set of proteins distinct from those of cytosolic ribosomes.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organellar ribosome","termid":"GO:0000313"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":77,"genes_by_uniquename":{"SJAG_00060":null,"SJAG_00077":null,"SJAG_00086":null,"SJAG_00105":null,"SJAG_00148":null,"SJAG_00315":null,"SJAG_00497":null,"SJAG_00513":null,"SJAG_00628":null,"SJAG_00782":null,"SJAG_00799":null,"SJAG_00844":null,"SJAG_00860":null,"SJAG_00889":null,"SJAG_00944":null,"SJAG_01045":null,"SJAG_01303":null,"SJAG_01413":null,"SJAG_01463":null,"SJAG_01468":null,"SJAG_01473":null,"SJAG_01478":null,"SJAG_01520":null,"SJAG_01591":null,"SJAG_01630":null,"SJAG_01719":null,"SJAG_01727":null,"SJAG_01734":null,"SJAG_01767":null,"SJAG_01829":null,"SJAG_02067":null,"SJAG_02071":null,"SJAG_02201":null,"SJAG_02324":null,"SJAG_02359":null,"SJAG_02452":null,"SJAG_02643":null,"SJAG_02762":null,"SJAG_02777":null,"SJAG_02836":null,"SJAG_03040":null,"SJAG_03053":null,"SJAG_03065":null,"SJAG_03176":null,"SJAG_03192":null,"SJAG_03284":null,"SJAG_03297":null,"SJAG_03402":null,"SJAG_03459":null,"SJAG_03584":null,"SJAG_03636":null,"SJAG_03649":null,"SJAG_04019":null,"SJAG_04164":null,"SJAG_04173":null,"SJAG_04207":null,"SJAG_04216":null,"SJAG_04244":null,"SJAG_04281":null,"SJAG_04378":null,"SJAG_04490":null,"SJAG_04493":null,"SJAG_04494":null,"SJAG_04689":null,"SJAG_04753":null,"SJAG_04788":null,"SJAG_04889":null,"SJAG_04893":null,"SJAG_04918":null,"SJAG_05218":null,"SJAG_05244":null,"SJAG_05270":null,"SJAG_05320":null,"SJAG_05573":null,"SJAG_06110":null,"SJAG_06253":null,"SJAG_07009":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005739","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"mitochondrial ribosome","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"55S ribosome, mitochondrial","type":"narrow"}],"termid":"GO:0005761","terms_by_termid":{"GO:0005762":null,"GO:0005763":null}}


id: PBO:0040335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP5MC2 pseudogene 1","termid":"PBO:0040335"}


id: GO:0046719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any virus-mediated process that modulates the levels of viral proteins in a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral process","termid":"GO:0050792"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation by virus of viral protein levels in host cell","synonyms":[{"name":"regulation of viral protein levels","type":"exact"}],"termid":"GO:0046719"}


id: GO:0006286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Excision of the sugar phosphate residue at an AP site, i.e. a deoxyribose sugar with a missing base, by a phosphodiesterase enzyme.","definition_xrefs":["ISBN:0815316194"],"gene_count":0,"genotype_count":0,"name":"obsolete base-excision repair, base-free sugar-phosphate removal (obsolete GO:0006286)","termid":"GO:0006286"}


id: PBO:0074428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 28","termid":"PBO:0074428"}


id: PBO:0116478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRR/PPR or ankyrin containing protein","termid":"PBO:0116478"}


id: PBO:0053222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat LGI family member 2","termid":"PBO:0053222"}


id: MONDO:0016914
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 16","termid":"MONDO:0016878"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of the long arm of chromosome 16","secondary_identifiers":["GARD:20835","icd11.foundation:324314539","UMLS:C4736186","MEDGEN:1790033","Orphanet:262128"],"synonyms":[{"name":"partial deletion of chromosome 16q","type":"exact"},{"name":"partial deletion of the long arm of chromosome type 16","type":"exact"},{"name":"partial monosomy of chromosome 16q","type":"exact"},{"name":"partial monosomy of the long arm of chromosome 16","type":"exact"}],"termid":"MONDO:0016914","xrefs":{"Monarch":{"xref_id":"0016914"}}}


id: GO:0002519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction of natural killer cells.","definition_xrefs":["PMID:16546094","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tolerance induction","termid":"GO:0002507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"natural killer cell tolerance induction","synonyms":[{"name":"NK cell tolerance induction","type":"exact"}],"termid":"GO:0002519"}


id: PBO:0060432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NACA family member 3, pseudogene","termid":"PBO:0060432"}


id: PBO:0091385
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAs-Like","termid":"PBO:0091385"}


id: GO:0010991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate, frequency, or extent of SMAD protein complex assembly. SMAD protein complex assembly is the aggregation, arrangement and bonding together of a set of components to form a protein complex that contains SMAD proteins.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of SMAD protein complex assembly (obsolete GO:0010991)","termid":"GO:0010991"}


id: MONDO:1011550
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Legg-Calvé-Perthes disease that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrosis, dog","termid":"MONDO:1011171"},{"relation_name":"is_a","term_name":"Legg-Calvé-Perthes disease, non-human animal","termid":"MONDO:1011453"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Legg-Calvé-Perthes disease, dog","secondary_identifiers":["OMIA:000586-9615"],"termid":"MONDO:1011550","xrefs":{"Monarch":{"xref_id":"1011550"}}}


id: SO:0002034
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A snoRNA primary transcript that also encodes pre-miR sequence that is processed to form functionally active miRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"pre_miRNA","termid":"SO:0001244"},{"relation_name":"is_a","term_name":"snoRNA_primary_transcript","termid":"SO:0000232"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miR_encoding_snoRNA_primary_transcript","synonyms":[{"name":"miR encoding snoRNA primary transcript","type":"exact"}],"termid":"SO:0002034"}


id: PBO:0090604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wybutosine biosynthesis protein Tyw1","termid":"PBO:0090604"}


id: PBO:0116996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GZMH and GMZB antisense RNA 1","termid":"PBO:0116996"}


id: GO:0102449
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: kaempferol + S-adenosyl-L-methionine = 3-O-methylkaempferol + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:74743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"kaempferol 3-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13935"],"termid":"GO:0102449"}


id: GO:0002781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis or release of an antifungal peptide during an immune response, resulting in an increase in intracellular or extracellular levels.","definition_xrefs":["PMID:11807545","PMID:15638771","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antimicrobial peptide production","termid":"GO:0002775"},{"relation_name":"part_of","term_name":"antifungal humoral response","termid":"GO:0019732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"antifungal peptide production","termid":"GO:0002781"}


id: GO:0008085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete phototransduction, visible light, light adaptation (obsolete GO:0008085)","synonyms":[{"name":"phototransduction, visible light, light adaptation","type":"exact"}],"termid":"GO:0008085"}


id: PBO:0108602
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-device_utilizes_material","termid":"PBO:0108602"}


id: GO:0001578
data:
  {"annotated_genes":["SJAG_04566","SJAG_01546","SJAG_04841","SJAG_03073","SJAG_02624","SJAG_01613","SJAG_03264"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98583,99091,101038,103258,114624,114634,120016],"is_not":false,"summary":null,"term":"GO:0001578"}]},"cv_name":"biological_process","definition":"A process that results in a parallel arrangement of microtubules.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01546":null,"SJAG_01613":null,"SJAG_02624":null,"SJAG_03073":null,"SJAG_03264":null,"SJAG_04566":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"microtubule bundle formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"microtubule bundling","type":"exact"}],"termid":"GO:0001578","terms_by_termid":{"GO:0001578":null}}


id: PATO:0000983
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A permeability quality inhering in a bearer by virtue of the bearer's being incapable of being permeated or pervaded by a liquid (as by osmosis or diffusion).","definition_xrefs":["Biology-online:Biology-online"],"direct_ancestors":[{"relation_name":"is_a","term_name":"permeability","termid":"PATO:0000970"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"impermeable","termid":"PATO:0000983"}


id: PBO:0002658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNP complex (predicted)","termid":"PBO:0002658"}


id: MONDO:0014806
data:
  {"annotated_genes":["SJAG_02096"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87591],"is_not":false,"summary":null,"term":"MONDO:0014806"}]},"cv_name":"mondo","definition":"Any prenatal-onset spinal muscular atrophy with congenital bone fractures in which the cause of the disease is a mutation in the TRIP4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenatal-onset spinal muscular atrophy with congenital bone fractures","termid":"MONDO:0000209"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002320"],"is_obsolete":false,"name":"spinal muscular atrophy with congenital bone fractures 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:271225","OMIM:616866","UMLS:C4225177","GARD:4947","MESH:C564805","MEDGEN:896011"],"synonyms":[{"name":"SMA1 with congenital bone fractures","type":"related"},{"name":"SMABF1","type":"exact"},{"name":"TRIP4 prenatal-onset spinal muscular atrophy with congenital bone fractures","type":"exact"},{"name":"prenatal-onset spinal muscular atrophy with congenital bone fractures caused by mutation in TRIP4","type":"exact"},{"name":"spinal muscular atrophy type 1 with congenital bone fractures","type":"related"},{"name":"spinal muscular atrophy with congenital bone fractures 1","type":"exact"},{"name":"spinal muscular atrophy with congenital bone fractures type 1","type":"exact"},{"name":"spinal muscular atrophy, type I, with congenital bone fractures","type":"exact"}],"termid":"MONDO:0014806","terms_by_termid":{"MONDO:0014806":null},"xrefs":{"Monarch":{"xref_id":"0014806"}}}


id: GO:0047941
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-gulono-1,4-lactone + NADP+ = D-glucurono-3,6-lactone + H+ + NADPH.","definition_xrefs":["RHEA:18925","EC:1.1.1.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"glucuronolactone reductase activity","secondary_identifiers":["MetaCyc:GLUCURONOLACTONE-REDUCTASE-RXN","KEGG_REACTION:R03183"],"termid":"GO:0047941"}


id: GO:0019770
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an immunoglobulin of an IgG isotype via the Fc region, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:add","GOC:signaling","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin receptor activity","termid":"GO:0019763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"IgG receptor activity","termid":"GO:0019770"}


id: MONDO:0001929
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute infection of the bile ducts caused by bacteria ascending from the small intestine.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholangitis","termid":"MONDO:0004789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"ascending cholangitis","secondary_identifiers":["DOID:14270","MEDGEN:81387","NCIT:C35372","SCTID:26918003","UMLS:C0311273"],"synonyms":[{"name":"ascending cholangitis","type":"exact"}],"termid":"MONDO:0001929","xrefs":{"Monarch":{"xref_id":"0001929"}}}


id: PBO:0072225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20","termid":"PBO:0072225"}


id: PBO:0034162
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_parasitism","termid":"PBO:0034162"}


id: PBO:0080148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VAV3 antisense RNA 1","termid":"PBO:0080148"}


id: GO:0042989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The selective interaction of actin monomers with specific molecules that inhibit their polymerization by preventing their access to other monomers.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete sequestering of actin monomers (obsolete GO:0042989)","synonyms":[{"name":"actin monomer retention","type":"exact"},{"name":"actin monomer sequestering","type":"exact"},{"name":"actin monomer sequestration","type":"exact"},{"name":"actin monomer storage","type":"exact"},{"name":"retention of actin monomers","type":"exact"},{"name":"sequestration of actin monomers","type":"exact"},{"name":"storage of actin monomers","type":"exact"}],"termid":"GO:0042989"}


id: PBO:0034363
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-contributes_to_severity_of_condition","termid":"PBO:0034363"}


id: GO:0035917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents or reduces the frequency, rate or extent of the activity of a calcium channel in another organism.","definition_xrefs":["GOC:bf","GOC:fj","PMID:20920515"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of calcium channel activity in another organism (obsolete GO:0035917)","synonyms":[{"name":"down-regulation of calcium channel activity in other organism","type":"exact"},{"name":"downregulation of calcium channel activity in other organism","type":"exact"},{"name":"inhibition of calcium channel activity in other organism","type":"narrow"},{"name":"negative regulation of calcium channel activity in other organism","type":"exact"}],"termid":"GO:0035917"}


id: PBO:0083324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF SGE1/YPR198W","termid":"PBO:0083324"}


id: FYPO:0005967
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of potassium ions into a cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal potassium import","termid":"FYPO:0005966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased potassium import","synonyms":[{"name":"decreased cellular potassium import","type":"exact"},{"name":"decreased potassium import across plasma membrane","type":"exact"},{"name":"decreased potassium import during mitotic cell cycle","type":"related"},{"name":"decreased potassium import during vegetative growth","type":"exact"},{"name":"decreased potassium import into cell","type":"exact"},{"name":"decreased potassium ion import","type":"exact"},{"name":"reduced potassium import","type":"exact"}],"termid":"FYPO:0005967"}


