# terms

id: GO:0001540
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an amyloid-beta peptide/protein.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"peptide binding","termid":"GO:0042277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"amyloid-beta binding","synonyms":[{"name":"beta-amyloid binding","type":"exact"}],"termid":"GO:0001540"}


id: PBO:0056478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrilin 1","termid":"PBO:0056478"}


id: PBO:0079629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2Q1 antisense RNA 1","termid":"PBO:0079629"}


id: PBO:0077900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptase beta 2","termid":"PBO:0077900"}


id: PBO:0029838
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_cytoskeleton","termid":"PBO:0029838"}


id: MONDO:0016358
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Limited cutaneous systemic sclerosis (lcSSc) is a subtype of systemic sclerosis (SSc) characterized by the association of Raynaud's phenomenon with skin fibrosis limited to the hands, face, feet and forearms.","definition_xrefs":["Orphanet:220402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"systemic sclerosis","termid":"MONDO:0005100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"limited cutaneous systemic sclerosis","secondary_identifiers":["UMLS:C0748540","MEDGEN:148187","NANDO:1201011","SCTID:298285004","SCTID:299276009","MESH:D045745","GARD:1053","DOID:1577"],"synonyms":[{"name":"limited cutaneous systemic scleroderma","type":"exact"},{"name":"limited scleroderma","type":"exact"},{"name":"systemic sclerosis, limited","type":"exact"}],"termid":"MONDO:0016358","xrefs":{"Monarch":{"xref_id":"0016358"}}}


id: GO:0140818
data:
  {"annotated_genes":["SJAG_04488"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100798],"is_not":false,"summary":null,"term":"GO:0140818"}]},"cv_name":"molecular_function","definition":"A 5'-end triphospho-[mRNA] + H2O = a 5'-end diphospho-[mRNA] + H+ + phosphate.","definition_xrefs":["PMID:9473487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04488":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0140098","GO:0003674"],"is_obsolete":false,"name":"mRNA 5'-triphosphate monophosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:POLYNUCLEOTIDE-5-PHOSPHATASE-RXN","EC:3.6.1.74","RHEA:67004"],"synonyms":[{"name":"mRNA 5'-phosphatase activity","type":"exact"}],"termid":"GO:0140818","terms_by_termid":{"GO:0140818":null}}


id: PBO:0051694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80 complex subunit C","termid":"PBO:0051694"}


id: PBO:0051046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 1-20","termid":"PBO:0051046"}


id: GO:0005280
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: amino acid(out) + H+(out) = amino acid(in) + H+(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:monoatomic cation symporter activity","termid":"GO:0005416"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"amino acid:proton symporter activity","secondary_identifiers":["Reactome:R-HSA-8875623"],"synonyms":[{"name":"cation/amino acid symporter","type":"broad"},{"name":"hydrogen:amino acid symporter activity","type":"exact"}],"termid":"GO:0005280"}


id: PBO:0065430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 1 pseudogene 3","termid":"PBO:0065430"}


id: GO:0070666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mast cell proliferation.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte proliferation","termid":"GO:0070663"},{"relation_name":"regulates","term_name":"mast cell proliferation","termid":"GO:0070662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mast cell proliferation","termid":"GO:0070666"}


id: PBO:0064434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNP pseudogene 1","termid":"PBO:0064434"}


id: MONDO:0002734
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An anal adenocarcinoma characterized by the presence of mucoid stroma formation.","definition_xrefs":["NCIT:C5606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anus adenocarcinoma","termid":"MONDO:0002652"},{"relation_name":"is_a","term_name":"rectum mucinous adenocarcinoma","termid":"MONDO:0002748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"anal mucinous adenocarcinoma","secondary_identifiers":["DOID:3691","MEDGEN:233980","UMLS:C1332272"],"synonyms":[{"name":"anal colloid adenocarcinoma","type":"exact"},{"name":"anal colloidal adenocarcinoma","type":"exact"},{"name":"anal mucinous adenocarcinoma","type":"exact"},{"name":"anus mucinous adenocarcinoma","type":"exact"},{"name":"colloid adenocarcinoma of anus","type":"exact"},{"name":"colloid adenocarcinoma of the anus","type":"exact"},{"name":"colloidal adenocarcinoma of anus","type":"exact"},{"name":"colloidal adenocarcinoma of the anus","type":"exact"},{"name":"mucinous adenocarcinoma of anus","type":"exact"},{"name":"mucinous adenocarcinoma of the anus","type":"exact"}],"termid":"MONDO:0002734","xrefs":{"Monarch":{"xref_id":"0002734"}}}


id: PBO:0061364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 24","termid":"PBO:0061364"}


id: MONDO:0014420
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Short stature due to primary acid-labile subunit (ALS) deficiency is characterized by moderate postnatal growth deficit, markedly low circulating levels of insulin-like growth factor 1 (IGF-1) and insulin-like growth factor binding protein 3 (IGFBP-3), and hyperinsulinemia, in the absence of growth hormone (GH) deficiency or GH insensitivity.","definition_xrefs":["Orphanet:140941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"growth hormone insensitivity syndrome","termid":"MONDO:0015892"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature due to primary acid-labile subunit deficiency","secondary_identifiers":["GARD:16964","SCTID:721074002","MEDGEN:859716","UMLS:C3900122","icd11.foundation:29735645","OMIM:615961"],"synonyms":[{"name":"ACLSD","type":"related"},{"name":"acid-labile SUBUNIT deficiency","type":"related"},{"name":"acid-labile subunit, deficiency of","type":"exact"}],"termid":"MONDO:0014420","xrefs":{"Monarch":{"xref_id":"0014420"}}}


id: PBO:0039640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde oxidase 3, pseudogene","termid":"PBO:0039640"}


id: PBO:0067646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 820, pseudogene","termid":"PBO:0067646"}


id: GO:0007578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A haploid's inability to mate due to the loss of silencing at the mating-type loci, resulting in expression of both of the normally silent mating-type cassettes.","definition_xrefs":["GOC:sgd_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete aging dependent sterility (sensu Saccharomyces) (obsolete GO:0007578)","synonyms":[{"name":"aging dependent sterility (sensu Saccharomyces)","type":"exact"}],"termid":"GO:0007578"}


id: MONDO:0009017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corneal degeneration, band-shaped spheroid","secondary_identifiers":["UMLS:C1857571","MEDGEN:347489","OMIM:217520"],"synonyms":[{"name":"corneal degeneration, band-shaped spheroid","type":"exact"}],"termid":"MONDO:0009017","xrefs":{"Monarch":{"xref_id":"0009017"}}}


id: GO:0001403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A growth pattern exhibited by budding haploid cells under certain growth conditions, in which cells retain the typical axial budding pattern of haploids, but become elongated and fail to separate after division; during growth on a solid substrate, this results in penetration of cells into the agar medium. An example of this process is found in Saccharomyces cerevisiae.","definition_xrefs":["PMID:9728395","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"invasive filamentous growth","termid":"GO:0036267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"invasive growth in response to glucose limitation","synonyms":[{"name":"colony morphology","type":"related"}],"termid":"GO:0001403"}


id: GO:0071124
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha1-beta1 integrin complex bound to tyrosine-protein phosphatase non-receptor type 2.","definition_xrefs":["PMID:15592458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"alpha1-beta1 integrin-tyrosine-protein phosphatase non-receptor type 2 complex","synonyms":[{"name":"ITGA1-ITGB1-PTPN2 complex","type":"narrow"}],"termid":"GO:0071124"}


id: PR:Q09892
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitogen-activated protein kinase HOG1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PomBase:MAH","PMID:7501024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitogen-activated protein kinase HOG1","termid":"PR:000027499"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase sty1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24B11.06c","secondary_identifiers":["UniProtKB:Q09892","PR:000027500"],"synonyms":[{"name":"HOG1","type":"related"},{"name":"PHH1","type":"related"},{"name":"SPAC24B11.06C","type":"related"},{"name":"SPC1","type":"related"},{"name":"Spom972h-HOG1","type":"exact"}],"termid":"PR:Q09892"}


id: PBO:0054341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1734","termid":"PBO:0054341"}


id: GO:0102294
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholesterol + NAD+ = cholest-5-en-3-one + NADH + H+.","definition_xrefs":["RHEA:35459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-beta-hydroxy-Delta5-steroid dehydrogenase (NAD+) activity","termid":"GO:0003854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"cholesterol dehydrogenase (NAD+) activity","secondary_identifiers":["MetaCyc:RXN-12693"],"termid":"GO:0102294"}


id: GO:0003296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that contributes to the reorganization of tissue resulting in the maturation of the atrial ventricular junction.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in heart morphogenesis","termid":"GO:0003278"},{"relation_name":"part_of","term_name":"atrial ventricular junction remodeling","termid":"GO:0003294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in atrial ventricular junction remodeling","synonyms":[{"name":"apoptosis involved in atrial ventricular junction remodelling","type":"exact"},{"name":"apoptosis involved in atrio-ventricular junction remodeling","type":"exact"},{"name":"apoptosis involved in atrio-ventricular junction remodelling","type":"exact"},{"name":"apoptosis involved in atrioventricular junction remodeling","type":"exact"},{"name":"apoptosis involved in atrioventricular junction remodelling","type":"exact"}],"termid":"GO:0003296"}


id: PBO:0090369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi coiled-coil protein Tmf1","termid":"PBO:0090369"}


id: PBO:0066247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif single stranded interacting protein 3","termid":"PBO:0066247"}


id: PBO:0091832
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae HAP5","termid":"PBO:0091832"}


id: MONDO:0012219
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spondyloepiphyseal dysplasia with congenital joint dislocations","termid":"MONDO:0007738"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia tarda","termid":"MONDO:0019667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepiphyseal dysplasia tarda, autosomal recessive, Leroy-Spranger type","secondary_identifiers":["UMLS:C1836584","DOID:0112291","MEDGEN:373126","MESH:C563772","OMIM:609223"],"synonyms":[{"name":"spondyloepiphyseal dysplasia tarda, autosomal recessive, Leroy-Spranger type","type":"exact"}],"termid":"MONDO:0012219","xrefs":{"Monarch":{"xref_id":"0012219"}}}


id: MONDO:0975846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"congenital disorder of glycosylation, type 1DD","secondary_identifiers":["OMIM:301133"],"termid":"MONDO:0975846","xrefs":{"Monarch":{"xref_id":"0975846"}}}


id: PBO:0034470
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_cell_periphery","termid":"PBO:0034470"}


id: PBO:0048332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 43","termid":"PBO:0048332"}


id: GO:0075018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of symbiont appressorium formation.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of appressorium formation","termid":"GO:0075017"},{"relation_name":"positively_regulates","term_name":"appressorium formation","termid":"GO:0075016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of appressorium formation","synonyms":[{"name":"positive regulation of appressorium formation on or near host","type":"related"}],"termid":"GO:0075018"}


id: MONDO:0001681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cystits which involves inflammation and formation of a dense fibrous false membrane on the mucous membrane of the bladder.","definition_xrefs":["DOID:13306","PMID:18889690"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystitis","termid":"MONDO:0006032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphtheritic cystitis","secondary_identifiers":["MEDGEN:509093","SCTID:48278001","UMLS:C0152954","icd11.foundation:943460530","ICD9:032.84","ICD10CM:A36.85"],"termid":"MONDO:0001681","xrefs":{"Monarch":{"xref_id":"0001681"}}}


id: PBO:0067594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 756, pseudogene","termid":"PBO:0067594"}


id: GO:0008943
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: glyceraldehyde 3-phosphate + phosphate + NAD(P)+ = 3-phospho-D-glyceroyl-phosphate + NAD(P)H + H+, and glyceraldehyde 3-phosphate + H2O + NAD(P)+ = 3-phospho-D-glycerate + NAD(P)H + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete glyceraldehyde-3-phosphate dehydrogenase activity (obsolete GO:0008943)","synonyms":[{"name":"glyceraldehyde-3-phosphate dehydrogenase activity","type":"exact"}],"termid":"GO:0008943"}


id: GO:0033226
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 2-aminoethylphosphonate.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"2-aminoethylphosphonate binding","synonyms":[{"name":"2-phosphonoethylamine binding","type":"exact"},{"name":"ciliatine binding","type":"exact"}],"termid":"GO:0033226"}


id: MONDO:0016564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"PSP-progressive non fluent aphasia (PSP-PNFA) is an atypical variant of progressive supranuclear palsy (PSP), a rare late-onset neurodegenerative disease. Unlike classic PSP (Richardson syndrome) patients present with an isolated speech production problem years before developing other motor features of PSP.","definition_xrefs":["Orphanet:240112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atypical progressive supranuclear palsy syndrome","termid":"MONDO:0020488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"progressive supranuclear palsy-progressive non-fluent aphasia syndrome","secondary_identifiers":["GARD:20649","UMLS:C5679850","MEDGEN:1842806"],"synonyms":[{"name":"PSP-AOS","type":"exact"},{"name":"PSP-PNFA","type":"exact"},{"name":"progressive supranuclear palsy-apraxia of speech syndrome","type":"exact"}],"termid":"MONDO:0016564","xrefs":{"Monarch":{"xref_id":"0016564"}}}


id: GO:0030883
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an endogenous cellular lipid antigen.","definition_xrefs":["PMID:14500461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid antigen binding","termid":"GO:0030882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0008289","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"endogenous lipid antigen binding","termid":"GO:0030883"}


id: PBO:0054842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2256","termid":"PBO:0054842"}


id: PBO:0062324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 6","termid":"PBO:0062324"}


id: PBO:0078575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif-containing 51J, pseudogene","termid":"PBO:0078575"}


id: GO:0090663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of the peptide neurotransmitter galanin binding to a cell surface receptor.","definition_xrefs":["PMID:25691535","GOC:lb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide signaling pathway","termid":"GO:0007218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"galanin-activated signaling pathway","synonyms":[{"name":"galanin signaling pathway","type":"related"},{"name":"galanin signalling pathway","type":"related"},{"name":"galanin-activated signalling pathway","type":"exact"}],"termid":"GO:0090663"}


id: GO:0030701
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + [dinitrogen reductase] = nicotinamide + ADP-D-ribosyl-[dinitrogen reductase].","definition_xrefs":["EC:2.4.2.37"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"NAD+-dinitrogen-reductase ADP-D-ribosyltransferase activity","secondary_identifiers":["RHEA:18077","MetaCyc:2.4.2.37-RXN"],"synonyms":[{"name":"ADP-ribosyltransferase activity","type":"broad"},{"name":"NAD+:[dinitrogen reductase] (ADP-D-ribosyl)transferase activity","type":"related"},{"name":"NAD--azoferredoxin (ADP-ribose)transferase activity","type":"related"},{"name":"NAD-azoferredoxin (ADPribose)transferase activity","type":"related"},{"name":"NAD-dinitrogen-reductase ADP-D-ribosyltransferase activity","type":"exact"}],"termid":"GO:0030701"}


id: RO:0003311
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between a condition (a phenotype or disease) and an entity (e.g. a chemical, environmental exposure, or some form of genetic variation) where some or all aspects of the condition are worsened by the presence of the entity.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"RO:0002410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condition_exacerbated_by","termid":"RO:0003311"}


id: PBO:0046190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELMO domain containing 1","termid":"PBO:0046190"}


id: PBO:0043372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clustered mitochondria homolog pseudogene 2","termid":"PBO:0043372"}


id: PBO:0080996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 32","termid":"PBO:0080996"}


id: MONDO:0017409
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection with the Cytomegalovirus that is present from birth.","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"cytomegalovirus infection","termid":"MONDO:0005132"},{"relation_name":"is_a","term_name":"infectious embryofetopathy","termid":"MONDO:0016511"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fetal cytomegalovirus syndrome","secondary_identifiers":["NCIT:C122427","UMLS:C0349499","Orphanet:294","SCTID:276701009","icd11.foundation:1515465998","MEDGEN:578789","GARD:1480","NANDO:2200891"],"synonyms":[{"name":"CMV antenatal infection","type":"related"},{"name":"antenatal CMV infection","type":"exact"},{"name":"antenatal cytomegalovirus infection","type":"exact"},{"name":"congenital Cytomegaloviral infection","type":"exact"},{"name":"congenital cytomegalovirus","type":"related"},{"name":"mother-to-child transmission of cytomegalovirus syndrome","type":"exact"}],"termid":"MONDO:0017409","xrefs":{"Monarch":{"xref_id":"0017409"}}}


id: PBO:0083082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Divalent metal ion transporter involved in manganese homeostasis; has broad specificity for di-valent and tri-valent metals; post-translationally regulated by levels of metal ions; member of the Nramp family of metal transport proteins","termid":"PBO:0083082"}


id: GO:0099076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Vesicle-mediated transport of cargo from the mitochondrion to the peroxisome, mediated by a mitochondrion-derived vesicle.","definition_xrefs":["GOC:pad","GOC:PARL-UCL","GOC:bc","PMID:20619655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrion-derived vesicle mediated transport","termid":"GO:0099075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192","GO:0051179"],"is_obsolete":false,"name":"mitochondrion to peroxisome vesicle-mediated transport","synonyms":[{"name":"mitochondrion to peroxisome transport","type":"exact"}],"termid":"GO:0099076"}


id: MONDO:0003113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor that develops as a primary tumor in an anatomic site other than the testis or ovary.","definition_xrefs":["NCIT:C8881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant germ cell tumor","termid":"MONDO:0006290"},{"relation_name":"is_a","term_name":"extragonadal germ cell tumor","termid":"MONDO:0018201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"extragonadal germ cell cancer","secondary_identifiers":["DOID:4717","MEDGEN:235292","UMLS:C1334581"],"synonyms":[{"name":"extragonadal germ cell malignant tumor","type":"exact"},{"name":"extragonadal germ cell malignant tumour","type":"exact"},{"name":"extragonadal germ cell tumor, malignant","type":"exact"},{"name":"malignant extragonadal germ cell tumor","type":"exact"},{"name":"malignant extragonadal germ cell tumour","type":"exact"},{"name":"malignant neoplasm of extragonadal germ cell","type":"exact"},{"name":"malignant neoplasm of the extragonadal germ cell","type":"exact"},{"name":"malignant tumor of extragonadal germ cell","type":"exact"},{"name":"malignant tumor of the extragonadal germ cell","type":"exact"},{"name":"malignant tumour of extragonadal germ cell","type":"exact"},{"name":"malignant tumour of the extragonadal germ cell","type":"exact"},{"name":"tumor of extragonadal germ cell","type":"related"},{"name":"tumour of extragonadal germ cell","type":"related"}],"termid":"MONDO:0003113","xrefs":{"Monarch":{"xref_id":"0003113"}}}


id: PBO:0035747
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cytoplasmic_microtubules_nucleated_from_eMTOC_present_in_decreased_numbers","termid":"PBO:0035747"}


id: GO:1903036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to wounding.","definition_xrefs":["GOC:kmv","GO_REF:0000058","PMID:19164535","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to wounding","termid":"GO:1903034"},{"relation_name":"positively_regulates","term_name":"response to wounding","termid":"GO:0009611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to wounding","synonyms":[{"name":"activation of physiological response to wounding","type":"narrow"},{"name":"activation of response to wounding","type":"narrow"},{"name":"positive regulation of physiological response to wounding","type":"exact"},{"name":"up regulation of physiological response to wounding","type":"exact"},{"name":"up regulation of response to wounding","type":"exact"},{"name":"up-regulation of physiological response to wounding","type":"exact"},{"name":"up-regulation of response to wounding","type":"exact"},{"name":"upregulation of physiological response to wounding","type":"exact"},{"name":"upregulation of response to wounding","type":"exact"}],"termid":"GO:1903036"}


id: GO:1900528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of cell shape that is involved in G1 to G0 transition.","definition_xrefs":["GOC:TermGenie","PMID:19366728","GOC:al"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cell shape involved in G1 to G0 transition (obsolete GO:1900528)","synonyms":[{"name":"regulation of cell shape involved in G1 to G0 transition","type":"exact"},{"name":"regulation of cell shape involved in G1/G0 transition","type":"exact"},{"name":"regulation of cell shape involved in cell cycle quiescence","type":"related"},{"name":"regulation of cell shape involved in establishment of cell quiescence","type":"exact"},{"name":"regulation of cell shape involved in stationary phase","type":"related"}],"termid":"GO:1900528"}


id: MONDO:0001463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the splenic flexure of colon.","direct_ancestors":[{"relation_name":"is_a","term_name":"descending colon cancer","termid":"MONDO:0001462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"splenic flexure cancer","secondary_identifiers":["MEDGEN:509294","UMLS:C0153440","ICD10CM:C18.5","SCTID:363413005","DOID:12191","ICD9:153.7"],"synonyms":[{"name":"Ca splenic flexure - colon","type":"exact"},{"name":"cancer of splenic flexure of colon","type":"exact"},{"name":"malignant neoplasm of splenic flexure","type":"exact"},{"name":"malignant neoplasm of splenic flexure of colon","type":"exact"},{"name":"malignant splenic flexure of colon neoplasm","type":"exact"},{"name":"malignant tumor of splenic flexure","type":"exact"},{"name":"malignant tumour of splenic flexure","type":"exact"},{"name":"splenic flexure of colon cancer","type":"exact"}],"termid":"MONDO:0001463","xrefs":{"Monarch":{"xref_id":"0001463"}}}


id: GO:0015653
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glycine betaine(out) + H+(out) = glycine betaine(in) + H+(in).","definition_xrefs":["TC:2.A.15.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine transmembrane transporter activity","termid":"GO:0015199"},{"relation_name":"is_a","term_name":"quaternary ammonium group:proton symporter activity","termid":"GO:0015652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"glycine betaine:proton symporter activity","synonyms":[{"name":"glycine betaine:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015653"}


id: FYPO:0007756
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which homologous chromosome segregation is abnormal, and the meiotic spindle collapses.","definition_xrefs":["PomBase:mah","PMID:32723864"],"direct_ancestors":[{"relation_name":"has_part","term_name":"meiotic spindle collapse","termid":"FYPO:0007083"},{"relation_name":"is_a","term_name":"abnormal homologous chromosome segregation","termid":"FYPO:0004159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abnormal homologous chromosome segregation with collapsed spindle","synonyms":[{"name":"abnormal chromosome disjunction at meiosis I with collapsed spindle","type":"exact"},{"name":"abnormal chromosome segregation during meiosis I with collapsed spindle","type":"exact"},{"name":"abnormal homologous chromosome disjunction with collapsed spindle","type":"exact"},{"name":"abnormal homologous chromosome segregation with collapsed spindle during meiosis I","type":"exact"},{"name":"abnormal homologous chromosome segregation with meiosis I spindle collapse","type":"exact"},{"name":"abnormal homologous chromosome segregation with spindle collapse","type":"exact"},{"name":"chromosome missegregation with collapsed spindle during meiosis I","type":"related"},{"name":"homologous chromosome missegregation with collapsed spindle","type":"related"},{"name":"meiotic chromosome missegregation with collapsed spindle","type":"related"}],"termid":"FYPO:0007756"}


id: MONDO:0010137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial thyroid dyshormonogenesis in which the cause of the disease is a mutation in the DUOXA2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial thyroid dyshormonogenesis","termid":"MONDO:0010132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"thyroid dyshormonogenesis 5","secondary_identifiers":["MESH:C562771","DOID:0112184","OMIM:274900","MEDGEN:87430","UMLS:C0342196","SCTID:63127008","GARD:18192"],"synonyms":[{"name":"DUOXA2 familial thyroid dyshormonogenesis","type":"exact"},{"name":"TDH5","type":"exact"},{"name":"familial thyroid dyshormonogenesis caused by mutation in DUOXA2","type":"exact"},{"name":"hypothyroidism, congenital, due to dyshormonogenesis, 5","type":"exact"},{"name":"thyroid dyshormonogenesis 5","type":"exact"},{"name":"thyroid dyshormonogenesis type 5","type":"exact"},{"name":"thyroid hormonogenesis, genetic defect in, 5","type":"exact"}],"termid":"MONDO:0010137","xrefs":{"Monarch":{"xref_id":"0010137"}}}


id: PBO:0089431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosyltransferase complex subunit Alg1","termid":"PBO:0089431"}


id: FYPO:0005140
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the repair of double-strand breaks formed as part of meiotic recombination does not occur.","definition_xrefs":["PMID:15238514","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination double-strand break repair","termid":"FYPO:0005139"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000293","FYPO:0000298","FYPO:0005447","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abolished meiotic recombination double-strand break repair","synonyms":[{"name":"abolished DSB repair involved in reciprocal meiotic recombination","type":"exact"},{"name":"abolished double-strand break repair during meiotic recombination","type":"exact"},{"name":"abolished double-strand break repair involved in reciprocal meiotic recombination","type":"exact"},{"name":"meiotic recombination double-strand break repair abolished","type":"exact"}],"termid":"FYPO:0005140"}


id: MONDO:0957458
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dermatomyositis","termid":"MONDO:0016367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005093"],"is_obsolete":false,"name":"adermatopathic dermatomyositis","secondary_identifiers":["UMLS:C5816708","Orphanet:645626","MEDGEN:1843427"],"termid":"MONDO:0957458","xrefs":{"Monarch":{"xref_id":"0957458"}}}


id: PBO:0017697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylceramide biosynthesis protein Cwh43 (predicted)","termid":"PBO:0017697"}


id: PR:O74959
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A retinol dehydrogenase 13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C736.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC736.13","secondary_identifiers":["UniProtKB:O74959"],"synonyms":[{"name":"Spom972h-RDH13","type":"exact"}],"termid":"PR:O74959"}


id: GO:0050526
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + poly[(R)-3-hydroxybutanoate](n) = poly[(R)-3-hydroxybutanoate](x) + poly[(R)-3-hydroxybutanoate](n-x); x is 1-5.","definition_xrefs":["MetaCyc:3.1.1.75-RXN","EC:3.1.1.75"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"poly(3-hydroxybutyrate) depolymerase activity","secondary_identifiers":["RHEA:11248"],"synonyms":[{"name":"PHB depolymerase activity","type":"related"},{"name":"poly((R)-hydroxyalkanoic acid) depolymerase activity","type":"broad"},{"name":"poly(3HB) depolymerase activity","type":"related"},{"name":"poly(HA(SCL)) depolymerase activity","type":"related"},{"name":"poly(HA) depolymerase activity","type":"related"},{"name":"poly(HASCL) depolymerase activity","type":"related"},{"name":"poly[(R)-3-hydroxybutyrate] hydrolase activity","type":"related"},{"name":"poly[(R)-hydroxyalkanoic acid] depolymerase","type":"broad"}],"termid":"GO:0050526"}


id: PR:000025003
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mfm1 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:MSY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-factor precursor mfm1","pombase_gene_id":"SPAPB8E5.05","synonyms":[{"name":"mfm1","type":"exact"}],"termid":"PR:000025003"}


id: MONDO:0009237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperplasia characterized by the presence of a focal proliferation of epithelial cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"hyperplasia","termid":"MONDO:0005043"},{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focal epithelial hyperplasia","secondary_identifiers":["MEDGEN:60066","OMIM:229045","ICD9:528.79","EFO:0007275","MESH:D017573","DOID:5362","NCIT:C97083","UMLS:C0206067","SCTID:6121001"],"synonyms":[{"name":"FEH, oral","type":"related"},{"name":"focal epithelial hyperplasia, oral","type":"related"},{"name":"heck disease","type":"exact"},{"name":"heck's disease","type":"exact"},{"name":"multifocal epithelial hyperplasia","type":"exact"}],"termid":"MONDO:0009237","xrefs":{"Monarch":{"xref_id":"0009237"}}}


id: PBO:0080147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vav guanine nucleotide exchange factor 3","termid":"PBO:0080147"}


id: MONDO:0005546
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic disorder of unknown etiology characterized by pain, stiffness, and tenderness in the muscles of neck, shoulders, back, hips, arms, and legs. Other signs and symptoms include headaches, fatigue, sleep disturbances, and painful menstruation.","definition_xrefs":["NCIT:C87497"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"myositis disease","termid":"MONDO:0021167"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"chronic pain syndrome","termid":"MONDO:0024317"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibromyalgia","secondary_identifiers":["UMLS:C0016053","DOID:631","Orphanet:41842","MESH:D005356","ICD10CM:M79.7","MEDGEN:42018","EFO:0005687","ICD9:729.1","SCTID:203082005","SCTID:24693007"],"synonyms":[{"name":"fibromyalgia","type":"exact"},{"name":"fibromyalgia syndrome","type":"exact"}],"termid":"MONDO:0005546","xrefs":{"Monarch":{"xref_id":"0005546"}}}


id: GO:0070593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which dendrites recognize and avoid contact with sister dendrites from the same cell.","definition_xrefs":["GOC:sart","PMID:17482551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron recognition","termid":"GO:0008038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendrite self-avoidance","synonyms":[{"name":"dendrite repulsion","type":"exact"}],"termid":"GO:0070593"}


id: GO:0009617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to bacterium","secondary_identifiers":["GO:0009618","GO:0009680","Reactome:R-HSA-9824439"],"synonyms":[{"name":"response to bacteria","type":"exact"}],"termid":"GO:0009617"}


