# terms

id: PBO:0046588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 30","termid":"PBO:0046588"}


id: GO:0006132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydrolipoylprotein reduction (obsolete GO:0006132)","synonyms":[{"name":"dihydrolipoylprotein reduction","type":"exact"}],"termid":"GO:0006132"}


id: GO:0090265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the process of immune complex clearance by monocytes or macrophages.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"regulation of immune complex clearance by monocytes and macrophages","termid":"GO:0090264"},{"relation_name":"positively_regulates","term_name":"immune complex clearance by monocytes and macrophages","termid":"GO:0002436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of immune complex clearance by monocytes and macrophages","termid":"GO:0090265"}


id: PBO:0050594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2","termid":"PBO:0050594"}


id: SO:0002160
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that changes the length of one or more sequence features.","direct_ancestors":[{"relation_name":"is_a","term_name":"structural_variant","termid":"SO:0001537"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence_length_variant","synonyms":[{"name":"sequence length variant","type":"exact"}],"termid":"SO:0002160"}


id: PBO:0082124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acid phosphatase; involved in the non-vesicular transport of sterols in both directions between the endoplasmic reticulum and plasma membrane; deletion confers sensitivity to nickel","termid":"PBO:0082124"}


id: PBO:0016076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Hal4","termid":"PBO:0016076"}


id: GO:1905208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiocyte differentiation.","definition_xrefs":["GOC:BHF_miRNA","GOC:BHF","GOC:TermGenie","GOC:bc","GO_REF:0000058","PMID:23069713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of cardiocyte differentiation","termid":"GO:1905207"},{"relation_name":"negatively_regulates","term_name":"cardiocyte differentiation","termid":"GO:0035051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiocyte differentiation","synonyms":[{"name":"down regulation of cardiac cell differentiation","type":"exact"},{"name":"down regulation of cardiocyte differentiation","type":"exact"},{"name":"down regulation of heart cell differentiation","type":"exact"},{"name":"down-regulation of cardiac cell differentiation","type":"exact"},{"name":"down-regulation of cardiocyte differentiation","type":"exact"},{"name":"down-regulation of heart cell differentiation","type":"exact"},{"name":"downregulation of cardiac cell differentiation","type":"exact"},{"name":"downregulation of cardiocyte differentiation","type":"exact"},{"name":"downregulation of heart cell differentiation","type":"exact"},{"name":"inhibition of cardiac cell differentiation","type":"narrow"},{"name":"inhibition of cardiocyte differentiation","type":"narrow"},{"name":"inhibition of heart cell differentiation","type":"narrow"},{"name":"negative regulation of cardiac cell differentiation","type":"exact"},{"name":"negative regulation of heart cell differentiation","type":"exact"}],"termid":"GO:1905208"}


id: PBO:0013758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomevalonate kinase Erg8 (predicted)","termid":"PBO:0013758"}


id: PBO:0062343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily K member 2","termid":"PBO:0062343"}


id: PBO:0087527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of MRX complex with Mre11p and Xrs2p; complex is involved in processing double-strand DNA breaks in vegetative cells, initiation of meiotic DSBs, telomere maintenance, and nonhomologous end joining; forms nuclear foci upon DNA replication stress","termid":"PBO:0087527"}


id: RO:HOM0000031
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Paedomorphosis that is produced by precocious sexual maturation of an organism still in a morphologically juvenile stage.","definition_xrefs":["ISBN:978-0674639416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_paedomorphorsis_relationship_with","termid":"RO:HOM0000029"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_progenesis_relationship_with","termid":"RO:HOM0000031"}


id: PR:Q9US57
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1002.01 gene.","definition_xrefs":["UniProtKB:Q9US57","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1002.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.01","synonyms":[{"name":"Spom972h-SPAC1002.01","type":"exact"}],"termid":"PR:Q9US57"}


id: GO:0097630
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the omegasome membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mf","PMID:18725538","PMID:24591649"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of omegasome membrane (obsolete GO:0097630)","synonyms":[{"name":"intrinsic to omegasome membrane","type":"narrow"}],"termid":"GO:0097630"}


id: MONDO:0008803
data:
  {"annotated_genes":["SJAG_04270"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008726"},{"annotations":[86867],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020667"}]},"cv_name":"mondo","definition":"Antley-Bixler syndrome is a very rare disorder characterized by craniosynostosis with midface hypoplasia, radiohumeral synostosis, femoral bowing and joint contractures.","definition_xrefs":["Orphanet:83"],"direct_ancestors":[{"relation_name":"is_a","term_name":"craniosynostosis syndrome, autosomal recessive","termid":"MONDO:0011679"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0006025"],"is_obsolete":false,"name":"Antley-Bixler syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:5826","UMLS:C5234850","DOID:0050462","MEDGEN:1714404","DOID:0081289","NANDO:1200669","NANDO:2200975","icd11.foundation:2027710139","SCTID:62964007","NORD:792"],"synonyms":[{"name":"Antley Bixler syndrome","type":"related"},{"name":"multisynostotic osteodysgenesis with long bone fractures","type":"related"},{"name":"osteodysgenesis, multisynostotic with fractures","type":"related"},{"name":"osteodysgenesis, multisynostotic, with fractures","type":"related"},{"name":"trapezoidocephaly synostosis syndrome","type":"related"},{"name":"trapezoidocephaly-synostosis syndrome","type":"exact"}],"termid":"MONDO:0008803","terms_by_termid":{"MONDO:0008726":null,"MONDO:0020667":null},"xrefs":{"Monarch":{"xref_id":"0008803"}}}


id: PBO:0074260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLCO4A1 antisense RNA 1","termid":"PBO:0074260"}


id: GO:0062082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a MHC class Ib molecule of the HLA-A subclass to mediate signaling that inhibits activation of a lymphocyte.","definition_xrefs":["DOI:10.1002/9780470015902.a0024246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibitory MHC class Ib receptor activity","termid":"GO:0062080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"HLA-E specific inhibitory MHC class Ib receptor activity","termid":"GO:0062082"}


id: GO:0061049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth of a cardiac muscle cell, where growth contributes to the progression of the cell over time from its initial formation to its mature state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental cell growth","termid":"GO:0048588"},{"relation_name":"part_of","term_name":"physiological cardiac muscle hypertrophy","termid":"GO:0003301"},{"relation_name":"part_of","term_name":"cardiac muscle cell development","termid":"GO:0055013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell growth involved in cardiac muscle cell development","synonyms":[{"name":"cardiac muscle cell hypertrophy","type":"related"},{"name":"cardiomyocyte growth","type":"related"},{"name":"heart muscle cell growth","type":"related"}],"termid":"GO:0061049"}