id: PBO:0064139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase, membrane associated tyrosine/threonine 1","termid":"PBO:0064139"}


id: FYECO:0000255
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Arginine was completely excluded from the experimental medium/buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping absent","termid":"FYECO:0000120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine absent","termid":"FYECO:0000255"}


id: GO:0008582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synaptic assembly at neuromuscular junctions.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"is_a","term_name":"regulation of synapse assembly","termid":"GO:0051963"},{"relation_name":"is_a","term_name":"regulation of neuromuscular junction development","termid":"GO:1904396"},{"relation_name":"regulates","term_name":"synaptic assembly at neuromuscular junction","termid":"GO:0051124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of synaptic assembly at neuromuscular junction","synonyms":[{"name":"regulation of synaptic growth at neuromuscular junction","type":"related"}],"termid":"GO:0008582"}


id: GO:0019717
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete synaptosome (obsolete GO:0019717)","secondary_identifiers":["Wikipedia:Synaptosome"],"synonyms":[{"name":"synaptosome","type":"exact"}],"termid":"GO:0019717"}


id: PBO:0056800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase","termid":"PBO:0056800"}


id: PBO:0088573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex cyclin subunit Srb11","termid":"PBO:0088573"}


id: GO:0033386
data:
  {"annotated_genes":["SJAG_03352","SJAG_00580"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101411,111328],"is_not":false,"summary":null,"term":"GO:0033386"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of geranylgeranyl diphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"},{"relation_name":"is_a","term_name":"geranylgeranyl diphosphate metabolic process","termid":"GO:0033385"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00580":null,"SJAG_03352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"geranylgeranyl diphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"geranylgeranyl diphosphate anabolism","type":"exact"},{"name":"geranylgeranyl diphosphate biosynthesis","type":"exact"},{"name":"geranylgeranyl diphosphate formation","type":"exact"},{"name":"geranylgeranyl diphosphate synthesis","type":"exact"}],"termid":"GO:0033386","terms_by_termid":{"GO:0033386":null}}


id: GO:0045171
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A direct connection between the cytoplasm of two cells that is formed following the completion of cleavage furrow ingression during cell division. They are usually present only briefly prior to completion of cytokinesis. However, in some cases, such as the bridges between germ cells during their development, they become stabilised.","definition_xrefs":["PMID:9635420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"intercellular bridge","termid":"GO:0045171"}


id: GO:0103007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-acetate + S-adenosyl-L-methionine = methyl (indol-3-yl)acetate + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.278","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"indole-3-acetate carboxyl methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-9825","RHEA:36131"],"termid":"GO:0103007"}


id: PBO:0067635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 808, pseudogene","termid":"PBO:0067635"}


id: FYPO:0000253
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of hydroxymethylglutaryl-CoA reductase (NADPH) activity is increased.","definition_xrefs":["PMID:19041767","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"increased HMG-CoA reductase activity","termid":"FYPO:0000253"}


id: GO:0018179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The desulfurization of peptidyl-L-cysteine to yield L-alanine and elemental sulfur; peptidyl-L-cysteine persulfide is an intermediate.","definition_xrefs":["RESID:AA0269"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-cysteine desulfurization (obsolete GO:0018179)","synonyms":[{"name":"peptidyl-cysteine desulfurization","type":"exact"},{"name":"peptidyl-cysteine desulphurization","type":"exact"}],"termid":"GO:0018179"}


id: PBO:0068866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 106, pseudogene","termid":"PBO:0068866"}


id: PBO:0080250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 13 pseudogene","termid":"PBO:0080250"}


id: PBO:0082762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the small subunit processome; involved in 40S ribosomal subunit biogenesis; interacts with snR30 and is required for dissociation of snR30 from large pre-ribosomal particles; has homology to PINc domain protein Fcf1p, although the PINc domain of Utp23p is not required for function; essential protein","termid":"PBO:0082762"}


id: MONDO:0002062
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A myofibroblastoma occurring in the breast of both women and men. It presents as a slowly growing mass.","definition_xrefs":["NCIT:C40397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast benign neoplasm","termid":"MONDO:0000620"},{"relation_name":"is_a","term_name":"myofibroblastoma","termid":"MONDO:0040675"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast myofibroblastoma","secondary_identifiers":["DOID:1629","MEDGEN:307311","UMLS:C1511320"],"synonyms":[{"name":"breast myofibroblastoma","type":"exact"}],"termid":"MONDO:0002062","xrefs":{"Monarch":{"xref_id":"0002062"}}}


id: MONDO:0007408
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptotia, familial","secondary_identifiers":["MEDGEN:342243","UMLS:C1852455","OMIM:123557","MESH:C565140"],"synonyms":[{"name":"cryptotia, familial","type":"exact"}],"termid":"MONDO:0007408","xrefs":{"Monarch":{"xref_id":"0007408"}}}


id: PBO:0059954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 40","termid":"PBO:0059954"}


id: GO:0060223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a retinal rod cell. A retinal rod cell is one of the two photoreceptor subtypes in a camera-type eye.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"camera-type eye photoreceptor cell fate commitment","termid":"GO:0060220"},{"relation_name":"part_of","term_name":"retinal rod cell differentiation","termid":"GO:0060221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal rod cell fate commitment","termid":"GO:0060223"}


id: PBO:0012299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human LYAR homolog","termid":"PBO:0012299"}


id: _global:has_divisor_quality
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"has_ratio_quality","termid":"_global:has_ratio_quality"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_divisor_quality","termid":"_global:has_divisor_quality"}


id: PBO:0086914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative zinc cluster protein of unknown function; proposed to be involved in the regulation of energy metabolism, based on patterns of expression and sequence analysis","termid":"PBO:0086914"}


id: PBO:0062103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 1 pseudogene","termid":"PBO:0062103"}


id: GO:1903955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein targeting to mitochondrion.","definition_xrefs":["PMID:24270810","GOC:TermGenie","GO_REF:0000058","GOC:PARL","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein targeting to mitochondrion","termid":"GO:1903214"},{"relation_name":"is_a","term_name":"positive regulation of establishment of protein localization to mitochondrion","termid":"GO:1903749"},{"relation_name":"positively_regulates","term_name":"protein targeting to mitochondrion","termid":"GO:0006626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006605"}],"interesting_parent_ids":["GO:0006605","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein targeting to mitochondrion","synonyms":[{"name":"activation of mitochondrial protein import","type":"related"},{"name":"activation of mitochondrial translocation","type":"related"},{"name":"activation of protein import into mitochondrion","type":"narrow"},{"name":"activation of protein targeting to mitochondria","type":"narrow"},{"name":"activation of protein targeting to mitochondrion","type":"narrow"},{"name":"activation of protein-mitochondrial targeting","type":"narrow"},{"name":"positive regulation of mitochondrial protein import","type":"related"},{"name":"positive regulation of mitochondrial translocation","type":"related"},{"name":"positive regulation of protein import into mitochondrion","type":"exact"},{"name":"positive regulation of protein targeting to mitochondria","type":"exact"},{"name":"positive regulation of protein-mitochondrial targeting","type":"exact"},{"name":"up regulation of mitochondrial protein import","type":"related"},{"name":"up regulation of mitochondrial translocation","type":"related"},{"name":"up regulation of protein import into mitochondrion","type":"exact"},{"name":"up regulation of protein targeting to mitochondria","type":"exact"},{"name":"up regulation of protein targeting to mitochondrion","type":"exact"},{"name":"up regulation of protein-mitochondrial targeting","type":"exact"},{"name":"up-regulation of mitochondrial protein import","type":"related"},{"name":"up-regulation of mitochondrial translocation","type":"related"},{"name":"up-regulation of protein import into mitochondrion","type":"exact"},{"name":"up-regulation of protein targeting to mitochondria","type":"exact"},{"name":"up-regulation of protein targeting to mitochondrion","type":"exact"},{"name":"up-regulation of protein-mitochondrial targeting","type":"exact"},{"name":"upregulation of mitochondrial protein import","type":"related"},{"name":"upregulation of mitochondrial translocation","type":"related"},{"name":"upregulation of protein import into mitochondrion","type":"exact"},{"name":"upregulation of protein targeting to mitochondria","type":"exact"},{"name":"upregulation of protein targeting to mitochondrion","type":"exact"},{"name":"upregulation of protein-mitochondrial targeting","type":"exact"}],"termid":"GO:1903955"}


id: MONDO:0002426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal neoplasm that arises from the lung. Representative examples include Kaposi sarcoma, leiomyosarcoma, and synovial sarcoma.","definition_xrefs":["NCIT:C4860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung cancer","termid":"MONDO:0008903"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung sarcoma","secondary_identifiers":["DOID:2784","MEDGEN:109336","UMLS:C0598790"],"synonyms":[{"name":"lung sarcoma","type":"exact"},{"name":"pulmonary sarcoma","type":"exact"},{"name":"sarcoma of lung","type":"exact"},{"name":"sarcoma of the lung","type":"exact"}],"termid":"MONDO:0002426","xrefs":{"Monarch":{"xref_id":"0002426"}}}


id: _global:singly_occurring_form_of
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"singly_occurring_form_of","synonyms":[{"name":"monadic_form_of","type":"exact"}],"termid":"_global:singly_occurring_form_of"}


id: PBO:0070778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 8","termid":"PBO:0070778"}


id: FYPO:0000827
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which one or more cell cycle phase transitions begins earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle","termid":"FYPO:0000011"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"premature cell cycle phase transition","synonyms":[{"name":"advanced cell cycle phase transition","type":"exact"},{"name":"premature cell cycle phase transition during mitotic cell cycle","type":"related"},{"name":"premature cell cycle phase transition during vegetative growth","type":"exact"},{"name":"premature cell cycle progression","type":"exact"},{"name":"premature cell cycle progression during vegetative growth","type":"exact"}],"termid":"FYPO:0000827"}


id: MONDO:0800384
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A heavy metal poisoning that is caused by exposure to cesium.","definition_xrefs":["MONDO:patterns/patterns/poisoning"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heavy metal poisoning","termid":"MONDO:0023305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cesium poisoning","termid":"MONDO:0800384","xrefs":{"Monarch":{"xref_id":"0800384"}}}


id: PBO:0064113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystin 1 like 3, transient receptor potential channel interacting","termid":"PBO:0064113"}


id: PBO:0074391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 2","termid":"PBO:0074391"}


id: GO:0015193
data:
  {"annotated_genes":["SJAG_04718"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102171],"is_not":false,"summary":null,"term":"GO:0015193"}]},"cv_name":"molecular_function","definition":"Enables the transfer of L-proline from one side of a membrane to the other. L-proline is pyrrolidine-2-carboxylic acid.","definition_xrefs":["ISBN:0815340729","GOC:ai","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04718":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"L-proline transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0005296","Reactome:R-HSA-8870354"],"synonyms":[{"name":"L-proline permease activity","type":"related"},{"name":"L-proline transporter activity","type":"broad"},{"name":"glycine betaine/proline porter activity","type":"narrow"},{"name":"proline/glycine/betaine:hydrogen/sodium symporter activity","type":"narrow"}],"termid":"GO:0015193","terms_by_termid":{"GO:0015193":null}}


id: PBO:0071120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 122","termid":"PBO:0071120"}