id: PBO:0085475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Probable Hsp40p co-chaperone; has a DnaJ-like domain and appears to be involved in ER-associated degradation of misfolded proteins containing a tightly folded cytoplasmic domain; inhibits replication of Brome mosaic virus in S. cerevisiae","termid":"PBO:0085475"}


id: GO:0048467
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the gynoecium over time, from its formation to the mature structure. The gynoecium is the collective name for the carpels of a flower.","definition_xrefs":["PO:0008062","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral whorl development","termid":"GO:0048438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gynoecium development","synonyms":[{"name":"pistil development","type":"exact"}],"termid":"GO:0048467"}


id: PBO:0051310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR2-2 (pseudogene)","termid":"PBO:0051310"}


id: MONDO:0045034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disease characteristic","termid":"MONDO:0021125"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infectious disease characteristic","termid":"MONDO:0045034","xrefs":{"Monarch":{"xref_id":"0045034"}}}


id: MONDO:1011551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Legg-Calvé-Perthes disease that occurs in goat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Legg-Calvé-Perthes disease, non-human animal","termid":"MONDO:1011453"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Legg-Calvé-Perthes disease, goat","secondary_identifiers":["OMIA:000586-9925"],"termid":"MONDO:1011551","xrefs":{"Monarch":{"xref_id":"1011551"}}}


id: PR:O94717
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ers1 gene.","definition_xrefs":["UniProtKB:O94717","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-silencing factor ers1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1393.05","synonyms":[{"name":"Spom972h-ers1","type":"exact"}],"termid":"PR:O94717"}


id: GO:0000137
data:
  {"annotated_genes":["SJAG_01025","SJAG_03555","SJAG_04112","SJAG_04770","SJAG_00816","SJAG_01276","SJAG_04095"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77455,97868],"is_not":false,"summary":null,"term":"GO:0000137"},{"annotations":[71795],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000136"},{"annotations":[89310,71489,60008,119916],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140497"}]},"cv_name":"cellular_component","definition":"The Golgi cisterna closest to the endoplasmic reticulum; the first processing compartment through which proteins pass after export from the ER.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi cisterna","termid":"GO:0031985"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00816":null,"SJAG_01025":null,"SJAG_01276":null,"SJAG_03555":null,"SJAG_04095":null,"SJAG_04112":null,"SJAG_04770":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005794","GO:0005575"],"is_obsolete":false,"name":"Golgi cis cisterna","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"Golgi apparatus cis cisterna","type":"exact"}],"termid":"GO:0000137","terms_by_termid":{"GO:0000136":null,"GO:0000137":null,"GO:0140497":null}}


id: PBO:0050013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, A","termid":"PBO:0050013"}


id: PBO:0050148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 4","termid":"PBO:0050148"}


id: FYPO:0005983
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the export of potassium ions out of a cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal potassium export","termid":"FYPO:0005982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased potassium export","synonyms":[{"name":"decreased cellular potassium export","type":"exact"},{"name":"decreased potassium export during mitotic cell cycle","type":"related"},{"name":"decreased potassium export during vegetative growth","type":"exact"},{"name":"decreased potassium export from cell","type":"exact"},{"name":"decreased potassium ion export","type":"exact"},{"name":"decreased potassium ion export across plasma membrane","type":"exact"},{"name":"reduced potassium export","type":"exact"}],"termid":"FYPO:0005983"}


id: GO:0031537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chemical reactions and pathways involving anthocyanins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of primary metabolic process","termid":"GO:0080090"},{"relation_name":"regulates","term_name":"anthocyanin-containing compound metabolic process","termid":"GO:0046283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of anthocyanin metabolic process","synonyms":[{"name":"regulation of anthocyanin metabolism","type":"exact"}],"termid":"GO:0031537"}


id: PBO:0043120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytokine induced apoptosis inhibitor 1","termid":"PBO:0043120"}


id: MONDO:0003286
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign smooth muscle neoplasm arising from an extrahepatic bile duct. It is characterized by the presence of spindle cells with cigar-shaped nuclei, interlacing fascicles, and a whorled pattern.","definition_xrefs":["NCIT:C5855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver leiomyoma","termid":"MONDO:0004723"},{"relation_name":"is_a","term_name":"extrahepatic bile duct neoplasm","termid":"MONDO:0021385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"extrahepatic bile duct leiomyoma","secondary_identifiers":["UMLS:C1333507","DOID:5125","MEDGEN:232169"],"synonyms":[{"name":"extrahepatic bile duct leiomyoma","type":"exact"},{"name":"leiomyoma of extrahepatic bile duct","type":"exact"},{"name":"leiomyoma of the extrahepatic bile duct","type":"exact"}],"termid":"MONDO:0003286","xrefs":{"Monarch":{"xref_id":"0003286"}}}


id: PBO:0073743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 2","termid":"PBO:0073743"}


id: PBO:0081363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF197 antisense RNA 1","termid":"PBO:0081363"}


id: PBO:0002620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine decarboxylase Spe1 (predicted)","termid":"PBO:0002620"}


id: GO:0071544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a diphosphoinositol polyphosphate, 1,2,3,4,5,6-cyclohexanehexol with one or more diphosphate groups and multiple monophosphate groups attached.","definition_xrefs":["GOC:mah","PMID:12387729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphoinositol polyphosphate metabolic process","termid":"GO:0071543"},{"relation_name":"is_a","term_name":"inositol phosphate catabolic process","termid":"GO:0071545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"diphosphoinositol polyphosphate catabolic process","synonyms":[{"name":"diphosphoinositol polyphosphate breakdown","type":"exact"},{"name":"diphosphoinositol polyphosphate catabolism","type":"exact"},{"name":"diphosphoinositol polyphosphate degradation","type":"exact"}],"termid":"GO:0071544"}


id: GO:0047589
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + 5-aminopentanoate = 5-oxopentanoate + L-glutamate.","definition_xrefs":["EC:2.6.1.48","RHEA:10212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016769"],"is_obsolete":false,"name":"5-aminovalerate transaminase activity","secondary_identifiers":["KEGG_REACTION:R02274","MetaCyc:VAGL-RXN"],"synonyms":[{"name":"5-aminopentanoate:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"5-aminovalerate aminotransferase activity","type":"exact"},{"name":"delta-aminovalerate aminotransferase activity","type":"related"},{"name":"delta-aminovalerate transaminase activity","type":"related"}],"termid":"GO:0047589"}


id: MONDO:0024310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A angiodysplasia that involves the stomach.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angiodysplasia","termid":"MONDO:0002322"},{"relation_name":"is_a","term_name":"stomach disorder","termid":"MONDO:0004298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"angiodysplasia of stomach","secondary_identifiers":["icd11.foundation:977696596","UMLS:C0744273","MEDGEN:677051","SCTID:424802006"],"synonyms":[{"name":"gastric angiodysplasia","type":"related"},{"name":"gastric vascular dysplasia","type":"related"},{"name":"stomach angiodysplasia","type":"exact"}],"termid":"MONDO:0024310","xrefs":{"Monarch":{"xref_id":"0024310"}}}


id: PBO:0077856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPM1 antisense RNA","termid":"PBO:0077856"}


id: MONDO:0023186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fraser Jequier Chen syndrome","secondary_identifiers":["UMLS:C2930912","MESH:C535481","MEDGEN:419665"],"synonyms":[{"name":"chondrodysplasia, situs inversus totalis, cleft epiglottis and larynx, hexadactyly of hands and feet, pancreatic cystic dysplasia, renal dysplasia/abs","type":"related"}],"termid":"MONDO:0023186","xrefs":{"Monarch":{"xref_id":"0023186"}}}


id: GO:0060927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to pacemaker cell fates and their capacity to differentiate into pacemaker cells. Pacemaker cells are specialized cardiomyocytes that are responsible for regulating the timing of heart contractions.","definition_xrefs":["GOC:mtg_heart","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell fate commitment","termid":"GO:0060923"},{"relation_name":"part_of","term_name":"cardiac pacemaker cell differentiation","termid":"GO:0060920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac pacemaker cell fate commitment","synonyms":[{"name":"pacemaker cell fate commitment","type":"broad"}],"termid":"GO:0060927"}


id: PBO:0089607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial serine/threonine protein phosphatase PP2C catalytic subunit Ptc4","termid":"PBO:0089607"}


id: PBO:0075575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindlin family member 4","termid":"PBO:0075575"}


id: PBO:0088412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi GDP-mannose transmembrane transporter Vrg4","termid":"PBO:0088412"}


id: MONDO:0003444
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare adenoma that arises from the intrahepatic biliary tree.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile duct adenoma","termid":"MONDO:0006108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"intrahepatic bile duct adenoma","secondary_identifiers":["NCIT:C7126","DOID:5437","UMLS:C1331535","MEDGEN:272250"],"synonyms":[{"name":"adenoma of intrahepatic bile duct","type":"related"},{"name":"adenoma of the intrahepatic bile duct","type":"exact"},{"name":"adenoma, HEPATOCHOLANGIOCELLULAR, benign","type":"exact"},{"name":"intrahepatic bile duct adenoma","type":"exact"}],"termid":"MONDO:0003444","xrefs":{"Monarch":{"xref_id":"0003444"}}}


id: PBO:0029276
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_origin_recognition_complex_assembly","termid":"PBO:0029276"}


id: GO:0061699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of a glutaryl group (CO-CH2-CH2--CH2-CO) from a glutarylated lysine residue in a peptide or protein.","definition_xrefs":["PMID:24703693","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lysine deglutarylation (obsolete GO:0061699)","termid":"GO:0061699"}


id: MONDO:0007172
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An atrial heart septal defect type 1 associated with variation in the region 5p.","definition_xrefs":["PMID:9610535","DOID:0110106"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septal defect","termid":"MONDO:0006664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial septal defect 1","secondary_identifiers":["MEDGEN:349495","OMIM:108800","UMLS:C1862389"],"synonyms":[{"name":"ASD 1","type":"related"},{"name":"ASD 2","type":"related"},{"name":"ASD1","type":"exact"},{"name":"atrial heart septal defect type 1","type":"exact"},{"name":"atrial septal defect 1","type":"exact"},{"name":"atrial septal defect, primum type","type":"related"},{"name":"atrial septal defect, secundum type","type":"related"}],"termid":"MONDO:0007172","xrefs":{"Monarch":{"xref_id":"0007172"}}}


id: GO:0031448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fast-twitch skeletal muscle contraction.","definition_xrefs":["GOC:dph","GOC:mah","GOC:mtg_muscle","GOC:tb","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fast-twitch skeletal muscle fiber contraction","termid":"GO:0031446"},{"relation_name":"is_a","term_name":"positive regulation of striated muscle contraction","termid":"GO:0045989"},{"relation_name":"positively_regulates","term_name":"fast-twitch skeletal muscle fiber contraction","termid":"GO:0031443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of fast-twitch skeletal muscle fiber contraction","synonyms":[{"name":"activation of fast-twitch skeletal muscle contraction","type":"narrow"},{"name":"positive regulation of fast-twitch skeletal muscle contraction","type":"exact"},{"name":"stimulation of fast-twitch skeletal muscle contraction","type":"narrow"},{"name":"up regulation of fast-twitch skeletal muscle contraction","type":"exact"},{"name":"up-regulation of fast-twitch skeletal muscle contraction","type":"exact"},{"name":"upregulation of fast-twitch skeletal muscle contraction","type":"exact"}],"termid":"GO:0031448"}


id: PBO:0024859
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM4/6/7 helicase complex translocates along DNA/RNA duplex","termid":"PBO:0024859"}


id: FYPO:0007434
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells do not change the length at which they divide to the same extent as normal upon shifting from a good nitrogen source to a poor nitrogen source. Normally, cells divide at a smaller size after shifting to a poor nitrogen source; in mutants the size difference is less pronounced between media with good versus poor nitrogen sources. Good (or rich) nitrogen sources are distinguished from poor sources based on how readily nitrogen is assimilated into cellular metabolism. In microorganisms, good nitrogen sources generally support higher cell population growth rates than poor sources. In fission yeast, cells divide at a smaller size when grown on a poor nitrogen source than in nitrogen-rich media; proline is commonly used as a poor nitrogen source.","definition_xrefs":["PMID:10640599","PomBase:mah","PMID:25639242","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle regulation upon nitrogen source shift","termid":"FYPO:0005206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"attenuated change in cell size at division upon shift to poor nitrogen source","synonyms":[{"name":"attenuated change in cell size at division upon shift to poor nitrogen source during mitotic cell cycle","type":"related"},{"name":"attenuated change in cell size at division upon shift to poor nitrogen source during vegetative growth","type":"exact"},{"name":"decreased change in cell length at division after shift to poor nitrogen source","type":"exact"}],"termid":"FYPO:0007434"}


id: PBO:0089860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane stretch-activated calcium ion channel Yam8","termid":"PBO:0089860"}


id: MONDO:0008865
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bietti's crystalline dystrophy (BCD) is a rare progressive autosomal recessive tapetoretinal degeneration disease, occurring in the third decade of life, characterized by small sparkling crystalline deposits in the posterior retina and corneal limbus in addition to sclerosis of the choroidal vessels and manifesting as nightblindness, decreased vision, paracentral scotoma, and, in the end stages of the disease, legal blindness.","definition_xrefs":["Orphanet:41751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial flecked retinopathy","termid":"MONDO:0016420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Bietti crystalline corneoretinal dystrophy","secondary_identifiers":["NCIT:C179299","OMIM:210370","SCTID:312927001","UMLS:C1859486","MESH:C535440","MEDGEN:347895","GARD:10050","DOID:0050664"],"synonyms":[{"name":"BCD","type":"exact"},{"name":"Bietti crystalline corneoretinal dystrophy","type":"exact"},{"name":"Bietti crystalline dystrophy","type":"related"},{"name":"Bietti crystalline retinopathy","type":"exact"},{"name":"Bietti tapetoretinal Degeneration with marginal corneal dystrophy","type":"related"},{"name":"Bietti's crystalline dystrophy","type":"exact"}],"termid":"MONDO:0008865","xrefs":{"Monarch":{"xref_id":"0008865"}}}


id: PBO:0068380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 181","termid":"PBO:0068380"}


id: GO:0090203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation and maintenance of DNA loops that juxtapose the promoter and terminator regions of RNA polymerase II-transcribed genes and activate transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dph","GOC:rb","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete transcriptional activation by promoter-terminator looping (obsolete GO:0090203)","synonyms":[{"name":"transcriptional activation by memory gene loops","type":"related"}],"termid":"GO:0090203"}


id: MONDO:0015210
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A gastroduodenal malformation that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"gene_count":0,"genotype_count":0,"name":"obsolete syndromic gastroduodenal malformation (obsolete MONDO:0015210)","secondary_identifiers":["Orphanet:108965"],"synonyms":[{"name":"syndrome associated with gastroduodenal malformation","type":"exact"},{"name":"syndromic gastroduodenal malformation","type":"exact"}],"termid":"MONDO:0015210","xrefs":{"Monarch":{"xref_id":"0015210"}}}


id: GO:0033714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: secondary alcohol + O2 = H2O2 + ketone.","definition_xrefs":["RHEA:23180","EC:1.1.3.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"secondary-alcohol oxidase activity","secondary_identifiers":["MetaCyc:SECONDARY-ALCOHOL-OXIDASE-RXN","KEGG_REACTION:R02277"],"synonyms":[{"name":"polyvinyl alcohol oxidase activity","type":"related"},{"name":"secondary alcohol oxidase activity","type":"related"},{"name":"secondary-alcohol:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0033714"}


id: PBO:0075853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX2IP pseudogene 1","termid":"PBO:0075853"}


id: PBO:0079202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSPY like 6","termid":"PBO:0079202"}


id: PBO:0001559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminoacyl-tRNA hydrolase (predicted)","termid":"PBO:0001559"}


id: PBO:0034585
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-slow_vegetative_cell_population_growth_followed_by_return_to_normal_growth_rate","termid":"PBO:0034585"}


id: MONDO:0035369
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MTHFS-related developmental delay-microcephaly-short stature-epilepsy syndrome (obsolete MONDO:0035369)","termid":"MONDO:0035369","xrefs":{"Monarch":{"xref_id":"0035369"}}}


id: PBO:0055538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2974","termid":"PBO:0055538"}


id: PBO:0076553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tax1 binding protein 1","termid":"PBO:0076553"}


id: PATO:0000603
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000603 closure value (obsolete PATO:0000603)","termid":"PATO:0000603"}


id: PBO:0048738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-ammonia ligase","termid":"PBO:0048738"}


id: MONDO:0012079
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"Asperger syndrome","termid":"MONDO:0005259"},{"relation_name":"is_a","term_name":"Asperger syndrome, susceptibility to","termid":"MONDO:0100440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asperger syndrome, susceptibility to, 2","secondary_identifiers":["OMIM:608631","UMLS:C1837697","MEDGEN:332517"],"synonyms":[{"name":"ASPERGER syndrome, susceptibility to, 2","type":"related"},{"name":"ASPG2","type":"exact"},{"name":"Asperger syndrome susceptibility 2, Isolated cases","type":"exact"}],"termid":"MONDO:0012079","xrefs":{"Monarch":{"xref_id":"0012079"}}}


id: PBO:0018181
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Encephalopathy","termid":"PBO:0018181"}


id: PR:O14172
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- met8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siroheme biosynthesis protein met8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.06c","synonyms":[{"name":"Spom972h-met8","type":"exact"}],"termid":"PR:O14172"}


id: FYPO:0003954
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which triglyceride biosynthesis is decreased.","definition_xrefs":["GO:0019493","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased triglyceride biosynthetic process","synonyms":[{"name":"decreased TAG biosynthetic process","type":"exact"},{"name":"decreased triacylglycerol biosynthesis","type":"exact"},{"name":"decreased triacylglycerol biosynthetic process","type":"exact"},{"name":"decreased triglyceride biosynthesis","type":"exact"},{"name":"decreased triglyceride biosynthetic process during mitotic cell cycle","type":"related"},{"name":"decreased triglyceride biosynthetic process during vegetative growth","type":"exact"},{"name":"reduced triglyceride biosynthetic process","type":"exact"}],"termid":"FYPO:0003954"}


id: MONDO:0005215
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from epithelial cells of the mammalian vulva","direct_ancestors":[{"relation_name":"is_a","term_name":"vulva cancer","termid":"MONDO:0001528"},{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vulvar carcinoma","secondary_identifiers":["UMLS:C0677055","Orphanet:494418","SCTID:447882007","DOID:1294","EFO:0002921","GARD:9349","MEDGEN:146159","NCIT:C4866"],"synonyms":[{"name":"cancer of the vulva","type":"broad"},{"name":"cancer of vulva","type":"broad"},{"name":"carcinoma of mammalian vulva","type":"exact"},{"name":"carcinoma of the vulva","type":"exact"},{"name":"carcinoma of vulva","type":"exact"},{"name":"mammalian vulva carcinoma","type":"exact"},{"name":"vulva cancer","type":"broad"},{"name":"vulva carcinoma","type":"exact"},{"name":"vulvar cancer","type":"broad"},{"name":"vulvar carcinoma","type":"exact"}],"termid":"MONDO:0005215","xrefs":{"Monarch":{"xref_id":"0005215"}}}


id: PBO:0047284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FA complementation group I","termid":"PBO:0047284"}


id: PBO:0052864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 5-7","termid":"PBO:0052864"}


id: PBO:0044923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DiGeorge syndrome critical region gene 11","termid":"PBO:0044923"}


id: FYPO:0002236
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more sterol esters measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular sterol ester level","synonyms":[{"name":"normal cellular sterol ester level during mitotic cell cycle","type":"related"},{"name":"normal cellular sterol ester level during vegetative growth","type":"exact"},{"name":"normal level of sterol ester in cell","type":"exact"}],"termid":"FYPO:0002236"}


id: FYPO:0006663
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the nucleus is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enlarged nucleus","termid":"FYPO:0002255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0002403"],"is_obsolete":false,"name":"elongated nucleus","synonyms":[{"name":"elongated nuclei","type":"exact"},{"name":"long nucleus","type":"exact"}],"termid":"FYPO:0006663"}


id: GO:0042705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a photoreceptor cell found in the ocellus.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoreceptor cell differentiation","termid":"GO:0046530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ocellus photoreceptor cell differentiation","termid":"GO:0042705"}


id: PBO:0086073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that may interact with ribosomes; periodically expressed during the yeast metabolic cycle; phosphorylated in vitro by the mitotic exit network (MEN) kinase complex, Dbf2p/Mob1p","termid":"PBO:0086073"}


id: GO:0031169
data:
  {"annotated_genes":["SJAG_00792","SJAG_00469","SJAG_04032","SJAG_04031"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59631,95922,107223],"is_not":false,"summary":null,"term":"GO:0031169"},{"annotations":[95868],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905569"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a ferrichrome. Ferrichromes are any of a group of growth-promoting Fe(III) chelates formed by various genera of microfungi. They are homodetic cyclic hexapeptides made up of a tripeptide of glycine (or other small neutral amino acids) and a tripeptide of an N'acyl-N4-hydroxy-L-ornithine.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymate-containing siderophore biosynthetic process","termid":"GO:0019539"},{"relation_name":"is_a","term_name":"ferrichrome metabolic process","termid":"GO:0031168"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00469":null,"SJAG_00792":null,"SJAG_04031":null,"SJAG_04032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"ferrichrome biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0031199","GO:0031200"],"synonyms":[{"name":"ferrichrome anabolism","type":"exact"},{"name":"ferrichrome biosynthesis","type":"exact"},{"name":"ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"ferrichrome formation","type":"exact"},{"name":"ferrichrome synthesis","type":"exact"}],"termid":"GO:0031169","terms_by_termid":{"GO:0031169":null,"GO:1905569":null}}


id: GO:0048790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process which maintains the organization and the arrangement of proteins at the active zone to ensure the fusion and docking of vesicles and the release of neurotransmitters.","definition_xrefs":["GOC:curators","GOC:dph","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of synapse structure","termid":"GO:0099558"},{"relation_name":"is_a","term_name":"presynaptic active zone organization","termid":"GO:1990709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of presynaptic active zone structure","synonyms":[{"name":"maintenance of pre-synaptic active zone structure","type":"exact"}],"termid":"GO:0048790"}


id: MONDO:0024390
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete actinomycotic infectious disease (obsolete MONDO:0024390)","termid":"MONDO:0024390","xrefs":{"Monarch":{"xref_id":"0024390"}}}


id: MOD:01110
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an L-cysteine residue with a group derived from an isoprene polymer, such as a geranyl (C10), farnesyl (C15) or geranylgeranyl (C20).","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenylated residue","termid":"MOD:00703"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"},{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155","MOD:00905"],"is_obsolete":false,"name":"isoprenylated cysteine","synonyms":[{"name":"IpCys","type":"exact"}],"termid":"MOD:01110"}


id: PBO:0081750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 680","termid":"PBO:0081750"}


id: GO:0080125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process whose specific outcome is the progression of the multicellular structure septum over time, from its formation to the mature structure. The multicellular structure septum is the thin partition or membrane that divides a cavity or a mass of tissue.","definition_xrefs":["GOC:dhl"],"gene_count":0,"genotype_count":0,"name":"obsolete multicellular structure septum development (obsolete GO:0080125)","termid":"GO:0080125"}


id: GO:0002500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydrolysis of a peptide bond or bonds within a protein by lysosomal resident proteases contributing to antigen processing and presentation.","definition_xrefs":["ISBN:0781735149","GOC:add","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteolysis associated with antigen processing and presentation","termid":"GO:0002496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"proteolysis within lysosome associated with antigen processing and presentation","synonyms":[{"name":"lysosomal proteolysis associated with antigen processing and presentation","type":"exact"}],"termid":"GO:0002500"}


id: PBO:0053917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1214","termid":"PBO:0053917"}


id: FYPO:0004503
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein having high molecular mass due to polyubiquitin conjugation is greater than normal.","definition_xrefs":["PMID:8247131","PomBase:mah","PMID:16149916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular HMW ubiquitin conjugate level","synonyms":[{"name":"accumulation of HMW ubiquitin conjugates","type":"exact"},{"name":"accumulation of high molecular mass ubiquitin conjugates","type":"exact"},{"name":"accumulation of high molecular weight ubiquitin conjugates","type":"exact"},{"name":"increased HMW ubiquitin conjugate accumulation","type":"related"},{"name":"increased cellular HMW ubiquitin conjugate level during mitotic cell cycle","type":"related"},{"name":"increased cellular HMW ubiquitin conjugate level during vegetative growth","type":"exact"},{"name":"increased cellular high molecular mass ubiquitin conjugate level during vegetative growth","type":"exact"},{"name":"increased cellular high molecular weight ubiquitin conjugate level during vegetative growth","type":"exact"}],"termid":"FYPO:0004503"}


id: PBO:0043496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNTN4 antisense RNA 1","termid":"PBO:0043496"}


id: PBO:0027386
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_with_swollen_elongated_germ_tube_and_bidirectional_cell_growth_from_spore_body","termid":"PBO:0027386"}


id: GO:0004372
data:
  {"annotated_genes":["SJAG_03914","SJAG_01766"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73812,75072],"is_not":false,"summary":null,"term":"GO:0004372"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,10-methylenetetrahydrofolate + glycine + H2O = tetrahydrofolate + L-serine.","definition_xrefs":["RHEA:15481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01766":null,"SJAG_03914":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"glycine hydroxymethyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:2.1.2.1","Reactome:R-HSA-5694137","MetaCyc:GLYOHMETRANS-RXN"],"synonyms":[{"name":"5,10-methylenetetrahydrofolate:glycine hydroxymethyltransferase activity","type":"related"},{"name":"L-serine hydroxymethyltransferase activity","type":"related"},{"name":"allothreonine aldolase activity","type":"related"},{"name":"serine aldolase activity","type":"related"},{"name":"serine hydroxymethylase activity","type":"related"},{"name":"serine hydroxymethyltransferase activity","type":"related"},{"name":"serine transhydroxymethylase activity","type":"related"}],"termid":"GO:0004372","terms_by_termid":{"GO:0004372":null}}


id: GO:0005068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together a transmembrane receptor protein tyrosine kinase and one or more other molecules, permitting them to function in a coordinated way.","definition_xrefs":["PMID:10502414","GOC:mtg_MIT_16mar07","PMID:20565848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor complex adaptor activity","termid":"GO:0030159"},{"relation_name":"is_a","term_name":"receptor tyrosine kinase binding","termid":"GO:0030971"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0060090","GO:0005515","GO:0003674","GO:0030674","GO:0005488"],"is_obsolete":false,"name":"transmembrane receptor protein tyrosine kinase adaptor activity","secondary_identifiers":["GO:0005069"],"synonyms":[{"name":"transmembrane receptor protein tyrosine kinase adaptor protein activity","type":"exact"},{"name":"transmembrane receptor protein tyrosine kinase docking protein activity","type":"related"}],"termid":"GO:0005068"}


id: GO:0005109
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a frizzled (fz) receptor.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"frizzled binding","secondary_identifiers":["GO:0005110"],"synonyms":[{"name":"frizzled ligand","type":"narrow"},{"name":"frizzled-2 binding","type":"narrow"},{"name":"frizzled-2 ligand","type":"narrow"},{"name":"fz binding","type":"exact"},{"name":"fz ligand","type":"narrow"},{"name":"fz2 binding","type":"narrow"},{"name":"fz2 ligand","type":"narrow"}],"termid":"GO:0005109"}


id: PBO:0090505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis protein Dph2","termid":"PBO:0090505"}


id: PBO:0109512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1342, pseudogene","termid":"PBO:0109512"}


id: GO:0120555
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a ubiquinone + NADH + H+ = a ubiquinol + NAD+.","definition_xrefs":["RHEA:23152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NADH dehydrogenase (quinone) (non-electrogenic) activity","termid":"GO:0050136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"NADH dehydrogenase (ubiquinone) (non-electrogenic) activity","termid":"GO:0120555"}


id: MONDO:1012084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tetragametic chimerism, non-human animal","termid":"MONDO:1011918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetragametic chimerism, pig","secondary_identifiers":["OMIA:000393-9823"],"termid":"MONDO:1012084","xrefs":{"Monarch":{"xref_id":"1012084"}}}


id: MONDO:0016608
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital abnormality in which the occipitofrontal circumference is greater than two standard deviations above the mean for a given age. It is associated with hydrocephalus; subdural effusion; arachnoid cysts; or is part of a genetic condition (e.g., alexander disease; sotos syndrome).","definition_xrefs":["MESH:D058627"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megalencephaly","secondary_identifiers":["HP:0001355","icd11.foundation:368780653","MedDRA:10050183","GARD:16601","UMLS:C0221355","MEDGEN:65141","Orphanet:2477","ICD9:742.4","SCTID:9740002","ICD10CM:Q04.5"],"synonyms":[{"name":"macroencephaly","type":"exact"},{"name":"megalencephaly","type":"exact"},{"name":"megalencephaly (disease)","type":"exact"}],"termid":"MONDO:0016608","xrefs":{"Monarch":{"xref_id":"0016608"}}}