id: PBO:0055785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LONRF2 pseudogene 5","termid":"PBO:0055785"}


id: GO:0043418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of homocysteine, the amino acid alpha-amino-gamma-mercaptobutanoic acid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid catabolic process","termid":"GO:0000098"},{"relation_name":"is_a","term_name":"homocysteine metabolic process","termid":"GO:0050667"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"},{"relation_name":"is_a","term_name":"alpha-amino acid catabolic process","termid":"GO:1901606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006790","GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"homocysteine catabolic process","synonyms":[{"name":"homocysteine breakdown","type":"exact"},{"name":"homocysteine catabolism","type":"exact"},{"name":"homocysteine degradation","type":"exact"}],"termid":"GO:0043418"}


id: PBO:0002284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome component alpha 5, Pup2 (predicted)","termid":"PBO:0002284"}


id: MONDO:0011129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"open-angle glaucoma","termid":"MONDO:0005338"},{"relation_name":"is_a","term_name":"congenital glaucoma","termid":"MONDO:0020366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"glaucoma type 1C","secondary_identifiers":["GARD:2484","MEDGEN:356544","UMLS:C1866483","OMIM:601682"],"synonyms":[{"name":"GLC1C","type":"related"},{"name":"glaucoma 1, primary open angle, C","type":"related"},{"name":"glaucoma 1C, primary open angle","type":"exact"}],"termid":"MONDO:0011129","xrefs":{"Monarch":{"xref_id":"0011129"}}}


id: MONDO:0004708
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Stage 0 includes: For squamous cell carcinoma: Tis (HGD), N0, M0, G1, GX, Tumor location: Any. For adenocarcinoma: Tis (HGD), N0, M0, G1, GX. Tis: High-grade dysplasia. N0: No regional lymph node metastasis. M0: No distant metastasis. G1: Well differentiated. GX: Grade cannot be assessed-stage grouping as G1. Tumor location: Location of the primary cancer site is defined by the position of the upper (proximal) edge of the tumor in the esophagus. (AJCC 7th ed.)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in situ carcinoma","termid":"MONDO:0004647"},{"relation_name":"is_a","term_name":"carcinoma of esophagus","termid":"MONDO:0019086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"esophagus carcinoma in situ","secondary_identifiers":["UMLS:C0154059","ICD10CM:D00.1","ICD9:230.1","MEDGEN:56332","DOID:9095","NCIT:C89771","SCTID:92585006"],"synonyms":[{"name":"carcinoma in situ of esophagus","type":"exact"},{"name":"carcinoma in situ of oesophagus","type":"exact"},{"name":"esophageal carcinoma in situ","type":"exact"},{"name":"esophageal carcinoma in situ aJCC v7","type":"exact"},{"name":"esophagus in situ carcinoma","type":"exact"},{"name":"oesophagus in situ carcinoma","type":"exact"},{"name":"severe esophageal dysplasia","type":"exact"},{"name":"severe esophageal dysplasia aJCC v7","type":"exact"},{"name":"stage 0 carcinoma of the esophagus","type":"exact"},{"name":"stage 0 carcinoma of the oesophagus","type":"exact"},{"name":"stage 0 esophageal cancer","type":"exact"},{"name":"stage 0 esophageal cancer aJCC v7","type":"exact"},{"name":"stage 0 esophageal carcinoma in situ","type":"exact"},{"name":"stage 0 esophagus carcinoma","type":"exact"},{"name":"stage 0 oesophagus carcinoma","type":"exact"}],"termid":"MONDO:0004708","xrefs":{"Monarch":{"xref_id":"0004708"}}}


id: PBO:0069735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1016, pseudogene","termid":"PBO:0069735"}


id: PR:O94708
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1259.08 gene.","definition_xrefs":["UniProtKB:O94708","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1259.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.08","synonyms":[{"name":"Spom972h-SPCC1259.08","type":"exact"}],"termid":"PR:O94708"}


id: GO:0004869
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a cysteine-type endopeptidase.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase inhibitor activity","termid":"GO:0004866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0004857","GO:0030234","GO:0003674","GO:0098772","GO:0140678"],"is_obsolete":false,"name":"cysteine-type endopeptidase inhibitor activity","secondary_identifiers":["GO:0004870"],"synonyms":[{"name":"cystatin","type":"narrow"},{"name":"cysteine protease inhibitor activity","type":"narrow"},{"name":"thiol protease inhibitor","type":"narrow"}],"termid":"GO:0004869"}


id: PBO:0076739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-complex 11 like 1","termid":"PBO:0076739"}


id: MONDO:0019839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary hypophysitis","termid":"MONDO:0019835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"panhypophysitis","secondary_identifiers":["Orphanet:95513","MEDGEN:1674527","UMLS:C5190786","GARD:19285"],"synonyms":[{"name":"Infundibulo-panhypophysitis","type":"exact"}],"termid":"MONDO:0019839","xrefs":{"Monarch":{"xref_id":"0019839"}}}


id: MONDO:0009659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare autosomal recessive lysosomal storage disease caused by deficiency of the enzyme galactosamine-6-sulfatase. It is characterized by skeletal and central nervous system deficits.","definition_xrefs":["NCIT:C84901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucopolysaccharidosis type 4","termid":"MONDO:0018938"},{"relation_name":"is_a","term_name":"lysosomal storage disease with skeletal involvement","termid":"MONDO:0800088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"mucopolysaccharidosis type 4A","secondary_identifiers":["OMIM:253000","UMLS:C0086651","NANDO:2201178","SCTID:7259005","GARD:3785","Orphanet:309297","DOID:0111391","icd11.foundation:1919173641","ICD10CM:E76.210","MEDGEN:43375","NANDO:1200106"],"synonyms":[{"name":"GALNS deficiency","type":"exact"},{"name":"MPS 4A","type":"related"},{"name":"MPS IV A","type":"exact"},{"name":"MPS IVA","type":"related"},{"name":"MPS4A","type":"exact"},{"name":"MPSIVA","type":"exact"},{"name":"Morquio A disease","type":"broad"},{"name":"Morquio disease type A","type":"exact"},{"name":"Morquio syndrome A","type":"exact"},{"name":"N-acetylgalactosamine-6-sulfate sulfatase deficiency","type":"exact"},{"name":"galactosamine-6-sulfatase deficiency","type":"exact"},{"name":"mucopolysaccharidosis IVA","type":"exact"},{"name":"mucopolysaccharidosis type 4A","type":"exact"},{"name":"mucopolysaccharidosis type IVA","type":"exact"},{"name":"mucopolysaccharidosis, type 4A","type":"related"},{"name":"mucopolysaccharidosis, type IVA","type":"related"}],"termid":"MONDO:0009659","xrefs":{"Monarch":{"xref_id":"0009659"}}}