id: GO:1900261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of RNA-directed 5'-3' RNA polymerase activity.","definition_xrefs":["GOC:TermGenie","GOC:pf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of RNA-dependent RNA polymerase activity (obsolete GO:1900261)","synonyms":[{"name":"activation of 3D polymerase activity","type":"exact"},{"name":"activation of PB1 proteins","type":"related"},{"name":"activation of PB2 proteins","type":"related"},{"name":"activation of RDRP","type":"related"},{"name":"activation of RNA nucleotidyltransferase (RNA-directed) activity","type":"exact"},{"name":"activation of RNA replicase activity","type":"exact"},{"name":"activation of RNA synthetase activity","type":"related"},{"name":"activation of RNA-dependent RNA polymerase activity","type":"exact"},{"name":"activation of RNA-dependent RNA replicase activity","type":"exact"},{"name":"activation of RNA-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"activation of RNA-directed RNA polymerase activity","type":"narrow"},{"name":"activation of nucleoside-triphosphate:RNA nucleotidyltransferase (RNA-directed)","type":"exact"},{"name":"activation of phage f2 replicase","type":"narrow"},{"name":"activation of polymerase L","type":"related"},{"name":"activation of ribonucleic acid replicase activity","type":"exact"},{"name":"activation of ribonucleic acid-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"activation of ribonucleic acid-dependent ribonucleic acid polymerase activity","type":"exact"},{"name":"activation of ribonucleic replicase activity","type":"exact"},{"name":"activation of ribonucleic synthetase activity","type":"related"},{"name":"activation of transcriptase","type":"broad"},{"name":"positive regulation of 3D polymerase activity","type":"exact"},{"name":"positive regulation of PB1 proteins","type":"related"},{"name":"positive regulation of PB2 proteins","type":"related"},{"name":"positive regulation of RDRP","type":"related"},{"name":"positive regulation of RNA nucleotidyltransferase (RNA-directed) activity","type":"exact"},{"name":"positive regulation of RNA replicase activity","type":"exact"},{"name":"positive regulation of RNA synthetase activity","type":"related"},{"name":"positive regulation of RNA-dependent RNA replicase activity","type":"exact"},{"name":"positive regulation of RNA-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"positive regulation of RNA-directed 5'-3' RNA polymerase activity","type":"exact"},{"name":"positive regulation of RNA-directed RNA polymerase activity","type":"broad"},{"name":"positive regulation of nucleoside-triphosphate:RNA nucleotidyltransferase (RNA-directed)","type":"exact"},{"name":"positive regulation of phage f2 replicase","type":"narrow"},{"name":"positive regulation of polymerase L","type":"related"},{"name":"positive regulation of ribonucleic acid replicase activity","type":"exact"},{"name":"positive regulation of ribonucleic acid-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"positive regulation of ribonucleic acid-dependent ribonucleic acid polymerase activity","type":"exact"},{"name":"positive regulation of ribonucleic replicase activity","type":"exact"},{"name":"positive regulation of ribonucleic synthetase activity","type":"related"},{"name":"positive regulation of transcriptase","type":"broad"},{"name":"up regulation of 3D polymerase activity","type":"exact"},{"name":"up regulation of PB1 proteins","type":"related"},{"name":"up regulation of PB2 proteins","type":"related"},{"name":"up regulation of Q-beta replicase activity","type":"exact"},{"name":"up regulation of RDRP","type":"related"},{"name":"up regulation of RNA nucleotidyltransferase (RNA-directed) activity","type":"exact"},{"name":"up regulation of RNA replicase activity","type":"exact"},{"name":"up regulation of RNA synthetase activity","type":"related"},{"name":"up regulation of RNA-dependent RNA polymerase activity","type":"exact"},{"name":"up regulation of RNA-dependent RNA replicase activity","type":"exact"},{"name":"up regulation of RNA-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"up regulation of RNA-directed RNA polymerase activity","type":"exact"},{"name":"up regulation of nucleoside-triphosphate:RNA nucleotidyltransferase (RNA-directed)","type":"exact"},{"name":"up regulation of phage f2 replicase","type":"narrow"},{"name":"up regulation of polymerase L","type":"related"},{"name":"up regulation of ribonucleic acid replicase activity","type":"exact"},{"name":"up regulation of ribonucleic acid-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"up regulation of ribonucleic acid-dependent ribonucleic acid polymerase activity","type":"exact"},{"name":"up regulation of ribonucleic replicase activity","type":"exact"},{"name":"up regulation of ribonucleic synthetase activity","type":"related"},{"name":"up regulation of transcriptase","type":"broad"},{"name":"up-regulation of 3D polymerase activity","type":"exact"},{"name":"up-regulation of PB1 proteins","type":"related"},{"name":"up-regulation of PB2 proteins","type":"related"},{"name":"up-regulation of Q-beta replicase activity","type":"exact"},{"name":"up-regulation of RDRP","type":"related"},{"name":"up-regulation of RNA nucleotidyltransferase (RNA-directed) activity","type":"exact"},{"name":"up-regulation of RNA replicase activity","type":"exact"},{"name":"up-regulation of RNA synthetase activity","type":"related"},{"name":"up-regulation of RNA-dependent RNA polymerase activity","type":"exact"},{"name":"up-regulation of RNA-dependent RNA replicase activity","type":"exact"},{"name":"up-regulation of RNA-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"up-regulation of RNA-directed RNA polymerase activity","type":"exact"},{"name":"up-regulation of nucleoside-triphosphate:RNA nucleotidyltransferase (RNA-directed)","type":"exact"},{"name":"up-regulation of phage f2 replicase","type":"narrow"},{"name":"up-regulation of polymerase L","type":"related"},{"name":"up-regulation of ribonucleic acid replicase activity","type":"exact"},{"name":"up-regulation of ribonucleic acid-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"up-regulation of ribonucleic acid-dependent ribonucleic acid polymerase activity","type":"exact"},{"name":"up-regulation of ribonucleic replicase activity","type":"exact"},{"name":"up-regulation of ribonucleic synthetase activity","type":"related"},{"name":"up-regulation of transcriptase","type":"broad"},{"name":"upregulation of 3D polymerase activity","type":"exact"},{"name":"upregulation of PB1 proteins","type":"related"},{"name":"upregulation of PB2 proteins","type":"related"},{"name":"upregulation of Q-beta replicase activity","type":"exact"},{"name":"upregulation of RDRP","type":"related"},{"name":"upregulation of RNA nucleotidyltransferase (RNA-directed) activity","type":"exact"},{"name":"upregulation of RNA replicase activity","type":"exact"},{"name":"upregulation of RNA synthetase activity","type":"related"},{"name":"upregulation of RNA-dependent RNA polymerase activity","type":"exact"},{"name":"upregulation of RNA-dependent RNA replicase activity","type":"exact"},{"name":"upregulation of RNA-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"upregulation of RNA-directed RNA polymerase activity","type":"exact"},{"name":"upregulation of nucleoside-triphosphate:RNA nucleotidyltransferase (RNA-directed)","type":"exact"},{"name":"upregulation of phage f2 replicase","type":"narrow"},{"name":"upregulation of polymerase L","type":"related"},{"name":"upregulation of ribonucleic acid replicase activity","type":"exact"},{"name":"upregulation of ribonucleic acid-dependent ribonucleate nucleotidyltransferase activity","type":"exact"},{"name":"upregulation of ribonucleic acid-dependent ribonucleic acid polymerase activity","type":"exact"},{"name":"upregulation of ribonucleic replicase activity","type":"exact"},{"name":"upregulation of ribonucleic synthetase activity","type":"related"},{"name":"upregulation of transcriptase","type":"broad"}],"termid":"GO:1900261"}


id: PBO:0043365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clathrin heavy chain","termid":"PBO:0043365"}


id: PBO:0086999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rhodanese domain sulfur transferase; accepts persulfite from Nfs1p and transfers it to Uba4p in the pathway for 2-thiolation of the wobble uridine base of tRNAs; also stimulates sulfur transfer by Nfs1p; involved in metabolism of sterol esters; may be mitochondrially localized","termid":"PBO:0086999"}


id: SO:0000953
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An origin of bacterial chromosome replication.","definition_xrefs":["SO:as"],"direct_ancestors":[{"relation_name":"is_a","term_name":"origin_of_replication","termid":"SO:0000296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oriC","synonyms":[{"name":"origin of bacterial chromosome replication","type":"exact"}],"termid":"SO:0000953"}


id: MOD:00075
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to N,N-dimethyl-L-proline.","definition_xrefs":["ChEBI:21451","PubMed:14570711","PubMed:6254758","RESID:AA0066","PubMed:3882426","Unimod:529","PubMed:193025","PubMed:12964758"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protonated-dimethylated residue","termid":"MOD:00710"},{"relation_name":"is_a","term_name":"N-methylated proline","termid":"MOD:01462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N-dimethyl-L-proline","synonyms":[{"name":"(2S)-2-carboxy-1,1-dimethylpyrrolidinium","type":"exact"},{"name":"1,1-dimethyl-L-prolinium","type":"exact"},{"name":"Delta:H(5)C(2)","type":"related"},{"name":"Dimethyl","type":"related"},{"name":"Dimethylation of proline residue","type":"related"},{"name":"MOD_RES N,N-dimethylproline","type":"exact"},{"name":"N,N-dimethyl-L-proline","type":"exact"},{"name":"N,N-dimethyl-L-prolinium","type":"exact"},{"name":"N,N-dimethylated L-proline","type":"exact"},{"name":"NMe2Pro","type":"exact"},{"name":"stachydrin","type":"exact"}],"termid":"MOD:00075"}


id: PATO:0001509
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single physical entity that arises by virtue of whether the bearer exhibits the ability to perform a regular function(s).","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical object quality","termid":"PATO:0001241"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionality","termid":"PATO:0001509"}


id: PBO:0069314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 572, pseudogene","termid":"PBO:0069314"}


id: PBO:0082473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calpain-like cysteine protease; involved in proteolytic activation of Rim101p in response to alkaline pH; localizes to punctate structures in alkaline conditions and in vps4 mutant; has similarity to A. nidulans palB","termid":"PBO:0082473"}


id: GO:0021954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a neuron whose cell body is located in the central nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron.","definition_xrefs":["GO_REF:0000021","GOC:jid","GOC:dgh","GOC:dph","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron development","termid":"GO:0048666"},{"relation_name":"part_of","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central nervous system neuron development","termid":"GO:0021954"}


id: MONDO:0012336
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early-onset non-syndromic cataract in which the cause of the disease is a mutation in the CRYBB3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 22 multiple types","secondary_identifiers":["UMLS:C1857853","MEDGEN:341862","MESH:C565725","OMIM:609741","DOID:0110268"],"synonyms":[{"name":"CATCN2","type":"narrow"},{"name":"CRYBB3 early-onset non-syndromic cataract","type":"exact"},{"name":"CTRCT22","type":"exact"},{"name":"autosomal recessive congenital nuclear cataract 2","type":"narrow"},{"name":"cataract 22","type":"exact"},{"name":"cataract 22, multiple types","type":"related"},{"name":"cataract, congenital nuclear, autosomal recessive 2","type":"related"},{"name":"early-onset non-syndromic cataract caused by mutation in CRYBB3","type":"exact"}],"termid":"MONDO:0012336","xrefs":{"Monarch":{"xref_id":"0012336"}}}


id: GO:1901860
data:
  {"annotated_genes":["SJAG_03957"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090297"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitochondrial DNA metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:yaf","PMID:23150719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"regulation of mitochondrion organization","termid":"GO:0010821"},{"relation_name":"is_a","term_name":"positive regulation of DNA metabolic process","termid":"GO:0051054"},{"relation_name":"is_a","term_name":"regulation of mitochondrial DNA metabolic process","termid":"GO:1901858"},{"relation_name":"positively_regulates","term_name":"mitochondrion organization","termid":"GO:0007005"},{"relation_name":"positively_regulates","term_name":"mitochondrial DNA metabolic process","termid":"GO:0032042"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03957":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007005"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0007005"],"is_obsolete":false,"name":"positive regulation of mitochondrial DNA metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of mitochondrial DNA metabolic process","type":"narrow"},{"name":"activation of mitochondrial DNA metabolism","type":"exact"},{"name":"activation of mtDNA metabolic process","type":"exact"},{"name":"activation of mtDNA metabolism","type":"exact"},{"name":"positive regulation of mitochondrial DNA metabolism","type":"exact"},{"name":"positive regulation of mtDNA metabolic process","type":"exact"},{"name":"positive regulation of mtDNA metabolism","type":"exact"},{"name":"up regulation of mitochondrial DNA metabolic process","type":"exact"},{"name":"up regulation of mitochondrial DNA metabolism","type":"exact"},{"name":"up regulation of mtDNA metabolic process","type":"exact"},{"name":"up regulation of mtDNA metabolism","type":"exact"},{"name":"up-regulation of mitochondrial DNA metabolic process","type":"exact"},{"name":"up-regulation of mitochondrial DNA metabolism","type":"exact"},{"name":"up-regulation of mtDNA metabolic process","type":"exact"},{"name":"up-regulation of mtDNA metabolism","type":"exact"},{"name":"upregulation of mitochondrial DNA metabolic process","type":"exact"},{"name":"upregulation of mitochondrial DNA metabolism","type":"exact"},{"name":"upregulation of mtDNA metabolic process","type":"exact"},{"name":"upregulation of mtDNA metabolism","type":"exact"}],"termid":"GO:1901860","terms_by_termid":{"GO:0090297":null}}