id: PR:P40997
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ceg1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA-capping enzyme subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2F12.08c","synonyms":[{"name":"GTP--RNA guanylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GTase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ceg1","type":"exact"},{"name":"mRNA guanylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40997"}


id: GO:0047416
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N-acetylarylalkylamine = acetate + arylalkylamine.","definition_xrefs":["MetaCyc:3.5.1.76-RXN","EC:3.5.1.76"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"arylalkyl acylamidase activity","secondary_identifiers":["RHEA:10352"],"synonyms":[{"name":"N-acetylarylalkylamine amidohydrolase activity","type":"related"},{"name":"aralkyl acylamidase activity","type":"related"}],"termid":"GO:0047416"}


id: GO:0016936
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a glycoside in which the sugar group is galactose.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"galactoside binding","termid":"GO:0016936"}


id: GO:0097145
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An oligomeric protein complex consisting of BAK, a member of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["GOC:so","PMID:14634621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"BAK complex","termid":"GO:0097145"}


id: GO:0004018
data:
  {"annotated_genes":["SJAG_02850"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78726],"is_not":false,"summary":null,"term":"GO:0004018"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N6-(1,2-dicarboxyethyl)AMP = fumarate + AMP.","definition_xrefs":["RHEA:16853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidine-lyase activity","termid":"GO:0016842"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:AMPSYN-RXN","KEGG_REACTION:R01083"],"synonyms":[{"name":"6-N-(1,2-dicarboxyethyl)AMP AMP-lyase activity","type":"related"},{"name":"N6-(1,2-dicarboxyethyl)AMP AMP-lyase activity","type":"related"},{"name":"adenylosuccinase activity","type":"broad"},{"name":"adenylosuccinate lyase activity","type":"broad"},{"name":"succino AMP-lyase activity","type":"broad"}],"termid":"GO:0004018","terms_by_termid":{"GO:0004018":null}}


id: GO:0086054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates signaling interactions between a bundle of His cardiac muscle cell and a Purkinje myocyte by transfer of current between their adjacent cytoplasms via intercellular protein channels.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication by electrical coupling involved in cardiac conduction","termid":"GO:0086064"},{"relation_name":"is_a","term_name":"bundle of His cell to Purkinje myocyte communication","termid":"GO:0086069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bundle of His cell to Purkinje myocyte communication by electrical coupling","synonyms":[{"name":"bundle of His cardiac muscle cell to Purkinje myocyte communication by electrical coupling","type":"exact"}],"termid":"GO:0086054"}


id: PBO:0073407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 10","termid":"PBO:0073407"}


id: PBO:0059977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 22","termid":"PBO:0059977"}


id: FYPO:0005509
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiotic sister chromatid segregation is abnormal. Meiotic sister chromatid segregation is the process in which sister chromatids are organized and then physically separated and randomly apportioned to two sets during the second division of the meiotic cell cycle.","definition_xrefs":["GO:0045144","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"},{"relation_name":"is_a","term_name":"abnormal meiosis II","termid":"FYPO:0006526"},{"relation_name":"is_a","term_name":"abnormal meiotic chromosome organization","termid":"FYPO:0006759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000641","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal meiotic sister chromatid segregation","synonyms":[{"name":"abnormal sister chromatid segregation during meiosis II","type":"exact"},{"name":"chromosome missegregation during meiosis II","type":"related"},{"name":"meiotic chromosome missegregation","type":"related"},{"name":"meiotic sister chromatid missegregation","type":"related"}],"termid":"FYPO:0005509"}


id: PBO:0071768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P2 pseudogene 1","termid":"PBO:0071768"}


id: PR:O60126
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA topoisomerase 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04045","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.12c","secondary_identifiers":["UniProtKB:O60126"],"synonyms":[{"name":"DNA topoisomerase III (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-topB","type":"exact"}],"termid":"PR:O60126"}


id: GO:0019272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of alanine from other compounds, including pyruvate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate metabolic process","termid":"GO:0006090"},{"relation_name":"is_a","term_name":"L-alanine biosynthetic process","termid":"GO:0042852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"L-alanine biosynthetic process from pyruvate","synonyms":[{"name":"L-alanine anabolism from pyruvate","type":"exact"},{"name":"L-alanine formation from pyruvate","type":"exact"},{"name":"L-alanine synthesis from pyruvate","type":"exact"}],"termid":"GO:0019272"}


id: PBO:0071365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 24","termid":"PBO:0071365"}


id: GO:0008643
data:
  {"annotated_genes":["SJAG_03606","SJAG_00057","SJAG_02958","SJAG_03608","SJAG_04905","SJAG_03960","SJAG_02719","SJAG_03820","SJAG_04068"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65810,58513,61526,61510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034219"},{"annotations":[112494,116033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046323"},{"annotations":[119075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098708"},{"annotations":[112495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140425"},{"annotations":[66082,104805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008645"},{"annotations":[97581],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106081"},{"annotations":[97582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106082"}]},"cv_name":"biological_process","definition":"The directed movement of carbohydrate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Carbohydrates are a group of organic compounds based of the general formula Cx(H2O)y.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_02719":null,"SJAG_02958":null,"SJAG_03606":null,"SJAG_03608":null,"SJAG_03820":null,"SJAG_03960":null,"SJAG_04068":null,"SJAG_04905":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"carbohydrate transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0006861","GO:0008644"],"synonyms":[{"name":"sugar transport","type":"narrow"}],"termid":"GO:0008643","terms_by_termid":{"GO:0008645":null,"GO:0034219":null,"GO:0046323":null,"GO:0098708":null,"GO:0106081":null,"GO:0106082":null,"GO:0140425":null}}


id: PBO:0065273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRR34 antisense RNA 1","termid":"PBO:0065273"}


id: SO:0000956
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, single-stranded DNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"single","termid":"SO:0000984"},{"relation_name":"is_a","term_name":"DNA_chromosome","termid":"SO:0000954"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single_stranded_DNA_chromosome","synonyms":[{"name":"single stranded DNA chromosome","type":"exact"}],"termid":"SO:0000956"}


id: GO:0052579
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1R,4S)-menthone + NADP+ = (R)-pulegone + H+ + NADPH. Also converts (2R,5R)-isomenthone into (R)-pulegone.","definition_xrefs":["EC:1.3.1.81"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"(+)-pulegone reductase (NADP+) activity","synonyms":[{"name":"(+)-isomenthone:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0052579"}


id: PBO:0075587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine peptidase inhibitor Kazal type 14 (putative)","termid":"PBO:0075587"}


id: PBO:0038395
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-affected_by","termid":"PBO:0038395"}


id: PBO:0073756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 10","termid":"PBO:0073756"}


id: PBO:0109294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA oncogene in head and neck cancer 2","termid":"PBO:0109294"}


id: PR:Q06182
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swi10 gene.","definition_xrefs":["UniProtKB:Q06182","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type switching protein swi10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.15c","synonyms":[{"name":"Spom972h-swi10","type":"exact"}],"termid":"PR:Q06182"}


id: PBO:0067140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 188, pseudogene","termid":"PBO:0067140"}


id: GO:0090535
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ISWI complex that contains an ATPase subunit of the ISWI family (specifically SNF2H in mammals, which contain two ISWI homologs) and WSTF (Williams Syndrome Transcription Factor). WICH plays roles in regulation of RNAP I and III transcription and in DNA replication and repair.","definition_xrefs":["GOC:krc","PMID:15284901","PMID:16568949","PMID:21810179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ISWI-type complex","termid":"GO:0031010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"WICH complex","termid":"GO:0090535"}


id: PR:G2TRT9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC794.16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRT9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C794.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.16","synonyms":[{"name":"Spom972h-SPCC794.16","type":"exact"}],"termid":"PR:G2TRT9"}


id: GO:1902656
data:
  {"annotated_genes":["SJAG_00296","SJAG_02877","SJAG_05229","SJAG_01090","SJAG_04551","SJAG_04668","SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68221,76193,94212,116296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098703"},{"annotations":[93030,115218],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905949"},{"annotations":[103962],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"The directed movement of calcium ion into a cytosol.","definition_xrefs":["GOC:vw","GOC:TermGenie","GO_REF:0000075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion transport","termid":"GO:0006816"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_01090":null,"SJAG_02877":null,"SJAG_03631":null,"SJAG_04551":null,"SJAG_04668":null,"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"calcium ion import into cytosol","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"calcium import into cytosol","type":"broad"}],"termid":"GO:1902656","terms_by_termid":{"GO:0098703":null,"GO:1905665":null,"GO:1905949":null}}


id: PR:P55306
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A catalase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04165","PANTHER:PTHR11465:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catalase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.07c","secondary_identifiers":["UniProtKB:P55306"],"synonyms":[{"name":"Spom972h-CAT","type":"exact"}],"termid":"PR:P55306"}


id: PBO:0120257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AK2 antisense RNA 1","termid":"PBO:0120257"}


id: PBO:0044899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"derlin 1","termid":"PBO:0044899"}


id: PBO:0048100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FTO alpha-ketoglutarate dependent dioxygenase","termid":"PBO:0048100"}


id: PBO:0035737
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_extent_and_duration_of_protein-protein_interaction","termid":"PBO:0035737"}


id: GO:0005703
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A swelling at a site along the length of a polytene chromosome, thought to be the site of active transcription.","definition_xrefs":["GOC:bf","ISBN:0120649012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal region","termid":"GO:0098687"},{"relation_name":"part_of","term_name":"polytene chromosome","termid":"GO:0005700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"polytene chromosome puff","termid":"GO:0005703"}


id: PR:000024854
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- map2 gene or a 1:1 ortholog thereof. In Schizosaccharomyces pombe, proteolytic processing yeilds four peptides - two copies of P-factor 1 and one each of P-factor 2 and P-factor 3.","definition_xrefs":["PRO:MSY","PMID:8314086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-factor precursor","pombase_gene_id":"SPCC1795.06","synonyms":[{"name":"map2","type":"exact"}],"termid":"PR:000024854"}


id: GO:1990563
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is wholly or partially contained within the lumen or membrane of the extracellular vesicular exosome.","definition_xrefs":["PMID:22660413","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular exosome","termid":"GO:0070062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005576"],"is_obsolete":false,"name":"extracellular exosome complex","synonyms":[{"name":"exosome complex","type":"exact"},{"name":"extracellular vesicular exosome complex","type":"exact"}],"termid":"GO:1990563"}


id: PBO:0053959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1266","termid":"PBO:0053959"}


id: MONDO:0021023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Complete androgen insensitivity syndrome (CAIS) is a form of androgen insensitivity syndrome (AIS), a disorder of sex development (DSD), characterized by the presence of female external genitalia in a 46,XY individual with normal testis development but undescended testes and unresponsiveness to age-appropriate levels of androgens.","definition_xrefs":["Orphanet:99429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"androgen insensitivity syndrome","termid":"MONDO:0019154"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complete androgen insensitivity syndrome","secondary_identifiers":["SCTID:368851000119102","UMLS:C0936016","DOID:0080775","ICD10CM:E34.51","MEDGEN:183188","NCIT:C120191","GARD:10597"],"synonyms":[{"name":"CAIS","type":"exact"},{"name":"androgen insensitivity syndrome, complete","type":"related"},{"name":"complete androgen resistance syndrome","type":"exact"}],"termid":"MONDO:0021023","xrefs":{"Monarch":{"xref_id":"0021023"}}}


id: PBO:0028901
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_DNA_damage_checkpoint_during_cellular_response_to_UV","termid":"PBO:0028901"}


id: PBO:0077198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 4 L six family member 4","termid":"PBO:0077198"}


id: MONDO:0042975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pseudoachondroplastic dysplasia 2 (obsolete MONDO:0042975)","secondary_identifiers":["MESH:C535820","GARD:4542","OMIM:264150"],"synonyms":[{"name":"pseudoachondroplastic dysplasia 2","type":"exact"},{"name":"recessive pseudoachondroplasia","type":"related"},{"name":"spondyloepiphyseal dysplasia pseudoachondroplastic 2","type":"related"}],"termid":"MONDO:0042975","xrefs":{"Monarch":{"xref_id":"0042975"}}}


id: MONDO:0003365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant smooth muscle neoplasm, arising from the esophagus. It is characterized by a proliferation of neoplastic spindle cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophagus sarcoma","termid":"MONDO:0001204"},{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"esophagus leiomyosarcoma","secondary_identifiers":["MEDGEN:272589","UMLS:C1333454","NCIT:C5334","DOID:5276"],"synonyms":[{"name":"esophageal leiomyosarcoma","type":"exact"},{"name":"esophagus leiomyosarcoma","type":"exact"},{"name":"leiomyosarcoma of esophagus","type":"exact"},{"name":"leiomyosarcoma of oesophagus","type":"exact"},{"name":"leiomyosarcoma of the esophagus","type":"exact"},{"name":"leiomyosarcoma of the oesophagus","type":"exact"}],"termid":"MONDO:0003365","xrefs":{"Monarch":{"xref_id":"0003365"}}}


id: GO:0062112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a fatty acid primary amide.","definition_xrefs":["PMID:15952893","PMID:10079066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"fatty acid primary amide metabolic process","termid":"GO:0062126"},{"relation_name":"is_a","term_name":"fatty acid derivative biosynthetic process","termid":"GO:1901570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"fatty acid primary amide biosynthetic process","synonyms":[{"name":"FAPA biosynthesis","type":"exact"},{"name":"FAPA biosynthetic process","type":"exact"},{"name":"fatty acid amide biosynthesis","type":"exact"}],"termid":"GO:0062112"}


id: PBO:0072669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor transporter protein 2","termid":"PBO:0072669"}


id: GO:0002534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis or release of a cytokine following a inflammatory stimulus as part of an inflammatory response, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"},{"relation_name":"is_a","term_name":"production of molecular mediator involved in inflammatory response","termid":"GO:0002532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"cytokine production involved in inflammatory response","synonyms":[{"name":"cytokine production involved in acute inflammatory response","type":"broad"}],"termid":"GO:0002534"}


id: FYPO:0001580
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing leucine as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000257","FYPO:0002057","FYPO:0000003","FYPO:0000139","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on leucine nitrogen source","synonyms":[{"name":"normal cell population growth on leucine nitrogen source","type":"exact"},{"name":"normal cell population growth on monomeric leucine nitrogen source","type":"exact"},{"name":"normal leucine utilization","type":"related"},{"name":"normal monomeric leucine utilization","type":"related"},{"name":"normal vegetative cell population growth on leucine nitrogen source","type":"exact"}],"termid":"FYPO:0001580"}


id: GO:0015811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-cystine (also known as dicysteine) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid transport","termid":"GO:0000101"},{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"},{"relation_name":"is_a","term_name":"L-amino acid transport","termid":"GO:0015807"},{"relation_name":"is_a","term_name":"modified amino acid transport","termid":"GO:0072337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"L-cystine transport","termid":"GO:0015811"}


id: PBO:0055602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3040","termid":"PBO:0055602"}


id: PBO:0003739
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.205","termid":"PBO:0003739"}


id: MONDO:0017150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Pulmonary arterial hypertension associated with another disease is a group of conditions that lead to PAH; connective tissue diseases (lupus erythematosus, systemic sclerosis and mixed connective tissues disease), congenital heart disease (Eisenmenger syndrome), HIV infection, portal hypertension, schistosomiasis and chronic hemolytic anemia, which is characterized by elevated pulmonary arterial resistance leading to right heart failure that is progressive and potentially fatal.","definition_xrefs":["Orphanet:275791"],"gene_count":0,"genotype_count":0,"name":"obsolete pulmonary arterial hypertension associated with another disease (obsolete MONDO:0017150)","secondary_identifiers":["NANDO:2201048"],"synonyms":[{"name":"PAH associated with another disease","type":"exact"},{"name":"secondary PAH","type":"exact"}],"termid":"MONDO:0017150","xrefs":{"Monarch":{"xref_id":"0017150"}}}


id: FYPO:0006339
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell has one nucleus that is not in the normal location.","definition_xrefs":["PomBase:mah","PMID:15937127","PomBase:vw"],"direct_ancestors":[{"relation_name":"has_part","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"has_part","term_name":"mislocalized nucleus","termid":"FYPO:0002069"},{"relation_name":"is_a","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"is_a","term_name":"mislocalized nucleus","termid":"FYPO:0002069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"mononucleate vegetative cell with mislocalized nucleus","synonyms":[{"name":"lethal; mononucleate vegetative cell with mislocalized nucleus","type":"exact"},{"name":"mononucleate cell with abnormal nucleus location","type":"exact"},{"name":"mononucleate cell with abnormal nucleus position","type":"exact"},{"name":"mononucleate cell with asymmetrically localized nucleus","type":"exact"},{"name":"mononucleate cell with displaced nucleus","type":"exact"},{"name":"mononucleate cell with mislocalised nucleus","type":"exact"},{"name":"mononucleate cell with mislocalized nucleus during vegetative growth","type":"exact"},{"name":"mononucleate cell with misplaced nucleus","type":"exact"},{"name":"mononucleate vegetative cell with mislocalized nucleus during mitotic cell cycle","type":"related"},{"name":"vegetative cell with mislocalized mononucleus","type":"exact"}],"termid":"FYPO:0006339"}


id: PBO:0068801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 38, pseudogene","termid":"PBO:0068801"}


id: PBO:0086024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; transcript accumulates in response to any combination of stress conditions","termid":"PBO:0086024"}


id: PBO:0064853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 14B pseudogene 4","termid":"PBO:0064853"}


id: PBO:0070271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 6","termid":"PBO:0070271"}


id: MONDO:0013611
data:
  {"annotated_genes":["SJAG_03557","SJAG_02712"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87629,87630],"is_not":false,"summary":null,"term":"MONDO:0013611"}]},"cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the MAK gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"MAK-related retinopathy","termid":"MONDO:0700229"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02712":null,"SJAG_03557":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 62","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110380","ICD10CM:H35.5","MEDGEN:481672","OMIM:614181","GARD:15767","UMLS:C3280042"],"synonyms":[{"name":"MAK retinitis pigmentosa","type":"exact"},{"name":"RP62","type":"exact"},{"name":"retinitis pigmentosa 62","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in MAK","type":"exact"},{"name":"retinitis pigmentosa type 62","type":"exact"}],"termid":"MONDO:0013611","terms_by_termid":{"MONDO:0013611":null},"xrefs":{"Monarch":{"xref_id":"0013611"}}}


id: PBO:0041448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 9 open reading frame 152","termid":"PBO:0041448"}


id: GO:2000583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of platelet-derived growth factor receptor-alpha signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of platelet-derived growth factor receptor signaling pathway","termid":"GO:0010640"},{"relation_name":"regulates","term_name":"platelet-derived growth factor receptor-alpha signaling pathway","termid":"GO:0035790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of platelet-derived growth factor receptor-alpha signaling pathway","synonyms":[{"name":"regulation of PDGF receptor-alpha signaling pathway","type":"exact"},{"name":"regulation of PDGFR-alpha signaling pathway","type":"related"},{"name":"regulation of alphaPDGF receptor signaling pathway","type":"exact"},{"name":"regulation of platelet-derived growth factor receptor-alpha signalling pathway","type":"exact"}],"termid":"GO:2000583"}


id: PBO:0045922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand calcium binding domain 14 pseudogene 1","termid":"PBO:0045922"}


id: PBO:0061054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nipsnap homolog 2","termid":"PBO:0061054"}


id: PBO:0027357
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_generation_of_precursor_metabolites_and_energy_gene_mRNA_during_vegetative_growth","termid":"PBO:0027357"}


id: MONDO:0016240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemimelia is a limb malformation characterized by the absence or gross shortening of the lower portion of one or more of the limbs. The condition is designated according to which bone of the distal arm or leg is absent or defective and includes fibular, radial, tibial, or ulnar hemimelia. Hemimelia ranges in severity.","definition_xrefs":["Orphanet:2130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"hemimelia","secondary_identifiers":["NCIT:C34674","UMLS:C0018987","MEDGEN:9194","SCTID:33076008","MedDRA:10019464","GARD:18761"],"synonyms":[{"name":"longitudinal meromelia","type":"exact"}],"termid":"MONDO:0016240","xrefs":{"Monarch":{"xref_id":"0016240"}}}


id: GO:0052495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism reduces the flow of fluid within its second organism's vascular system, the vessels and tissue that carry or circulate fluids, such as blood, lymph or sap, through the body of an animal or plant, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete occlusion by organism of vascular system in other organism involved in symbiotic interaction (obsolete GO:0052495)","synonyms":[{"name":"occlusion by organism of vascular system in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052495"}


id: PBO:0061878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oocyte secreted protein 1 pseudogene 2","termid":"PBO:0061878"}


id: GO:0015525
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete carbonyl cyanide m-chlorophenylhydrazone/nalidixic acid/organomercurials:hydrogen antiporter activity (obsolete GO:0015525)","synonyms":[{"name":"carbonyl cyanide m-chlorophenylhydrazone/nalidixic acid/organomercurials:hydrogen antiporter activity","type":"exact"},{"name":"carbonyl cyanide m-chlorophenylhydrazone/nalidixic acid/organomercurials:proton antiporter activity","type":"exact"}],"termid":"GO:0015525"}


id: PBO:0046403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythrocyte membrane protein band 4.2","termid":"PBO:0046403"}


id: MONDO:0011778
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple epiphyseal dysplasia, Al-Gazali type is a skeletal dysplasia characterized by multiple epiphyseal dysplasia, macrocephaly and facial dysmorphism.","definition_xrefs":["Orphanet:166024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple epiphyseal dysplasia","termid":"MONDO:0016648"},{"relation_name":"is_a","term_name":"KIF7-related ciliopathy","termid":"MONDO:0800463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"multiple epiphyseal dysplasia, Al-Gazali type","secondary_identifiers":["MEDGEN:335505","SCTID:719688002","UMLS:C1846722","icd11.foundation:1359939784","ICD10CM:Q77.3","MESH:C564621","OMIM:607131","GARD:17014"],"synonyms":[{"name":"AGBK","type":"related"},{"name":"AL-Gazali-BAKALINOVA syndrome","type":"related"},{"name":"Al-Gazali-Bakalinova syndrome","type":"related"},{"name":"Mmedf","type":"related"},{"name":"macrocephaly with multiple epiphyseal dysplasia and distinctive facies","type":"related"},{"name":"multiple epiphyseal dysplasia-macrocephaly-distinctive facies syndrome","type":"exact"}],"termid":"MONDO:0011778","xrefs":{"Monarch":{"xref_id":"0011778"}}}


id: GO:0033060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The deposition or aggregation of coloring matter in an ocellus, a minute simple eye found in many invertebrates.","definition_xrefs":["GOC:mtg_MIT_16mar07"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigmentation","termid":"GO:0043473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ocellus pigmentation","termid":"GO:0033060"}


id: GO:0050877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An organ system process carried out by any of the organs or tissues of the neurological system.","definition_xrefs":["GOC:ai","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system process","termid":"GO:0003008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nervous system process","synonyms":[{"name":"neurological system process","type":"exact"},{"name":"neurophysiological process","type":"exact"},{"name":"pan-neural process","type":"related"}],"termid":"GO:0050877"}


id: MONDO:0019188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare malformation syndrome characterized by congenital anomalies (microcephaly, specific facial characteristics, broad thumbs and halluces and postnatal growth retardation), short stature, intellectual disability and behavioral characteristics.","definition_xrefs":["Orphanet:783"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"excluded_subClassOf","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic genetic obesity (obsolete MONDO:0016565)","termid":"MONDO:0016565"},{"relation_name":"excluded_subClassOf","term_name":"obsolete inherited nervous system cancer-predisposing syndrome (obsolete MONDO:0016756)","termid":"MONDO:0016756"},{"relation_name":"excluded_subClassOf","term_name":"obsolete lens shape anomaly (obsolete MONDO:0020237)","termid":"MONDO:0020237"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"autosomal dominant syndromic intellectual disability","termid":"MONDO:0100601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0002320","MONDO:0005497"],"is_obsolete":false,"name":"Rubinstein-Taybi syndrome","secondary_identifiers":["DOID:1933","ICD9:759.89","OMIMPS:180849","GARD:7593","NORD:1682","DECIPHER:7","SCTID:45582004","UMLS:C0035934","NANDO:1200461","icd11.foundation:692585833","MEDGEN:48517","NCIT:C75466","MedDRA:10039281","MESH:D012415","NANDO:2200955"],"synonyms":[{"name":"Broad thumb-hallux syndrome","type":"exact"},{"name":"Broad thumbs-halluces syndrome","type":"exact"},{"name":"RSTS","type":"related"},{"name":"Rubinstein syndrome","type":"exact"},{"name":"Rubinstein-Taybi Syndrome","type":"exact"},{"name":"proximal chromosome 16p13.3 deletion syndrome","type":"exact"}],"termid":"MONDO:0019188","xrefs":{"Monarch":{"xref_id":"0019188"}}}


id: PBO:0064489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I subunit B","termid":"PBO:0064489"}


id: MONDO:0004546
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the lumbar nerve plexus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lumbosacral plexus lesion","termid":"MONDO:0001829"},{"relation_name":"is_a","term_name":"nerve plexus neoplasm","termid":"MONDO:0003100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"lumbar plexus neoplasm","secondary_identifiers":["MEDGEN:272802","NCIT:C5824","UMLS:C1334437","DOID:8389"],"synonyms":[{"name":"lumbar nerve plexus neoplasm","type":"exact"},{"name":"lumbar nerve plexus neoplasm (disease)","type":"exact"},{"name":"lumbar nerve plexus tumor","type":"exact"},{"name":"lumbar nerve plexus tumour","type":"exact"},{"name":"lumbar plexus neoplasms","type":"exact"},{"name":"lumbar plexus tumor","type":"exact"},{"name":"lumbar plexus tumour","type":"exact"},{"name":"neoplasm of lumbar nerve plexus","type":"exact"},{"name":"neoplasm of lumbar plexus","type":"exact"},{"name":"neoplasm of the lumbar plexus","type":"exact"},{"name":"tumor of lumbar nerve plexus","type":"exact"},{"name":"tumor of lumbar plexus","type":"exact"},{"name":"tumor of the lumbar plexus","type":"exact"},{"name":"tumour of lumbar nerve plexus","type":"exact"},{"name":"tumour of lumbar plexus","type":"exact"},{"name":"tumour of the lumbar plexus","type":"exact"}],"termid":"MONDO:0004546","xrefs":{"Monarch":{"xref_id":"0004546"}}}


id: PBO:0056898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migration and invasion enhancer 1","termid":"PBO:0056898"}


id: MONDO:1010094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Analphalipoproteinaemia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism, non-human animal","termid":"MONDO:1012979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"analphalipoproteinaemia, non-human animal","secondary_identifiers":["OMIA:000042"],"termid":"MONDO:1010094","xrefs":{"Monarch":{"xref_id":"1010094"}}}


id: GO:1905358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of snRNA pseudouridine synthesis.","definition_xrefs":["GO_REF:0000058","PMID:27268497","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of RNA metabolic process","termid":"GO:0051254"},{"relation_name":"is_a","term_name":"regulation of snRNA pseudouridine synthesis","termid":"GO:1905356"},{"relation_name":"positively_regulates","term_name":"snRNA pseudouridine synthesis","termid":"GO:0031120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0016073"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016073"}],"interesting_parent_ids":["GO:0008150","GO:0016073"],"is_obsolete":false,"name":"positive regulation of snRNA pseudouridine synthesis","synonyms":[{"name":"activation of snRNA pseudouridine synthesis","type":"narrow"},{"name":"up regulation of snRNA pseudouridine synthesis","type":"exact"},{"name":"up-regulation of snRNA pseudouridine synthesis","type":"exact"},{"name":"upregulation of snRNA pseudouridine synthesis","type":"exact"}],"termid":"GO:1905358"}


id: FYPO:0005203
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to ethionine. Cells stop growing (and may die) at a concentration of ethionine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to ethionine","synonyms":[{"name":"hypersensitive to ethionine","type":"exact"},{"name":"sensitive to DL-ethionine","type":"related"},{"name":"sensitive to S-ethylhomocysteine","type":"exact"},{"name":"sensitive to ethionine during mitotic cell cycle","type":"related"},{"name":"sensitive to ethionine during vegetative growth","type":"exact"}],"termid":"FYPO:0005203"}


id: PBO:0054225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1607","termid":"PBO:0054225"}


id: MONDO:0023073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Eosinophilic cystitis (EC) is a rare inflammatory bladder condition caused by the build up of eosinophils in the bladder. The exact cause of this condition is not known. However, EC has been found in those with allergies and asthma, and in those with a history of bladder trauma or infection, open bladder surgery, or surgery for a bladder tumor. EC has also been found in those who take certain medications.","definition_xrefs":["GARD:0006347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystitis","termid":"MONDO:0006032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eosinophilic cryptitis","secondary_identifiers":["ICD9:595.89","MEDGEN:148162","SCTID:445918001","UMLS:C0742965"],"synonyms":[{"name":"eosinophilic cystitis","type":"related"}],"termid":"MONDO:0023073","xrefs":{"Monarch":{"xref_id":"0023073"}}}