id: MONDO:0018454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of dysostosis that is caused by a modification of the individual's genome.","definition_xrefs":["MONDO:patterns/genetic"],"gene_count":0,"genotype_count":0,"name":"obsolete dysostosis of genetic origin (obsolete MONDO:0018454)","secondary_identifiers":["Orphanet:404568"],"synonyms":[{"name":"genetic dysostosis","type":"exact"}],"termid":"MONDO:0018454","xrefs":{"Monarch":{"xref_id":"0018454"}}}


id: PBO:0045349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyldiphosphatase 1","termid":"PBO:0045349"}


id: GO:0047102
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + NAD+ + 2-aminomuconate semialdehyde = NADH + 2-amino-muconate.","definition_xrefs":["MetaCyc:1.2.1.32-RXN","EC:1.2.1.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"aminomuconate-semialdehyde dehydrogenase activity","secondary_identifiers":["RHEA:14469","UM-BBD_reactionID:r1434","Reactome:R-HSA-71239"],"synonyms":[{"name":"2-aminomuconate semialdehyde dehydrogenase activity","type":"related"},{"name":"2-aminomuconate-6-semialdehyde:NAD+ 6-oxidoreductase activity","type":"related"},{"name":"2-hydroxymuconate semialdehyde dehydrogenase activity","type":"related"},{"name":"2-hydroxymuconic acid semialdehyde dehydrogenase activity","type":"related"},{"name":"2-hydroxymuconic semialdehyde dehydrogenase activity","type":"related"},{"name":"alpha-aminomuconic epsilon-semialdehyde dehydrogenase activity","type":"related"},{"name":"alpha-hydroxymuconic epsilon-semialdehyde dehydrogenase activity","type":"related"}],"termid":"GO:0047102"}


id: PBO:0080076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP38 divergent transcript","termid":"PBO:0080076"}


id: PBO:0058902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12120","termid":"PBO:0058902"}


id: MONDO:0020723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin D-dependent rickets, type 1","termid":"MONDO:0009924"},{"relation_name":"is_a","term_name":"abnormal mineralization disorder","termid":"MONDO:0800096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"vitamin D-dependent rickets, type 1A","secondary_identifiers":["GARD:18636","OMIM:264700","DOID:0080886"],"synonyms":[{"name":"1-Alpha, 25-Hydroxyvitamin D3 deficiency, selective","type":"related"},{"name":"1-Alpha-Hydroxylase deficiency","type":"related"},{"name":"25-hydroxycholecalciferol-1-Hydroxylase deficiency","type":"related"},{"name":"PDDR 1A","type":"related"},{"name":"VDDR1A","type":"related"},{"name":"pseudovitamin D-deficiency rickets, type 1A","type":"related"},{"name":"vitamin D dependency, type 1","type":"related"},{"name":"vitamin D hydroxylation-deficient rickets, type 1A","type":"related"},{"name":"vitamin D-dependent rickets, type 1A","type":"exact"},{"name":"vitamin D-dependent rickets, type I","type":"exact"}],"termid":"MONDO:0020723","xrefs":{"Monarch":{"xref_id":"0020723"}}}


id: PBO:0034601
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_iron_ion_binding","termid":"PBO:0034601"}


id: PBO:0080109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"utrophin","termid":"PBO:0080109"}


id: FYPO:0009105
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the divided nuclei are mislocalized during telophase of the mitotic cell cycle.","definition_xrefs":["PMID:37099380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized nucleus during vegetative growth","termid":"FYPO:0002071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"mislocalized nucleus during mitotic telophase","synonyms":[{"name":"abnormal nuclei location during mitotic telophase","type":"exact"},{"name":"abnormal nucleus location during mitotic telophase","type":"exact"},{"name":"abnormal nucleus position during mitotic telophase","type":"exact"},{"name":"abnormal nucleus positioning during mitotic telophase","type":"exact"},{"name":"mislocalised nuclei during mitotic telophase","type":"exact"},{"name":"mislocalised nucleus during mitotic telophase","type":"exact"}],"termid":"FYPO:0009105"}


id: GO:2000154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of flagellar cell motility.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of flagellar cell motility (obsolete GO:2000154)","synonyms":[{"name":"negative regulation of flagellar cell motility","type":"exact"}],"termid":"GO:2000154"}


id: PBO:0078335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon CTC) 1-7","termid":"PBO:0078335"}


id: PBO:0049627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 30","termid":"PBO:0049627"}


id: GO:0042491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized inner cell acquires specialized features of an auditory hair cell.","definition_xrefs":["GOC:jl","CL:0000201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hair cell differentiation","termid":"GO:0035315"},{"relation_name":"is_a","term_name":"inner ear receptor cell differentiation","termid":"GO:0060113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner ear auditory receptor cell differentiation","synonyms":[{"name":"auditory hair cell differentiation","type":"exact"},{"name":"auditory receptor cell differentiation","type":"related"}],"termid":"GO:0042491"}


id: MONDO:0016291
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Craniosynostosis, Herrmann-Opitz type is a rare bone development disorder characterized by intellectual disability, short stature, turribrachycephaly, facial dysmorphism (i.e. severe hypertelorism, hypoplasia of supraorbital ridges, abnormal ears, and micrognathia), bony defects of the occiput, and digital anomalies (incl. syndactyly, oligodactyly, and/or brachydactyly). Urethral atresia has also been reported. There have been no further descriptions in the literature since 1987.","definition_xrefs":["Orphanet:2145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"craniosynostosis, Herrmann-Opitz type","secondary_identifiers":["icd11.foundation:2048918601","GARD:18762","UMLS:C4706536","MEDGEN:1633959"],"synonyms":[{"name":"Herrmann Opitz craniosynostosis","type":"related"}],"termid":"MONDO:0016291","xrefs":{"Monarch":{"xref_id":"0016291"}}}


id: PBO:0112692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome-b5 reductase activity/ NAD(P)H-dependent reductase for Dph3, Cbr1","termid":"PBO:0112692"}


id: PBO:0026981
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete_prospore_membrane_closure","termid":"PBO:0026981"}