id: GO:0050332
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyridine + thiamine = 5-(2-hydroxyethyl)-4-methylthiazole + heteropyrithiamine.","definition_xrefs":["EC:2.5.1.2","RHEA:17697"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016765","GO:0003824"],"is_obsolete":false,"name":"thiamine pyridinylase activity","secondary_identifiers":["KEGG_REACTION:R02863","MetaCyc:THIAMIN-PYRIDINYLASE-RXN"],"synonyms":[{"name":"pyrimidine transferase activity","type":"related"},{"name":"thiamin hydrolase activity","type":"related"},{"name":"thiamin pyridinolase activity","type":"related"},{"name":"thiamin pyridinylase activity","type":"exact"},{"name":"thiamin:base 2-methyl-4-aminopyrimidine-5-methenyltransferase activity","type":"related"},{"name":"thiaminase I activity","type":"narrow"},{"name":"thiamine hydrolase activity","type":"related"},{"name":"thiamine pyridinolase activity","type":"related"},{"name":"thiamine:base 2-methyl-4-aminopyrimidine-5-methenyltransferase activity","type":"related"}],"termid":"GO:0050332"}


id: PBO:0075161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 17","termid":"PBO:0075161"}


id: GO:0021764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the amygdala over time from its initial formation until its mature state. The amygdala is an almond-shaped set of neurons in the medial temporal lobe of the brain that play a key role in processing emotions such as fear and pleasure.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:jid","ISBN:0878937420","GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"limbic system development","termid":"GO:0021761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amygdala development","termid":"GO:0021764"}


id: PBO:0077340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 79","termid":"PBO:0077340"}


id: GO:0045049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of protein insertion into the endoplasmic reticulum (ER) membrane in which N-terminal cleaved signal sequences direct polypeptides to the ER.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein insertion into ER membrane","termid":"GO:0045048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"protein insertion into ER membrane by N-terminal cleaved signal sequence","synonyms":[{"name":"N-terminal cleaved signal sequence mediated protein insertion into ER membrane","type":"exact"},{"name":"protein insertion into ER membrane, N-terminal cleaved signal sequence mediated","type":"exact"},{"name":"protein insertion into endoplasmic reticulum membrane by N-terminal cleaved signal sequence","type":"exact"},{"name":"protein-ER insertion by N-terminal cleaved signal sequence","type":"exact"},{"name":"protein-endoplasmic reticulum insertion by N-terminal cleaved signal sequence","type":"exact"}],"termid":"GO:0045049"}


id: FYPO:0001528
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of GTP binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abnormal GTP binding","termid":"FYPO:0001528"}


id: MONDO:0026187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic malformation syndrome with short stature (obsolete MONDO:0026187)","secondary_identifiers":["Orphanet:183570"],"termid":"MONDO:0026187","xrefs":{"Monarch":{"xref_id":"0026187"}}}


id: GO:0006315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Lateral transfer of a group II intron to a homologous allele that lacks the intron, mediated by a site-specific endonuclease encoded within the mobile intron; group II introns are self-splicing introns with a conserved secondary structure.","definition_xrefs":["PMID:10487208","GOC:mcc","ISBN:0716743663"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intron homing","termid":"GO:0006314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"homing of group II introns","termid":"GO:0006315"}


id: GO:0030242
data:
  {"annotated_genes":["SJAG_00115","SJAG_00114","SJAG_04552","SJAG_01783","SJAG_04502","SJAG_03851","SJAG_04963","SJAG_05017"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74022,74848,73569,73306,81467,79035,81613,75142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000425"}]},"cv_name":"biological_process","definition":"The process in which peroxisomes are delivered to a type of vacuole and degraded in response to changing nutrient conditions.","definition_xrefs":["GOC:autophagy","PMID:10547367","PMID:20083110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autophagy","termid":"GO:0006914"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00115":null,"SJAG_01783":null,"SJAG_03851":null,"SJAG_04502":null,"SJAG_04552":null,"SJAG_04963":null,"SJAG_05017":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"autophagy of peroxisome","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"peroxisome degradation","type":"broad"},{"name":"peroxisome disassembly","type":"broad"},{"name":"pexophagy","type":"related"}],"termid":"GO:0030242","terms_by_termid":{"GO:0000425":null}}


id: MONDO:0017427
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital deformities of limbs","secondary_identifiers":["Orphanet:294944","UMLS:C0206762","GARD:21181","MedDRA:10024500","MEDGEN:60222"],"termid":"MONDO:0017427","xrefs":{"Monarch":{"xref_id":"0017427"}}}


id: PR:P17478
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpp202 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P17478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein P2-beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23G7.15c","synonyms":[{"name":"A4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpp202","type":"exact"}],"termid":"PR:P17478"}


id: MONDO:1012763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neuroaxonal dystrophy that occurs in dogs due to a mutation in the TECPR2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"neuroaxonal dystrophy, dog","termid":"MONDO:1011561"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroaxonal dystrophy, TECPR2-related, dog","secondary_identifiers":["OMIA:001975-9615"],"termid":"MONDO:1012763","xrefs":{"Monarch":{"xref_id":"1012763"}}}


id: MONDO:0019355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare inflammatory multisystem disorder characterized clinically by fever of unknown origin, arthralgia or arthritis, hyperleucocytosis, and typical skin rash.","definition_xrefs":["Orphanet:829"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"rheumatic disorder","termid":"MONDO:0005554"},{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"arthritic joint disease","termid":"MONDO:0005578"},{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adult-onset Still disease","secondary_identifiers":["NANDO:1200282","icd11.foundation:549009522","MESH:D014924","ICD10CM:M06.1","MedDRA:10058493","NORD:737","GARD:436","ICD9:714.2","EFO:0007135","MESH:D016706","DOID:14256","SCTID:68190001","ICD9:759.89","SCTID:239920006","MEDGEN:39007","MedDRA:10064056","UMLS:C0085253"],"synonyms":[{"name":"AOSD","type":"exact"},{"name":"Adult-Onset Still's Disease","type":"exact"},{"name":"Still's disease adult onset","type":"related"},{"name":"Wissler-Fanconi syndrome","type":"exact"},{"name":"adult Still's disease","type":"related"},{"name":"adult onset Still's disease","type":"exact"},{"name":"adult-onset Still disease","type":"exact"},{"name":"adult-onset Still's disease","type":"exact"}],"termid":"MONDO:0019355","xrefs":{"Monarch":{"xref_id":"0019355"}}}


id: PBO:0065211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peripherin","termid":"PBO:0065211"}


id: GO:0008365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synthesis and deposition of the chitin-based cuticle of adults following the apolysis of the pupal cuticle. The adult insect cuticle contains cuticullin, a protein epicuticle and a lamellate procuticle. An example of this process is adult chitin-based cuticle development in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:bf","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chitin-based cuticle development","termid":"GO:0040003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adult chitin-based cuticle development","synonyms":[{"name":"adult chitin-based cuticle anabolism","type":"exact"},{"name":"adult chitin-based cuticle biosynthetic process","type":"exact"},{"name":"adult chitin-based cuticle formation","type":"exact"},{"name":"adult chitin-based cuticle synthesis","type":"exact"},{"name":"adult cuticle anabolism","type":"broad"},{"name":"adult cuticle biosynthetic process","type":"broad"},{"name":"adult cuticle formation","type":"broad"},{"name":"adult cuticle synthesis","type":"broad"}],"termid":"GO:0008365"}


id: PBO:0028643
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_dehydrodolichyl_diphosphate_synthase_activity","termid":"PBO:0028643"}


id: PR:O14014
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rga3 gene.","definition_xrefs":["UniProtKB:O14014","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho-type GTPase-activating protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.11","synonyms":[{"name":"Spom972h-rga3","type":"exact"}],"termid":"PR:O14014"}


id: PBO:0086538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YBR027C is not an essential gene","termid":"PBO:0086538"}


id: GO:0019833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the formation of ice crystals in extracellular fluid at relatively high temperatures (up to -2 degrees Celsius) to protect the organism from damage by intracellular ice formation. This process is commonly found in certain bacteria, such as Pseudomonas syringae, and plays roles in environmental adaptation and plant pathogenesis.","definition_xrefs":["UniProt:KW-0387","PMID:35551271","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ice binding","termid":"GO:0050825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ice nucleation activity","secondary_identifiers":["TC:9.B.133.1.1"],"termid":"GO:0019833"}


id: PBO:0041769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain 9","termid":"PBO:0041769"}


id: GO:0034031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a ribonucleoside bisphosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with one phosphate group attached to each of two different hydroxyl groups on the sugar.","definition_xrefs":["GOC:mah","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside bisphosphate catabolic process","termid":"GO:0033869"},{"relation_name":"is_a","term_name":"ribonucleoside bisphosphate metabolic process","termid":"GO:0033875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ribonucleoside bisphosphate catabolic process","synonyms":[{"name":"ribonucleoside bisphosphate breakdown","type":"exact"},{"name":"ribonucleoside bisphosphate catabolism","type":"exact"},{"name":"ribonucleoside bisphosphate degradation","type":"exact"}],"termid":"GO:0034031"}


id: GO:0044515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of glucagon-like peptide receptor 1 activity in of the bitten organism.","definition_xrefs":["GOC:jl","GOC:fj"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in positive regulation of glucagon-like peptide receptor 1 activity in another organism (obsolete GO:0044515)","synonyms":[{"name":"envenomation resulting in positive regulation of glucagon-like peptide receptor 1 activity in other organism","type":"exact"}],"termid":"GO:0044515"}


id: PBO:0069296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 552, pseudogene","termid":"PBO:0069296"}


id: MONDO:1010017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Patent ductus arteriosus that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"heart disorder, non-human animal","termid":"MONDO:1012982"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patent ductus arteriosus, non-human animal","secondary_identifiers":["OMIA:000779"],"termid":"MONDO:1010017","xrefs":{"Monarch":{"xref_id":"1010017"}}}


id: PBO:0017687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c1 heme lyase Cyt2 (predicted)","termid":"PBO:0017687"}


id: MONDO:0013499
data:
  {"annotated_genes":["SJAG_05180"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88536],"is_not":false,"summary":null,"term":"MONDO:0013499"}]},"cv_name":"mondo","definition":"Any Fanconi anemia in which the cause of the disease is a mutation in the SLX4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi anemia","termid":"MONDO:0019391"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05180":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005066","MONDO:0005570","MONDO:0021190","MONDO:0005046"],"is_obsolete":false,"name":"Fanconi anemia complementation group P","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3469542","MEDGEN:854020","DOID:0111092","GARD:15731","OMIM:613951"],"synonyms":[{"name":"FANCP","type":"exact"},{"name":"Fanconi Anemia, complementation group type P","type":"exact"},{"name":"Fanconi anaemia caused by mutation in SLX4","type":"exact"},{"name":"Fanconi anaemia caused by mutation in Slx4","type":"exact"},{"name":"Fanconi anaemia complementation group type P","type":"exact"},{"name":"Fanconi anemia caused by mutation in SLX4","type":"exact"},{"name":"Fanconi anemia caused by mutation in Slx4","type":"exact"},{"name":"Fanconi anemia complementation group type P","type":"exact"},{"name":"Fanconi anemia, complementation group P","type":"related"},{"name":"SLX4 Fanconi anaemia","type":"exact"},{"name":"SLX4 Fanconi anemia","type":"exact"},{"name":"Slx4 Fanconi anaemia","type":"exact"},{"name":"Slx4 Fanconi anemia","type":"exact"}],"termid":"MONDO:0013499","terms_by_termid":{"MONDO:0013499":null},"xrefs":{"Monarch":{"xref_id":"0013499"}}}