id: FYPO:0001002
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell does not undergo the normal two rounds of cell division prior to entering quiescence (G0).","definition_xrefs":["PomBase:mah","PMID:19366728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal G1 to G0 transition","termid":"FYPO:0000427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished cell division prior to G0 entry","synonyms":[{"name":"cell division prior to G0 entry abolished","type":"exact"},{"name":"loss of pre-quiescence cell divisions following nitrogen starvation","type":"exact"}],"termid":"FYPO:0001002"}


id: PBO:0078435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon TCC) 2-5","termid":"PBO:0078435"}


id: PBO:0030894
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleus_localization_during_vegetative_growth","termid":"PBO:0030894"}


id: MONDO:0002485
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm that arises from the breast and is composed of cells of neuroendocrine origin. Most cases are neuroendocrine carcinomas. Primary carcinoid tumors of the breast are very rare.","definition_xrefs":["NCIT:C5169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroendocrine neoplasm","termid":"MONDO:0019496"},{"relation_name":"is_a","term_name":"breast neoplasm","termid":"MONDO:0021100"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast neuroendocrine neoplasm","secondary_identifiers":["DOID:3009","MEDGEN:231969","UMLS:C1332635"],"synonyms":[{"name":"breast NET","type":"exact"},{"name":"breast endocrine neoplasm","type":"exact"},{"name":"breast neuroendocrine neoplasm","type":"exact"},{"name":"breast neuroendocrine tumor","type":"exact"},{"name":"breast neuroendocrine tumor, well differentiated, low or intermediate grade","type":"exact"},{"name":"breast neuroendocrine tumour","type":"exact"},{"name":"neuroendocrine neoplasm of breast","type":"exact"},{"name":"neuroendocrine neoplasm of the breast","type":"exact"},{"name":"neuroendocrine tumor of the breast","type":"exact"},{"name":"neuroendocrine tumour of the breast","type":"exact"}],"termid":"MONDO:0002485","xrefs":{"Monarch":{"xref_id":"0002485"}}}


id: GO:0045121
data:
  {"annotated_genes":["SJAG_04001","SJAG_03536","SJAG_04620","SJAG_04714"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[105074,90259,91148,120407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044853"}]},"cv_name":"cellular_component","definition":"Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions.","definition_xrefs":["PMID:20044567","PMID:16645198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane microdomain","termid":"GO:0098857"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03536":null,"SJAG_04001":null,"SJAG_04620":null,"SJAG_04714":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"membrane raft","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Lipid_raft"],"synonyms":[{"name":"GEM domain","type":"related"},{"name":"glycolipid-enriched membrane domain","type":"related"},{"name":"lipid raft","type":"exact"}],"termid":"GO:0045121","terms_by_termid":{"GO:0044853":null}}


id: FYPO:0001195
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of galactomannan measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased polysaccharide level during vegetative growth","termid":"FYPO:0001080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased galactomannan level","synonyms":[{"name":"decreased cellular galactomannan level","type":"exact"},{"name":"decreased galactomannan accumulation","type":"related"},{"name":"decreased galactomannan level during mitotic cell cycle","type":"related"},{"name":"decreased galactomannan level during vegetative growth","type":"exact"},{"name":"reduced galactomannan level","type":"exact"}],"termid":"FYPO:0001195"}


id: PBO:0078784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 9-1","termid":"PBO:0078784"}


id: PBO:0029945
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_tapered_vegetative_cell_population_(obsolete_FYPO:0002292)","termid":"PBO:0029945"}


id: PBO:0032739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human FAM32A homolog, implicated in splicing","termid":"PBO:0032739"}


id: GO:0051876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of pigment granules within a cell towards the cell periphery.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of pigment granule localization","termid":"GO:0051905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"pigment granule dispersal","termid":"GO:0051876"}


id: MONDO:0010722
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"X-linked retinal dysplasia","secondary_identifiers":["GARD:4680","MEDGEN:909011","OMIM:312550","UMLS:C4275241","Orphanet:1852","SCTID:715240000"],"synonyms":[{"name":"PRD","type":"related"},{"name":"retinal dysplasia X-linked","type":"related"},{"name":"retinal dysplasia, primary","type":"related"}],"termid":"MONDO:0010722","xrefs":{"Monarch":{"xref_id":"0010722"}}}


id: GO:0080020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving coenzyme A.","definition_xrefs":["PMID:18621975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound metabolic process","termid":"GO:0019219"},{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"coenzyme A biosynthetic process","termid":"GO:0015937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"regulation of coenzyme A biosynthetic process","termid":"GO:0080020"}


id: PBO:0027118
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_zygotic_meiosis_II","termid":"PBO:0027118"}


id: MONDO:0011710
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"specific language impairment","termid":"MONDO:0000724"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"specific language impairment 1","secondary_identifiers":["MEDGEN:339804","OMIM:606711","UMLS:C1847614"],"synonyms":[{"name":"SLI1","type":"exact"},{"name":"specific language impairment 1","type":"exact"},{"name":"specific language impairment QTL, 1","type":"exact"},{"name":"specific language impairment quantitative trait locus on chromosome 16","type":"related"}],"termid":"MONDO:0011710","xrefs":{"Monarch":{"xref_id":"0011710"}}}


id: PBO:0063088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progestin and adipoQ receptor family member 6","termid":"PBO:0063088"}


id: MONDO:1011715
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudocholinesterase deficiency, non-human animal","secondary_identifiers":["OMIA:001205"],"termid":"MONDO:1011715","xrefs":{"Monarch":{"xref_id":"1011715"}}}


id: FYPO:0006717
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing sodium chloride, usually at a higher level than in standard media.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002058","FYPO:0000139","FYPO:0000003","FYPO:0002060","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on sodium chloride","synonyms":[{"name":"normal cell population growth in presence of sodium chloride","type":"exact"},{"name":"normal cell population growth on sodium chloride","type":"exact"},{"name":"normal cellular response to sodium chloride","type":"related"},{"name":"normal growth on NaCl","type":"exact"},{"name":"normal vegetative cell population growth on sodium chloride","type":"exact"}],"termid":"FYPO:0006717"}


id: GO:1902557
data:
  {"annotated_genes":["SJAG_03334"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103183],"is_not":false,"summary":null,"term":"GO:1902557"}]},"cv_name":"molecular_function","definition":"Enables the transfer of 5'-adenylyl sulfate from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie","PMID:24296033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenine nucleotide transmembrane transporter activity","termid":"GO:0000295"},{"relation_name":"is_a","term_name":"purine ribonucleotide transmembrane transporter activity","termid":"GO:0005346"},{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"5'-adenylyl sulfate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902557","terms_by_termid":{"GO:1902557":null}}


id: PBO:0002200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retromer complex subunit Vps29","termid":"PBO:0002200"}


id: GO:0017032
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: amino acid(out) + K+(out) = amino acid(in) + K+(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:monoatomic cation symporter activity","termid":"GO:0005416"},{"relation_name":"is_a","term_name":"potassium ion transmembrane transporter activity","termid":"GO:0015079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"amino acid:potassium symporter activity","synonyms":[{"name":"potassium:amino acid symporter activity","type":"exact"}],"termid":"GO:0017032"}


id: PBO:0083852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exosome non-catalytic core component; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; predicted to contain an S1 RNA binding domain; human homolog EXOSC1 partially complements yeast csl4 null mutant, and can complement inviability of strain in which expression of CSL4 is repressed","termid":"PBO:0083852"}


id: MONDO:0700088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paroxysmal non-kinesigenic dyskinesia (PNKD) is a form of paroxysmal dyskinesia, characterized by attacks of dystonic or choreathetotic movements precipitated by stress, fatigue, coffee or alcohol intake or menstruation.","definition_xrefs":["Orphanet:98810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paroxysmal dyskinesia","termid":"MONDO:0015427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"paroxysmal nonkinesigenic dyskinesia","secondary_identifiers":["MEDGEN:401504","GARD:8722","UMLS:C1869117"],"synonyms":[{"name":"DYT-MR-1","type":"related"},{"name":"Paroxysomal nonkinesigenic dyskinesia","type":"related"},{"name":"Paroxystic non-kinesigenic choreoathetosis","type":"exact"},{"name":"paroxysmal non-kinesigenic dyskinesia","type":"related"}],"termid":"MONDO:0700088","xrefs":{"Monarch":{"xref_id":"0700088"}}}


id: PBO:0054471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1871","termid":"PBO:0054471"}


id: GO:0051537
data:
  {"annotated_genes":["SJAG_00822","SJAG_00601","SJAG_02016","SJAG_01417","SJAG_03701","SJAG_00532","SJAG_00792","SJAG_04016","SJAG_00244","SJAG_00217","SJAG_01935","SJAG_02474","SJAG_04397","SJAG_02495","SJAG_01841","SJAG_00455","SJAG_04098","SJAG_00260"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58957,64996,66907,67764,68808,70933,70981,73122,76019,79926,81077,81590,89878,95872,102307,116601,116912,118497],"is_not":false,"summary":null,"term":"GO:0051537"}]},"cv_name":"molecular_function","definition":"Binding to a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands.","definition_xrefs":["GOC:ai","PMID:15952888","Wikipedia:Iron-sulfur_cluster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster binding","termid":"GO:0051536"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00217":null,"SJAG_00244":null,"SJAG_00260":null,"SJAG_00455":null,"SJAG_00532":null,"SJAG_00601":null,"SJAG_00792":null,"SJAG_00822":null,"SJAG_01417":null,"SJAG_01841":null,"SJAG_01935":null,"SJAG_02016":null,"SJAG_02474":null,"SJAG_02495":null,"SJAG_03701":null,"SJAG_04016":null,"SJAG_04098":null,"SJAG_04397":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"2 iron, 2 sulfur cluster binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"2 Fe 2 S cluster binding","type":"exact"},{"name":"2 iron, 2 sulphur cluster binding","type":"exact"},{"name":"2Fe-2S cluster binding","type":"exact"},{"name":"diiron disulfide cluster binding","type":"exact"},{"name":"diiron disulphide cluster binding","type":"exact"},{"name":"iron-sulfur cluster 2Fe-2S binding","type":"exact"},{"name":"iron-sulphur cluster 2Fe-2S binding","type":"exact"}],"termid":"GO:0051537","terms_by_termid":{"GO:0051537":null}}


id: FYPO:0007086
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is elongated when the cell is subject to sulfur starvation.","definition_xrefs":["PMID:28388826","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable elongated vegetative cell","termid":"FYPO:0001492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000004","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"elongated vegetative cell during sulfur starvation","synonyms":[{"name":"elongated cell during sulfur starvation during vegetative growth","type":"exact"},{"name":"elongated vegetative cell during cellular response to sulfur starvation","type":"exact"},{"name":"elongated vegetative cell during sulfur starvation during mitotic cell cycle","type":"related"},{"name":"elongated vegetative cell during sulphur starvation","type":"exact"}],"termid":"FYPO:0007086"}


id: MONDO:0013534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"apolipoprotein c-III deficiency","secondary_identifiers":["DOID:0111370","MESH:C566270","GARD:18076","OMIM:614028","UMLS:C3151467","MEDGEN:462817"],"synonyms":[{"name":"apolipoprotein c-III deficiency","type":"exact"},{"name":"hyperalphalipoproteinemia 2","type":"related"}],"termid":"MONDO:0013534","xrefs":{"Monarch":{"xref_id":"0013534"}}}


id: GO:1990246
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A calcium channel complex in the mitochondrial inner membrane capable of highly-selective calcium channel activity. Its components include the EF-hand-containing proteins mitochondrial calcium uptake 1 (MICU1) and MICU2, the pore-forming subunit mitochondrial calcium uniporter (MCU) and its paralog MCUb, and the MCU regulator EMRE.","definition_xrefs":["PMID:24231807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium channel complex","termid":"GO:0034704"},{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005739","GO:0005575"],"is_obsolete":false,"name":"uniplex complex","synonyms":[{"name":"mitochondrial uniporter complex","type":"exact"},{"name":"mitochondrial uniporter holocomplex","type":"exact"}],"termid":"GO:1990246"}


id: PBO:0040422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit d2","termid":"PBO:0040422"}


id: PBO:0030259
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_chloramphenicol","termid":"PBO:0030259"}


id: PATO:0000694
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a process which starts earlier than the natural start time or the reference process.","definition_xrefs":["PATO:LC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"onset quality","termid":"PATO:0002325"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"premature","secondary_identifiers":["PATO:0002086","PATO:0000691"],"synonyms":[{"name":"advanced","type":"exact"},{"name":"early","type":"related"},{"name":"precocious","type":"related"}],"termid":"PATO:0000694"}


id: PBO:0003279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFG1 family mitochondrial ATPase (predicted)","termid":"PBO:0003279"}


id: GO:1904562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phosphatidylinositol 5-phosphate.","definition_xrefs":["GOC:TermGenie","GOC:dph","PMID:23916588","GOC:autophagy","GOC:pad","GO_REF:0000068","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol metabolic process","termid":"GO:0046488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylinositol 5-phosphate metabolic process","synonyms":[{"name":"phosphatidylinositol 5-phosphate metabolism","type":"exact"}],"termid":"GO:1904562"}


id: PBO:0040373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk subunit d pseudogene 1","termid":"PBO:0040373"}


id: PBO:0052910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 13-2","termid":"PBO:0052910"}


id: GO:1990930
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the oxidative demethylation of N1-methyladenosine RNA, with concomitant decarboxylation of 2-oxoglutarate and releases oxidized methyl group on N1-methyladenosine as formaldehyde.","definition_xrefs":["PMID:26863410","PMID:26863196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidative RNA demethylase activity","termid":"GO:0035515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674","GO:0140098"],"is_obsolete":false,"name":"mRNA N1-methyladenosine dioxygenase activity","secondary_identifiers":["RHEA:49516","EC:1.14.11.54"],"synonyms":[{"name":"RNA N(1)-methyladenosine dioxygenase activity","type":"related"},{"name":"RNA N1-methyladenosine dioxygenase activity","type":"related"}],"termid":"GO:1990930"}


id: MONDO:0000988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Discharge or drainage of fluid from the ear.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auditory system disorder","termid":"MONDO:0002409"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discharging ear","secondary_identifiers":["ICD9:388.6","ICD9:388.60","DOID:10261","UMLS:C0155540","MEDGEN:57608"],"termid":"MONDO:0000988","xrefs":{"Monarch":{"xref_id":"0000988"}}}


id: GO:2001092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an arabinotrioseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisaccharide transport","termid":"GO:2001088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"arabinotriose transport","termid":"GO:2001092"}


id: GO:0018256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a formyl group to a protein amino acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acylation","termid":"GO:0043543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein formylation","synonyms":[{"name":"protein amino acid formylation","type":"exact"}],"termid":"GO:0018256"}


id: PBO:0069050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 296, pseudogene","termid":"PBO:0069050"}


id: GO:0102794
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cinnamaldehyde + O2 + H2O = H+ + trans-cinnamate + hydrogen peroxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cinnamaldehyde:oxygen oxidoreductase activity (obsolete GO:0102794)","termid":"GO:0102794"}


id: PBO:0048998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glypican 6","termid":"PBO:0048998"}


id: PBO:0035693
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-acts_upstream_of","termid":"PBO:0035693"}


id: PBO:0042000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 51","termid":"PBO:0042000"}


id: GO:0046929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of a neurotransmitter.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotransmitter secretion","termid":"GO:0046928"},{"relation_name":"is_a","term_name":"negative regulation of neurotransmitter transport","termid":"GO:0051589"},{"relation_name":"is_a","term_name":"negative regulation of secretion by cell","termid":"GO:1903531"},{"relation_name":"negatively_regulates","term_name":"neurotransmitter secretion","termid":"GO:0007269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"negative regulation of neurotransmitter secretion","synonyms":[{"name":"conotoxin activity","type":"narrow"},{"name":"down regulation of neurotransmitter secretion","type":"exact"},{"name":"down-regulation of neurotransmitter secretion","type":"exact"},{"name":"downregulation of neurotransmitter secretion","type":"exact"},{"name":"inhibition of neurotransmitter secretion","type":"narrow"}],"termid":"GO:0046929"}


id: PBO:0084726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane protein; role in mitophagy is disputed; implicated in cell wall biogenesis, the oxidative stress response, life span during starvation, and cell death; SUN family member; UTH1 has a paralog, NCA3, that arose from the whole genome duplication","termid":"PBO:0084726"}


id: PBO:0063563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PELP1 divergent transcript","termid":"PBO:0063563"}


id: PBO:0038999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFAP1 antisense RNA 1","termid":"PBO:0038999"}


id: PBO:0072975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 2A member 1","termid":"PBO:0072975"}


id: GO:0010751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of nitric oxide mediated signal transduction. Nitric oxide mediated signal transduction is The series of molecular signals mediated by the detection of nitric oxide (NO).","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nitric oxide mediated signal transduction","termid":"GO:0010749"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"nitric oxide mediated signal transduction","termid":"GO:0007263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of nitric oxide mediated signal transduction","synonyms":[{"name":"negative regulation of nitric oxide-mediated signal transduction","type":"exact"}],"termid":"GO:0010751"}


id: GO:0070368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of hepatocyte differentiation.","definition_xrefs":["GOC:mah","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of hepatocyte differentiation","termid":"GO:0070366"},{"relation_name":"positively_regulates","term_name":"hepatocyte differentiation","termid":"GO:0070365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hepatocyte differentiation","synonyms":[{"name":"activation of hepatocyte differentiation","type":"narrow"},{"name":"positive regulation of liver cell differentiation","type":"exact"},{"name":"stimulation of hepatocyte differentiation","type":"narrow"},{"name":"up regulation of hepatocyte differentiation","type":"exact"},{"name":"up-regulation of hepatocyte differentiation","type":"exact"},{"name":"upregulation of hepatocyte differentiation","type":"exact"}],"termid":"GO:0070368"}


id: PBO:0041747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAMTA1 divergent transcript","termid":"PBO:0041747"}


id: MONDO:0008526
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"talonavicular coalition","secondary_identifiers":["MESH:C536895","MEDGEN:350002","OMIM:186750","UMLS:C1861296"],"synonyms":[{"name":"talonavicular coalition","type":"exact"}],"termid":"MONDO:0008526","xrefs":{"Monarch":{"xref_id":"0008526"}}}


id: PBO:0030213
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_oxidative_stress","termid":"PBO:0030213"}


id: GO:0051284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the binding or confining calcium ions such that they are separated from other components of a biological system.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of sequestering of calcium ion","termid":"GO:0051282"},{"relation_name":"positively_regulates","term_name":"sequestering of calcium ion","termid":"GO:0051208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sequestering of calcium ion","synonyms":[{"name":"activation of sequestering of calcium ion","type":"narrow"},{"name":"positive regulation of calcium ion (Ca2+) retention","type":"exact"},{"name":"positive regulation of calcium ion (Ca2+) sequestering","type":"exact"},{"name":"positive regulation of calcium ion (Ca2+) sequestration","type":"exact"},{"name":"positive regulation of calcium ion (Ca2+) storage","type":"exact"},{"name":"positive regulation of retention of calcium ion (Ca2+)","type":"exact"},{"name":"positive regulation of sequestering of calcium ion (Ca2+)","type":"exact"},{"name":"positive regulation of sequestration of calcium ion (Ca2+)","type":"exact"},{"name":"positive regulation of storage of calcium ion (Ca2+)","type":"exact"},{"name":"stimulation of sequestering of calcium ion","type":"narrow"},{"name":"up regulation of sequestering of calcium ion","type":"exact"},{"name":"up-regulation of sequestering of calcium ion","type":"exact"},{"name":"upregulation of sequestering of calcium ion","type":"exact"}],"termid":"GO:0051284"}


id: PBO:0081722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 652","termid":"PBO:0081722"}


id: PBO:0061249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitric oxide synthase 2 pseudogene 1","termid":"PBO:0061249"}


id: MONDO:0010546
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central incisors, absence of","secondary_identifiers":["OMIM:302400","MEDGEN:337110","UMLS:C1844886"],"synonyms":[{"name":"central incisors, absence of","type":"exact"}],"termid":"MONDO:0010546","xrefs":{"Monarch":{"xref_id":"0010546"}}}


id: GO:0016634
data:
  {"annotated_genes":["SJAG_04944","SJAG_02876"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004109"},{"annotations":[74291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004729"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces oxygen.","definition_xrefs":["EC:1.3.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02876":null,"SJAG_04944":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0016634","terms_by_termid":{"GO:0004109":null,"GO:0004729":null}}


id: GO:0001807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of type IV hypersensitivity, a type of inflammatory response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell mediated immunity","termid":"GO:0002709"},{"relation_name":"is_a","term_name":"regulation of hypersensitivity","termid":"GO:0002883"},{"relation_name":"regulates","term_name":"type IV hypersensitivity","termid":"GO:0001806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of type IV hypersensitivity","termid":"GO:0001807"}


id: PBO:0047164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 192 member B, pseudogene","termid":"PBO:0047164"}


id: PATO:0001188
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A maturity quality inhering in a bearer by virtue of the bearer's being in an inactive stage in the development of some insects, between the larval and the pupal stages.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity","termid":"PATO:0000261"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prepupal","termid":"PATO:0001188"}


id: PBO:0119655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex TPR repeat subunit (chaperone receptor) Tom70","termid":"PBO:0119655"}


id: PR:Q9Y7L2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC2A9.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7L2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA methyltransferase C2A9.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2A9.10","synonyms":[{"name":"Spom972h-SPBC2A9.10","type":"exact"}],"termid":"PR:Q9Y7L2"}


id: SO:0001717
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A histone modification site on H2B where ubiquitin may be added.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_ubiqitination_site","termid":"SO:0001716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H2B_ubiquitination_site","synonyms":[{"name":"H2BUbiq","type":"related"}],"termid":"SO:0001717"}


id: PBO:0085319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol 3-phosphate (PI3P) phosphatase; involved in various protein sorting pathways, including CVT targeting and endosome to vacuole transport; has similarity to the conserved myotubularin dual specificity phosphatase family","termid":"PBO:0085319"}


id: PBO:0074439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 40","termid":"PBO:0074439"}


id: GO:0050923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of a motile cell or organism towards a lower concentration in a concentration gradient of a specific chemical.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"regulates","term_name":"negative chemotaxis","termid":"GO:0050919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of negative chemotaxis","termid":"GO:0050923"}


id: PBO:0069397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 657, pseudogene","termid":"PBO:0069397"}


id: GO:0018651
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: toluene-4-sulfonate + 1/2 O2 + H+ = HSO3(-) + 4-hydroxytoluene.","definition_xrefs":["UM-BBD_reactionID:r0296"],"gene_count":0,"genotype_count":0,"name":"obsolete toluene-4-sulfonate monooxygenase activity (obsolete GO:0018651)","synonyms":[{"name":"toluene-4-sulphonate monooxygenase activity","type":"exact"}],"termid":"GO:0018651"}


id: GO:0033734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-2-benzylsuccinyl-CoA + 2 electron-transferring flavoprotein = (E)-2-benzylidenesuccinyl-CoA + 2 reduced electron-transferring flavoprotein.","definition_xrefs":["EC:1.3.8.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor","termid":"GO:0052890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(R)-benzylsuccinyl-CoA dehydrogenase activity","secondary_identifiers":["RHEA:20876","UM-BBD_reactionID:r0330"],"synonyms":[{"name":"(R)-benzylsuccinyl-CoA:(acceptor) oxidoreductase activity","type":"related"},{"name":"(R)-benzylsuccinyl-CoA:acceptor oxidoreductase activity","type":"related"},{"name":"BbsG","type":"related"}],"termid":"GO:0033734"}


id: PBO:0031906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICOS complex subunit Mic19","termid":"PBO:0031906"}


id: MONDO:0004354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Leukemia that occurs during the neonatal period.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood leukemia","termid":"MONDO:0004355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"neonatal leukemia","secondary_identifiers":["DOID:7756","MEDGEN:116003","UMLS:C0235813","NCIT:C3845"],"synonyms":[{"name":"neonatal leukemia","type":"exact"}],"termid":"MONDO:0004354","xrefs":{"Monarch":{"xref_id":"0004354"}}}


id: MONDO:0008473
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare type of spondyloepiphyseal dysplasia described in fewer than 10 patients to date and characterized clinically by dysplastic epiphyses, short stature appearing in infancy, short neck, short and stubby hands and feet, scoliosis, genu valgum, abnormal pelvis, osteoporosis and osteoarthritis.","definition_xrefs":["Orphanet:263482"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"is_a","term_name":"TRPV4-related bone disorder","termid":"MONDO:0018240"},{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia","termid":"MONDO:0100510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia, Maroteaux type","secondary_identifiers":["OMIM:184095","DOID:0111553","SCTID:719204007","GARD:994","MEDGEN:463613","UMLS:C3159322"],"synonyms":[{"name":"SED, Maroteaux type","type":"exact"},{"name":"brachyolmia Maroteaux type","type":"related"},{"name":"pseudo-Morquio syndrome type 2","type":"exact"},{"name":"pseudo-Morquio syndrome, type 2","type":"related"},{"name":"spondyloepimetaphyseal dysplasia, Maroteaux type","type":"exact"},{"name":"spondyloepiphyseal dysplasia Maroteaux type","type":"exact"},{"name":"spondyloepiphyseal dysplasia, Maroteaux type","type":"exact"}],"termid":"MONDO:0008473","xrefs":{"Monarch":{"xref_id":"0008473"}}}


id: GO:1900014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell in response to the presence of 3',5'-cAMP that results in a change in state or activity (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus.","definition_xrefs":["GOC:pf","GOC:TermGenie","PMID:21239624","PMID:8937985","PMID:19363786"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to calcium ion involved in chemotaxis to cAMP (obsolete GO:1900014)","synonyms":[{"name":"cellular response to Ca2+ ion of chemotaxis to 3',5' cAMP","type":"exact"},{"name":"cellular response to Ca2+ ion of chemotaxis to 3',5'-cAMP","type":"exact"},{"name":"cellular response to Ca2+ ion of chemotaxis to adenosine 3',5'-cyclophosphate","type":"exact"},{"name":"cellular response to Ca2+ ion of chemotaxis to cAMP","type":"related"},{"name":"cellular response to Ca2+ ion of chemotaxis to cyclic AMP","type":"exact"},{"name":"cellular response to calcium ion involved in chemotaxis to cAMP","type":"exact"},{"name":"cellular response to calcium ion of chemotaxis to 3',5' cAMP","type":"related"},{"name":"cellular response to calcium ion of chemotaxis to 3',5'-cAMP","type":"related"},{"name":"cellular response to calcium ion of chemotaxis to adenosine 3',5'-cyclophosphate","type":"related"},{"name":"cellular response to calcium ion of chemotaxis to cAMP","type":"related"},{"name":"cellular response to calcium ion of chemotaxis to cyclic AMP","type":"related"}],"termid":"GO:1900014"}


id: PBO:0067852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 154","termid":"PBO:0067852"}


id: GO:0043927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of the transcript body of a nuclear-transcribed mRNA that occurs when the ends are not protected by the 5'-cap.","definition_xrefs":["GOC:mtg_mpo"],"gene_count":0,"genotype_count":0,"name":"obsolete exonucleolytic nuclear-transcribed mRNA catabolic process involved in endonucleolytic cleavage-dependent decay (obsolete GO:0043927)","termid":"GO:0043927"}


id: PBO:0003569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3H and G-patch domain, implicated in splicing (predicted)","termid":"PBO:0003569"}


id: GO:0090030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of steroid hormones,compounds with a 1, 2, cyclopentanoperhydrophenanthrene nucleus that act as hormones.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hormone biosynthetic process","termid":"GO:0046885"},{"relation_name":"is_a","term_name":"regulation of steroid biosynthetic process","termid":"GO:0050810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of steroid hormone biosynthetic process","termid":"GO:0090030"}


id: GO:1903002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lipid transport across blood-brain barrier.","definition_xrefs":["GOC:sjp","GOC:TermGenie","PMID:24345162","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"positive regulation of transport across blood-brain barrier","termid":"GO:0150201"},{"relation_name":"is_a","term_name":"regulation of lipid transport across blood-brain barrier","termid":"GO:1903000"},{"relation_name":"positively_regulates","term_name":"lipid transport across blood-brain barrier","termid":"GO:1990379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of lipid transport across blood-brain barrier","synonyms":[{"name":"activation of lipid transport across blood brain barrier","type":"narrow"},{"name":"positive regulation of lipid transport across blood brain barrier","type":"exact"},{"name":"up regulation of lipid transport across blood brain barrier","type":"exact"},{"name":"up-regulation of lipid transport across blood brain barrier","type":"exact"},{"name":"upregulation of lipid transport across blood brain barrier","type":"exact"}],"termid":"GO:1903002"}


id: PBO:0038867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine deaminase tRNA specific 1","termid":"PBO:0038867"}