id: MONDO:0008323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic form of low-renin hypertension characterized by hypertension associated with decreased plasma levels of potassium and aldosterone.","definition_xrefs":["Orphanet:526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"renal tubular transport disease","termid":"MONDO:0006510"},{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Liddle syndrome","secondary_identifiers":["SCTID:707747007","MEDGEN:67439","NANDO:2200363","MedDRA:10037113","MedDRA:10052313","UMLS:C0221043","MESH:D056929","NCIT:C84827","OMIMPS:177200","GARD:7381","DOID:0050477","NANDO:2100131","NORD:2034"],"synonyms":[{"name":"LIDLS","type":"related"},{"name":"Liddle syndrome","type":"exact"},{"name":"Liddle's syndrome","type":"exact"},{"name":"pseudoaldosteronism","type":"exact"},{"name":"pseudohyperaldosteronism type 1","type":"narrow"}],"termid":"MONDO:0008323","xrefs":{"Monarch":{"xref_id":"0008323"}}}


id: GO:0008164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete organophosphorus resistance (obsolete GO:0008164)","synonyms":[{"name":"organophosphorus resistance","type":"exact"}],"termid":"GO:0008164"}


id: PBO:0076287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symplekin scaffold protein","termid":"PBO:0076287"}


id: MONDO:0010984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of Usher syndrome type I that is caused by homozygous or compound heterozygous mutation in the gene encoding cadherin-23 (CDH23) on chromosome 10q22. It is inherited in an autosomal recessive manner.","definition_xrefs":["OMIM:601067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Usher syndrome type 1","termid":"MONDO:0010168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Usher syndrome type 1D","secondary_identifiers":["ICD10CM:H35.5","DOID:0110831","GARD:5438","MEDGEN:322051","UMLS:C1832845"],"synonyms":[{"name":"USH1D","type":"exact"},{"name":"USHER syndrome, type ID","type":"related"},{"name":"Ush1D/F, Cdh23/Pcdh15, digenic","type":"related"},{"name":"Usher syndrome type 1D","type":"exact"},{"name":"Usher syndrome type ID","type":"exact"},{"name":"Usher syndrome, type 1D","type":"related"},{"name":"Usher syndrome, type 1D/F digenic","type":"exact"},{"name":"Usher syndrome, type Id/F, Cdh23/Pcdh15, digenic","type":"related"}],"termid":"MONDO:0010984","xrefs":{"Monarch":{"xref_id":"0010984"}}}


id: PBO:0089503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3H and G-patch domain protein Sqs1","termid":"PBO:0089503"}


id: MONDO:0957115
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular channelopathy","termid":"MONDO:0019119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurological muscular channelopathy due to a genetic ryanodine receptor defect","secondary_identifiers":["GARD:19567","Orphanet:98742","UMLS:C5681684","MEDGEN:1842742"],"termid":"MONDO:0957115","xrefs":{"Monarch":{"xref_id":"0957115"}}}


id: FYECO:0000408
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which canavanin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ canavanin","synonyms":[{"name":"canavanin added","type":"exact"}],"termid":"FYECO:0000408"}


id: PBO:0084144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity histidine permease; also involved in the transport of manganese ions","termid":"PBO:0084144"}


id: GO:0001748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the optic placode over time, from its formation to the mature structure. During embryonic stage 12 the placode starts to invaginate, forming a pouch. Cells that will form Bolwig's organ segregate from the ventral lip of this pouch, remaining in the head epidermis. The remainder of the invagination loses contact with the outer surface and becomes the optic lobe. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["PMID:8402833","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"insect visual primordium development","secondary_identifiers":["GO:0048049"],"synonyms":[{"name":"optic lobe and Bolwig's organ precursor development","type":"exact"},{"name":"optic lobe placode development","type":"exact"},{"name":"optic placode development","type":"broad"}],"termid":"GO:0001748"}


id: PBO:0013048
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA Break Localizing","termid":"PBO:0013048"}


id: PBO:0047418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and WD repeat domain containing 9","termid":"PBO:0047418"}


id: GO:0016285
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the release of an N-terminal amino acid, preferentially alanine, from a wide range of peptides, amides and arylamides.","definition_xrefs":["EC:3.4.11.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminopeptidase activity","termid":"GO:0004177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0008233","GO:0003824","GO:0140096","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"alanyl aminopeptidase activity","secondary_identifiers":["MetaCyc:3.4.11.14-RXN"],"synonyms":[{"name":"aminopolypeptidase activity","type":"broad"},{"name":"arylamidase activity","type":"narrow"},{"name":"cytosol alanyl aminopeptidase activity","type":"exact"},{"name":"cytosol aminopeptidase III activity","type":"narrow"},{"name":"human liver aminopeptidase","type":"narrow"},{"name":"liver aminopeptidase activity","type":"narrow"},{"name":"membrane alanine aminopeptidase","type":"narrow"},{"name":"membrane alanyl aminopeptidase","type":"narrow"},{"name":"puromycin-sensitive aminopeptidase activity","type":"narrow"},{"name":"soluble alanyl aminopeptidase activity","type":"related"},{"name":"thiol-activated aminopeptidase activity","type":"related"}],"termid":"GO:0016285"}


id: GO:0099527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals that conveys information from the postsynapse to the nucleus via cytoskeletal transport of a protein from a postsynapse to the component to the nucleus where it affects biochemical processes that occur in the nucleus (e.g DNA transcription, mRNA splicing, or DNA/histone modifications).","definition_xrefs":["GOC:dos","PMID:24317321","PMID:25652077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic signal transduction","termid":"GO:0098926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"postsynapse to nucleus signaling pathway","synonyms":[{"name":"postsynaptic signaling to nucleus","type":"exact"}],"termid":"GO:0099527"}


id: PR:Q9UR27
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrpl31 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UR27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L31, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.11","synonyms":[{"name":"Spom972h-mrpl31","type":"exact"},{"name":"negative regulator of cdc42 protein nrf20 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UR27"}


id: GO:0060387
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structure that lies outside the plasma membrane and surrounds the egg. The fertilization envelope forms from the vitelline membrane after fertilization as a result of cortical granule release.","definition_xrefs":["GOC:dph","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"egg coat","termid":"GO:0035805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"fertilization envelope","synonyms":[{"name":"fertilization membrane","type":"related"}],"termid":"GO:0060387"}


id: PBO:0051510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of nuclear factor kappa B kinase subunit gamma pseudogene 1","termid":"PBO:0051510"}