id: GO:0000775
data:
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In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome.","definition_xrefs":["GOC:cjm","GOC:kmv","GOC:elh","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal region","termid":"GO:0098687"}],"gene_count":146,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00170":null,"SJAG_00207":null,"SJAG_00229":null,"SJAG_00302":null,"SJAG_00307":null,"SJAG_00335":null,"SJAG_00350":null,"SJAG_00414":null,"SJAG_00418":null,"SJAG_00483":null,"SJAG_00594":null,"SJAG_00600":null,"SJAG_00646":null,"SJAG_00666":null,"SJAG_00678":null,"SJAG_00684":null,"SJAG_00697":null,"SJAG_00756":null,"SJAG_00768":null,"SJAG_00794":null,"SJAG_00806":null,"SJAG_00918":null,"SJAG_00934":null,"SJAG_00935":null,"SJAG_01046":null,"SJAG_01050":null,"SJAG_01067":null,"SJAG_01075":null,"SJAG_01082":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01228":null,"SJAG_01278":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01332":null,"SJAG_01371":null,"SJAG_01410":null,"SJAG_01540":null,"SJAG_01546":null,"SJAG_01579":null,"SJAG_01601":null,"SJAG_01613":null,"SJAG_01717":null,"SJAG_01745":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01831":null,"SJAG_01836":null,"SJAG_01837":null,"SJAG_01873":null,"SJAG_01928":null,"SJAG_02119":null,"SJAG_02299":null,"SJAG_02336":null,"SJAG_02346":null,"SJAG_02401":null,"SJAG_02409":null,"SJAG_02451":null,"SJAG_02465":null,"SJAG_02513":null,"SJAG_02621":null,"SJAG_02624":null,"SJAG_02651":null,"SJAG_02664":null,"SJAG_02725":null,"SJAG_02731":null,"SJAG_02761":null,"SJAG_02773":null,"SJAG_02778":null,"SJAG_02807":null,"SJAG_02814":null,"SJAG_02846":null,"SJAG_02866":null,"SJAG_02927":null,"SJAG_02990":null,"SJAG_03042":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03161":null,"SJAG_03183":null,"SJAG_03193":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03327":null,"SJAG_03350":null,"SJAG_03353":null,"SJAG_03356":null,"SJAG_03418":null,"SJAG_03437":null,"SJAG_03449":null,"SJAG_03491":null,"SJAG_03540":null,"SJAG_03543":null,"SJAG_03567":null,"SJAG_03619":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03680":null,"SJAG_03681":null,"SJAG_03683":null,"SJAG_03689":null,"SJAG_03789":null,"SJAG_03832":null,"SJAG_03844":null,"SJAG_03867":null,"SJAG_03916":null,"SJAG_03926":null,"SJAG_03942":null,"SJAG_03945":null,"SJAG_03982":null,"SJAG_03989":null,"SJAG_03997":null,"SJAG_04030":null,"SJAG_04038":null,"SJAG_04039":null,"SJAG_04040":null,"SJAG_04076":null,"SJAG_04126":null,"SJAG_04141":null,"SJAG_04142":null,"SJAG_04177":null,"SJAG_04186":null,"SJAG_04253":null,"SJAG_04255":null,"SJAG_04259":null,"SJAG_04412":null,"SJAG_04508":null,"SJAG_04574":null,"SJAG_04581":null,"SJAG_04623":null,"SJAG_04670":null,"SJAG_04696":null,"SJAG_04699":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_04884":null,"SJAG_05019":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05273":null,"SJAG_05319":null,"SJAG_05321":null,"SJAG_05329":null,"SJAG_05372":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"chromosome, centromeric region","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:21802294":null,"PMID:32109380":null},"secondary_identifiers":["GO:0097521","SO:0000577"],"synonyms":[{"name":"centromere","type":"related"},{"name":"centromere complex","type":"exact"},{"name":"chromosome, centric region","type":"exact"},{"name":"chromosome, pericentric region","type":"related"}],"termid":"GO:0000775","terms_by_termid":{"GO:0000444":null,"GO:0000775":null,"GO:0000776":null,"GO:0000779":null,"GO:0000939":null,"GO:0000940":null,"GO:0005721":null,"GO:0031262":null,"GO:0031511":null,"GO:0033551":null,"GO:0034506":null,"GO:0042729":null,"GO:0043505":null,"GO:0061638":null,"GO:0061838":null,"GO:0180019":null}}


id: GO:0018152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-histidine and peptidyl-tyrosine to form a 3'-(1'-L-histidyl)-L-tyrosine protein cross-link.","definition_xrefs":["RESID:AA0270"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 3'-(1'-L-histidyl)-L-tyrosine (obsolete GO:0018152)","termid":"GO:0018152"}


id: MONDO:0017698
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease due to glycogen branching enzyme deficiency","termid":"MONDO:0009292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"glycogen storage disease due to glycogen branching enzyme deficiency, congenital neuromuscular form","secondary_identifiers":["UMLS:C1856304","GARD:17397","MEDGEN:343523","Orphanet:308670"],"synonyms":[{"name":"GBE deficiency, congenital neuromuscular form","type":"exact"},{"name":"GSD due to glycogen branching enzyme deficiency, congenital neuromuscular form","type":"exact"},{"name":"GSD type 4, congenital neuromuscular form","type":"exact"},{"name":"GSDIV, congenital neuromuscular form","type":"exact"},{"name":"glycogen storage disease type 4, congenital neuromuscular form","type":"exact"},{"name":"glycogen storage disease type IV, congenital neuromuscular form","type":"exact"},{"name":"glycogenosis due to glycogen branching enzyme deficiency, congenital neuromuscular form","type":"exact"},{"name":"glycogenosis type 4, congenital neuromuscular form","type":"exact"},{"name":"glycogenosis type IV, congenital neuromuscular form","type":"exact"}],"termid":"MONDO:0017698","xrefs":{"Monarch":{"xref_id":"0017698"}}}


id: GO:0032558
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an adenyl deoxyribonucleotide, any compound consisting of adenosine esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the deoxyribose moiety.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenyl nucleotide binding","termid":"GO:0030554"},{"relation_name":"is_a","term_name":"purine deoxyribonucleotide binding","termid":"GO:0032554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"adenyl deoxyribonucleotide binding","termid":"GO:0032558"}


id: GO:0005849
data:
  {"annotated_genes":["SJAG_01175","SJAG_04022","SJAG_03500","SJAG_01791","SJAG_01412","SJAG_03226","SJAG_02037","SJAG_00527","SJAG_03233","SJAG_04587","SJAG_03126","SJAG_02865","SJAG_03728","SJAG_00961","SJAG_01599","SJAG_02720","SJAG_03853","SJAG_03624","SJAG_03594"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[120087,78565,95251,71731,81098,79293,113806,72808,69701,73049,74851,74346,71828,113148,72096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005847"},{"annotations":[101438,99947,111662,95273,100901,113423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005848"}]},"cv_name":"cellular_component","definition":"Any macromolecular complex involved in cleavage or polyadenylation of mRNA molecules.","definition_xrefs":["GOC:mah","PMID:10357856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00527":null,"SJAG_00961":null,"SJAG_01175":null,"SJAG_01412":null,"SJAG_01599":null,"SJAG_01791":null,"SJAG_02037":null,"SJAG_02720":null,"SJAG_02865":null,"SJAG_03126":null,"SJAG_03226":null,"SJAG_03233":null,"SJAG_03500":null,"SJAG_03594":null,"SJAG_03624":null,"SJAG_03728":null,"SJAG_03853":null,"SJAG_04022":null,"SJAG_04587":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"mRNA cleavage factor complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0005849","terms_by_termid":{"GO:0005847":null,"GO:0005848":null}}


id: GO:0042129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T cell proliferation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte proliferation","termid":"GO:0050670"},{"relation_name":"is_a","term_name":"regulation of T cell activation","termid":"GO:0050863"},{"relation_name":"regulates","term_name":"T cell proliferation","termid":"GO:0042098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell proliferation","synonyms":[{"name":"regulation of T lymphocyte proliferation","type":"exact"},{"name":"regulation of T-cell proliferation","type":"exact"},{"name":"regulation of T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0042129"}


id: PBO:0063425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 4D","termid":"PBO:0063425"}


id: FYPO_EXT:0000004
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extensions","definition":"all cells (penetrance)","definition_xrefs":["PomBase:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FYPO penetrance extension","termid":"FYPO_EXT:1000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complete","synonyms":[{"name":"100%","type":"exact"},{"name":"full","type":"exact"}],"termid":"FYPO_EXT:0000004"}


id: GO:0034319
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: butanoyl-CoA + an alcohol = CoA + a butyl ester.","definition_xrefs":["GOC:mah","PMID:16361250"],"gene_count":0,"genotype_count":0,"name":"obsolete alcohol O-butanoyltransferase activity (obsolete GO:0034319)","termid":"GO:0034319"}


id: FYPO:0006186
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of contractile ring assembly is increased. Contractile ring assembly is the part of cytokinesis in which the actomyosin contractile ring is formed of actin, myosin, and associated proteins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring assembly","termid":"FYPO:0000161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0001320","FYPO:0004803"],"is_obsolete":false,"name":"increased rate of actomyosin contractile ring assembly","synonyms":[{"name":"increased rate of actomyosin contractile ring assembly during mitotic cell cycle","type":"related"},{"name":"increased rate of actomyosin contractile ring assembly during vegetative growth","type":"exact"},{"name":"increased rate of contractile ring assembly","type":"exact"},{"name":"increased rate of cytokinetic contractile ring assembly","type":"exact"},{"name":"increased rate of mitotic contractile ring assembly","type":"exact"}],"termid":"FYPO:0006186"}


id: PATO:0001482
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's standing out or projecting beyond a surface or line.","definition_xrefs":["Dictionary.com:Dictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protruding","termid":"PATO:0001598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prominent","termid":"PATO:0001482"}


id: PBO:0050239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 17","termid":"PBO:0050239"}


id: PR:O60068
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A LYR motif-containing protein 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03832","PANTHER:PTHR13166:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein isd11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.06c","secondary_identifiers":["UniProtKB:O60068"],"synonyms":[{"name":"Spom972h-LYRM4","type":"exact"}],"termid":"PR:O60068"}


id: PBO:0084262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral ER membrane protein that stimulates Sar1p GTPase activity; involved in COPII vesicle budding through disassociation of coat proteins from membranes onto liposomes; binds Sec16p; SED4 has a paralog, SEC12, that arose from the whole genome duplication","termid":"PBO:0084262"}


id: PBO:0056086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LY86 antisense RNA 1","termid":"PBO:0056086"}


id: GO:0031780
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a corticotropin hormone receptor.","definition_xrefs":["GOC:nln","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocortin receptor binding","termid":"GO:0031779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"corticotropin hormone receptor binding","secondary_identifiers":["GO:0071856"],"synonyms":[{"name":"ACTH receptor binding","type":"exact"},{"name":"adrenocorticotropic hormone receptor ligand","type":"narrow"},{"name":"adrenocorticotropin hormone receptor binding","type":"exact"},{"name":"adrenocorticotropin receptor binding","type":"exact"},{"name":"corticotropin receptor binding","type":"exact"}],"termid":"GO:0031780"}


id: PBO:0027999
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_spherical_vegetative_cell","termid":"PBO:0027999"}


id: PBO:0003762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA turnover and ribosome assembly protein Mrt4 (predicted)","termid":"PBO:0003762"}


id: PATO:0000614
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pattern where all the repeated elements are oriented in the same direction.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regular spatial pattern","termid":"PATO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oriented","termid":"PATO:0000614"}


id: GO:0018379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The linkage of cytochromes and other heme proteins to heme via heme-bis-L-cysteine.","definition_xrefs":["RESID:AA0134"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome c-heme linkage via heme-bis-L-cysteine (obsolete GO:0018379)","synonyms":[{"name":"cytochrome c-haem linkage via haem-bis-L-cysteine","type":"exact"}],"termid":"GO:0018379"}


id: PBO:0049509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 16","termid":"PBO:0049509"}


id: GO:0032634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-5 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-5 production","secondary_identifiers":["GO:0072603","GO:0042225"],"synonyms":[{"name":"IL-5 production","type":"exact"},{"name":"interleukin-5 biosynthetic process","type":"narrow"},{"name":"interleukin-5 secretion","type":"narrow"}],"termid":"GO:0032634"}


id: PBO:0070653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 24","termid":"PBO:0070653"}


id: GO:0102577
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-oxopalmitic acid + H+ = 2-pentadecanone + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxo-palmitate decarboxylase activity (obsolete GO:0102577)","termid":"GO:0102577"}


id: PR:Q1MTR4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cti6 gene.","definition_xrefs":["UniProtKB:Q1MTR4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase complex subunit cti6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.08","synonyms":[{"name":"Spom972h-cti6","type":"exact"}],"termid":"PR:Q1MTR4"}


id: MONDO:0001343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disease in which the causes of the disease is a perturbation of the kidney leading to its dysfunction.","definition_xrefs":["MONDO:patterns/disease_by_dysfunctional_structure"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"impaired renal function disease","secondary_identifiers":["SCTID:197663003","DOID:11705","MEDGEN:574572","UMLS:C0341677","ICD10CM:N25","ICD9:588.89","ICD9:588.8","ICD9:588.9"],"synonyms":[{"name":"disease of kidney","type":"broad"},{"name":"kidney disease","type":"broad"}],"termid":"MONDO:0001343","xrefs":{"Monarch":{"xref_id":"0001343"}}}


id: PBO:0083781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein associated with the U1 snRNP complex; splicing factor involved in recognition of 5' splice site; contains two zinc finger motifs; N-terminal zinc finger binds pre-mRNA; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0083781"}


id: GO:0004215
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide bonds, acting as an aminopeptidase (notably, cleaving Arg-Xaa bonds) as well as an endopeptidase.","definition_xrefs":["EC:3.4.22.16"],"gene_count":0,"genotype_count":0,"name":"obsolete cathepsin H activity (obsolete GO:0004215)","synonyms":[{"name":"N-benzoylarginine-beta-naphthylamide hydrolase activity","type":"related"},{"name":"aleurain activity","type":"related"},{"name":"benzoylarginine-naphthylamide (BANA) hydrolase activity","type":"related"},{"name":"cathepsin B3 activity","type":"related"},{"name":"cathepsin BA activity","type":"related"},{"name":"cathepsin Ba","type":"related"},{"name":"cathepsin H activity","type":"exact"}],"termid":"GO:0004215"}