id: GO:0009267
data:
  {"annotated_genes":["SJAG_04873","SJAG_03602","SJAG_00534","SJAG_04032","SJAG_00209","SJAG_00169","SJAG_00256","SJAG_02389","SJAG_02026","SJAG_04743","SJAG_00845","SJAG_01509","SJAG_03486","SJAG_04677","SJAG_03519","SJAG_03048","SJAG_01885","SJAG_02973","SJAG_04067","SJAG_00781","SJAG_01970","SJAG_03309","SJAG_02878","SJAG_00457","SJAG_02699","SJAG_02424","SJAG_00380","SJAG_02331","SJAG_02380","SJAG_01184","SJAG_03371","SJAG_01245","SJAG_02785","SJAG_02474","SJAG_02292","SJAG_00233","SJAG_04031"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73368,74271,76463,78183,78929,80083,82173,96440],"is_not":false,"summary":null,"term":"GO:0009267"},{"annotations":[75737,62914,77642,96492,73275,97039,73874,75393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034198"},{"annotations":[77792,102256,71751,58983,100239,77825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042149"},{"annotations":[114651,102304,95921,79462,59630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010106"},{"annotations":[109408,115196,73974,115195],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016036"},{"annotations":[117448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031142"},{"annotations":[68126,71094],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903833"},{"annotations":[103209,89666],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905287"},{"annotations":[104208],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1904547"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of nourishment.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nutrient levels","termid":"GO:0031669"},{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"},{"relation_name":"is_a","term_name":"response to starvation","termid":"GO:0042594"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00209":null,"SJAG_00233":null,"SJAG_00256":null,"SJAG_00380":null,"SJAG_00457":null,"SJAG_00534":null,"SJAG_00781":null,"SJAG_00845":null,"SJAG_01184":null,"SJAG_01245":null,"SJAG_01509":null,"SJAG_01885":null,"SJAG_01970":null,"SJAG_02026":null,"SJAG_02292":null,"SJAG_02331":null,"SJAG_02380":null,"SJAG_02389":null,"SJAG_02424":null,"SJAG_02474":null,"SJAG_02699":null,"SJAG_02785":null,"SJAG_02878":null,"SJAG_02973":null,"SJAG_03048":null,"SJAG_03309":null,"SJAG_03371":null,"SJAG_03486":null,"SJAG_03519":null,"SJAG_03602":null,"SJAG_04031":null,"SJAG_04032":null,"SJAG_04067":null,"SJAG_04677":null,"SJAG_04743":null,"SJAG_04873":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to starvation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-9711097"],"termid":"GO:0009267","terms_by_termid":{"GO:0009267":null,"GO:0010106":null,"GO:0016036":null,"GO:0031142":null,"GO:0034198":null,"GO:0042149":null,"GO:1903833":null,"GO:1904547":null,"GO:1905287":null}}


id: SO:0001709
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 27th residue (a lysine), from the start of the H3 histone protein is tri-methylated.","direct_ancestors":[{"relation_name":"is_a","term_name":"H3K27_methylation_site","termid":"SO:0001732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K27_trimethylation_site","synonyms":[{"name":"H3K27 tri-methylation site","type":"exact"},{"name":"H3K27Me3","type":"related"}],"termid":"SO:0001709"}


id: GO:0003809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage of Arg-Gly; activates fibrinogen to fibrin and releases fibrinopeptide A and B.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete thrombin activity (obsolete GO:0003809)","synonyms":[{"name":"E thrombin","type":"related"},{"name":"activated blood-coagulation factor II","type":"related"},{"name":"beta-thrombin","type":"related"},{"name":"blood-coagulation factor IIa","type":"related"},{"name":"factor IIa","type":"related"},{"name":"fibrinogenase activity","type":"related"},{"name":"gamma-thrombin","type":"related"},{"name":"thrombase activity","type":"related"},{"name":"thrombin activity","type":"exact"},{"name":"thrombin-C","type":"related"},{"name":"thrombofort","type":"related"},{"name":"topical","type":"related"},{"name":"tropostasin","type":"related"}],"termid":"GO:0003809"}


id: MONDO:0020646
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-Hodgkin lymphoma arising from the conjunctiva, lacrimal gland, lacrimal drainage apparatus, eyelids, or other orbital tissues around the eye. The vast majority of cases are extranodal marginal zone lymphomas of mucosa-associated lymphoid tissue, however, other histologic types of lymphomas can originate from ocular adnexal tissues, including rare cases of NK/T-cell lymphomas of nasal type.","definition_xrefs":["NCIT:C88145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye adnexa disorder","termid":"MONDO:0000462"},{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"},{"relation_name":"is_a","term_name":"non-Hodgkin lymphoma","termid":"MONDO:0018908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"ocular adnexal lymphoma","secondary_identifiers":["MEDGEN:453939","UMLS:C2981712"],"synonyms":[{"name":"OAL","type":"exact"},{"name":"non-Hodgkin lymphoma of ocular adnexa","type":"exact"},{"name":"ocular adnexa non-Hodgkin lymphoma","type":"exact"},{"name":"ocular adnexal lymphoma","type":"exact"}],"termid":"MONDO:0020646","xrefs":{"Monarch":{"xref_id":"0020646"}}}


id: GO:0010739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of protein kinase A signaling. PKA signaling is the series of reactions, mediated by the intracellular serine/threonine kinase protein kinase A, which occurs as a result of a single trigger reaction or compound.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein kinase A signaling","termid":"GO:0010738"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"protein kinase A signaling","termid":"GO:0010737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein kinase A signaling","synonyms":[{"name":"positive regulation of PKA signaling cascade","type":"related"},{"name":"positive regulation of protein kinase A signaling cascade","type":"related"},{"name":"positive regulation of protein kinase A signalling cascade","type":"related"}],"termid":"GO:0010739"}


id: GO:1903537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any meiotic cell cycle process that is involved in oocyte maturation.","definition_xrefs":["PMID:25212395","GOC:jz","GO_REF:0000060","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"oocyte maturation","termid":"GO:0001556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"meiotic cell cycle process involved in oocyte maturation","synonyms":[{"name":"meiosis involved in oocyte maturation","type":"broad"}],"termid":"GO:1903537"}


id: GO:0001763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of branches are generated and organized. A branch is a division or offshoot from a main stem. Examples in animals would include blood vessels, nerves, lymphatics and other endothelial or epithelial tubes.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"morphogenesis of a branching structure","synonyms":[{"name":"branching morphogenesis","type":"exact"}],"termid":"GO:0001763"}


id: MONDO:0016657
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"8p11.2 deletion syndrome is a contiguous gene syndrome characterized by the association of congenital spherocytosis, dysmorphic features, growth delay and hypogonadotropic hypogonadism.","definition_xrefs":["Orphanet:251066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 8","termid":"MONDO:0016890"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"8p11.2 deletion syndrome","secondary_identifiers":["MEDGEN:930174","UMLS:C4304505","SCTID:719646006","GARD:20693"],"synonyms":[{"name":"Del(8)(p11.2)","type":"exact"},{"name":"monosomy 8p11.2","type":"exact"}],"termid":"MONDO:0016657","xrefs":{"Monarch":{"xref_id":"0016657"}}}


id: PBO:0043598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XXVII alpha 1 chain","termid":"PBO:0043598"}


id: MOD:00687
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by formation of a thioether bond between a cysteine thiol and either an alkyl C as in lanthionine, or an aryl C as 2'-(S-cysteinyl)-L-histidine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"thioether crosslinked residues","termid":"MOD:00687"}


id: GO:1990869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chemokine stimulus.","definition_xrefs":["PMID:11113082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"},{"relation_name":"is_a","term_name":"response to chemokine","termid":"GO:1990868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to chemokine","termid":"GO:1990869"}


id: PBO:0085488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Proliferating cell nuclear antigen (PCNA); functions as the sliding replication clamp for DNA polymerase delta; may function as a docking site for other proteins required for mitotic and meiotic chromosomal DNA replication and for DNA repair; PCNA ubiquitination at K164 plays a crucial role during Okazaki fragment processing","termid":"PBO:0085488"}


id: PBO:0030390
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_cytoplasm_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0030390"}


id: GO:0045721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of gluconeogenesis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gluconeogenesis","termid":"GO:0006111"},{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"gluconeogenesis","termid":"GO:0006094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gluconeogenesis","synonyms":[{"name":"down regulation of gluconeogenesis","type":"exact"},{"name":"down-regulation of gluconeogenesis","type":"exact"},{"name":"downregulation of gluconeogenesis","type":"exact"},{"name":"inhibition of gluconeogenesis","type":"narrow"}],"termid":"GO:0045721"}


id: PBO:0031711
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitophagy","termid":"PBO:0031711"}


id: MONDO:0023097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete exostoses anetodermia brachydactyly type E (obsolete MONDO:0023097)","termid":"MONDO:0023097","xrefs":{"Monarch":{"xref_id":"0023097"}}}


id: MONDO:1011860
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic syndrome, non-human animal","secondary_identifiers":["OMIA:000929"],"termid":"MONDO:1011860","xrefs":{"Monarch":{"xref_id":"1011860"}}}


id: GO:0016342
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex of peripheral cytoplasmic proteins (alpha-, beta- and gamma-catenin) that interact with the cytoplasmic region of uvomorulin/E-cadherin to connect it to the actin cytoskeleton.","definition_xrefs":["ISBN:0198599323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"extrinsic component of plasma membrane","termid":"GO:0019897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"catenin complex","termid":"GO:0016342"}


id: PR:Q09778
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A hamartin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR15154:SF3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberous sclerosis 1 protein homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F3.13","secondary_identifiers":["UniProtKB:Q09778"],"synonyms":[{"name":"SPAC22F3.13","type":"related"},{"name":"Spom972h-TSC1","type":"exact"}],"termid":"PR:Q09778"}


id: PBO:0063040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAK6 antisense RNA 1","termid":"PBO:0063040"}


id: PBO:0082255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-tubulin; associates with beta-tubulin (Tub2p) to form tubulin dimer, which polymerizes to form microtubules; expressed at lower level than Tub1p; TUB3 has a paralog, TUB1, that arose from the whole genome duplication","termid":"PBO:0082255"}


id: PATO:0002062
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"physical quality of a process","termid":"PATO:0002062"}


id: PBO:0073961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 10","termid":"PBO:0073961"}


id: GO:0098864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a symbiont organism that stabilizes the its host tight cell-cell junctions, making them less dynamic. The tight junction is a cell-cell junction that seals cells together in an epithelium in a way that prevents even small molecules from leaking from one side of the sheet to the other, and plays a role in the inflammatory response of the host.","definition_xrefs":["PMID:25838979"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host tight cell-cell junction","termid":"GO:0098865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated stabilization of host tight cell-cell junction","synonyms":[{"name":"modification by symbiont of host tight cell-cell junction","type":"broad"},{"name":"stabilization of host tight cell-cell junction","type":"broad"}],"termid":"GO:0098864"}


id: PBO:0040777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bestrophin 3","termid":"PBO:0040777"}


id: SO:0001443
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-polar, hydorophilic amino acid encoded by the codons GGN (GGT, GGC, GGA and GGG).","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine","synonyms":[{"name":"G","type":"exact"},{"name":"Gly","type":"exact"}],"termid":"SO:0001443"}


id: GO:2000327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of ligand-dependent nuclear receptor transcription coactivator activity.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of nuclear receptor transcription coactivator activity (obsolete GO:2000327)","synonyms":[{"name":"positive regulation of ligand-dependent nuclear receptor transcription co-activator activity","type":"exact"},{"name":"positive regulation of ligand-dependent nuclear receptor transcription coactivator activity","type":"exact"}],"termid":"GO:2000327"}


id: PBO:0075290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin family member 30","termid":"PBO:0075290"}


id: GO:0021960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in one half of the cerebral cortex towards target cells in the contralateral half. This axonal process is a member of those that make up the anterior commissure, a small midline fiber tract that lies at the anterior end of the corpus callosum.","definition_xrefs":["GOC:dgh","GOC:cls","GO_REF:0000021","GOC:dph","GOC:jid","ISBN:0878937420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"},{"relation_name":"part_of","term_name":"telencephalon development","termid":"GO:0021537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior commissure morphogenesis","termid":"GO:0021960"}


id: MONDO:0800470
data:
  {"annotated_genes":["SJAG_04003"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012905"}]},"cv_name":"mondo","definition":"Any neurologic condition in which the cause of the disease is a mutation in the TUBB4A gene.","definition_xrefs":["PMID:35275727","PMID:28973395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"TUBB4A-related neurologic disorder","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0800470","terms_by_termid":{"MONDO:0012905":null},"xrefs":{"Monarch":{"xref_id":"0800470"}}}


id: FYPO:0009102
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain less cytoplasmic microtubules than normal during interphase of the mitotic cell cycle.","direct_ancestors":[{"relation_name":"is_a","term_name":"microtubules present in decreased numbers","termid":"FYPO:0003430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000054","FYPO:0005447","FYPO:0001985","FYPO:0002399"],"is_obsolete":false,"name":"interphase microtubules present in decreased numbers","synonyms":[{"name":"decreased number of interphase microtubules","type":"exact"},{"name":"fewer microtubules present during mitotic interphase","type":"exact"}],"termid":"FYPO:0009102"}


id: PBO:0051234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-33-1 (pseudogene)","termid":"PBO:0051234"}


id: PBO:0000097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase (predicted)","termid":"PBO:0000097"}


id: PR:000037084
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tropomyosin cdc8 homodimer (Schizosaccharomyces pombe) that is composed of two subunits of the acetylated form of tropomyosin cdc8.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropomyosin cdc8 homodimer (Schizosaccharomyces pombe)","termid":"PR:000037083"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin cdc8 homodimer, acetylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC27F1.02c","synonyms":[{"name":"Spom-(cdc8/AcRes+)*2","type":"exact"}],"termid":"PR:000037084"}


id: GO:0032460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of protein oligomerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of protein oligomerization","termid":"GO:0032459"},{"relation_name":"negatively_regulates","term_name":"protein complex oligomerization","termid":"GO:0051259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein oligomerization","synonyms":[{"name":"down regulation of protein oligomerization","type":"exact"},{"name":"down-regulation of protein oligomerization","type":"exact"},{"name":"downregulation of protein oligomerization","type":"exact"},{"name":"inhibition of protein oligomerization","type":"narrow"}],"termid":"GO:0032460"}


id: MONDO:1010569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetes insipidus that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes insipidus, non-human animal","termid":"MONDO:1010051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetes insipidus, horse","secondary_identifiers":["OMIA:000278-9796"],"termid":"MONDO:1010569","xrefs":{"Monarch":{"xref_id":"1010569"}}}


id: PBO:0031815
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_autophagy","termid":"PBO:0031815"}


id: PBO:0073939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 18 member A2","termid":"PBO:0073939"}


id: MONDO:0019134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Central neurocytoma is a very rare brain tumor of young adults (over 100 cases reported worldwide). It is typically found in the lateral ventricles and occasionally in the third ventricle. Symptoms are those of increased intracranial pressure: headache, nausea and vomiting, drowsiness, vision problems and mental changes. Total removal of the tumor is the therapy of choice. Post-operative prognosis is generally good.","definition_xrefs":["Orphanet:73256"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cerebral ventricle cancer","termid":"MONDO:0002682"},{"relation_name":"is_a","term_name":"cerebral ventricle cancer","termid":"MONDO:0002682"},{"relation_name":"is_a","term_name":"mixed neuronal-glial tumor","termid":"MONDO:0016729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"central neurocytoma","secondary_identifiers":["ICDO:9506/1","icd11.foundation:1247650801","ONCOTREE:CNC","UMLS:C0206719","icd11.foundation:2039766091","MESH:D018306","NCIT:C3791","DOID:14174","MEDGEN:104924","GARD:10641"],"synonyms":[{"name":"CNC","type":"related"},{"name":"Neurolipocytoma","type":"exact"},{"name":"central neurocytoma (WHO grade II)","type":"exact"}],"termid":"MONDO:0019134","xrefs":{"Monarch":{"xref_id":"0019134"}}}


id: PBO:0085861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the vacuole; YDL211C has a paralog, TDA7, that arose from the whole genome duplication","termid":"PBO:0085861"}


id: PBO:0005501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit Spt3","termid":"PBO:0005501"}


id: PBO:0002428
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.3.4","termid":"PBO:0002428"}


id: PBO:0081179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zymogen granule protein 16","termid":"PBO:0081179"}


id: GO:0035174
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of a phosphate group to a serine residue of a histone.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete histone serine kinase activity (obsolete GO:0035174)","synonyms":[{"name":"histone-serine kinase activity","type":"exact"}],"termid":"GO:0035174"}


id: MONDO:0007589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"FZD4-related exudative vitreoretinopathy","termid":"MONDO:1040041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"exudative vitreoretinopathy 1","secondary_identifiers":["OMIM:133780","DOID:0111412","MEDGEN:343561","MESH:C536382","GARD:15068","NCIT:C175048","UMLS:C1851402"],"synonyms":[{"name":"Criswick-Schepens syndrome","type":"related"},{"name":"EVR1","type":"related"},{"name":"FEVR, autosomal dominant","type":"related"},{"name":"exudative vitreoretinopathy 1","type":"exact"},{"name":"exudative vitreoretinopathy type 1","type":"exact"},{"name":"exudative vitreoretinopathy, familial, autosomal dominant","type":"related"},{"name":"retinopathy of prematurity","type":"related"}],"termid":"MONDO:0007589","xrefs":{"Monarch":{"xref_id":"0007589"}}}


id: PBO:0039218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member D1","termid":"PBO:0039218"}


id: PBO:0043725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C pseudogene 4","termid":"PBO:0043725"}


id: PBO:0004694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi membrane exchange factor subunit Sat1 (predicted)","termid":"PBO:0004694"}


id: GO:0075025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell starts to acquire specialized features of the symbiont appressorium to aid in infection of the host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of structure involved in a symbiotic process","termid":"GO:0044111"},{"relation_name":"part_of","term_name":"appressorium formation","termid":"GO:0075016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"initiation of appressorium formation","synonyms":[{"name":"appressorium initiation on or near host","type":"exact"},{"name":"initiation of appressorium by symbiont on or near host","type":"exact"},{"name":"initiation of appressorium on or near host","type":"related"},{"name":"initiation of symbiont appressorium on or near host","type":"exact"}],"termid":"GO:0075025"}


id: MONDO:0800209
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital fibrosis of extraocular muscles","termid":"MONDO:0007614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"fibrosis of extraocular muscles, congenital, 3b","secondary_identifiers":["UMLS:C2751105","MEDGEN:416468"],"synonyms":[{"name":"CFEOM3B","type":"exact"}],"termid":"MONDO:0800209","xrefs":{"Monarch":{"xref_id":"0800209"}}}


id: FYECO:0000365
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were blocked using carbendazim (MBC) and subsequently released from the block.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping condition combinations","termid":"FYECO:0000238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBC block and release","termid":"FYECO:0000365"}


id: GO:0055043
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-oxovalerate + NADP+ + H2O = glutarate + NADPH + H+.","definition_xrefs":["GOC:mlg","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"5-oxovalerate dehydrogenase activity","termid":"GO:0055043"}


id: MONDO:0015142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ataxia syndrome (obsolete MONDO:0015142)","termid":"MONDO:0015142","xrefs":{"Monarch":{"xref_id":"0015142"}}}


id: PBO:0056505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP3K12 binding inhibitory protein 1","termid":"PBO:0056505"}


id: FYPO:0007642
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the dimethylation of lysine at position 9 of histone H3 occurs to a lower extent than normal at ribosomal DNA during G0 phase.","definition_xrefs":["PomBase:mah","PMID:27738016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation during G0","termid":"FYPO:0007641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation at rDNA during G0","synonyms":[{"name":"decreased histone H3 K9 dimethylation at rDNA during G0","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at rDNA during cell quiescence","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at rDNA during quiescence","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at ribosomal DNA during G0","type":"exact"},{"name":"decreased histone H3K9 dimethylation at rDNA during G0","type":"exact"},{"name":"decreased histone H3K9me2 dimethylation at rDNA during G0","type":"exact"},{"name":"reduced histone H3-K9 dimethylation at rDNA during G0","type":"exact"}],"termid":"FYPO:0007642"}


id: PBO:0049165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 4 pseudogene 7","termid":"PBO:0049165"}


id: GO:0102050
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: indole-3-acetate + L-tyrosine + ATP(4-) = H+ + indole-3-acetyl-tyrosine + AMP(2-) + diphosphoric acid.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete indole-3-acetyl-tyrosine synthetase activity (obsolete GO:0102050)","termid":"GO:0102050"}


id: PATO:0001478
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being broken down; caved in.","definition_xrefs":["Dictionary.com:Dictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collapsed","termid":"PATO:0001478"}


id: MONDO:0017230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"familial partial lipodystrophy","termid":"MONDO:0020088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"autosomal semi-dominant severe lipodystrophic laminopathy","secondary_identifiers":["UMLS:C5680783","GARD:21080","MEDGEN:1808090","Orphanet:280365"],"termid":"MONDO:0017230","xrefs":{"Monarch":{"xref_id":"0017230"}}}


id: MONDO:0014687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the HGSNAT gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"HGSNAT-related retinopathy","termid":"MONDO:1040040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 73","secondary_identifiers":["ICD10CM:H35.5","MEDGEN:907690","OMIM:616544","UMLS:C4225287","DOID:0110389","GARD:16135"],"synonyms":[{"name":"HGSNAT retinitis pigmentosa","type":"exact"},{"name":"RP73","type":"exact"},{"name":"retinitis pigmentosa 73","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in HGSNAT","type":"exact"},{"name":"retinitis pigmentosa type 73","type":"exact"}],"termid":"MONDO:0014687","xrefs":{"Monarch":{"xref_id":"0014687"}}}


id: GO:0019656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the enzymatic breakdown of D-glucose to D-lactate and ethanol, yielding energy in the form of adenosine triphosphate (ATP) at the rate of one ATP per glucose molecule.","definition_xrefs":["MetaCyc:P122-PWY","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethanol metabolic process","termid":"GO:0006067"},{"relation_name":"is_a","term_name":"glucose catabolic process to lactate","termid":"GO:0019659"},{"relation_name":"is_a","term_name":"non-glycolytic fermentation","termid":"GO:0019662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006091","GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"glucose catabolic process to D-lactate and ethanol","synonyms":[{"name":"glucose fermentation to D-lactate and ethanol","type":"exact"},{"name":"heterofermentation","type":"exact"},{"name":"heterofermentative lactate fermentation","type":"exact"},{"name":"heterofermentative pathway","type":"exact"},{"name":"heterolactate fermentation","type":"exact"},{"name":"heterolactic fermentation","type":"exact"}],"termid":"GO:0019656"}


id: GO:0008499
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an N-acetyl-beta-D-glucosaminyl derivative + UDP-alpha-D-galactose = a beta-D-galactosyl-(1->3)-N-acetyl-beta-D-glucosaminyl derivative + H+ + UDP.","definition_xrefs":["PMID:10212226","RHEA:53432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"},{"relation_name":"is_a","term_name":"beta-1,3-galactosyltransferase activity","termid":"GO:0048531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"N-acetyl-beta-D-glucosaminide beta-(1,3)-galactosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.86-RXN","Reactome:R-HSA-914010","EC:2.4.1.86","Reactome:R-HSA-9603989","Reactome:R-HSA-9845516"],"synonyms":[{"name":"UDP-Gal:beta-GlcNAc beta-1,3-galactosyltransferase activity","type":"exact"},{"name":"UDP-galactose beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity","type":"exact"},{"name":"UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity","type":"exact"},{"name":"beta-1,3-GalTase activity","type":"broad"},{"name":"beta3Gal-Ts activity","type":"broad"}],"termid":"GO:0008499"}


id: GO:0014841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of satellite cells, resulting in the expansion of the cell population. Satellite cells are quiescent cells that are located between the basal lamina and the plasmalemma of the muscle fiber, which are the main contributors to postnatal muscle growth. In adult muscle, satellite cells become activated to divide and differentiate in response to muscle damage.","definition_xrefs":["PMID:16607119","GOC:ef","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle cell proliferation","termid":"GO:0014856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle satellite cell proliferation","termid":"GO:0014841"}


id: GO:0047036
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: codeine + NADP+ = codeinone + H+ + NADPH.","definition_xrefs":["RHEA:19209","EC:1.1.1.247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"codeinone reductase (NADPH) activity","secondary_identifiers":["MetaCyc:1.1.1.247-RXN","KEGG_REACTION:R05124"],"synonyms":[{"name":"codeine:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0047036"}


id: GO:0102712
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A13 + 2-oxoglutarate + O2 = gibberellin A43 + succinate + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gibberellin A13,oxoglutarate:oxygen oxidoreductase activity (obsolete GO:0102712)","termid":"GO:0102712"}


id: PBO:0005313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin Atg20 (predicted)","termid":"PBO:0005313"}


id: PBO:0047471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follicular dendritic cell secreted protein","termid":"PBO:0047471"}


id: GO:0047260
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-D-glucose + glucose-6-phosphate = alpha,alpha-trehalose 6-phosphate + GDP.","definition_xrefs":["MetaCyc:2.4.1.36-RXN","EC:2.4.1.36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"alpha,alpha-trehalose-phosphate synthase (GDP-forming) activity","secondary_identifiers":["RHEA:14605"],"synonyms":[{"name":"GDP-glucose-glucosephosphate glucosyltransferase activity","type":"related"},{"name":"GDP-glucose:D-glucose-6-phosphate 1-alpha-D-glucosyltransferase activity","type":"related"},{"name":"GDPglucose-glucose-phosphate glucosyltransferase activity","type":"related"},{"name":"GDPglucose:D-glucose-6-phosphate 1-alpha-D-glucosyltransferase activity","type":"related"},{"name":"guanosine diphosphoglucose-glucose phosphate glucosyltransferase activity","type":"related"},{"name":"trehalose phosphate synthase (GDP-forming) activity","type":"related"}],"termid":"GO:0047260"}


id: PBO:0041841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer susceptibility 21","termid":"PBO:0041841"}


id: PBO:0090712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase SIN pathway Cdc7","termid":"PBO:0090712"}


id: PBO:0090597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-GATA-type","termid":"PBO:0090597"}


id: PBO:0073848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member A3","termid":"PBO:0073848"}


id: PBO:0029489
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_abnormal_cell_shape,_normal_cell_size_(obsolete_FYPO:0002226)","termid":"PBO:0029489"}


id: GO:0032194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of ubiquinone, via the intermediates 3,4-dihydroxy-5-polyprenylbenzoate and 3-methoxy-4-hydroxy-5-polyprenylbenzoate.","definition_xrefs":["GOC:mah","PMID:11583838"],"gene_count":0,"genotype_count":0,"name":"obsolete ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate (obsolete GO:0032194)","termid":"GO:0032194"}


id: MONDO:0005424
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Enlargement of an area of the body due to obstruction within the lymphatic system and the resulting accumulation of lymph.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphedema","termid":"MONDO:0019297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"elephantiasis","secondary_identifiers":["EFO:0004711","DOID:4976","MEDGEN:8582","MESH:D004604","UMLS:C0013882","SCTID:240820001"],"termid":"MONDO:0005424","xrefs":{"Monarch":{"xref_id":"0005424"}}}


id: FYPO:0004694
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which DNA is broken into small fragments when the population in which the cell is found is in stationary phase.","definition_xrefs":["PomBase:mah","PMID:12963726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fragmented DNA","termid":"FYPO:0000160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"fragmented DNA during stationary phase","synonyms":[{"name":"DNA fragmentation during stationary phase","type":"exact"},{"name":"fragmented nucleus during stationary phase","type":"related"}],"termid":"FYPO:0004694"}


id: SO:0001229
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified RNA base in which the 5- position of the uracil is bound to the ribose ring instead of the 4- position.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine","secondary_identifiers":["http://en.wikipedia.org/wiki/Pseudouridine","RNAMOD:050"],"synonyms":[{"name":" Y","type":"exact"}],"termid":"SO:0001229"}


id: PBO:0073957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 6","termid":"PBO:0073957"}


id: FYPO:0006807
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the glycan moiety of a glycoprotein found at the cell surface contains a lower amount of galactose residues than normal. In wild-type cells, glycoprotein glycans contain mannose and galactose residues in a 1:1.2 ratio, and the galactose residues are connected by alpha-1,2 linkages.","definition_xrefs":["PomBase:mah","PMID:9839953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased galactose level in glycoprotein glycan","termid":"FYPO:0003354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0003290"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0002494"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0003290","FYPO:0002274","FYPO:0001320","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"decreased galactose level in cell surface glycoprotein glycan","synonyms":[{"name":"decreased cell surface protein glycan galactosylation","type":"related"},{"name":"decreased galactose level in cell surface glycoprotein oligosaccharide","type":"related"},{"name":"decreased galactose level in glycoprotein glycan at cell surface","type":"exact"},{"name":"decreased level of alpha 1,2-linked galactose residues in cell surface glycoprotein glycan","type":"exact"},{"name":"reduced galactose level in cell surface glycoprotein glycan","type":"exact"}],"termid":"FYPO:0006807"}