id: GO:0001526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Transfer of sulfate to a proteoglycan (a glycoprotein whose carbohydrate units are glycosaminoglycans) using 3'-phosphoadenyl sulfate.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete proteoglycan sulfate transfer (obsolete GO:0001526)","synonyms":[{"name":"proteoglycan sulfate transfer","type":"exact"},{"name":"proteoglycan sulphate transfer","type":"exact"}],"termid":"GO:0001526"}


id: PBO:0028857
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_splicing_of_mRNA_introns_with_low_A/U_content_and_polypyrimidine_tracts_distal_to_branch_site","termid":"PBO:0028857"}


id: PBO:0027060
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_endo-1,6-beta-glucosidase_activity","termid":"PBO:0027060"}


id: PBO:0073982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 24 member 3","termid":"PBO:0073982"}


id: PR:O14269
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- iss10 gene.","definition_xrefs":["UniProtKB:O14269","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C7D4.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.14c","synonyms":[{"name":"Spom972h-iss10","type":"exact"}],"termid":"PR:O14269"}


id: GO:0102210
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + a rhamnogalacturonan type I = [rhamnogalacturonan I oligosaccharide]-alpha-L-rhamnose + 4-deoxy-4,5-unsaturated D-galactopyranosyluronate-[rhamnogalacturonan I oligosaccharide].","definition_xrefs":["EC:4.2.2.23","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"rhamnogalacturonan endolyase activity","secondary_identifiers":["MetaCyc:RXN-12173"],"termid":"GO:0102210"}


id: PBO:0070445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 2","termid":"PBO:0070445"}


id: GO:0102326
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxy-6-oxo-6-(2,3-dihydroxyphenyl)-hexa-2,4-dienoate + H2O = 2,3-dihydroxybenzoate + 2-oxopent-4-enoate + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxy-6-oxo-6-(2,3-dihydroxyphenyl)-hexa-2,4-dienoate hydrolase activity (obsolete GO:0102326)","termid":"GO:0102326"}


id: MONDO:0045049
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cataract","termid":"MONDO:0005129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"hypermature cataract","secondary_identifiers":["ICD9:366.18","SCTID:267626000"],"synonyms":[{"name":"hypermature cataract","type":"exact"}],"termid":"MONDO:0045049","xrefs":{"Monarch":{"xref_id":"0045049"}}}


id: MONDO:0007774
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An abnormal response to a stimulus applied to the sensory components of the nervous system. This may take the form of increased, decreased, or absent reflexes.","definition_xrefs":["MESH:D012021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperreflexia","secondary_identifiers":["UMLS:C0151889","OMIM:145290","HP:0001347","icd11.foundation:514864448","MEDGEN:57738"],"synonyms":[{"name":"HRX","type":"related"},{"name":"hyperreflexia","type":"exact"},{"name":"hyperreflexia (disease)","type":"exact"}],"termid":"MONDO:0007774","xrefs":{"Monarch":{"xref_id":"0007774"}}}


id: PBO:0078251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 26/OR9-2 (pseudogene)","termid":"PBO:0078251"}


id: PBO:0049297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase mu 1","termid":"PBO:0049297"}


id: null:local:computer file
data:
  {"annotation_feature_type":"gene","cv_name":"null","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"computer file","termid":"null:local:computer file"}


id: FYPO:0007823
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121184,121185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007824"}]},"cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which any aspect of quorum sensing is abnormal.","definition_xrefs":["GO:0009372","PMID:31150379","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02592":null},"genotype_count":2,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal quorum sensing","references_by_uniquename":{"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_00266","SJAG_02592"],"single_locus_genotype_uniquenames":["sty1delta","atf1delta"],"termid":"FYPO:0007823","terms_by_termid":{"FYECO:0000314":null,"FYPO:0007824":null}}


id: PBO:0003175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoserine O-acetyltransferase (predicted)","termid":"PBO:0003175"}


id: PBO:0111340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit processome, U3 snoRNP-associated WD repeat protein Nan1/Utp17","termid":"PBO:0111340"}


id: PBO:0070906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 14","termid":"PBO:0070906"}


id: PBO:0034595
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_frequency_of_meiotic_crossover_associated_with_gene_conversion","termid":"PBO:0034595"}


id: PBO:0063751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 16","termid":"PBO:0063751"}


id: PBO:0054566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1968","termid":"PBO:0054566"}


id: GO:0034545
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: fumarylpyruvate + H2O = fumarate + pyruvate + H+.","definition_xrefs":["UM-BBD_reactionID:r0811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"fumarylpyruvate hydrolase activity","secondary_identifiers":["RHEA:26168","EC:3.7.1.20"],"termid":"GO:0034545"}


id: PBO:0038432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetoacetyl-CoA synthetase","termid":"PBO:0038432"}


id: FYPO:0005433
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of meiotic recombination at one or more recombination hotspots is decreased to the background level. The basal rate of recombination (i.e. away from hotspots) may remain normal or may be decreased.","definition_xrefs":["PomBase:mah","PMID:12019258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased meiotic recombination","termid":"FYPO:0000485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0000293"],"is_obsolete":false,"name":"decreased meiotic recombination at hotspot","synonyms":[{"name":"decreased meiotic recombination at recombination hotspot","type":"exact"},{"name":"hotspot-specific decreased meiotic recombination","type":"exact"},{"name":"reduced meiotic recombination at hotspot","type":"exact"}],"termid":"FYPO:0005433"}


id: MONDO:0000038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hyper-IgE recurrent infection syndrome (obsolete MONDO:0000038)","termid":"MONDO:0000038","xrefs":{"Monarch":{"xref_id":"0000038"}}}


id: PBO:0067076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 107, pseudogene","termid":"PBO:0067076"}


id: PBO:0081377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 215","termid":"PBO:0081377"}


id: PBO:0074281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"slit guidance ligand 2","termid":"PBO:0074281"}


id: PBO:0069489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 756, pseudogene","termid":"PBO:0069489"}


id: FYPO:0007380
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is longer than normal, and a new growth zone forms along the lateral portion of the cell (often in the middle) before septation, such that a single cell grows in the form of the letter T.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"T-shaped vegetative cell","termid":"FYPO:0007379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005568"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000005","FYPO:0000004","FYPO:0005447","FYPO:0001985","FYPO:0005568"],"is_obsolete":false,"name":"elongated T-shaped vegetative cell","synonyms":[{"name":"elongated T-shaped cell during vegetative growth","type":"exact"},{"name":"elongated T-shaped vegetative cell during mitotic cell cycle","type":"related"},{"name":"long T-shaped vegetative cell","type":"exact"}],"termid":"FYPO:0007380"}