id: PBO:0049238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRM7 antisense RNA 2","termid":"PBO:0049238"}


id: GO:0047575
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-2-(carboxymethyl)-5-oxo-2,5-dihydro-2-furoate + H+ = 5-oxo-4,5-dihydro-2-furylacetate + CO2.","definition_xrefs":["EC:4.1.1.44","RHEA:23348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"4-carboxymuconolactone decarboxylase activity","secondary_identifiers":["MetaCyc:4-CARBOXYMUCONOLACTONE-DECARBOXYLASE-RXN","KEGG_REACTION:R03470"],"synonyms":[{"name":"4-carboxymonolactone carboxy-lyase activity","type":"related"},{"name":"4-carboxymuconolactone carboxy-lyase (4,5-dihydro-5-oxofuran-2-acetate-forming)","type":"related"},{"name":"4-carboxymuconolactone carboxy-lyase activity","type":"related"},{"name":"gamma-4-carboxymuconolactone decarboxylase activity","type":"related"}],"termid":"GO:0047575"}


id: FYECO:0000427
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing fructose as the carbon source, yeast extract and other components. The concentration of fructose is typically around 2%.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose YE","synonyms":[{"name":"fructose rich medium","type":"broad"}],"termid":"FYECO:0000427"}


id: PBO:0054614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2019","termid":"PBO:0054614"}


id: MONDO:0033969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"inflammatory bowel disease-recurrent sinopulmonary infections syndrome","secondary_identifiers":["Orphanet:529980","UMLS:C5568532","GARD:22205","MEDGEN:1799955"],"termid":"MONDO:0033969","xrefs":{"Monarch":{"xref_id":"0033969"}}}


id: GO:0010038
data:
  {"annotated_genes":["SJAG_02599","SJAG_01351","SJAG_04454","SJAG_01344","SJAG_03799","SJAG_04403","SJAG_04516","SJAG_03497","SJAG_01233","SJAG_00044","SJAG_03879","SJAG_03631","SJAG_02858","SJAG_01803","SJAG_00988","SJAG_01078"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72591,98862,120071,98824,110268,95118],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0098849"},{"annotations":[90695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071276"},{"annotations":[117986,115215,102813,99920,112008,116535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071277"},{"annotations":[94947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071248"},{"annotations":[116536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035865"},{"annotations":[72590],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010273"},{"annotations":[95580,95579],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010312"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a metal ion stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00988":null,"SJAG_01078":null,"SJAG_01233":null,"SJAG_01344":null,"SJAG_01351":null,"SJAG_01803":null,"SJAG_02599":null,"SJAG_02858":null,"SJAG_03497":null,"SJAG_03631":null,"SJAG_03799":null,"SJAG_03879":null,"SJAG_04403":null,"SJAG_04454":null,"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to metal ion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5660526"],"synonyms":[{"name":"heavy metal sensitivity/resistance","type":"related"},{"name":"response to heavy metal","type":"narrow"},{"name":"response to metal","type":"exact"}],"termid":"GO:0010038","terms_by_termid":{"GO:0010273":null,"GO:0010312":null,"GO:0035865":null,"GO:0071248":null,"GO:0071276":null,"GO:0071277":null,"GO:0098849":null}}


id: PBO:0061989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily B member 11","termid":"PBO:0061989"}


id: MONDO:0015469
data:
  {"annotated_genes":["SJAG_04270","SJAG_02200","SJAG_04995","SJAG_03249","SJAG_02165"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008726"},{"annotations":[86867],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020667"},{"annotations":[87216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014558"},{"annotations":[87323,87322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009039"},{"annotations":[88404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013740"}]},"cv_name":"mondo","definition":"Craniosynostosis is defined as the premature fusion of one or more cranial sutures leading to secondary distortion of skull shape resulting in skull deformities with a variable presentation. Craniosynostosis may occur in an isolated setting or as part of a syndrome.","definition_xrefs":["Orphanet:1531"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synostosis","termid":"MONDO:0001411"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02165":null,"SJAG_02200":null,"SJAG_03249":null,"SJAG_04270":null,"SJAG_04995":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"craniosynostosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1163","NANDO:2100227","ICD10CM:Q75.0","MedDRA:10048907","UMLS:C0010278","DOID:2340","NCIT:C84655","GARD:6209","icd11.foundation:458033798","OMIMPS:123100","MESH:D003398","MedDRA:10049889"],"synonyms":[{"name":"CSO","type":"related"},{"name":"craniosynostosis syndrome","type":"exact"},{"name":"premature closure of cranial sutures","type":"exact"}],"termid":"MONDO:0015469","terms_by_termid":{"MONDO:0008726":null,"MONDO:0009039":null,"MONDO:0013740":null,"MONDO:0014558":null,"MONDO:0020667":null},"xrefs":{"Monarch":{"xref_id":"0015469"}}}


id: GO:0070379
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to high mobility group box 1 (HMBGB1).","definition_xrefs":["PMID:18431461","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"high mobility group box 1 binding","synonyms":[{"name":"HMGB1 binding","type":"exact"}],"termid":"GO:0070379"}


id: PBO:0080837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 1 pseudogene 1","termid":"PBO:0080837"}


id: SO:0001081
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif comprising two helices separated by a turn.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"has_part","term_name":"peptide_helix","termid":"SO:0001114"},{"relation_name":"has_part","term_name":"polypeptide_turn_motif","termid":"SO:0001128"},{"relation_name":"is_a","term_name":"polypeptide_structural_motif","termid":"SO:0001079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"helix_turn_helix","secondary_identifiers":["BS:00147"],"synonyms":[{"name":"HTH","type":"related"},{"name":"helix turn helix","type":"exact"},{"name":"helix-turn-helix","type":"exact"}],"termid":"SO:0001081"}


id: MONDO:0032890
data:
  {"annotated_genes":["SJAG_01315"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88614],"is_not":false,"summary":null,"term":"MONDO:0032890"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01315":null},"genotype_count":0,"is_obsolete":false,"name":"neuromuscular disease and ocular or auditory anomalies with or without seizures","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618733","UMLS:C5231483","MEDGEN:1684689"],"synonyms":[{"name":"NEUROMUSCULAR DISEASE AND OCULAR OR AUDITORY ANOMALIES WITH OR WITHOUT SEIZURES","type":"related"},{"name":"NMOAS","type":"related"}],"termid":"MONDO:0032890","terms_by_termid":{"MONDO:0032890":null},"xrefs":{"Monarch":{"xref_id":"0032890"}}}


id: GO:1901734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of quercetin.","definition_xrefs":["GOC:yaf","UniPathway:UPA00724","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavone biosynthetic process","termid":"GO:0051553"},{"relation_name":"is_a","term_name":"quercetin metabolic process","termid":"GO:1901732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"quercetin biosynthetic process","synonyms":[{"name":"quercetin anabolism","type":"exact"},{"name":"quercetin biosynthesis","type":"exact"},{"name":"quercetin formation","type":"exact"},{"name":"quercetin synthesis","type":"exact"}],"termid":"GO:1901734"}


id: GO:0033274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin B2 stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to vitamin B2","synonyms":[{"name":"response to riboflavin","type":"exact"}],"termid":"GO:0033274"}


id: GO:0006384
data:
  {"annotated_genes":["SJAG_00421","SJAG_05339","SJAG_01827","SJAG_00067","SJAG_03354","SJAG_02600","SJAG_03035","SJAG_02815","SJAG_03007","SJAG_03120","SJAG_00585"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57088,72870,75485,81554,90001,90732,97395,108758,117224],"is_not":false,"summary":null,"term":"GO:0006384"},{"annotations":[73546,104891],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070898"}]},"cv_name":"biological_process","definition":"A transcription initiation process that takes place at a RNA polymerase III gene promoter. Transfer RNAs (tRNA) genes, as well as some other non-coding RNAs, are transcribed by RNA polymerase III.","definition_xrefs":["GOC:txnOH","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription initiation","termid":"GO:0006352"},{"relation_name":"part_of","term_name":"transcription by RNA polymerase III","termid":"GO:0006383"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00067":null,"SJAG_00421":null,"SJAG_00585":null,"SJAG_01827":null,"SJAG_02600":null,"SJAG_02815":null,"SJAG_03007":null,"SJAG_03035":null,"SJAG_03120":null,"SJAG_03354":null,"SJAG_05339":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"transcription initiation at RNA polymerase III promoter","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0001024","GO:0001023","GO:0001022","GO:0001036"],"synonyms":[{"name":"transcription initiation from Pol III promoter","type":"exact"},{"name":"transcription initiation from RNA polymerase III hybrid type promoter","type":"narrow"},{"name":"transcription initiation from RNA polymerase III promoter","type":"exact"},{"name":"transcription initiation from RNA polymerase III type 1 promoter","type":"narrow"},{"name":"transcription initiation from RNA polymerase III type 2 promoter","type":"narrow"},{"name":"transcription initiation from RNA polymerase III type 3 promoter","type":"narrow"}],"termid":"GO:0006384","terms_by_termid":{"GO:0006384":null,"GO:0070898":null}}


id: PBO:0054678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2086","termid":"PBO:0054678"}


id: MONDO:0044239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete median-ulnar nerve communications (obsolete MONDO:0044239)","secondary_identifiers":["OMIM:155150"],"synonyms":[{"name":"Martin-Gruber Median-ulnar anastomosis","type":"related"},{"name":"median-ulnar nerve communications","type":"related"}],"termid":"MONDO:0044239","xrefs":{"Monarch":{"xref_id":"0044239"}}}


id: MOD:01982
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from RESID","definition_xrefs":["PubMed:23818633","PubMed:23978223","ChEBI:17750","RESID:AA0619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated glycine","termid":"MOD:00714"},{"relation_name":"is_a","term_name":"alpha-amino trimethylated protonated-residue","termid":"MOD:01698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N,N-trimethylglycine","synonyms":[{"name":"(trimethylammonio)ethanoic acid","type":"exact"},{"name":"1-carboxy-N,N,N-trimethylmethanazanium","type":"exact"},{"name":"2-trimethylammonioacetate","type":"exact"},{"name":"MOD_RES N,N,N-trimethylglycine","type":"exact"},{"name":"N,N,N-trimethylglycine cation","type":"exact"},{"name":"N,N,N-trimethylglycinium","type":"exact"},{"name":"N2Me3+Gly","type":"exact"},{"name":"betaine","type":"exact"},{"name":"carboxy-N,N,N-trimethylmethanaminium","type":"exact"},{"name":"carboxymethyl-trimethylazanium","type":"exact"},{"name":"glycine betaine","type":"exact"}],"termid":"MOD:01982"}


id: MONDO:0013574
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cutis laxa - Marfanoid syndrome","secondary_identifiers":["MESH:C563639","GARD:17069","OMIM:614100","SCTID:254221009","UMLS:C0432335","Orphanet:171719","icd11.foundation:467492754","MEDGEN:96594"],"synonyms":[{"name":"cutis laxa - Marfanoid syndrome","type":"exact"},{"name":"cutis laxa, neonatal, with MARFANOID phenotype","type":"related"}],"termid":"MONDO:0013574","xrefs":{"Monarch":{"xref_id":"0013574"}}}


id: GO:0090101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","termid":"GO:0090092"},{"relation_name":"negatively_regulates","term_name":"cell surface receptor protein serine/threonine kinase signaling pathway","termid":"GO:0007178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","synonyms":[{"name":"negative regulation of transmembrane receptor protein serine/threonine kinase signalling pathway","type":"exact"}],"termid":"GO:0090101"}


id: PBO:0061366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 26","termid":"PBO:0061366"}


id: MONDO:0024429
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorienting neuropsychological condition that affects perception. People experience size distortion such as micropsia, macropsia, pelopsia, or teleopsia. Size distortion may occur of other sensory modalities.","definition_xrefs":["Wikipedia:Alice_in_Wonderland_syndrome"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"vision disorder","termid":"MONDO:0021084"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alice in Wonderland syndrome","secondary_identifiers":["NCIT:C116362","MESH:D062026","UMLS:C0854348","MEDGEN:473310"],"termid":"MONDO:0024429","xrefs":{"Monarch":{"xref_id":"0024429"}}}


id: GO:0004207
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete effector caspase activity (obsolete GO:0004207)","synonyms":[{"name":"effector caspase activity","type":"exact"}],"termid":"GO:0004207"}