id: FYPO:0005296
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad52 (also called Rad22) accumulates is greater than normal during S phase of the mitotic cell cycle.","definition_xrefs":["PMID:18045993","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of Rad52 foci during vegetative growth","termid":"FYPO:0000972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased number of Rad52 foci during mitotic S phase","synonyms":[{"name":"increased number of Rad22 foci during mitotic S phase","type":"exact"},{"name":"increased number of Rad52 foci during S phase of mitotic cell cycle","type":"exact"},{"name":"increased number of Rad52 foci during mitotic S phase during vegetative growth","type":"exact"}],"termid":"FYPO:0005296"}


id: MONDO:0013057
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"psoriasis, susceptibility to","termid":"MONDO:0100171"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psoriasis 12, susceptibility to","secondary_identifiers":["DOID:0111291","MEDGEN:414124","UMLS:C2751854","OMIM:612950"],"synonyms":[{"name":"PSORS12","type":"exact"},{"name":"psoriasis 12, susceptibility to","type":"exact"},{"name":"psoriasis susceptibility 12","type":"exact"}],"termid":"MONDO:0013057","xrefs":{"Monarch":{"xref_id":"0013057"}}}


id: PBO:0039416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angel homolog 1","termid":"PBO:0039416"}


id: GO:0001128
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an RNA polymerase II (RNAP II) regulatory transcription factor and also with the RNAP II basal transcription machinery in order to increase the frequency, rate or stability of the aggregation, arrangement and bonding together of proteins on RNA polymerase II promoter DNA to form the transcriptional preinitiation complex (PIC). Cofactors generally do not bind DNA, but rather mediate protein-protein interactions between activating transcription factors and the basal RNAP II transcription machinery.","definition_xrefs":["GOC:txnOH","PMID:16858867"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase II transcription coactivator activity involved in preinitiation complex assembly (obsolete GO:0001128)","synonyms":[{"name":"RNA polymerase II transcription coactivator activity involved in preinitiation complex assembly","type":"exact"}],"termid":"GO:0001128"}


id: PBO:0073485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingomyelin synthase 2","termid":"PBO:0073485"}


id: MONDO:0007138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anterior segment dysgenesis","termid":"MONDO:0019503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"anterior segment dysgenesis 1","secondary_identifiers":["DOID:0060605","MEDGEN:1631197","DOID:0080606","UMLS:C4551992","OMIM:107250"],"synonyms":[{"name":"ASGD1","type":"related"},{"name":"ASMD","type":"related"},{"name":"anterior segment dysgenesis 1","type":"exact"},{"name":"anterior segment dysgenesis 1, multiple subtypes","type":"exact"},{"name":"anterior segment mesenchymal dysgenesis","type":"related"},{"name":"anterior segment ocular dysgenesis","type":"related"}],"termid":"MONDO:0007138","xrefs":{"Monarch":{"xref_id":"0007138"}}}


id: GO:0002795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antimicrobial peptide secretion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antimicrobial peptide production","termid":"GO:0002785"},{"relation_name":"is_a","term_name":"negative regulation of peptide secretion","termid":"GO:0002792"},{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide secretion","termid":"GO:0002794"},{"relation_name":"negatively_regulates","term_name":"antimicrobial peptide secretion","termid":"GO:0002776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of antimicrobial peptide secretion","synonyms":[{"name":"down regulation of antimicrobial peptide secretion","type":"exact"},{"name":"down-regulation of antimicrobial peptide secretion","type":"exact"},{"name":"downregulation of antimicrobial peptide secretion","type":"exact"},{"name":"inhibition of antimicrobial peptide secretion","type":"narrow"}],"termid":"GO:0002795"}


id: GO:0004474
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + glyoxylate + H2O = (S)-malate + CoA + H+.","definition_xrefs":["RHEA:18181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"malate synthase activity","secondary_identifiers":["EC:2.3.3.9","MetaCyc:MALSYN-RXN","KEGG_REACTION:R00472"],"synonyms":[{"name":"L-malate glyoxylate-lyase (CoA-acetylating) activity","type":"related"},{"name":"acetyl-CoA:glyoxylate C-acetyltransferase (thioester-hydrolysing, carboxymethyl-forming)","type":"related"},{"name":"glyoxylate transacetase activity","type":"related"},{"name":"glyoxylate transacetylase activity","type":"related"},{"name":"glyoxylic transacetase activity","type":"related"},{"name":"malate condensing enzyme activity","type":"related"},{"name":"malate synthetase activity","type":"related"},{"name":"malic synthetase activity","type":"related"},{"name":"malic-condensing enzyme activity","type":"related"}],"termid":"GO:0004474"}


id: PBO:0066431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RERG intronic transcript 1","termid":"PBO:0066431"}


id: PBO:0070985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 9","termid":"PBO:0070985"}


id: GO:0044079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts the regulated release of a neurotransmitter from a cell in its host organism.","definition_xrefs":["MITRE:tk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host neurotransmitter secretion","synonyms":[{"name":"modification by symbiont of host neurotransmitter secretion","type":"exact"},{"name":"modulation by symbiont of host neurotransmitter secretion","type":"exact"},{"name":"modulation of host neurotransmitter secretion by symbiont","type":"exact"},{"name":"regulation by symbiont of host neurotransmitter secretion","type":"exact"}],"termid":"GO:0044079"}


id: GO:0070354
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the zinc finger transcription factor GATA2, the LIM domain protein Lmo2 (RBTN2), the basic helix-loop-helix protein TAL1 and its binding partner TCF3. The complex is involved transcriptional regulation in hematopoiesis.","definition_xrefs":["PMID:7568177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"GATA2-TAL1-TCF3-Lmo2 complex","termid":"GO:0070354"}


id: PBO:0068373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 166","termid":"PBO:0068373"}


id: MONDO:0019616
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete germinoma of the central nervous system (obsolete MONDO:0019616)","termid":"MONDO:0019616","xrefs":{"Monarch":{"xref_id":"0019616"}}}


id: PBO:0043426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclic nucleotide gated channel subunit alpha 4","termid":"PBO:0043426"}


id: FYPO:0005130
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which spores germinate to a lower extent than wild type following exposure to heat.","definition_xrefs":["PomBase:mah","PMID:24623719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"spores sensitive to heat","termid":"FYPO:0005130"}


id: SO:0000779
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An episome that is engineered.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"is_a","term_name":"engineered_plasmid","termid":"SO:0000637"},{"relation_name":"is_a","term_name":"episome","termid":"SO:0000768"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_episome","synonyms":[{"name":"engineered episome","type":"exact"}],"termid":"SO:0000779"}


id: PBO:0082971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein that regulates protein phosphatase 1 Glc7p; protein overexpression relocalizes Glc7p from the nucleus and prevents chromosome segregation; potential Cdc28p substrate","termid":"PBO:0082971"}


id: PBO:0062567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily AF member 1 pseudogene","termid":"PBO:0062567"}


id: PBO:0000504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Aut12 (predicted)","termid":"PBO:0000504"}


id: PBO:0042987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"checkpoint kinase 2","termid":"PBO:0042987"}


id: MONDO:0100342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A grade III or grade IV glioma arising from the central nervous system. This category includes glioblastoma, anaplastic astrocytoma, anaplastic ependymoma, anaplastic oligodendroglioma, and anaplastic oligoastrocytoma.","definition_xrefs":["NCIT:C4822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system cancer","termid":"MONDO:0002714"},{"relation_name":"is_a","term_name":"high grade malignant neoplasm","termid":"MONDO:0020665"},{"relation_name":"is_a","term_name":"glioma","termid":"MONDO:0021042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant glioma","secondary_identifiers":["MEDGEN:107826","UMLS:C0555198","DOID:3070","MedDRA:10018338","ICDO:9380/3"],"synonyms":[{"name":"glial cell tumor","type":"exact"},{"name":"glial cell tumour","type":"exact"},{"name":"glioma","type":"broad"},{"name":"glioma, malignant","type":"exact"},{"name":"high grade glioma","type":"exact"},{"name":"high-grade glioma","type":"exact"},{"name":"malignant glial neoplasm","type":"exact"},{"name":"malignant glial tumor","type":"exact"},{"name":"malignant glial tumour","type":"exact"},{"name":"malignant glioma","type":"exact"},{"name":"malignant neuroglial neoplasm","type":"exact"},{"name":"malignant neuroglial tumor","type":"exact"},{"name":"malignant neuroglial tumour","type":"exact"},{"name":"neuroglial tumor","type":"broad"},{"name":"neuroglial tumour","type":"broad"}],"termid":"MONDO:0100342","xrefs":{"Monarch":{"xref_id":"0100342"}}}


id: PBO:0076133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUB1 pseudogene 4","termid":"PBO:0076133"}


id: GO:0052680
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (+)-epi-isozizaene + diphosphate.","definition_xrefs":["RHEA:25992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"epi-isozizaene synthase activity","secondary_identifiers":["MetaCyc:RXN-9349","EC:4.2.3.37","KEGG_REACTION:R07830"],"synonyms":[{"name":"(2E,6E)-farnesyl-diphosphate diphosphate-lyase [(+)-epi-isozizaene-forming] activity","type":"exact"}],"termid":"GO:0052680"}


id: PBO:0087805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tap42p-interacting protein; negative regulator of the TORC1 signaling pathway that activates the type 2A-related phosphatase Sit4p by binding and antagonizing Tap42p, a SIT4 inhibitor; proposed to be part of a feedback loop to amplify Sit4p activity when TORC1 is inactivated; protein abundance increases in response to DNA replication stress","termid":"PBO:0087805"}


id: MONDO:0007680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multinodular goiter - cystic kidney - polydactyly syndrome is a very rare syndrome characterized by the association of multinodular goiter, cystic renal disease and digital anomalies.","definition_xrefs":["Orphanet:2091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multinodular goiter-cystic kidney-polydactyly syndrome","secondary_identifiers":["OMIM:138790","MESH:C535986","UMLS:C1841853","GARD:1671","SCTID:723409007","MEDGEN:333929"],"synonyms":[{"name":"Daneman Davy Mancer syndrome","type":"related"},{"name":"Daneman-Davy-Mancer syndrome","type":"exact"},{"name":"MNG/CRD/Da","type":"related"},{"name":"goiter, multinodular, cystic renal disease, and digital anomalies","type":"related"},{"name":"multinodular goiter - cystic kidney - polydactyly","type":"related"},{"name":"multinodular goiter, cystic renal disease, and digital anomalies","type":"related"},{"name":"multinodular goiter/cystic renal disease/digital anomalies","type":"related"},{"name":"multinodular goitre - cystic kidney - polydactyly","type":"related"},{"name":"thyroid-renal-digital anomalies","type":"exact"}],"termid":"MONDO:0007680","xrefs":{"Monarch":{"xref_id":"0007680"}}}


id: PBO:0029192
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-merotelic_kinetochore_attachment","termid":"PBO:0029192"}


id: MONDO:0859150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Prader-Willi-like syndrome","termid":"MONDO:0018354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"BDV syndrome","secondary_identifiers":["UMLS:C5543403","OMIM:619326","Orphanet:633028","MEDGEN:1785671"],"synonyms":[{"name":"CPE-related Prader-Willi-like syndrome","type":"exact"}],"termid":"MONDO:0859150","xrefs":{"Monarch":{"xref_id":"0859150"}}}


id: PATO:0001537
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A solubility quality inhering in a substance by virtue of the bearer's disposition to dissolve in a liquid.","definition_xrefs":["edp:edp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solubility","termid":"PATO:0001536"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"soluble in","synonyms":[{"name":"soluble","type":"exact"}],"termid":"PATO:0001537"}


id: FYPO:0006126
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an interaction between a protein and polyadenylated RNA (poly(A) RNA) is normal (i.e. indistinguishable from wild type). One of the relevant gene products may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein-RNA interaction","termid":"FYPO:0002357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002131"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0002131"],"is_obsolete":false,"name":"normal poly(A) RNA binding","synonyms":[{"name":"normal polyA RNA binding","type":"exact"},{"name":"normal polyadenylated RNA binding","type":"exact"},{"name":"normal protein-poly(A) RNA interaction","type":"exact"}],"termid":"FYPO:0006126"}


id: PBO:0113402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transcription factor; induces superficial pseudohyphal growth, positively regulates invasive growth, but is not required for invasive pseudohyphal growth; may act together with Phd1p; promotes cell adhesion independent of Flo11p by repressing genes that encode cell wall degrading enzymes; localizes to the nucleus; potential Cdc28p substrate","termid":"PBO:0113402"}


id: PBO:0087836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Thioredoxin peroxidase; acts as both ribosome-associated and free cytoplasmic antioxidant; self-associates to form a HMW chaperone complex under oxidative stress; chaperone activity essential for growth in zinc deficiency; hydrogen peroxide receptor and signal transducer in a light sensing pathway; required for telomere length maintenance; binds and modulates Cdc19p activity; protein abundance increases and forms cytoplasmic foci during DNA replication stress","termid":"PBO:0087836"}


id: GO:0120322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A lipid modification process in which one or more groups of a small protein, such as ubiquitin or a ubiquitin-like protein, are covalently attached to a target lipid.","definition_xrefs":["PMID:34012115","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid modification","termid":"GO:0030258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lipid modification by small protein conjugation","termid":"GO:0120322"}


id: GO:0070861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of proteins from the endoplasmic reticulum.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular protein transport","termid":"GO:0033157"},{"relation_name":"regulates","term_name":"protein exit from endoplasmic reticulum","termid":"GO:0032527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of protein exit from endoplasmic reticulum","synonyms":[{"name":"regulation of protein exit from ER","type":"exact"},{"name":"regulation of protein export from ER","type":"exact"},{"name":"regulation of protein export from endoplasmic reticulum","type":"exact"}],"termid":"GO:0070861"}


id: SO:1000048
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal translocation with two breaks; two chromosome segments have simply been exchanged.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_translocation","termid":"SO:1000044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reciprocal_chromosomal_translocation","synonyms":[{"name":"reciprocal chromosomal translocation","type":"exact"}],"termid":"SO:1000048"}


id: GO:0009170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving purine deoxyribonucleoside monophosphate, a compound consisting of a purine base linked to a deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside monophosphate metabolic process","termid":"GO:0009126"},{"relation_name":"is_a","term_name":"deoxyribonucleoside monophosphate metabolic process","termid":"GO:0009162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"purine deoxyribonucleoside monophosphate metabolic process","synonyms":[{"name":"purine deoxyribonucleoside monophosphate metabolism","type":"exact"}],"termid":"GO:0009170"}


id: MONDO:0007149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete arbitrary restriction polymorphism 1 (obsolete MONDO:0007149)","secondary_identifiers":["OMIM:107750"],"synonyms":[{"name":"Arp-14A","type":"related"},{"name":"Rflp-14A","type":"related"},{"name":"anonymous restriction polymorphism 1","type":"related"},{"name":"arbitrary restriction polymorphism 1","type":"exact"},{"name":"arbitrary restriction polymorphism type 1","type":"exact"},{"name":"restriction fragment length polymorphism 14A","type":"related"}],"termid":"MONDO:0007149","xrefs":{"Monarch":{"xref_id":"0007149"}}}


id: MONDO:0007571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary erythermalgia is characterized by intermittent attacks of red, warm, painful burning extremities. It spontaneously arises during early childhood and adolescence in the absence of any detectable underlying disorder.","definition_xrefs":["Orphanet:90026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"erythromelalgia","termid":"MONDO:0016028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary erythermalgia","secondary_identifiers":["MEDGEN:8688","SCTID:709489006","UMLS:C0014805","NCIT:C125383","GARD:6377","OMIM:133020"],"synonyms":[{"name":"Mitchell disease (formerly)","type":"related"},{"name":"PERYTHM","type":"exact"},{"name":"erythermalgia, primary","type":"related"},{"name":"erythromelalgia, familial","type":"related"},{"name":"erythromelalgia, primary","type":"related"},{"name":"neuropathy, small fiber","type":"related"},{"name":"neuropathy, small fibre","type":"related"},{"name":"primary erythromelalgia","type":"exact"},{"name":"small fiber neuropathy","type":"related"},{"name":"small fibre neuropathy","type":"related"}],"termid":"MONDO:0007571","xrefs":{"Monarch":{"xref_id":"0007571"}}}


id: GO:0001586
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with serotonin and transmitting the signal across the membrane by activation of the Gi/o subunit of an associated cytoplasmic heterotrimeric G protein complex. The Gi/o subunit subsequently inhibits adenylate cyclase and results in a decrease in cyclic AMP (cAMP) levels.","definition_xrefs":["GOC:mah","PMID:18571247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor activity","termid":"GO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"Gi/o-coupled serotonin receptor activity","synonyms":[{"name":"5-HT1 receptor activity","type":"exact"},{"name":"serotonin receptor activity, coupled via Gi/o","type":"exact"}],"termid":"GO:0001586"}


id: GO:2000855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mineralocorticoid secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of corticosteroid hormone secretion","termid":"GO:2000846"},{"relation_name":"regulates","term_name":"mineralocorticoid secretion","termid":"GO:0035931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of mineralocorticoid secretion","termid":"GO:2000855"}


id: PBO:0035934
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_lysine_methylation_during_vegetative_growth","termid":"PBO:0035934"}


id: GO:0047692
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O = ITP + NH3.","definition_xrefs":["EC:3.5.4.18","MetaCyc:ATP-DEAMINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine-phosphate deaminase activity","termid":"GO:0047623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"ATP deaminase activity","secondary_identifiers":["RHEA:13037"],"synonyms":[{"name":"ATP aminohydrolase activity","type":"related"},{"name":"adenosine triphosphate deaminase activity","type":"related"}],"termid":"GO:0047692"}


id: PBO:0083512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF ERG7/YHR072W","termid":"PBO:0083512"}


id: PBO:0001674
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRACILE syndrome","termid":"PBO:0001674"}


id: GO:0060470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that increases the concentration of calcium ions in the cytosol after fertilization or the physiological activation of an egg.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytosolic calcium ion concentration","termid":"GO:0007204"},{"relation_name":"part_of","term_name":"egg activation","termid":"GO:0007343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cytosolic calcium ion concentration involved in egg activation","synonyms":[{"name":"elevation of cytosolic calcium ion concentration involved in egg activation","type":"exact"}],"termid":"GO:0060470"}


id: GO:1905524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein autoubiquitination.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:bc","GOC:PARL","PMID:17237821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein ubiquitination","termid":"GO:0031397"},{"relation_name":"is_a","term_name":"regulation of protein autoubiquitination","termid":"GO:1902498"},{"relation_name":"negatively_regulates","term_name":"protein autoubiquitination","termid":"GO:0051865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"negatively_regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein autoubiquitination","synonyms":[{"name":"down regulation of protein auto-ubiquitination","type":"exact"},{"name":"down regulation of protein auto-ubiquitinylation","type":"exact"},{"name":"down regulation of protein autoubiquitination","type":"exact"},{"name":"down regulation of protein autoubiquitinylation","type":"exact"},{"name":"down regulation of protein self-ubiquitination","type":"exact"},{"name":"down regulation of protein self-ubiquitinylation","type":"exact"},{"name":"down-regulation of protein auto-ubiquitination","type":"exact"},{"name":"down-regulation of protein auto-ubiquitinylation","type":"exact"},{"name":"down-regulation of protein autoubiquitination","type":"exact"},{"name":"down-regulation of protein autoubiquitinylation","type":"exact"},{"name":"down-regulation of protein self-ubiquitination","type":"exact"},{"name":"down-regulation of protein self-ubiquitinylation","type":"exact"},{"name":"downregulation of protein auto-ubiquitination","type":"exact"},{"name":"downregulation of protein auto-ubiquitinylation","type":"exact"},{"name":"downregulation of protein autoubiquitination","type":"exact"},{"name":"downregulation of protein autoubiquitinylation","type":"exact"},{"name":"downregulation of protein self-ubiquitination","type":"exact"},{"name":"downregulation of protein self-ubiquitinylation","type":"exact"},{"name":"inhibition of protein auto-ubiquitination","type":"narrow"},{"name":"inhibition of protein auto-ubiquitinylation","type":"narrow"},{"name":"inhibition of protein autoubiquitination","type":"narrow"},{"name":"inhibition of protein autoubiquitinylation","type":"narrow"},{"name":"inhibition of protein self-ubiquitination","type":"narrow"},{"name":"inhibition of protein self-ubiquitinylation","type":"narrow"},{"name":"negative regulation of protein auto-ubiquitination","type":"exact"},{"name":"negative regulation of protein auto-ubiquitinylation","type":"exact"},{"name":"negative regulation of protein autoubiquitinylation","type":"exact"},{"name":"negative regulation of protein self-ubiquitination","type":"exact"},{"name":"negative regulation of protein self-ubiquitinylation","type":"exact"}],"termid":"GO:1905524"}


id: PBO:0040136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating signal cointegrator 1 complex subunit 2","termid":"PBO:0040136"}


id: PR:Q9C0Z7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps602 gene.","definition_xrefs":["UniProtKB:Q9C0Z7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S6-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1E7.12","synonyms":[{"name":"Spom972h-rps602","type":"exact"}],"termid":"PR:Q9C0Z7"}


id: GO:0048203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which vesicles are directed to specific destination membranes during transport from the trans-Golgi to the endosome.","definition_xrefs":["ISBN:0716731363","GOC:jid","PMID:10219233","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle targeting, to, from or within Golgi","termid":"GO:0048199"},{"relation_name":"part_of","term_name":"Golgi to endosome transport","termid":"GO:0006895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"vesicle targeting, trans-Golgi to endosome","synonyms":[{"name":"trans-Golgi to endosome targeting","type":"exact"}],"termid":"GO:0048203"}


id: GO:0042407
data:
  {"annotated_genes":["SJAG_04237","SJAG_02501","SJAG_03282","SJAG_02002","SJAG_05241","SJAG_02028"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76800,80363,80739,91311,103521,109153],"is_not":false,"summary":null,"term":"GO:0042407"}]},"cv_name":"biological_process","definition":"The assembly of cristae, the inwards folds of the inner mitochondrial membrane.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane organization","termid":"GO:0007007"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02002":null,"SJAG_02028":null,"SJAG_02501":null,"SJAG_03282":null,"SJAG_04237":null,"SJAG_05241":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007005","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"cristae formation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8949613"],"termid":"GO:0042407","terms_by_termid":{"GO:0042407":null}}


id: MOD:00597
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because Unimod entry 277 redundant with Unimod 39. Remap to MOD:00110.","definition_xrefs":["Unimod:277"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00597 methyl methanethiosulfonate (obsolete MOD:00597)","termid":"MOD:00597"}


id: GO:0019904
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a specific domain of a protein.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"protein domain specific binding","synonyms":[{"name":"protein domain-specific binding","type":"exact"}],"termid":"GO:0019904"}


id: MONDO:0009453
data:
  {"annotated_genes":["SJAG_02528","SJAG_01884","SJAG_00400","SJAG_01697","SJAG_01787","SJAG_00222","SJAG_02208","SJAG_02572","SJAG_04743","SJAG_02330","SJAG_03805","SJAG_04118","SJAG_03536","SJAG_02803","SJAG_00610","SJAG_02039","SJAG_00771","SJAG_03453","SJAG_02184","SJAG_02479","SJAG_04380","SJAG_02453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030519"},{"annotations":[87128],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012429"},{"annotations":[86957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012471"},{"annotations":[86960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012472"},{"annotations":[87048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014007"},{"annotations":[88444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013767"},{"annotations":[87602,87603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:8000024"},{"annotations":[88090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012146"},{"annotations":[87458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011336"},{"annotations":[88414],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013135"},{"annotations":[88168,88166,88167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010066"},{"annotations":[87853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010600"},{"annotations":[87764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011997"},{"annotations":[86841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011971"},{"annotations":[87085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010504"},{"annotations":[87886,87887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958013"},{"annotations":[88218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024541"},{"annotations":[88069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013818"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inborn error of immunity","termid":"MONDO:0003778"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00222":null,"SJAG_00400":null,"SJAG_00610":null,"SJAG_00771":null,"SJAG_01697":null,"SJAG_01787":null,"SJAG_01884":null,"SJAG_02039":null,"SJAG_02184":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02453":null,"SJAG_02479":null,"SJAG_02528":null,"SJAG_02572":null,"SJAG_02803":null,"SJAG_03453":null,"SJAG_03536":null,"SJAG_03805":null,"SJAG_04118":null,"SJAG_04380":null,"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immune deficiency disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:340961","MESH:C565469","OMIM:242850","UMLS:C1855771"],"synonyms":[{"name":"immune deficiency disease","type":"exact"}],"termid":"MONDO:0009453","terms_by_termid":{"MONDO:0010066":null,"MONDO:0010504":null,"MONDO:0010600":null,"MONDO:0011336":null,"MONDO:0011971":null,"MONDO:0011997":null,"MONDO:0012146":null,"MONDO:0012429":null,"MONDO:0012471":null,"MONDO:0012472":null,"MONDO:0013135":null,"MONDO:0013767":null,"MONDO:0013818":null,"MONDO:0014007":null,"MONDO:0024541":null,"MONDO:0030519":null,"MONDO:0958013":null,"MONDO:8000024":null},"xrefs":{"Monarch":{"xref_id":"0009453"}}}


id: PBO:0065655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type F","termid":"PBO:0065655"}


id: GO:0005145
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an interleukin-14 receptor.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete interleukin-14 receptor binding (obsolete GO:0005145)","synonyms":[{"name":"IL-14","type":"narrow"},{"name":"interleukin-14 receptor ligand","type":"narrow"}],"termid":"GO:0005145"}


id: PBO:0071280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 3","termid":"PBO:0071280"}


id: MONDO:0018156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 3","termid":"MONDO:0016902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3q26q27 microdeletion syndrome","secondary_identifiers":["MEDGEN:1668723","GARD:21534","UMLS:C4755255","Orphanet:356947"],"synonyms":[{"name":"3q26-q27microdeletion syndrome","type":"exact"},{"name":"Del(3)(q26q27)","type":"exact"},{"name":"monosomy 3q26-q27","type":"exact"},{"name":"monosomy 3q26q27","type":"exact"}],"termid":"MONDO:0018156","xrefs":{"Monarch":{"xref_id":"0018156"}}}


id: MONDO:0004243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epithelioid sarcoma of the proximal type involving the vulva.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal-type epithelioid sarcoma","termid":"MONDO:0004244"},{"relation_name":"is_a","term_name":"vulva sarcoma","termid":"MONDO:0005214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vulvar proximal-type epithelioid sarcoma","secondary_identifiers":["NCIT:C40319","MEDGEN:276995","DOID:7491","UMLS:C1520093"],"termid":"MONDO:0004243","xrefs":{"Monarch":{"xref_id":"0004243"}}}


id: PBO:0067316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 402, pseudogene","termid":"PBO:0067316"}


id: PBO:0000167
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.2.11","termid":"PBO:0000167"}


id: GO:0034592
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the synaptic vesicle membrane.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"synaptic vesicle","termid":"GO:0008021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"synaptic vesicle lumen","termid":"GO:0034592"}


id: PBO:0068968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 212, pseudogene","termid":"PBO:0068968"}


id: PBO:0042208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin J","termid":"PBO:0042208"}


id: PBO:0050813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatitis B virus integration site 7","termid":"PBO:0050813"}


id: MONDO:0006135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare morphologic variant of cervical adenocarcinoma composed of clear and hobnail cells. It is associated with in utero exposure to diethylstilbestrol (DES).","definition_xrefs":["NCIT:C6344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clear cell adenocarcinoma","termid":"MONDO:0005004"},{"relation_name":"is_a","term_name":"cervical adenocarcinoma","termid":"MONDO:0005153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cervical clear cell adenocarcinoma","secondary_identifiers":["DOID:5303","EFO:1000163","MEDGEN:234113","ONCOTREE:CECC","UMLS:C1332912"],"synonyms":[{"name":"cervical clear cell adenocarcinoma","type":"exact"},{"name":"cervical clear cell carcinoma","type":"exact"},{"name":"cervix clear cell adenocarcinoma","type":"exact"},{"name":"cervix clear cell carcinoma","type":"exact"},{"name":"cervix uteri clear cell adenocarcinoma","type":"exact"},{"name":"cervix uteri clear cell carcinoma","type":"exact"},{"name":"clear cell adenocarcinoma of cervix","type":"exact"},{"name":"clear cell adenocarcinoma of cervix uteri","type":"exact"},{"name":"clear cell adenocarcinoma of the cervix","type":"exact"},{"name":"clear cell adenocarcinoma of the cervix uteri","type":"exact"},{"name":"clear cell adenocarcinoma of the uterine cervix","type":"exact"},{"name":"clear cell adenocarcinoma of uterine cervix","type":"exact"},{"name":"clear cell carcinoma of cervix","type":"exact"},{"name":"clear cell carcinoma of cervix uteri","type":"exact"},{"name":"clear cell carcinoma of the cervix","type":"exact"},{"name":"clear cell carcinoma of the cervix uteri","type":"exact"},{"name":"clear cell carcinoma of the uterine cervix","type":"exact"},{"name":"clear cell carcinoma of uterine cervix","type":"exact"},{"name":"uterine cervix clear cell adenocarcinoma","type":"exact"},{"name":"uterine cervix clear cell carcinoma","type":"exact"}],"termid":"MONDO:0006135","xrefs":{"Monarch":{"xref_id":"0006135"}}}