id: PBO:0089640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Cox14","termid":"PBO:0089640"}


id: GO:0016408
data:
  {"annotated_genes":["SJAG_04178","SJAG_04107","SJAG_04972","SJAG_00413","SJAG_02305"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74896],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003985"},{"annotations":[60359,58816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004321"},{"annotations":[80660,78596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004758"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an acyl group to a carbon atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00413":null,"SJAG_02305":null,"SJAG_04107":null,"SJAG_04178":null,"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"C-acyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"termid":"GO:0016408","terms_by_termid":{"GO:0003985":null,"GO:0004321":null,"GO:0004758":null}}


id: PBO:0074028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 16","termid":"PBO:0074028"}


id: MONDO:0006972
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of alveolitis or pneumonitis caused by hypersensitivity to high level of inhaled nitrogen oxides, decomposition products of silage.","definition_xrefs":["MESH:D012832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silo filler disease","secondary_identifiers":["MEDGEN:11428","SCTID:61233003","icd11.foundation:1960063586","UMLS:C0037120","DOID:4374"],"synonyms":[{"name":"silo filler disease","type":"exact"},{"name":"silo filler's disease","type":"related"},{"name":"silo-fillers' disease","type":"exact"}],"termid":"MONDO:0006972","xrefs":{"Monarch":{"xref_id":"0006972"}}}


id: PBO:0057574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 770","termid":"PBO:0057574"}


id: PBO:0014266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome regulatory particle, lid subcomplex subunit Rpn15/Dss11","termid":"PBO:0014266"}


id: GO:0044751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a human chorionic gonadotropin stimulus.","definition_xrefs":["PMID:21325635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to human chorionic gonadotropin","termid":"GO:0044752"},{"relation_name":"is_a","term_name":"cellular response to gonadotropin stimulus","termid":"GO:0071371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to human chorionic gonadotropin stimulus","synonyms":[{"name":"cellular response to human chorionic gonadotrophin stimulus","type":"exact"}],"termid":"GO:0044751"}


id: GO:0035105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer of a sterol regulatory element binding protein (SREBP) into the nucleus, across the nuclear membrane, in response to altered levels of one or more lipids. SREBPs are transcription factors that bind sterol regulatory elements (SREs), DNA motifs found in the promoters of target genes.","definition_xrefs":["GOC:bf","GOC:vw","PMID:12923525"],"gene_count":0,"genotype_count":0,"name":"obsolete sterol regulatory element binding protein import into nucleus (obsolete GO:0035105)","synonyms":[{"name":"SREBP import into nucleus","type":"exact"},{"name":"SREBP import into nucleus involved in sterol depletion response","type":"exact"},{"name":"SREBP nuclear translocation","type":"narrow"},{"name":"sterol depletion response, SREBP import into nucleus","type":"exact"},{"name":"sterol depletion response, SREBP nuclear translocation","type":"narrow"},{"name":"sterol depletion response, sterol regulatory element binding protein import into nucleus","type":"exact"},{"name":"sterol depletion response, sterol regulatory element binding protein nuclear translocation","type":"narrow"},{"name":"sterol regulatory element binding protein import into nucleus involved in sterol depletion response","type":"narrow"},{"name":"sterol regulatory element binding protein nuclear translocation","type":"narrow"},{"name":"sterol regulatory element binding protein nuclear translocation involved in sterol depletion response","type":"narrow"}],"termid":"GO:0035105"}


id: PR:O60112
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC15C4.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized Rab geranylgeranyltransferase C15C4.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15C4.03","synonyms":[{"name":"Spom972h-SPBC15C4.03","type":"exact"}],"termid":"PR:O60112"}


id: MONDO:0000093
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Schistosoma mansoni infection, susceptibility (obsolete MONDO:0000093)","termid":"MONDO:0000093","xrefs":{"Monarch":{"xref_id":"0000093"}}}


id: PBO:0075573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPIN2 family pseudogene 1","termid":"PBO:0075573"}


id: GO:0016138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycosides, compounds in which a glycosyl group is substituted into a hydroxyl, thiol or selenol group in another compound.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"},{"relation_name":"is_a","term_name":"glycosyl compound biosynthetic process","termid":"GO:1901659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycoside biosynthetic process","secondary_identifiers":["GO:0016141"],"synonyms":[{"name":"O-glycoside anabolism","type":"exact"},{"name":"O-glycoside biosynthesis","type":"exact"},{"name":"O-glycoside biosynthetic process","type":"exact"},{"name":"O-glycoside formation","type":"exact"},{"name":"O-glycoside synthesis","type":"exact"},{"name":"glycoside anabolism","type":"exact"},{"name":"glycoside biosynthesis","type":"exact"},{"name":"glycoside formation","type":"exact"},{"name":"glycoside synthesis","type":"exact"}],"termid":"GO:0016138"}


id: MONDO:0958299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A round cell sarcoma with EWSR1-non-ETS fusion that is characterized by the presence of EWSR1-NFATC2 gene fusion.","definition_xrefs":["DOID:0081408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"round cell sarcoma with EWSR1-non-ETS fusion","termid":"MONDO:0958160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"round cell sarcoma with EWSR1-NFATC2 gene fusion","secondary_identifiers":["MEDGEN:1791493","UMLS:C5555052"],"termid":"MONDO:0958299","xrefs":{"Monarch":{"xref_id":"0958299"}}}


id: MONDO:0010548
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked cerebellar ataxia","termid":"MONDO:0016612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spinocerebellar ataxia, X-linked 2","secondary_identifiers":["GARD:9978","MESH:C537314","OMIM:302600","DOID:0111830","UMLS:C1844885","MEDGEN:375535"],"synonyms":[{"name":"Scax2","type":"related"},{"name":"cerebellar ataxia with extrapyramidal involvement early-onset","type":"related"},{"name":"cerebellar ataxia with extrapyramidal involvement, early-onset","type":"related"},{"name":"spinocerebellar ataxia X-linked type 2","type":"related"},{"name":"spinocerebellar ataxia, X-linked 2","type":"exact"},{"name":"spinocerebellar ataxia, X-linked type 2","type":"exact"}],"termid":"MONDO:0010548","xrefs":{"Monarch":{"xref_id":"0010548"}}}


id: PR:Q9C0Z0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB24D3.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0Z0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized amino-acid permease PB24D3.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB24D3.02c","synonyms":[{"name":"Spom972h-SPAPB24D3.02c","type":"exact"}],"termid":"PR:Q9C0Z0"}