id: GO:0021875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands that contributes to the self renewal of neuroblasts in the forebrain.","definition_xrefs":["GO_REF:0000021","PMID:16226447","GOC:jid","GOC:cls","GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"},{"relation_name":"part_of","term_name":"forebrain neuroblast division","termid":"GO:0021873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"fibroblast growth factor receptor signaling pathway involved in forebrain neuroblast division","synonyms":[{"name":"fibroblast growth factor receptor signalling pathway in forebrain neuroblast division","type":"exact"}],"termid":"GO:0021875"}


id: PBO:0051702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate-5-phosphatase B","termid":"PBO:0051702"}


id: PBO:0029549
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_nitrogen_starvation_gene_mRNA_during_vegetative_growth","termid":"PBO:0029549"}


id: PBO:0046052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit F","termid":"PBO:0046052"}


id: GO:0099004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any signal transduction pathway involving calmodulin dependent kinase activity.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete calmodulin dependent kinase signaling pathway (obsolete GO:0099004)","synonyms":[{"name":"CAMK signaling pathway","type":"exact"}],"termid":"GO:0099004"}


id: PBO:0081739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 670","termid":"PBO:0081739"}


id: MONDO:0009227
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any myofibromatosis in which the cause of the disease is a mutation in the PDGFRB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infantile myofibromatosis","termid":"MONDO:0016824"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myofibromatosis, infantile, 1","secondary_identifiers":["SCTID:254146000","ICD9:756.9","MESH:C562978","NCIT:C176943","OMIM:228550","MEDGEN:1632352","UMLS:C4551572"],"synonyms":[{"name":"IMF1","type":"related"},{"name":"PDGFRB myofibromatosis","type":"exact"},{"name":"fibromatosis, congenital generalised","type":"related"},{"name":"fibromatosis, congenital generalized","type":"related"},{"name":"myofibromatosis caused by mutation in PDGFRB","type":"exact"},{"name":"myofibromatosis, infantile, 1","type":"exact"},{"name":"myofibromatosis, infantile, type 1","type":"exact"},{"name":"myofibromatosis, juvenile","type":"related"}],"termid":"MONDO:0009227","xrefs":{"Monarch":{"xref_id":"0009227"}}}


id: GO:0104004
data:
  {"annotated_genes":["SJAG_00729","SJAG_04190","SJAG_01262","SJAG_04726","SJAG_02091","SJAG_00661","SJAG_02334","SJAG_01010","SJAG_05242","SJAG_01648","SJAG_03898","SJAG_02883","SJAG_02342","SJAG_00208","SJAG_03185","SJAG_02199","SJAG_05197","SJAG_04205","SJAG_02818","SJAG_00596","SJAG_02828","SJAG_04150","SJAG_02592","SJAG_00272","SJAG_00409","SJAG_00863","SJAG_02860","SJAG_04877","SJAG_04668","SJAG_03893","SJAG_00814","SJAG_01084","SJAG_02200","SJAG_02182"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009785"},{"annotations":[94214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071474"},{"annotations":[121441,121440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071483"},{"annotations":[91328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071473"},{"annotations":[59413,97787,108333,104614,96176,118942,93705,118143,116325,106352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071470"},{"annotations":[101993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071472"},{"annotations":[104648,97053,78623,110949],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904161"},{"annotations":[71778,60816,97834,69019,98934,106050,67884,66049,89826,70507,77410,107772,95471,66937,114687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070914"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an environmental stimulus.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stimulus","termid":"GO:0051716"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00208":null,"SJAG_00272":null,"SJAG_00409":null,"SJAG_00596":null,"SJAG_00661":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_01010":null,"SJAG_01084":null,"SJAG_01262":null,"SJAG_01648":null,"SJAG_02091":null,"SJAG_02182":null,"SJAG_02199":null,"SJAG_02200":null,"SJAG_02334":null,"SJAG_02342":null,"SJAG_02592":null,"SJAG_02818":null,"SJAG_02828":null,"SJAG_02860":null,"SJAG_02883":null,"SJAG_03185":null,"SJAG_03893":null,"SJAG_03898":null,"SJAG_04150":null,"SJAG_04190":null,"SJAG_04205":null,"SJAG_04668":null,"SJAG_04726":null,"SJAG_04877":null,"SJAG_05197":null,"SJAG_05242":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to environmental stimulus","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null,"PMID:23873862":null},"termid":"GO:0104004","terms_by_termid":{"GO:0009785":null,"GO:0070914":null,"GO:0071470":null,"GO:0071472":null,"GO:0071473":null,"GO:0071474":null,"GO:0071483":null,"GO:1904161":null}}


id: GO:0097656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell-cell recognition process by which a cell distinguishes between self and non self during cooperative behavior, such as early development.","definition_xrefs":["PMID:21700835","PMID:23910661","GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell recognition","termid":"GO:0009988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell-cell self recognition","synonyms":[{"name":"kin discrimination","type":"related"},{"name":"kin recognition","type":"broad"},{"name":"self recognition","type":"broad"}],"termid":"GO:0097656"}


id: PBO:0001489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline kinase (predicted)","termid":"PBO:0001489"}


id: PBO:0068497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 82, pseudogene","termid":"PBO:0068497"}


id: GO:2000509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of dendritic cell chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte chemotaxis","termid":"GO:0002689"},{"relation_name":"is_a","term_name":"negative regulation of mononuclear cell migration","termid":"GO:0071676"},{"relation_name":"is_a","term_name":"regulation of dendritic cell chemotaxis","termid":"GO:2000508"},{"relation_name":"negatively_regulates","term_name":"dendritic cell chemotaxis","termid":"GO:0002407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dendritic cell chemotaxis","termid":"GO:2000509"}


id: GO:0043960
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-erythro-3-methylmalyl-CoA = mesaconyl-CoA + H2O.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"L-erythro-3-methylmalyl-CoA dehydratase activity","termid":"GO:0043960"}


id: FYPO:0000941
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000934"},{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle pole body","termid":"FYPO:0000939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to mitotic spindle pole body","synonyms":[{"name":"abolished protein localization to spindle pole body during mitotic cell cycle","type":"related"},{"name":"protein absent from mitotic spindle pole body","type":"related"},{"name":"protein localisation to mitotic spindle pole body abolished","type":"exact"},{"name":"protein localization to mitotic SPB abolished","type":"exact"},{"name":"protein localization to mitotic spindle pole body abolished","type":"exact"},{"name":"protein localization to spindle pole body abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0000941"}


id: GO:1900365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of mRNA polyadenylation.","definition_xrefs":["GOC:se","GOC:TermGenie","PMID:15121841"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of mRNA polyadenylation (obsolete GO:1900365)","synonyms":[{"name":"activation of cleavage and polyadenylylation specificity factor activity","type":"narrow"},{"name":"activation of mRNA polyadenylation","type":"narrow"},{"name":"activation of mRNA polyadenylylation","type":"narrow"},{"name":"positive regulation of cleavage and polyadenylylation specificity factor activity","type":"narrow"},{"name":"positive regulation of mRNA polyadenylylation","type":"exact"}],"termid":"GO:1900365"}


id: GO:0033314
data:
  {"annotated_genes":["SJAG_03927","SJAG_02074","SJAG_01010","SJAG_02771","SJAG_02098","SJAG_02563","SJAG_01205","SJAG_03160","SJAG_01044","SJAG_04287","SJAG_01605","SJAG_04671","SJAG_03026","SJAG_00364","SJAG_02266","SJAG_01076","SJAG_03695"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72857,74071,76642,80677,81268,93243,95775,101003,101170,102356,108450,111160,113888,117919,118663,118968,119140],"is_not":false,"summary":null,"term":"GO:0033314"}]},"cv_name":"biological_process","definition":"A signal transduction process that contributes to a mitotic DNA replication checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication checkpoint signaling","termid":"GO:0000076"},{"relation_name":"is_a","term_name":"mitotic DNA integrity checkpoint signaling","termid":"GO:0044774"},{"relation_name":"is_a","term_name":"mitotic G2/M transition checkpoint","termid":"GO:0044818"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_01010":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01205":null,"SJAG_01605":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02563":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03160":null,"SJAG_03695":null,"SJAG_03927":null,"SJAG_04287":null,"SJAG_04671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0044772","GO:0023052","GO:0007049"],"is_obsolete":false,"name":"mitotic DNA replication checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0072459","GO:0031574","GO:0072446","GO:0072443"],"synonyms":[{"name":"S-M DNA replication checkpoint","type":"exact"},{"name":"S-M checkpoint","type":"exact"},{"name":"S-phase checkpoint","type":"broad"},{"name":"mitotic DNA replication checkpoint","type":"exact"},{"name":"mitotic cell cycle DNA replication checkpoint","type":"exact"},{"name":"signal transduction involved in S-M checkpoint","type":"exact"},{"name":"signal transduction involved in mitotic DNA replication checkpoint","type":"narrow"},{"name":"signal transduction involved in mitotic G2/M transition decatenation checkpoint","type":"related"}],"termid":"GO:0033314","terms_by_termid":{"GO:0033314":null}}


id: GO:0003128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the delineation of a specific region of the lateral mesoderm into the area in which the heart will develop.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of animal organ identity","termid":"GO:0010092"},{"relation_name":"part_of","term_name":"heart formation","termid":"GO:0060914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart field specification","termid":"GO:0003128"}


id: PBO:0083026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleted ORF; does not encode a protein; this ORF was removed when a sequence update created a stop codon after residue 23","termid":"PBO:0083026"}


id: GO:0071409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cycloheximide stimulus. Cycloheximide (actidione) is an antibiotic produced by some Streptomyces species which interferes with protein synthesis in eukaryotes.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cycloheximide","termid":"GO:0046898"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cycloheximide","synonyms":[{"name":"cellular response to actidione","type":"exact"}],"termid":"GO:0071409"}


id: PBO:0052167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium inwardly rectifying channel subfamily J member 15","termid":"PBO:0052167"}


id: GO:1904646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a amyloid-beta stimulus.","definition_xrefs":["PMID:23555824","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to amyloid-beta","termid":"GO:1904645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to amyloid-beta","synonyms":[{"name":"cellular response to beta-amyloid","type":"exact"},{"name":"cellular response to beta-amyloids","type":"related"}],"termid":"GO:1904646"}


id: GO:0018623
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoate + NADH + H+ + O2 = catechol + CO2 + NAD+.","definition_xrefs":["EC:1.14.12.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"benzoate 1,2-dioxygenase activity","secondary_identifiers":["UM-BBD_enzymeID:r0245","MetaCyc:BENZOATE-12-DIOXYGENASE-RXN","RHEA:12633"],"synonyms":[{"name":"benzoate dioxygenase activity","type":"related"},{"name":"benzoate hydroxylase activity","type":"related"},{"name":"benzoate,NADH:oxygen oxidoreductase (1,2-hydroxylating)","type":"related"},{"name":"benzoate,NADH:oxygen oxidoreductase (1,2-hydroxylating, decarboxylating)","type":"related"},{"name":"benzoic hydroxylase activity","type":"related"}],"termid":"GO:0018623"}


id: PBO:0042372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD200 like, pseudogene","termid":"PBO:0042372"}


id: MONDO:0010111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Odontotrichomelic syndrome is characterized by malformations of all four extremities, hypoplastic nails, ear anomalies, hypotrichosis, abnormal dentition, hyperhidrosis and nasolacrimal duct obstruction. So far, it has been described in less than 10 patients. Transmission is autosomal recessive.","definition_xrefs":["Orphanet:2723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"odontotrichomelic syndrome","secondary_identifiers":["GARD:2381","MEDGEN:443944","OMIM:273400","icd11.foundation:1999951139","SCTID:239028001","MESH:C535637","UMLS:C2930960"],"synonyms":[{"name":"Freire-Maia odontotrichomelic syndrome","type":"exact"},{"name":"Freire-Maia syndrome","type":"exact"},{"name":"odontotrichomelic hypohidrotic dysplasia","type":"exact"},{"name":"odontotrichomelic syndrome","type":"exact"},{"name":"tetramelic deficiencies, ectodermal dysplasia, deformed ears, and other abnormalities","type":"exact"}],"termid":"MONDO:0010111","xrefs":{"Monarch":{"xref_id":"0010111"}}}


id: PBO:0063652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 1 pseudogene 9","termid":"PBO:0063652"}


id: GO:0060749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the mammary gland alveolus over time, from its formation to its mature state. The mammary gland alveolus is a sac-like structure that is found in the mature gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"mammary gland lobule development","termid":"GO:0061377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland alveolus development","termid":"GO:0060749"}