id: MONDO:0014861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autoimmune disease, multisystem, infantile-onset in which the cause of the disease is a mutation in the ZAP70 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disease, multisystem, infantile-onset","termid":"MONDO:0000213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune disease, multisystem, infantile-onset, 2","secondary_identifiers":["OMIM:617006","MEDGEN:934735","UMLS:C4310768"],"synonyms":[{"name":"ADMIO2","type":"exact"},{"name":"ZAP70 autoimmune disease, multisystem, infantile-onset","type":"exact"},{"name":"autoimmune disease, multisystem, infantile-onset caused by mutation in ZAP70","type":"exact"},{"name":"autoimmune disease, multisystem, infantile-onset, 2","type":"exact"},{"name":"autoimmune disease, multisystem, infantile-onset, 2; ADMIO2","type":"exact"},{"name":"autoimmune disease, multisystem, infantile-onset, type 2","type":"exact"}],"termid":"MONDO:0014861","xrefs":{"Monarch":{"xref_id":"0014861"}}}


id: GO:2000385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ectoderm development.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of ectoderm development","termid":"GO:2000383"},{"relation_name":"positively_regulates","term_name":"ectoderm development","termid":"GO:0007398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ectoderm development","termid":"GO:2000385"}


id: SO:0000526
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in germline configuration including more than one V-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_gene_cluster","termid":"SO:0000482"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_cluster","synonyms":[{"name":"V cluster","type":"exact"},{"name":"V-CLUSTER","type":"exact"}],"termid":"SO:0000526"}


id: PBO:0090591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial LYR family protein Lyr2","termid":"PBO:0090591"}


id: PBO:0002221
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Leigh syndrome","termid":"PBO:0002221"}


id: GO:0007531
data:
  {"annotated_genes":["SJAG_05239","SJAG_05153","SJAG_01495","SJAG_01419","SJAG_02079","SJAG_01068","SJAG_03997","SJAG_03097","SJAG_03221","SJAG_00247","SJAG_02724","SJAG_00757","SJAG_01076","SJAG_01677","SJAG_01410","SJAG_01113","SJAG_01601","SJAG_00073","SJAG_02319","SJAG_02226","SJAG_00293","SJAG_00320","SJAG_02556","SJAG_03006","SJAG_00399","SJAG_02828","SJAG_00769","SJAG_02401","SJAG_06638","SJAG_01465","SJAG_02460"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108883,120971,120972],"is_not":false,"summary":null,"term":"GO:0007531"},{"annotations":[118396,93050,95200,118068,120723,89745,100931,118708],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007535"},{"annotations":[100932,118661,112670,99233,89746,102399,91107,90980,108465,110351,116882,107899,120642,112147,97993],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007534"},{"annotations":[94490,98463,100870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007533"},{"annotations":[104777,61316,95891,110352],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071515"},{"annotations":[95165],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071171"}]},"cv_name":"biological_process","definition":"Any process that establishes and transmits the specification of mating type upon an individual. Mating types are the equivalent in microorganisms of the sexes in higher organisms.","definition_xrefs":["PMID:33313646","PMID:8785123","PMID:28916791","PMID:8274857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex determination","termid":"GO:0007530"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00073":null,"SJAG_00247":null,"SJAG_00293":null,"SJAG_00320":null,"SJAG_00399":null,"SJAG_00757":null,"SJAG_00769":null,"SJAG_01068":null,"SJAG_01076":null,"SJAG_01113":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01465":null,"SJAG_01495":null,"SJAG_01601":null,"SJAG_01677":null,"SJAG_02079":null,"SJAG_02226":null,"SJAG_02319":null,"SJAG_02401":null,"SJAG_02460":null,"SJAG_02556":null,"SJAG_02724":null,"SJAG_02828":null,"SJAG_03006":null,"SJAG_03097":null,"SJAG_03221":null,"SJAG_03997":null,"SJAG_05153":null,"SJAG_05239":null,"SJAG_06638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mating type determination","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0007531","terms_by_termid":{"GO:0007531":null,"GO:0007533":null,"GO:0007534":null,"GO:0007535":null,"GO:0071171":null,"GO:0071515":null}}


id: GO:0015835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of peptidoglycans, a class of glycoconjugates found in bacterial cell walls, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"peptidoglycan transport","synonyms":[{"name":"murein transport","type":"exact"}],"termid":"GO:0015835"}


id: GO:0043947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of symbiont enzyme activity. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont catalytic activity (obsolete GO:0043947)","synonyms":[{"name":"activation by host of symbiont enzyme activity","type":"narrow"},{"name":"activation of symbiont enzyme activity","type":"narrow"},{"name":"positive regulation by host of symbiont enzyme activity","type":"exact"},{"name":"up regulation by host of symbiont enzyme activity","type":"exact"},{"name":"up-regulation by host of symbiont enzyme activity","type":"exact"},{"name":"upregulation by host of symbiont enzyme activity","type":"exact"}],"termid":"GO:0043947"}


id: PBO:0084126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hexameric ring ATPase that remodels chromosome axis protein Hop1p; nucleolar component of the pachytene checkpoint, which prevents chromosome segregation when recombination and chromosome synapsis are defective; also represses meiotic interhomolog recombination in rDNA; required for meiotic double-stranded break formation","termid":"PBO:0084126"}


id: GO:0016117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of carotenoids, tetraterpenoid compounds in which two units of 4 isoprenoid residues joined head-to-tail are themselves joined tail-to-tail.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetraterpenoid biosynthetic process","termid":"GO:0016109"},{"relation_name":"is_a","term_name":"carotenoid metabolic process","termid":"GO:0016116"},{"relation_name":"is_a","term_name":"pigment biosynthetic process","termid":"GO:0046148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"carotenoid biosynthetic process","secondary_identifiers":["MetaCyc:CAROTENOID-PWY"],"synonyms":[{"name":"carotenoid anabolism","type":"exact"},{"name":"carotenoid biosynthesis","type":"exact"},{"name":"carotenoid formation","type":"exact"},{"name":"carotenoid synthesis","type":"exact"}],"termid":"GO:0016117"}


id: PBO:0048507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth differentiation factor 7","termid":"PBO:0048507"}


id: PBO:0108935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 14","termid":"PBO:0108935"}


id: GO:0004494
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-methylmalonyl-CoA = succinyl-CoA.","definition_xrefs":["EC:5.4.99.2","RHEA:22888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"methylmalonyl-CoA mutase activity","secondary_identifiers":["KEGG_REACTION:R00833","Reactome:R-HSA-3322971","MetaCyc:METHYLMALONYL-COA-MUT-RXN","UM-BBD_reactionID:r0922","Reactome:R-HSA-71010"],"synonyms":[{"name":"(R)-2-methyl-3-oxopropanoyl-CoA CoA-carbonylmutase activity","type":"related"},{"name":"(R)-methylmalonyl-CoA CoA-carbonylmutase activity","type":"related"},{"name":"(S)-methylmalonyl-CoA mutase activity","type":"related"},{"name":"methylmalonyl coenzyme A carbonylmutase activity","type":"related"},{"name":"methylmalonyl coenzyme A mutase activity","type":"related"},{"name":"methylmalonyl-CoA CoA-carbonyl mutase activity","type":"related"}],"termid":"GO:0004494"}


id: MONDO:0003716
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A papillary transitional cell carcinoma that arises from the renal pelvis.","definition_xrefs":["NCIT:P378","NCIT:C6148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal pelvis papillary tumor","termid":"MONDO:0003717"},{"relation_name":"is_a","term_name":"renal pelvis urothelial carcinoma","termid":"MONDO:0005221"},{"relation_name":"is_a","term_name":"papillary transitional cell carcinoma","termid":"MONDO:0006350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"renal pelvis papillary urothelial carcinoma","secondary_identifiers":["UMLS:C1377909","MEDGEN:237178","DOID:5973"],"synonyms":[{"name":"kidney pelvis papillary carcinoma","type":"exact"},{"name":"papillary carcinoma of kidney pelvis","type":"exact"},{"name":"papillary carcinoma of renal pelvis","type":"exact"},{"name":"papillary carcinoma of the kidney pelvis","type":"exact"},{"name":"papillary carcinoma of the renal pelvis","type":"exact"},{"name":"renal pelvis papillary carcinoma","type":"exact"},{"name":"renal pelvis papillary urothelial carcinoma","type":"exact"}],"termid":"MONDO:0003716","xrefs":{"Monarch":{"xref_id":"0003716"}}}


id: PBO:0079583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 C pseudogene 4","termid":"PBO:0079583"}


id: PBO:0087739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Snt2C complex; physically associates with Snt2p and Rpd3p; along with Snt2p, recruits Rpd3p to a small number of promoters; also colocalizes with Snt2p, independently of Rpd3p, to promoters of stress response genes in response to oxidative stress; contains ATP/GTP-binding site motif A; null mutant exhibits increased cellular volume, large drooping buds with elongated necks; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0087739"}


id: SO:0000818
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that rescues.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"wild_type","termid":"SO:0000817"},{"relation_name":"is_a","term_name":"rescue_gene","termid":"SO:0000816"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wild_type_rescue_gene","synonyms":[{"name":"wild type rescue gene","type":"exact"}],"termid":"SO:0000818"}


id: GO:0044646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of complement activation in the bitten/stung organism.","definition_xrefs":["GOC:jl","GOC:fj","PMID:20837040"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in modulation of complement activation in another organism (obsolete GO:0044646)","synonyms":[{"name":"envenomation resulting in modulation of complement activation in other organism","type":"exact"},{"name":"envenomation resulting in regulation of complement activation in other organism","type":"exact"}],"termid":"GO:0044646"}


id: PBO:0081428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 282","termid":"PBO:0081428"}


id: GO:0003917
data:
  {"annotated_genes":["SJAG_05193","SJAG_04816"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72167,74492],"is_not":false,"summary":null,"term":"GO:0003917"}]},"cv_name":"molecular_function","definition":"Catalysis of a DNA topological transformation by transiently cleaving one DNA strand at a time to allow passage of another strand; changes the linking number by +1 per catalytic cycle.","definition_xrefs":["PMID:8811192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA topoisomerase activity","termid":"GO:0003916"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04816":null,"SJAG_05193":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140097","GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"DNA topoisomerase type I (single strand cut, ATP-independent) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:5.99.1.2-RXN","Reactome:R-HSA-9914922","EC:5.6.2.1"],"synonyms":[{"name":"DNA topoisomerase I activity","type":"narrow"},{"name":"deoxyribonucleate topoisomerase","type":"broad"},{"name":"nicking-closing enzyme activity","type":"related"},{"name":"omega-protein activity","type":"related"},{"name":"relaxing enzyme activity","type":"related"},{"name":"swivelase activity","type":"related"},{"name":"topoisomerase","type":"broad"},{"name":"type I DNA topoisomerase activity","type":"exact"},{"name":"type I topoisomerase activity","type":"exact"},{"name":"untwisting enzyme activity","type":"related"}],"termid":"GO:0003917","terms_by_termid":{"GO:0003917":null}}


id: MONDO:0022863
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corneal crystals myopathy neuropathy","termid":"MONDO:0022863","xrefs":{"Monarch":{"xref_id":"0022863"}}}


id: MONDO:0003906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A yolk sac tumor that arises from the ovary and is characterized by the presence of extensive differentiation into hepatic tissue.","definition_xrefs":["NCIT:C39989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian yolk sac tumor","termid":"MONDO:0006344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian yolk sac tumor, hepatoid pattern","secondary_identifiers":["MEDGEN:276676","UMLS:C1518748","DOID:6512"],"synonyms":[{"name":"hepatoid pattern ovarian yolk sac tumor","type":"related"},{"name":"hepatoid pattern ovarian yolk sac tumour","type":"related"},{"name":"ovarian yolk Sac tumor, hepatoid pattern","type":"exact"}],"termid":"MONDO:0003906","xrefs":{"Monarch":{"xref_id":"0003906"}}}


id: PBO:0067923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 225","termid":"PBO:0067923"}


id: PBO:0051776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQCA1 antisense RNA 1","termid":"PBO:0051776"}


id: PBO:0053744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 971","termid":"PBO:0053744"}


id: MOD:00462
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to L-kynurenine.","definition_xrefs":["Unimod:351#W","PubMed:9252331","DeltaMass:357","OMSSA:66","PubMed:11029593"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-kynurenine","synonyms":[{"name":"(2S)-2-amino-4-(2-aminophenyl)-4-oxo-butanoic acid","type":"exact"},{"name":"Trp->Kynurenin","type":"related"},{"name":"kynureninw","type":"exact"},{"name":"tryptophan oxidation to kynurenin","type":"related"}],"termid":"MOD:00462"}


id: MONDO:0019580
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Papular mucinosis of infancy is a rare pediatric non progressive form of localized lichen myxedematosus characterized by the development of firm opalescent mucinous papules on the upper arms and the trunk.","definition_xrefs":["Orphanet:90395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localized lichen myxedematosus","termid":"MONDO:0019446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"papular mucinosis of infancy","secondary_identifiers":["MEDGEN:909529","GARD:19139","UMLS:C4273966","SCTID:717259002"],"synonyms":[{"name":"cutaneous mucinosis of infancy","type":"exact"}],"termid":"MONDO:0019580","xrefs":{"Monarch":{"xref_id":"0019580"}}}


id: MONDO:0006267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma with cavernous vascular spaces arising from the liver. It is the most frequent benign tumor of the liver and usually affects young females.","definition_xrefs":["NCIT:C96839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver hemangioma","termid":"MONDO:0002404"},{"relation_name":"is_a","term_name":"cavernous hemangioma","termid":"MONDO:0003155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005570","MONDO:0002515"],"is_obsolete":false,"name":"liver cavernous hemangioma","secondary_identifiers":["UMLS:C3282904","MEDGEN:482990"],"synonyms":[{"name":"cavernous hemangioma of liver","type":"exact"},{"name":"liver cavernous hemangioma","type":"exact"}],"termid":"MONDO:0006267","xrefs":{"Monarch":{"xref_id":"0006267"}}}


id: PATO:0001317
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A temperature which is increased by a high degree.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased temperature","termid":"PATO:0001305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"severe increased temperature","termid":"PATO:0001317"}


id: PBO:0003936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein Rec15","termid":"PBO:0003936"}


id: GO:1905505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of motile cilium assembly.","definition_xrefs":["PMID:25294941","GOC:cilia","GOC:krc","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cilium assembly","termid":"GO:0045724"},{"relation_name":"is_a","term_name":"regulation of motile cilium assembly","termid":"GO:1905503"},{"relation_name":"positively_regulates","term_name":"motile cilium assembly","termid":"GO:0044458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of motile cilium assembly","synonyms":[{"name":"activation of motile primary cilia assembly","type":"narrow"},{"name":"activation of motile primary cilia formation","type":"narrow"},{"name":"activation of motile primary cilium assembly","type":"narrow"},{"name":"activation of motile primary cilium formation","type":"narrow"},{"name":"activation of nodal cilium assembly","type":"related"},{"name":"activation of nodal cilium formation","type":"related"},{"name":"positive regulation of motile primary cilia assembly","type":"related"},{"name":"positive regulation of motile primary cilia formation","type":"related"},{"name":"positive regulation of motile primary cilium assembly","type":"related"},{"name":"positive regulation of motile primary cilium formation","type":"related"},{"name":"positive regulation of nodal cilium assembly","type":"related"},{"name":"positive regulation of nodal cilium formation","type":"related"},{"name":"up regulation of motile primary cilia assembly","type":"related"},{"name":"up regulation of motile primary cilia formation","type":"related"},{"name":"up regulation of motile primary cilium assembly","type":"related"},{"name":"up regulation of motile primary cilium formation","type":"related"},{"name":"up regulation of nodal cilium assembly","type":"related"},{"name":"up regulation of nodal cilium formation","type":"related"},{"name":"up-regulation of motile primary cilia assembly","type":"related"},{"name":"up-regulation of motile primary cilia formation","type":"related"},{"name":"up-regulation of motile primary cilium assembly","type":"related"},{"name":"up-regulation of motile primary cilium formation","type":"related"},{"name":"up-regulation of nodal cilium assembly","type":"related"},{"name":"up-regulation of nodal cilium formation","type":"related"},{"name":"upregulation of motile primary cilia assembly","type":"related"},{"name":"upregulation of motile primary cilia formation","type":"related"},{"name":"upregulation of motile primary cilium assembly","type":"related"},{"name":"upregulation of motile primary cilium formation","type":"related"},{"name":"upregulation of nodal cilium assembly","type":"related"},{"name":"upregulation of nodal cilium formation","type":"related"}],"termid":"GO:1905505"}


id: MONDO:0004508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the periapical tissue. It includes general, unspecified, or acute nonsuppurative inflammation. Chronic nonsuppurative inflammation is periapical granuloma. Suppurative inflammation is periapical abscess.","definition_xrefs":["MESH:D010485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"periodontitis","termid":"MONDO:0005076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periapical periodontitis","secondary_identifiers":["UMLS:C0031030","DOID:823","icd11.foundation:1395124674","MEDGEN:45396","SCTID:39273001","EFO:1001391"],"synonyms":[{"name":"apical periodontitis","type":"exact"}],"termid":"MONDO:0004508","xrefs":{"Monarch":{"xref_id":"0004508"}}}


id: PBO:0064157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group IIA","termid":"PBO:0064157"}


id: PATO:0002251
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A degree of pigmentation quality that is relative low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"pigmented","termid":"PATO:0002248"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased pigmentation","synonyms":[{"name":"hypopigmented","type":"exact"}],"termid":"PATO:0002251"}


id: PBO:0056951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 17","termid":"PBO:0056951"}


id: GO:1901089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any acetate ester metabolic process that is involved in fermentation.","definition_xrefs":["GOC:TermGenie","GOC:sgd_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate ester metabolic process","termid":"GO:1900619"},{"relation_name":"part_of","term_name":"fermentation","termid":"GO:0006113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"acetate ester metabolic process involved in fermentation","synonyms":[{"name":"acetate ester metabolic process during fermentation","type":"exact"}],"termid":"GO:1901089"}


id: PBO:0068212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 519","termid":"PBO:0068212"}


id: PBO:0072464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 28","termid":"PBO:0072464"}


id: MONDO:0014152
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the PRDM16 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"left ventricular noncompaction","termid":"MONDO:0018901"},{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"left ventricular noncompaction 8","secondary_identifiers":["UMLS:C3809288","GARD:15952","MEDGEN:815618","OMIM:615373","DOID:0081157"],"synonyms":[{"name":"LVNC8","type":"related"},{"name":"PRDM16 familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1Ll","type":"related"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in PRDM16","type":"exact"},{"name":"left ventricular noncompaction 8","type":"exact"},{"name":"left ventricular noncompaction type 8","type":"exact"}],"termid":"MONDO:0014152","xrefs":{"Monarch":{"xref_id":"0014152"}}}


id: PBO:0030066
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_phosphoglycerate_mutase_activity","termid":"PBO:0030066"}


id: GO:0007636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sudden, usually upward, movement off the ground or other surface through sudden muscular effort in the legs, following exposure to a chemical substance.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"jump response","termid":"GO:0007630"},{"relation_name":"is_a","term_name":"chemosensory behavior","termid":"GO:0007635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemosensory jump behavior","synonyms":[{"name":"chemosensory jump behaviour","type":"exact"},{"name":"jump response to chemical stimulus","type":"exact"}],"termid":"GO:0007636"}


id: GO:0005151
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Type II interleukin-1 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-1 receptor binding","termid":"GO:0005149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"interleukin-1, type II receptor binding","synonyms":[{"name":"IL-1 type II","type":"narrow"},{"name":"interleukin-1, type II receptor ligand","type":"narrow"}],"termid":"GO:0005151"}


id: PBO:0054034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1365","termid":"PBO:0054034"}


id: PR:O74738
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- set10 gene.","definition_xrefs":["UniProtKB:O74738","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal lysine N-methyltransferase set10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.13c","synonyms":[{"name":"SET domain-containing protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-set10","type":"exact"}],"termid":"PR:O74738"}


id: PBO:0050913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced protein with tetratricopeptide repeats 5","termid":"PBO:0050913"}


id: PBO:0074301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLX1A-SULT1A3 readthrough (NMD candidate)","termid":"PBO:0074301"}


id: GO:1902761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chondrocyte development.","definition_xrefs":["GOC:mr","GOC:TermGenie","PMID:16575901","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"positive regulation of chondrocyte differentiation","termid":"GO:0032332"},{"relation_name":"is_a","term_name":"regulation of chondrocyte development","termid":"GO:0061181"},{"relation_name":"positively_regulates","term_name":"chondrocyte development","termid":"GO:0002063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chondrocyte development","synonyms":[{"name":"activation of chondrocyte development","type":"narrow"},{"name":"up regulation of chondrocyte development","type":"exact"},{"name":"up-regulation of chondrocyte development","type":"exact"},{"name":"upregulation of chondrocyte development","type":"exact"}],"termid":"GO:1902761"}


id: GO:0043441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of acetoacetic acid, a beta-keto acid of the keto acid group, empirical formula is C4H6O3 or CH3COCH2COOH.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetoacetic acid metabolic process","termid":"GO:0043438"},{"relation_name":"is_a","term_name":"ketone body biosynthetic process","termid":"GO:0046951"},{"relation_name":"is_a","term_name":"short-chain fatty acid biosynthetic process","termid":"GO:0051790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006091","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"acetoacetic acid biosynthetic process","synonyms":[{"name":"acetoacetic acid anabolism","type":"exact"},{"name":"acetoacetic acid biosynthesis","type":"exact"},{"name":"acetoacetic acid formation","type":"exact"},{"name":"acetoacetic acid synthesis","type":"exact"}],"termid":"GO:0043441"}


id: GO:0150107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to cell-cell junction.","definition_xrefs":["GOC:bc","PMID:26706435","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell-cell junction","termid":"GO:0150106"},{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"positively_regulates","term_name":"protein localization to cell-cell junction","termid":"GO:0150105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to cell-cell junction","termid":"GO:0150107"}


id: MONDO:1010950
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial adenomatous polyposis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial adenomatous polyposis, non-human animal","termid":"MONDO:1010215"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial adenomatous polyposis, dog","secondary_identifiers":["OMIA:001916-9615"],"termid":"MONDO:1010950","xrefs":{"Monarch":{"xref_id":"1010950"}}}


id: PBO:0055033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2448","termid":"PBO:0055033"}


id: MONDO:0020773
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Discharge of cerebrospinal fluid through the nose. Common etiologies include trauma, neoplasms, and prior surgery, although the condition may occur spontaneously. (Otolaryngol Head Neck Surg 1997 Apr;116(4):442-9)","definition_xrefs":["MESH:D002559"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebrospinal fluid leak","termid":"MONDO:0043327"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebrospinal fluid rhinorrhea","secondary_identifiers":["NCIT:C84627","GTR:AN1355639","UMLS:C0007815","ICD9:349.81","GTR:AN1353832","MEDGEN:3331","SCTID:85638002","HP:0030998"],"synonyms":[{"name":"CSF - Cerebrospinal rhinorrhea","type":"related"},{"name":"CSF Rhinorrhea","type":"related"},{"name":"CSF Rhinorrheas","type":"related"},{"name":"CSF rhinorrhoea","type":"related"},{"name":"Cerebrospinal Fluid Rhinorrhea","type":"related"},{"name":"Cerebrospinal Fluid Rhinorrhea, Spontaneous","type":"related"},{"name":"Cerebrospinal Fluid Rhinorrhea, Traumatic","type":"related"},{"name":"Cerebrospinal Fluid Rhinorrhea, post Traumatic","type":"related"},{"name":"Cerebrospinal Fluid Rhinorrhea, post-Traumatic","type":"related"},{"name":"Cerebrospinal Fluid Rhinorrheas","type":"related"},{"name":"Cerebrospinal Rhinorrhea","type":"related"},{"name":"Cerebrospinal Rhinorrheas","type":"related"},{"name":"Cerebrospinal fluid rhinorrhea","type":"related"},{"name":"Cerebrospinal fluid rhinorrhoea","type":"related"},{"name":"Cerebrospinal rhinorrhea","type":"related"},{"name":"Rhinorrhea, CSF","type":"related"},{"name":"Rhinorrhea, Cerebrospinal","type":"related"},{"name":"Rhinorrhea, Cerebrospinal Fluid","type":"related"},{"name":"Rhinorrhea, Cerebrospinal Fluid, Spontaneous","type":"related"},{"name":"Rhinorrhea, Cerebrospinal Fluid, Traumatic","type":"related"},{"name":"Rhinorrhea, Cerebrospinal Fluid, post-Traumatic","type":"related"},{"name":"Rhinorrhea, Spontaneous Cerebrospinal Fluid","type":"related"},{"name":"Rhinorrhea, Traumatic Cerebrospinal Fluid","type":"related"},{"name":"Rhinorrhea, post-Traumatic, Cerebrospinal Fluid","type":"related"},{"name":"Rhinorrheas, CSF","type":"related"},{"name":"Rhinorrheas, Cerebrospinal","type":"related"},{"name":"Rhinorrheas, Cerebrospinal Fluid","type":"related"},{"name":"Spontaneous Cerebrospinal Fluid Rhinorrhea","type":"related"},{"name":"Spontaneous Rhinorrhea, Cerebrospinal Fluid","type":"related"},{"name":"Traumatic Cerebrospinal Fluid Rhinorrhea","type":"related"},{"name":"Traumatic Rhinorrhea, Cerebrospinal Fluid","type":"related"},{"name":"cerebrospinal fluid rhinorrhea","type":"exact"},{"name":"cerebrospinal rhinorrhea","type":"related"},{"name":"csf - cerebrospinal rhinorrhea","type":"related"},{"name":"post Traumatic Cerebrospinal Fluid Rhinorrhea","type":"related"},{"name":"post Traumatic Rhinorrhea, Cerebrospinal Fluid","type":"related"},{"name":"post-Traumatic Cerebrospinal Fluid Rhinorrhea","type":"related"},{"name":"post-Traumatic Rhinorrhea, Cerebrospinal Fluid","type":"related"}],"termid":"MONDO:0020773","xrefs":{"Monarch":{"xref_id":"0020773"}}}


id: MONDO:0010007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microbrachycephaly-ptosis-cleft lip syndrome is characterized by the association of intellectual deficit, microbrachycephaly, hypotelorism, palpebral ptosis, a thin/long face, cleft lip, and anomalies of the lumbar vertebra, sacrum and pelvis. It has been described in two Brazilian sisters. Transmission appears to be autosomal recessive.","definition_xrefs":["Orphanet:2511"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microbrachycephaly-ptosis-cleft lip syndrome","secondary_identifiers":["GARD:3596","MEDGEN:162914","OMIM:268850","UMLS:C0796142"],"synonyms":[{"name":"Richieri Costa-Guion Almeida-Ramos syndrome","type":"exact"},{"name":"Richieri-COSTA/Guion-Almeida syndrome","type":"related"},{"name":"microbrachycephaly ptosis cleft lip","type":"related"},{"name":"sao Paulo MCA/Mr syndrome","type":"related"},{"name":"short stature, intellectual disability, eye anomalies, and cleft Lip/palate","type":"related"},{"name":"short stature, mental retardation, eye anomalies, and cleft Lip/palate","type":"related"}],"termid":"MONDO:0010007","xrefs":{"Monarch":{"xref_id":"0010007"}}}


id: PBO:0069569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 841, pseudogene","termid":"PBO:0069569"}


id: PBO:0048572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyl hydrolase","termid":"PBO:0048572"}


id: PATO:0001333
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a process which ends later than the natural end time.","definition_xrefs":["PATOC:melissa"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased process quality","termid":"PATO:0002304"},{"relation_name":"is_a","term_name":"offset quality","termid":"PATO:0002324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"temporally extended","termid":"PATO:0001333"}