id: GO:0040010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate of growth of all or part of an organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of growth rate","termid":"GO:0040009"},{"relation_name":"is_a","term_name":"positive regulation of growth","termid":"GO:0045927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of growth rate","synonyms":[{"name":"activation of growth rate","type":"narrow"},{"name":"stimulation of growth rate","type":"narrow"},{"name":"up regulation of growth rate","type":"exact"},{"name":"up-regulation of growth rate","type":"exact"},{"name":"upregulation of growth rate","type":"exact"}],"termid":"GO:0040010"}


id: GO:1990610
data:
  {"annotated_genes":["SJAG_06635"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[65058],"is_not":false,"summary":null,"term":"GO:1990610"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of acetolactate synthase.","definition_xrefs":["PMID:8972574"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"acetolactate synthase regulator activity","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:1990610","terms_by_termid":{"GO:1990610":null}}


id: PBO:0000497
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ORF in compositionally biased region","termid":"PBO:0000497"}


id: GO:0097330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 5-fluoro-2'-deoxyuridine stimulus. 5-fluoro-2'-deoxyuridine is a pyrimidine 2'-deoxyribonucleoside compound having 5-fluorouracil as the nucleobase; it is used to treat hepatic metastases of gastrointestinal adenocarcinomas and for palliation in malignant neoplasms of the liver and gastrointestinal tract.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 5-fluoro-2'-deoxyuridine","termid":"GO:0097330"}


id: GO:1905945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to calcium ion.","definition_xrefs":["PMID:11404397","GOC:TermGenie","GO_REF:0000058","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to calcium ion","termid":"GO:0051592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to calcium ion","synonyms":[{"name":"regulation of response to Ca2+ ion","type":"exact"}],"termid":"GO:1905945"}


id: GO:0060170
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a cilium.","definition_xrefs":["GOC:dph","GOC:rph","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"ciliary membrane","secondary_identifiers":["GO:0020017"],"synonyms":[{"name":"cilial membrane","type":"exact"},{"name":"cilium membrane","type":"exact"},{"name":"flagellar membrane","type":"narrow"},{"name":"flagellum membrane","type":"narrow"}],"termid":"GO:0060170"}


id: PBO:0088936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3H and G-patch domain protein Sqs2","termid":"PBO:0088936"}


id: MOD:01125
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'phos dThymidinyl","termid":"MOD:01125"}


id: MONDO:0100503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurodevelopmental disorder in which the cause of the disease is a mutation in the DPH5 gene, which is characterized by craniofacial dysmorphology, profound neurodevelopmental delay, multisystem abnormalities, and miscarriages.","definition_xrefs":["PMID:35482014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"DPH5-related diphthamide-deficiency syndrome","termid":"MONDO:0100503","xrefs":{"Monarch":{"xref_id":"0100503"}}}


id: GO:0071758
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of the IgW isotype and two identical immunoglobulin light chains, held together by disulfide bonds. An IgW immunoglobulin complex may be embedded in the plasma membrane or present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["ISBN:0781765196","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex","termid":"GO:0019814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"IgW immunoglobulin complex","termid":"GO:0071758"}


id: PBO:0056208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member B3","termid":"PBO:0056208"}


id: PBO:0053697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 898","termid":"PBO:0053697"}


id: PBO:0054435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1831","termid":"PBO:0054435"}


id: PBO:0086623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; similar to the petunia WD repeat protein an11; overexpression causes a cell cycle delay or arrest","termid":"PBO:0086623"}


id: PBO:0113245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein that binds the rDNA replication fork barrier site; required for replication fork blocking and recombinational hotspot activity that results in concerted evolution of the rDNA, termed homogenization; role in recruitment of condensin to the replication fork barrier (RFB), contributing to the faithful segregation of rDNA repeats; proposed role in recovery from low rDNA copy number; related to retroviral integrases","termid":"PBO:0113245"}


id: PBO:0049532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.Z histone pseudogene 3","termid":"PBO:0049532"}


id: PBO:0075083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 133","termid":"PBO:0075083"}


id: GO:1900207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of pronephric nephron tubule development.","definition_xrefs":["GOC:bf","GOC:TermGenie","PMID:9758706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of pronephric nephron tubule development","termid":"GO:1900206"},{"relation_name":"negatively_regulates","term_name":"pronephric nephron tubule development","termid":"GO:0039020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pronephric nephron tubule development","synonyms":[{"name":"down regulation of pronephric nephron tubule development","type":"exact"},{"name":"down-regulation of pronephric nephron tubule development","type":"exact"},{"name":"downregulation of pronephric nephron tubule development","type":"exact"},{"name":"inhibition of pronephric nephron tubule development","type":"narrow"}],"termid":"GO:1900207"}


id: PBO:0000592
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds CDRE 5'-AGCCTC-3'","termid":"PBO:0000592"}


id: MONDO:0015802
data:
  {"annotated_genes":["SJAG_01146","SJAG_04179","SJAG_03698","SJAG_00170","SJAG_00210","SJAG_02218","SJAG_02920","SJAG_00741","SJAG_02282","SJAG_01926","SJAG_01778","SJAG_03418","SJAG_01900","SJAG_00554","SJAG_00800"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030914"},{"annotations":[88817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032823"},{"annotations":[88320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032485"},{"annotations":[88151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957536"},{"annotations":[87963,87964],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013266"},{"annotations":[87407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014842"},{"annotations":[87164,87165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030912"},{"annotations":[86900,86899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030916"},{"annotations":[86897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030917"},{"annotations":[86871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030921"},{"annotations":[86877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030922"},{"annotations":[88133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020847"}]},"cv_name":"mondo","definition":"Autosomal dominant form of non-syndromic intellectual disability.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic intellectual disability","termid":"MONDO:0000509"},{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00170":null,"SJAG_00210":null,"SJAG_00554":null,"SJAG_00741":null,"SJAG_00800":null,"SJAG_01146":null,"SJAG_01778":null,"SJAG_01900":null,"SJAG_01926":null,"SJAG_02218":null,"SJAG_02282":null,"SJAG_02920":null,"SJAG_03418":null,"SJAG_03698":null,"SJAG_04179":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant non-syndromic intellectual disability","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:178469","UMLS:C5680502","DOID:0060307","GARD:12107","MEDGEN:1826082"],"synonyms":[{"name":"autosomal dominant mental retardation","type":"broad"},{"name":"autosomal dominant non-syndromic intellectual disability","type":"exact"},{"name":"autosomal dominant non-syndromic mental retardation","type":"exact"},{"name":"non-syndromic intellectual disability, autosomal dominant","type":"exact"}],"termid":"MONDO:0015802","terms_by_termid":{"MONDO:0013266":null,"MONDO:0014842":null,"MONDO:0020847":null,"MONDO:0030912":null,"MONDO:0030914":null,"MONDO:0030916":null,"MONDO:0030917":null,"MONDO:0030921":null,"MONDO:0030922":null,"MONDO:0032485":null,"MONDO:0032823":null,"MONDO:0957536":null},"xrefs":{"Monarch":{"xref_id":"0015802"}}}