id: GO:2000909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sterol import.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sterol transport","termid":"GO:0032371"},{"relation_name":"regulates","term_name":"sterol import","termid":"GO:0035376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of sterol import","synonyms":[{"name":"regulation of sterol influx","type":"exact"},{"name":"regulation of sterol uptake","type":"exact"}],"termid":"GO:2000909"}


id: PBO:0076390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tachykinin receptor 3","termid":"PBO:0076390"}


id: GO:2000861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of estrogen secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid hormone secretion","termid":"GO:2000831"},{"relation_name":"regulates","term_name":"estrogen secretion","termid":"GO:0035937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"regulation of estrogen secretion","synonyms":[{"name":"regulation of oestrogen secretion","type":"related"}],"termid":"GO:2000861"}


id: MONDO:0054716
data:
  {"annotated_genes":["SJAG_04070"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86853],"is_not":false,"summary":null,"term":"MONDO:0054716"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04070":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly 19, primary, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070281","OMIM:617800","MEDGEN:1616860","UMLS:C4540488","GARD:16253"],"synonyms":[{"name":"MCPH19","type":"related"},{"name":"microcephaly 19, PRIMARY, autosomal recessive","type":"related"},{"name":"primary autosomal recessive microcephaly 19","type":"related"}],"termid":"MONDO:0054716","terms_by_termid":{"MONDO:0054716":null},"xrefs":{"Monarch":{"xref_id":"0054716"}}}


id: GO:0101028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the surface tension of a liquid.","definition_xrefs":["PMID:20949060","GOC:sl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of liquid surface tension (obsolete GO:0101028)","synonyms":[{"name":"positive regulation of surface tension of a liquid","type":"exact"}],"termid":"GO:0101028"}


id: MONDO:0030118
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Silver-Russell syndrome","termid":"MONDO:0008394"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silver-russell syndrome 4","secondary_identifiers":["UMLS:C5394450","MEDGEN:1712866","GARD:18464","OMIM:618907"],"synonyms":[{"name":"SILVER-RUSSELL SYNDROME 4","type":"exact"},{"name":"SRS4","type":"exact"},{"name":"silver-russell syndrome 4","type":"exact"}],"termid":"MONDO:0030118","xrefs":{"Monarch":{"xref_id":"0030118"}}}


id: GO:0048223
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Network composed of hemicelluloses; members of a class of plant cell wall polysaccharide that cannot be extracted from the wall by hot water or chelating agents, but can be extracted by aqueous alkali. Includes xylan, glucuronoxylan, arabinoxylan, arabinogalactan II, glucomannan, xyloglucan and galactomannan.","definition_xrefs":["DOI:10.1016/j.foodchem.2008.11.065","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"primary cell wall","termid":"GO:0009530"},{"relation_name":"part_of","term_name":"secondary cell wall","termid":"GO:0009531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"hemicellulose network","termid":"GO:0048223"}


id: GO:1900503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellulosome assembly.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"cellulosome assembly","termid":"GO:0044575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of cellulosome assembly","termid":"GO:1900503"}


id: PR:O60168
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lcl3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endonuclease C19F8.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F8.04c","synonyms":[{"name":"Spom972h-lcl3","type":"exact"}],"termid":"PR:O60168"}


id: MONDO:0031083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 77","secondary_identifiers":["OMIM:620103","DOID:0070576","MEDGEN:1824018","UMLS:C5774245"],"synonyms":[{"name":"SPGF77","type":"exact"},{"name":"spermatogenic failure 77","type":"exact"}],"termid":"MONDO:0031083","xrefs":{"Monarch":{"xref_id":"0031083"}}}


id: MONDO:0018128
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Phalangeal microgeodic syndrome is a rare primary osteolysis characterized by multiple small osteolytic areas and sclerosis in the phalanges of one or both hands associated with swelling and redness of the phalanges. Condition is benign, self-limited and may be associated with cold exposure.","definition_xrefs":["Orphanet:352636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary osteolysis","termid":"MONDO:0019707"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phalangeal microgeodic syndrome","secondary_identifiers":["GARD:21524","MEDGEN:1658987","UMLS:C4749465"],"synonyms":[{"name":"phalangeal osteolysis","type":"exact"}],"termid":"MONDO:0018128","xrefs":{"Monarch":{"xref_id":"0018128"}}}


id: PBO:0043757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 8A","termid":"PBO:0043757"}


id: PBO:0060790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase core subunit S1","termid":"PBO:0060790"}


id: FYPO:0008407
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endoplasmic reticulum-mitochondrial contact site is decreased, and some of the protein is localized to the mitochondrion instead.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to endoplasmic reticulum during vegetative growth","termid":"FYPO:0003777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to endoplasmic reticulum-mitochondrial contact site with increased localization to mitochondrial matrix","termid":"FYPO:0008407"}


id: MONDO:0002271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the colon","direct_ancestors":[{"relation_name":"is_a","term_name":"colon carcinoma","termid":"MONDO:0002032"},{"relation_name":"is_a","term_name":"colorectal adenocarcinoma","termid":"MONDO:0005008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"colon adenocarcinoma","secondary_identifiers":["NCIT:C4349","DOID:234","EFO:1001949","ONCOTREE:COAD","UMLS:C0338106","MEDGEN:137834"],"synonyms":[{"name":"COAD","type":"related"},{"name":"adenocarcinoma - colon","type":"exact"},{"name":"adenocarcinoma of colon","type":"exact"},{"name":"adenocarcinoma of the colon","type":"exact"},{"name":"colon adenocarcinoma","type":"exact"},{"name":"colonic adenocarcinoma","type":"exact"}],"termid":"MONDO:0002271","xrefs":{"Monarch":{"xref_id":"0002271"}}}


id: PBO:0058285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4661","termid":"PBO:0058285"}


id: PBO:0082826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved phosphatase acting as a metabolite repair enzyme; shows specific dephosphorylating activity on two side-products of central carbohydrate metabolism, 2-phosphoglycolate and 4-phosphoerythronate; alkaline phosphatase specific for p-nitrophenyl phosphate; also has protein phosphatase activity; human ortholog PGP shows similar substrate specificity, deletion causes similar metabolite accumulation phenotypes, suggesting conserved role in eliminating glycolytic byproducts","termid":"PBO:0082826"}


id: PBO:0043583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XV alpha 1 chain","termid":"PBO:0043583"}


id: GO:0002520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an organismal system whose objective is to provide calibrated responses by an organism to a potential internal or invasive threat, over time, from its formation to the mature structure. A system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a given biological process.","definition_xrefs":["GOC:dph","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune system development","termid":"GO:0002520"}


id: PATO:0000069
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the whether the bearer differs from normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative","termid":"PATO:0000068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deviation(from_normal)","termid":"PATO:0000069"}


id: MONDO:0020055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal uniparental disomy (obsolete MONDO:0020055)","secondary_identifiers":["Orphanet:98152"],"termid":"MONDO:0020055","xrefs":{"Monarch":{"xref_id":"0020055"}}}


id: GO:0044210
data:
  {"annotated_genes":["SJAG_05024"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64193],"is_not":false,"summary":null,"term":"GO:0044210"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cytidine 5'-triphosphate (CTP) from simpler components.","definition_xrefs":["GOC:ecd","GOC:jl","PMID:11912132","PMID:18439916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CTP biosynthetic process","termid":"GO:0006241"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"'de novo' CTP biosynthetic process","references_by_uniquename":{"GO_REF:0000041":null},"synonyms":[{"name":"'de novo' cytidine 5'-triphosphate biosynthetic process","type":"exact"}],"termid":"GO:0044210","terms_by_termid":{"GO:0044210":null}}


id: SO:0001311
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N6_N6_dimethyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_N6_dimethyladenosine","secondary_identifiers":["RNAMOD:080"],"synonyms":[{"name":"N6,N6-dimethyladenosine","type":"exact"},{"name":"m62A","type":"exact"}],"termid":"SO:0001311"}


id: GO:1901620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of smoothened signaling pathway involved in dorsal/ventral neural tube patterning.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smoothened signaling pathway","termid":"GO:0008589"},{"relation_name":"regulates","term_name":"smoothened signaling pathway involved in dorsal/ventral neural tube patterning","termid":"GO:0060831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","synonyms":[{"name":"regulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"regulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"regulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"}],"termid":"GO:1901620"}


id: GO:0061478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a platelet aggregation inhibitor stimulus.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to platelet aggregation inhibitor","termid":"GO:0061478"}


id: MONDO:0010216
data:
  {"annotated_genes":["SJAG_02031"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88379],"is_not":false,"summary":null,"term":"MONDO:0010216"}]},"cv_name":"mondo","definition":"Any xeroderma pigmentosum in which the cause of the disease is a mutation in the ERCC5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"COFS syndrome","termid":"MONDO:0008926"},{"relation_name":"is_a","term_name":"xeroderma pigmentosum-Cockayne syndrome complex","termid":"MONDO:0016354"},{"relation_name":"is_a","term_name":"xeroderma pigmentosum","termid":"MONDO:0019600"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02031":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328","MONDO:0021190","MONDO:0006025","MONDO:0005093"],"is_obsolete":false,"name":"xeroderma pigmentosum group G","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C3969","UMLS:C0268141","MESH:C562593","Orphanet:276267","OMIM:278780","GARD:5629","SCTID:36454001","MEDGEN:75657","DOID:0110849"],"synonyms":[{"name":"ERCC5 xeroderma pigmentosum","type":"exact"},{"name":"XP group G","type":"exact"},{"name":"XP, Group G","type":"related"},{"name":"XP-G","type":"exact"},{"name":"XP7","type":"exact"},{"name":"XPG","type":"exact"},{"name":"xeroderma pigmentosum 7","type":"related"},{"name":"xeroderma pigmentosum VII","type":"exact"},{"name":"xeroderma pigmentosum caused by mutation in ERCC5","type":"exact"},{"name":"xeroderma pigmentosum complementation group G","type":"related"},{"name":"xeroderma pigmentosum group G","type":"exact"},{"name":"xeroderma pigmentosum group type G","type":"exact"},{"name":"xeroderma pigmentosum type 7","type":"related"},{"name":"xeroderma pigmentosum, complementation group G","type":"related"},{"name":"xeroderma pigmentosum, complementation group type G","type":"exact"},{"name":"xeroderma pigmentosum, group G","type":"exact"},{"name":"xeroderma pigmentosum, group G/Cockayne syndrome","type":"exact"},{"name":"xeroderma pigmentosum, type G/Cockayne syndrome","type":"related"}],"termid":"MONDO:0010216","terms_by_termid":{"MONDO:0010216":null},"xrefs":{"Monarch":{"xref_id":"0010216"}}}


id: MONDO:1010334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinitis pigmentosa that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal degeneration, non-human animal","termid":"MONDO:1010326"},{"relation_name":"is_a","term_name":"perceptual disorders, non-human animal","termid":"MONDO:1011343"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"},{"relation_name":"is_a","term_name":"inborn errors of metabolism, non-human animal","termid":"MONDO:1012979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinitis pigmentosa, non-human animal","secondary_identifiers":["OMIA:001413"],"termid":"MONDO:1010334","xrefs":{"Monarch":{"xref_id":"1010334"}}}


id: GO:0002178
data:
  {"annotated_genes":["SJAG_02706","SJAG_02305","SJAG_04451","SJAG_00880","SJAG_04178","SJAG_01857","SJAG_04550","SJAG_01349"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76610,111992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031211"},{"annotations":[80659,95361,98712,107362,107818,74834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017059"}]},"cv_name":"cellular_component","definition":"A protein complex with palmitoyltransferase activity.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00880":null,"SJAG_01349":null,"SJAG_01857":null,"SJAG_02305":null,"SJAG_02706":null,"SJAG_04178":null,"SJAG_04451":null,"SJAG_04550":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"palmitoyltransferase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0002178","terms_by_termid":{"GO:0017059":null,"GO:0031211":null}}


id: PBO:0059669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 35","termid":"PBO:0059669"}


id: MONDO:0044641
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"epilepsy","termid":"MONDO:0005027"},{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial monosomy of the long arm of chromosome 9","termid":"MONDO:0016908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005328"],"is_obsolete":false,"name":"9q33.3q34.11 microdeletion syndrome","secondary_identifiers":["GARD:22009","Orphanet:495818","UMLS:C5680085","MEDGEN:1811810"],"synonyms":[{"name":"9q33.3-q34.11 microdeletion syndrome","type":"exact"},{"name":"Del(9)(q33.3q34.11)","type":"exact"},{"name":"deletion 9q33.3q34.11","type":"exact"},{"name":"monosomy 9q33.3-q34.11","type":"exact"},{"name":"monosomy 9q33.3q34.11","type":"exact"}],"termid":"MONDO:0044641","xrefs":{"Monarch":{"xref_id":"0044641"}}}