id: MOD:00420
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to 2-pyrrolidone-5-carboxylic acid.","definition_xrefs":["Unimod:27#E","OMSSA:109","PubMed:10214721","PubMed:1836357","PubMed:8382902","PubMed:3473473","RESID:AA0031#GLU","DeltaMass:16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"},{"relation_name":"is_a","term_name":"2-pyrrolidone-5-carboxylic acid","termid":"MOD:01048"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-pyrrolidone-5-carboxylic acid (Glu)","synonyms":[{"name":"(2S)-5-oxo-2-pyrrolidinecarboxylic acid","type":"exact"},{"name":"2-oxopyrrolidine-5-carboxylic acid","type":"exact"},{"name":"2-pyrrolidone-5-carboxylic acid","type":"exact"},{"name":"5-oxoproline","type":"exact"},{"name":"5-oxopyrrolidine-2-carboxylic acid","type":"exact"},{"name":"5-pyrrolidone-2-carboxylic acid","type":"exact"},{"name":"Glu->pyro-Glu","type":"related"},{"name":"MOD_RES Pyrrolidone carboxylic acid (Glu)","type":"exact"},{"name":"PCA","type":"exact"},{"name":"PyrGlu(Glu)","type":"exact"},{"name":"Pyro-glu from E","type":"related"},{"name":"Pyroglutamic Acid formed from Glutamic Acid","type":"exact"},{"name":"ntermpeppyroe","type":"exact"},{"name":"pyroglutamic acid","type":"exact"}],"termid":"MOD:00420"}


id: PBO:0108972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary microtubule inner protein 3","termid":"PBO:0108972"}


id: FYPO:0006083
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A sporulation phenotype in which asci that contain four spores form following conjugation and subsequent sporulation, but sporulation is not entirely normal.","definition_xrefs":["PomBase:mah","PMID:28011631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation","termid":"FYPO:0000121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000121"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0000121","FYPO:0005447"],"is_obsolete":false,"name":"abnormal sporulation resulting in formation of ascus with four spores","synonyms":[{"name":"ascospore formation resulting in formation of asci with four spores","type":"exact"},{"name":"normal spore number","type":"exact"},{"name":"sporulation resulting in formation of asci with four spores","type":"exact"}],"termid":"FYPO:0006083"}


id: PBO:0064004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 38","termid":"PBO:0064004"}


id: GO:0015947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving methane, a colorless, odorless, flammable gas with the formula CH4. It is the simplest of the alkanes.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkane metabolic process","termid":"GO:0043446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"methane metabolic process","synonyms":[{"name":"methane metabolism","type":"exact"}],"termid":"GO:0015947"}


id: PBO:0081878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 823","termid":"PBO:0081878"}


id: GO:0009233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any of the menaquinones, quinone-derived compounds synthesized by intestinal bacteria. Structurally, menaquinones consist of a methylated naphthoquinone ring structure and side chains composed of a variable number of unsaturated isoprenoid residues. Menaquinones have vitamin K activity and are known as vitamin K2.","definition_xrefs":["PMID:6127606","GOC:jl","PMID:8642453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"menaquinone metabolic process","synonyms":[{"name":"menaquinone metabolism","type":"exact"},{"name":"menatetrenone metabolic process","type":"exact"},{"name":"menatetrenone metabolism","type":"exact"},{"name":"multiprenylmenaquinone metabolic process","type":"exact"},{"name":"multiprenylmenaquinone metabolism","type":"exact"},{"name":"vitamin K2 metabolic process","type":"exact"},{"name":"vitamin K2 metabolism","type":"exact"}],"termid":"GO:0009233"}


id: PBO:0030079
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glutamate_import_during_nitrogen_starvation","termid":"PBO:0030079"}


id: GO:0005946
data:
  {"annotated_genes":["SJAG_00129","SJAG_00182","SJAG_01646","SJAG_01531","SJAG_04859","SJAG_01427","SJAG_01862"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75686,76212,77832,80592,81071,81642,113361],"is_not":false,"summary":null,"term":"GO:0005946"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses alpha,alpha-trehalose-phosphate synthase (UDP-forming) and trehalose-phosphatase activities, and thus catalyzes two reactions in trehalose biosynthesis. In the complex identified in Saccharomyces, Tps1p has alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity, Tps2p has trehalose 6-phosphate phosphatase activity; Tps3p is a regulatory subunit, and an additional subunit, Tsl1p, may be present.","definition_xrefs":["PMID:9837904"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00182":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01646":null,"SJAG_01862":null,"SJAG_04859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"alpha,alpha-trehalose-phosphate synthase complex (UDP-forming)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"UDP-glucose-glucosephosphate glucosyltransferase complex","type":"exact"},{"name":"trehalose-6-phosphate synthase complex","type":"exact"},{"name":"trehalose-6-phosphate synthase/phosphatase","type":"exact"}],"termid":"GO:0005946","terms_by_termid":{"GO:0005946":null}}


id: MONDO:0017809
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Kufor-Rakeb syndrome","termid":"MONDO:0011706"},{"relation_name":"is_a","term_name":"juvenile neuronal ceroid lipofuscinosis","termid":"MONDO:0019262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559","MONDO:0005066","MONDO:0002525","MONDO:0002561"],"is_obsolete":false,"name":"parkinsonism due to ATP13A2 deficiency","secondary_identifiers":["Orphanet:314632","SCTID:789657008","GARD:17427"],"synonyms":[{"name":"CLN12 disease","type":"exact"}],"termid":"MONDO:0017809","xrefs":{"Monarch":{"xref_id":"0017809"}}}


id: GO:0072256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a metanephric glomerular mesangial cell.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular mesangial cell fate commitment","termid":"GO:0072152"},{"relation_name":"part_of","term_name":"metanephric glomerular mesangial cell differentiation","termid":"GO:0072254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerular mesangial cell fate commitment","termid":"GO:0072256"}


id: MONDO:0007428
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Deafness-craniofacial syndrome is characterized by the association of congenital hearing loss and facial dysmorphism (facial asymmetry, a broad nasal root and small nasal alae). It has been described in two members (father and daughter) of one Jewish family. Temporal alopecia was also noted. Transmission appeared to be autosomal dominant.","definition_xrefs":["Orphanet:3241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness-craniofacial syndrome","secondary_identifiers":["MEDGEN:342201","SCTID:716245003","OMIM:125230","MESH:C565118","GARD:1686","UMLS:C1852278"],"synonyms":[{"name":"deafness craniofacial syndrome","type":"related"},{"name":"deafness-craniofacial syndrome","type":"exact"}],"termid":"MONDO:0007428","xrefs":{"Monarch":{"xref_id":"0007428"}}}


id: GO:0047994
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-hydroxy-3-methylglutaryl-CoA + H2O = 3-hydroxy-3-methylglutarate + CoA + H+.","definition_xrefs":["EC:3.1.2.5","RHEA:16305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA hydrolase activity","termid":"GO:0016289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hydroxymethylglutaryl-CoA hydrolase activity","secondary_identifiers":["MetaCyc:HYDROXYMETHYLGLUTARYL-COA-HYDROLASE-RXN","KEGG_REACTION:R02083"],"synonyms":[{"name":"(S)-3-hydroxy-3-methylglutaryl-CoA hydrolase activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl-CoA hydrolase activity","type":"related"},{"name":"beta-hydroxy-beta-methylglutaryl coenzyme A deacylase activity","type":"related"},{"name":"beta-hydroxy-beta-methylglutaryl coenzyme A hydrolase activity","type":"related"},{"name":"hydroxymethylglutaryl coenzyme A deacylase activity","type":"related"},{"name":"hydroxymethylglutaryl coenzyme A hydrolase activity","type":"related"}],"termid":"GO:0047994"}


id: PBO:0054003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1331","termid":"PBO:0054003"}


id: PBO:0055590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3026","termid":"PBO:0055590"}


id: PR:Q8X1T0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A desumoylating isopeptidase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01966","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DeSI-like protein sdu1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPYUG7.06","secondary_identifiers":["UniProtKB:Q8X1T0"],"synonyms":[{"name":"Spom972h-DESI2","type":"exact"},{"name":"meiotically up-regulated gene 67 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q8X1T0"}


id: GO:1904475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of small GTPase binding.","definition_xrefs":["GOC:TermGenie","PMID:15798216","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of small GTPase binding (obsolete GO:1904475)","synonyms":[{"name":"regulation of Ras GTPase binding","type":"narrow"}],"termid":"GO:1904475"}


id: GO:0000380
data:
  {"annotated_genes":["SJAG_03214","SJAG_04782","SJAG_05276","SJAG_04949","SJAG_05211","SJAG_01169","SJAG_03890","SJAG_02905","SJAG_05224","SJAG_04863"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81476,93917,97766,98261,110078],"is_not":false,"summary":null,"term":"GO:0000380"},{"annotations":[107315,94704,113384,66172,114924],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0000381"}]},"cv_name":"biological_process","definition":"The process of generating multiple mRNA molecules from a given set of exons by differential use of exons from the primary transcript(s) to form multiple mature mRNAs that vary in their exon composition.","definition_xrefs":["GOC:krc","PMID:12110900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA splicing, via spliceosome","termid":"GO:0000398"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01169":null,"SJAG_02905":null,"SJAG_03214":null,"SJAG_03890":null,"SJAG_04782":null,"SJAG_04863":null,"SJAG_04949":null,"SJAG_05211":null,"SJAG_05224":null,"SJAG_05276":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"alternative mRNA splicing, via spliceosome","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"alternative nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"splice site selection","type":"broad"}],"termid":"GO:0000380","terms_by_termid":{"GO:0000380":null,"GO:0000381":null}}


id: GO:0009642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light intensity stimulus.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to light stimulus","termid":"GO:0009416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to light intensity","termid":"GO:0009642"}


id: PBO:0076434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 11 like 10","termid":"PBO:0076434"}


id: GO:0034173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 11 signaling pathway.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 11 signaling pathway","termid":"GO:0034171"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 11 signaling pathway","termid":"GO:0034170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 11 signaling pathway","synonyms":[{"name":"positive regulation of TLR11 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 11 signalling pathway","type":"exact"}],"termid":"GO:0034173"}


id: GO:0016080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which synaptic vesicles are directed to specific destination membranes, mediated by molecules at the vesicle membrane and target membrane surfaces.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle targeting","termid":"GO:0006903"},{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"},{"relation_name":"part_of","term_name":"synaptic vesicle exocytosis","termid":"GO:0016079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"synaptic vesicle targeting","termid":"GO:0016080"}


id: PR:O13960
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ecm33 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall protein ecm33 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1705.03c","synonyms":[{"name":"Spom972h-ecm33","type":"exact"}],"termid":"PR:O13960"}


id: PBO:0081334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF133 antisense RNA 1","termid":"PBO:0081334"}


id: GO:0051840
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of cytolysis by that organism of cells in its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of cytolysis of symbiont cells (obsolete GO:0051840)","synonyms":[{"name":"down regulation by host of cytolysis of symbiont cells","type":"exact"},{"name":"down-regulation by host of cytolysis of symbiont cells","type":"exact"},{"name":"downregulation by host of cytolysis of symbiont cells","type":"exact"},{"name":"inhibition by host of cytolysis of symbiont cells","type":"narrow"}],"termid":"GO:0051840"}


id: GO:1904756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of gut granule assembly.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:17535251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle assembly","termid":"GO:1902116"},{"relation_name":"is_a","term_name":"regulation of gut granule assembly","termid":"GO:1904755"},{"relation_name":"negatively_regulates","term_name":"gut granule assembly","termid":"GO:1902900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gut granule assembly","synonyms":[{"name":"down regulation of gut granule assembly","type":"exact"},{"name":"down regulation of gut granule biogenesis","type":"exact"},{"name":"down regulation of gut granule formation","type":"exact"},{"name":"down-regulation of gut granule assembly","type":"exact"},{"name":"down-regulation of gut granule biogenesis","type":"exact"},{"name":"down-regulation of gut granule formation","type":"exact"},{"name":"downregulation of gut granule assembly","type":"exact"},{"name":"downregulation of gut granule biogenesis","type":"exact"},{"name":"downregulation of gut granule formation","type":"exact"},{"name":"inhibition of gut granule assembly","type":"narrow"},{"name":"inhibition of gut granule biogenesis","type":"narrow"},{"name":"inhibition of gut granule formation","type":"narrow"},{"name":"negative regulation of gut granule biogenesis","type":"exact"},{"name":"negative regulation of gut granule formation","type":"exact"}],"termid":"GO:1904756"}


id: GO:1902590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An organelle organization which involves another organism.","definition_xrefs":["GO_REF:0000089","GOC:jl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism organelle organization (obsolete GO:1902590)","synonyms":[{"name":"multi organism organelle organization","type":"exact"}],"termid":"GO:1902590"}


id: GO:0071542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a neuroblast acquires the specialized structural and functional features of a dopaminergic neuron, a neuron that secretes dopamine.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron differentiation","termid":"GO:0030182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dopaminergic neuron differentiation","termid":"GO:0071542"}


id: PBO:0067553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 704, pseudogene","termid":"PBO:0067553"}


id: GO:0048466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the androecium over time, from its formation to the mature structure.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral whorl development","termid":"GO:0048438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"androecium development","termid":"GO:0048466"}


id: MONDO:0700074
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any multiple acyl-CoA dehydrogenase deficiency in which the cause of the disease is a mutation in the ETFB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple acyl-CoA dehydrogenase deficiency","termid":"MONDO:0009282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069","MONDO:0002525","MONDO:0005267"],"is_obsolete":false,"name":"glutaric acidemia IIb","secondary_identifiers":["MEDGEN:479785","UMLS:C3278155"],"synonyms":[{"name":"ETFB deficiency","type":"exact"},{"name":"GA2B","type":"exact"},{"name":"glutaric acidemia 2B","type":"exact"},{"name":"multiple acyl-CoA dehydrogenase deficiency caused by mutation in ETFB","type":"exact"}],"termid":"MONDO:0700074","xrefs":{"Monarch":{"xref_id":"0700074"}}}


id: PBO:0113315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in regulation of diacylglycerol lipids levels; deletion causes sensitivity to unfolded protein response-inducing agents","termid":"PBO:0113315"}


id: MONDO:0010157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tryptophanuria with dwarfism","secondary_identifiers":["OMIM:276100","MESH:C562658","ICD9:259.4","SCTID:12045002","MEDGEN:78680","UMLS:C0268473"],"synonyms":[{"name":"Tryptophanuria with dwarfism","type":"exact"}],"termid":"MONDO:0010157","xrefs":{"Monarch":{"xref_id":"0010157"}}}


id: MONDO:0015678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Meyer dysplasia of the femoral head is a mild localized form of skeletal dysplasia characterized by delayed, irregular ossification of femoral capital epiphysis.","definition_xrefs":["Orphanet:168621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysplasia of head of femur, Meyer type","secondary_identifiers":["UMLS:C4274970","SCTID:715861004","icd11.foundation:381445908","GARD:20098","MEDGEN:909364"],"termid":"MONDO:0015678","xrefs":{"Monarch":{"xref_id":"0015678"}}}


id: GO:0080124
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pheophytin + H2O = phytol + pheophorbide.","definition_xrefs":["PMID:19304936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"pheophytinase activity","synonyms":[{"name":"pheophytin pheophorbide hydrolase activity","type":"exact"}],"termid":"GO:0080124"}


id: PBO:0012545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER heat shock protein Lsh1 (predicted)","termid":"PBO:0012545"}


id: MONDO:1011776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inborn error of hepatic metabolism, non-human animal","secondary_identifiers":["OMIA:000561"],"termid":"MONDO:1011776","xrefs":{"Monarch":{"xref_id":"1011776"}}}


id: PBO:0091838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall glucan 1,6-beta-glucosidase Exg1","termid":"PBO:0091838"}


id: PBO:0090316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Esc1","termid":"PBO:0090316"}


id: GO:0046819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which proteins mediate their own secretion across the outer membrane through a beta-barrel pore structure formed by the C-terminal domain of the protein precursor. Following passage across the outer membrane, the mature protein is released from the pore by an autocatalytic activity. Proteins secreted by the Type V system are first translocated across the plasma membrane by the Sec pathway.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"is_a","term_name":"protein transport across the cell outer membrane","termid":"GO:0098776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"protein secretion by the type V secretion system","synonyms":[{"name":"autotransporter system","type":"exact"},{"name":"protein secretion by the autotransporter system","type":"exact"},{"name":"protein secretion by the type V protein secretion system","type":"exact"},{"name":"type V protein secretion system","type":"exact"}],"termid":"GO:0046819"}


id: PBO:0074121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 30 member 6","termid":"PBO:0074121"}


id: GO:0036246
data:
  {"annotated_genes":["SJAG_05213","SJAG_03497","SJAG_01344"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97889,98864,120073],"is_not":false,"summary":null,"term":"GO:0036246"}]},"cv_name":"biological_process","definition":"The directed movement of phytochelatin 2 (PC2) into the vacuole. Phytochelatin 2 is a glutathione-related peptide composed of (gamma-Glu-Cys)n-Gly where n=2, and where the Glu and Cys residues are linked through a gamma-carboxylamide bond.","definition_xrefs":["PMID:19001374","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide transmembrane transport","termid":"GO:0035672"},{"relation_name":"is_a","term_name":"phytochelatin import into vacuole","termid":"GO:0071995"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_03497":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"phytochelatin 2 import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PC2 import into vacuole","type":"exact"}],"termid":"GO:0036246","terms_by_termid":{"GO:0036246":null}}


id: GO:0060523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental growth process in which solid chords of prostate epithelium increase in length.","definition_xrefs":["PMID:18977204","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branch elongation of an epithelium","termid":"GO:0060602"},{"relation_name":"is_a","term_name":"prostate gland morphogenetic growth","termid":"GO:0060737"},{"relation_name":"is_a","term_name":"prostate gland epithelium morphogenesis","termid":"GO:0060740"},{"relation_name":"part_of","term_name":"branching involved in prostate gland morphogenesis","termid":"GO:0060442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prostate epithelial cord elongation","termid":"GO:0060523"}


id: GO:0030440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mcc"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKK during sporulation (sensu Fungi) (obsolete GO:0030440)","synonyms":[{"name":"activation of MAPKK during sporulation (sensu Fungi)","type":"exact"}],"termid":"GO:0030440"}


id: MONDO:0007118
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any anhidrosis in which the cause of the disease is a mutation in the ITPR2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anhidrosis","termid":"MONDO:0006527"},{"relation_name":"is_a","term_name":"subcutaneous tissue disorder","termid":"MONDO:0019296"},{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"isolated anhidrosis with normal sweat glands","secondary_identifiers":["UMLS:C5568836","GARD:17843","DOID:0060603","MEDGEN:1800259","OMIM:106190","Orphanet:468666"],"synonyms":[{"name":"ANHD","type":"related"},{"name":"Dann-Epstein-Sohar syndrome","type":"exact"},{"name":"ITPR2 anhidrosis","type":"exact"},{"name":"anhidrosis caused by mutation in ITPR2","type":"exact"},{"name":"anhidrosis, isolated, with normal sweat glands","type":"related"},{"name":"isolated generalised anhidrosis with normal sweat glands","type":"related"},{"name":"isolated generalized anhidrosis with normal sweat glands","type":"related"}],"termid":"MONDO:0007118","xrefs":{"Monarch":{"xref_id":"0007118"}}}


id: MONDO:0014413
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Orofaciodigital syndrome type 14 is a rare subtype of orofaciodigital syndrome, with autosomal recessive inheritance and C2CD3 mutations, characterized by severe microcephaly, trigonocephaly, severe intellectual disability and micropenis, in addition to oral, facial and digital malformations (gingival frenulae, lingual hamartomas, cleft/lobulated tongue, cleft palate, telecanthus, up-slanting palpebral fissures, microretrognathia, postaxial polydactyly of hands and duplication of hallux). Corpus callosum agenesis and vermis hypoplasia with molar tooth sign, on brain imaging, are also associated.","definition_xrefs":["Orphanet:434179"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"orofaciodigital syndrome","termid":"MONDO:0015375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"orofaciodigital syndrome type 14","secondary_identifiers":["MEDGEN:1635470","DOID:0060958","GARD:13655","UMLS:C4706604","OMIM:615948","SCTID:763837007"],"synonyms":[{"name":"C2CD3 orofaciodigital syndrome","type":"exact"},{"name":"OFD14","type":"exact"},{"name":"microcephaly-cerebral malformation-orofaciodigital syndrome","type":"exact"},{"name":"oral-facial-digital syndrome type 14","type":"exact"},{"name":"orofaciodigital syndrome 14","type":"related"},{"name":"orofaciodigital syndrome XIV","type":"related"},{"name":"orofaciodigital syndrome caused by mutation in C2CD3","type":"exact"},{"name":"orofaciodigital syndrome type 14","type":"exact"}],"termid":"MONDO:0014413","xrefs":{"Monarch":{"xref_id":"0014413"}}}


id: PBO:0002705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0061 family protein","termid":"PBO:0002705"}


id: MOD:00001
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an alkyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkylated residue","synonyms":[{"name":"AlkylRes","type":"exact"}],"termid":"MOD:00001"}


id: PBO:0117169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHD4 antisense RNA 1","termid":"PBO:0117169"}


id: PBO:0069260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 516, pseudogene","termid":"PBO:0069260"}


id: GO:0045668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of osteoblast differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of osteoblast differentiation","termid":"GO:0045667"},{"relation_name":"negatively_regulates","term_name":"osteoblast differentiation","termid":"GO:0001649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of osteoblast differentiation","synonyms":[{"name":"down regulation of osteoblast differentiation","type":"exact"},{"name":"down-regulation of osteoblast differentiation","type":"exact"},{"name":"downregulation of osteoblast differentiation","type":"exact"},{"name":"inhibition of osteoblast differentiation","type":"narrow"}],"termid":"GO:0045668"}


id: GO:0055076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of transition metal ions within an organism or cell. A transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver.","definition_xrefs":["GOC:jid","GOC:mah","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete transition metal ion homeostasis (obsolete GO:0055076)","termid":"GO:0055076"}


id: MONDO:0018137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 1 temperature sensitive oculocutaneous albinism (OCA1-TS) is an extremely rare form of OCA1 characterized by the production of temperature sensitive tyrosinase proteins leading to dark hair on the legs, arms and chest (cooler body areas) and white hair on the scalp, axilla and pubic area (warmer body areas).","definition_xrefs":["Orphanet:352737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism type 1","termid":"MONDO:0018135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"temperature-sensitive oculocutaneous albinism type 1","secondary_identifiers":["MEDGEN:337736","UMLS:C1847132","GARD:17530"],"synonyms":[{"name":"OCA1-TS","type":"exact"},{"name":"TS OCA type 1","type":"exact"}],"termid":"MONDO:0018137","xrefs":{"Monarch":{"xref_id":"0018137"}}}


id: PBO:0047771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box A3","termid":"PBO:0047771"}


id: PBO:0059801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 27","termid":"PBO:0059801"}


id: PBO:0002258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine-dependent methyltransferase (predicted)","termid":"PBO:0002258"}


id: GO:2000696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epithelial cell differentiation involved in kidney development.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"regulates","term_name":"epithelial cell differentiation involved in kidney development","termid":"GO:0035850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000696"}


id: GO:0120066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within gastric smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the distal part of the pylorus between the pyloric antrum and the pyloric sphincter.","definition_xrefs":["GOC:sl","PMID:15890336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stomach pylorus smooth muscle contraction","termid":"GO:0120064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pyloric canal smooth muscle contraction","termid":"GO:0120066"}


id: PBO:0070426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribulose-5-phosphate-3-epimerase pseudogene 4","termid":"PBO:0070426"}


id: GO:0019360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinamide nucleotide from other compounds, including niacinamide.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nicotinamide metabolic process","termid":"GO:0006769"},{"relation_name":"is_a","term_name":"nicotinamide nucleotide biosynthetic process","termid":"GO:0019359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006766","GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"nicotinamide nucleotide biosynthetic process from niacinamide","synonyms":[{"name":"nicotinamide nucleotide anabolism from niacinamide","type":"exact"},{"name":"nicotinamide nucleotide formation from niacinamide","type":"exact"},{"name":"nicotinamide nucleotide synthesis from niacinamide","type":"exact"}],"termid":"GO:0019360"}


id: MONDO:0010816
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Qazi-Markouizos syndrome is characterized principally by non-progressive central hypotonia, chronic constipation, severe psychomotor retardation, abnormal dermatoglyphics, dysharmonic skeletal maturation and disproportionate muscle fibers. Seizures or an abnormal electroencephalograph were also reported. To date, the syndrome has been reported in three unrelated Puerto Rican boys.","definition_xrefs":["Orphanet:3010"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Qazi Markouizos syndrome","secondary_identifiers":["MESH:C536259","DOID:0050740","MEDGEN:443987","OMIM:600096","GARD:371","UMLS:C2931142","SCTID:721887007"],"synonyms":[{"name":"Dysharmonic skeletal maturation - muscular fiber disproportion","type":"exact"},{"name":"Dysharmonic skeletal maturation - muscular fibre disproportion","type":"exact"},{"name":"Dysharmonic skeletal maturation muscular fiber disproportion","type":"related"},{"name":"Dysharmonic skeletal maturation muscular fibre disproportion","type":"related"},{"name":"Dysharmonic skeletal maturation-muscular fiber disproportion syndrome","type":"exact"},{"name":"Dysharmonic skeletal maturation-muscular fibre disproportion syndrome","type":"exact"},{"name":"PUERTO RICAN infant hypotonia syndrome","type":"related"},{"name":"Puertorican infant hypotonia syndrome","type":"related"},{"name":"Qazi-Markouizos syndrome","type":"exact"},{"name":"hypotonia, psychomotor retardation, seizures, delayed and Dysharmonic skeletal maturation, and congenital fiber type disproportion","type":"related"},{"name":"hypotonia, psychomotor retardation, seizures, delayed and Dysharmonic skeletal maturation, and congenital fibre type disproportion","type":"related"}],"termid":"MONDO:0010816","xrefs":{"Monarch":{"xref_id":"0010816"}}}


id: GO:0071647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of production of macrophage inflammatory protein-1 gamma.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemokine production","termid":"GO:0032682"},{"relation_name":"is_a","term_name":"regulation of macrophage inflammatory protein-1 gamma production","termid":"GO:0071646"},{"relation_name":"negatively_regulates","term_name":"macrophage inflammatory protein-1 gamma production","termid":"GO:0071607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of macrophage inflammatory protein-1 gamma production","synonyms":[{"name":"negative regulation of CCL9 production","type":"exact"},{"name":"negative regulation of MIP-1g production","type":"exact"},{"name":"negative regulation of chemokine (C-C motif) ligand 9 production","type":"exact"}],"termid":"GO:0071647"}


id: PBO:0046359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosulfine alpha pseudogene 1","termid":"PBO:0046359"}


id: PBO:0075841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU72 like 2","termid":"PBO:0075841"}


id: FYPO:0005022
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, localization of a protein to the actomyosin contractile ring is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to actomyosin contractile ring","termid":"FYPO:0002560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000032","FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"decreased rate of protein localization to actomyosin contractile ring","synonyms":[{"name":"decreased rate of protein localisation to actomyosin contractile ring","type":"exact"},{"name":"decreased rate of protein localization to actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"decreased rate of protein localization to actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"decreased rate of protein localization to actomyosin contractile ring involved in mitotic cytokinesis","type":"exact"},{"name":"decreased rate of protein localization to cytokinetic contractile ring","type":"exact"},{"name":"decreased rate of protein localization to mitotic contractile ring","type":"exact"},{"name":"decreased rate of protein recruitment to actomyosin contractile ring","type":"related"},{"name":"reduced rate of protein localization to actomyosin contractile ring","type":"exact"}],"termid":"FYPO:0005022"}


id: PBO:0089440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces japonicus specific low-complexity Glycine rich protein","termid":"PBO:0089440"}


id: GO:0060127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized structural and/or functional features of a prolactin secreting cell. A prolactin secreting cell is an acidophilic cell of the anterior pituitary that produces prolactin.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"adenohypophysis development","termid":"GO:0021984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prolactin secreting cell differentiation","synonyms":[{"name":"epsilon-acidophil differentiation","type":"exact"},{"name":"lactotrope differentiation","type":"exact"},{"name":"lactotroph differentiation","type":"exact"},{"name":"lactotropic cell differentiation","type":"exact"},{"name":"mammotrope differentiation","type":"exact"},{"name":"mammotroph differentiation","type":"exact"},{"name":"mammotrophic cell differentiation","type":"exact"},{"name":"mammotropic cell differentiation","type":"exact"}],"termid":"GO:0060127"}


id: PBO:0031287
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transcription_regulation_phenotype","termid":"PBO:0031287"}


id: FYPO:0007183
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is increased during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein kinase activity","termid":"FYPO:0002700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"increased protein kinase activity during mitotic interphase","synonyms":[{"name":"increased protein kinase activity during interphase of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0007183"}


id: GO:2000717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of maintenance of mitotic sister chromatid cohesion along the chromosome arms.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of maintenance of mitotic sister chromatid cohesion","termid":"GO:0034184"},{"relation_name":"is_a","term_name":"regulation of maintenance of mitotic sister chromatid cohesion, arms","termid":"GO:2000715"},{"relation_name":"positively_regulates","term_name":"maintenance of mitotic sister chromatid cohesion, arms","termid":"GO:0071959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of maintenance of mitotic sister chromatid cohesion, arms","synonyms":[{"name":"positive regulation of maintenance of mitotic sister chromatin cohesion along arms","type":"exact"},{"name":"positive regulation of maintenance of sister chromatin cohesion along arms at mitosis","type":"exact"}],"termid":"GO:2000717"}