id: GO:0010228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process involved in transforming a meristem that produces vegetative structures, such as leaves, into a meristem that produces reproductive structures, such as a flower or an inflorescence.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"post-embryonic development","termid":"GO:0009791"},{"relation_name":"part_of","term_name":"reproductive structure development","termid":"GO:0048608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vegetative to reproductive phase transition of meristem","synonyms":[{"name":"floral evocation","type":"related"},{"name":"flowering","type":"related"},{"name":"transition from vegetative to reproductive phase","type":"exact"}],"termid":"GO:0010228"}


id: PBO:0091270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial GTPase related protein Gep3","termid":"PBO:0091270"}


id: PBO:0067409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 519, pseudogene","termid":"PBO:0067409"}


id: MONDO:0003552
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adenosquamous gallbladder carcinoma (obsolete MONDO:0003552)","termid":"MONDO:0003552","xrefs":{"Monarch":{"xref_id":"0003552"}}}


id: GO:1903034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to wounding.","definition_xrefs":["GOC:TermGenie","PMID:19164535","GO_REF:0000058","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stress","termid":"GO:0080134"},{"relation_name":"regulates","term_name":"response to wounding","termid":"GO:0009611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to wounding","synonyms":[{"name":"regulation of physiological response to wounding","type":"exact"}],"termid":"GO:1903034"}


id: PATO:0001609
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's being scattered; spread irregularly, and at a distance from each other.","definition_xrefs":["biology.lsu:biology.lsu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sparse","termid":"PATO:0001609"}


id: PBO:0065727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prader-Willi region non-protein coding RNA 4","termid":"PBO:0065727"}


id: PBO:0068388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 207","termid":"PBO:0068388"}


id: MONDO:0015224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of poisoning that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare intoxication (obsolete MONDO:0015224)","secondary_identifiers":["Orphanet:108999"],"synonyms":[{"name":"rare poisoning","type":"exact"}],"termid":"MONDO:0015224","xrefs":{"Monarch":{"xref_id":"0015224"}}}


id: GO:0071820
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an N-box, a DNA motif with the consensus sequence CACNAG that is found in the promoters of genes expressed preferentially at synapses.","definition_xrefs":["GOC:yaf","PMID:11498047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding","termid":"GO:0000978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0000976","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"N-box binding","synonyms":[{"name":"N box binding","type":"exact"},{"name":"N-box promoter binding","type":"exact"}],"termid":"GO:0071820"}


id: GO:0017110
data:
  {"annotated_genes":["SJAG_03676","SJAG_01595","SJAG_03362"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044715"},{"annotations":[115816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043262"},{"annotations":[115820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036384"},{"annotations":[72250,78191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004382"},{"annotations":[72255,78195],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045134"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a nucleoside diphosphate + H2O = a nucleoside monophosphate + phosphate.","definition_xrefs":["EC:3.6.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01595":null,"SJAG_03362":null,"SJAG_03676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"nucleoside diphosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-8851129","Reactome:R-HSA-8851550","MetaCyc:NUCLEOSIDE-DIPHOSPHATASE-RXN","Reactome:R-HSA-8851356","RHEA:36799","Reactome:R-HSA-8850854","Reactome:R-HSA-8851225","Reactome:R-HSA-8851396"],"synonyms":[{"name":"NDPase activity","type":"related"},{"name":"apyrase activity","type":"broad"},{"name":"inosine 5'-diphosphatase","type":"narrow"},{"name":"inosine diphosphatase","type":"narrow"},{"name":"nucleoside 5'-diphosphatase activity","type":"related"},{"name":"nucleoside diphosphatase activity","type":"exact"},{"name":"nucleoside diphosphate phosphohydrolase activity","type":"related"},{"name":"nucleoside-diphosphatase activity","type":"exact"},{"name":"nucleoside-diphosphate phosphohydrolase activity","type":"related"},{"name":"type B nucleoside diphosphatase","type":"narrow"},{"name":"type L nucleoside diphosphatase","type":"narrow"}],"termid":"GO:0017110","terms_by_termid":{"GO:0004382":null,"GO:0036384":null,"GO:0043262":null,"GO:0044715":null,"GO:0045134":null}}


id: GO:0050928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemotaxis","termid":"GO:0050922"},{"relation_name":"is_a","term_name":"regulation of positive chemotaxis","termid":"GO:0050926"},{"relation_name":"negatively_regulates","term_name":"positive chemotaxis","termid":"GO:0050918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of positive chemotaxis","synonyms":[{"name":"down regulation of positive chemotaxis","type":"exact"},{"name":"down-regulation of positive chemotaxis","type":"exact"},{"name":"downregulation of positive chemotaxis","type":"exact"},{"name":"inhibition of positive chemotaxis","type":"narrow"}],"termid":"GO:0050928"}


id: FYECO:0000437
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which the auxin analogue 5-adamantyl-IAA was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ 5IAA","secondary_identifiers":["PMID:37783794"],"synonyms":[{"name":"5-adamantyl-IAA","type":"exact"}],"termid":"FYECO:0000437"}


id: PBO:0000012
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-localization_target","termid":"PBO:0000012"}


id: PBO:0017580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Rcf2","termid":"PBO:0017580"}


id: GO:0050543
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to icosatetraenoic acid, any straight-chain fatty acid with twenty carbon atoms and four double bonds per molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid binding","termid":"GO:0036041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"icosatetraenoic acid binding","synonyms":[{"name":"eicosatetraenoic acid binding","type":"exact"}],"termid":"GO:0050543"}


id: PR:Q09869
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription initiation factor TFIID subunit 9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12075:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID subunit 9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.05c","secondary_identifiers":["UniProtKB:Q09869"],"synonyms":[{"name":"SPAC12G12.05c","type":"related"},{"name":"Spom972h-TAF9","type":"exact"},{"name":"TBP-associated factor 9 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09869"}


id: FYPO:0002416
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells in which cell shape is altered and cell volume is larger than normal. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:vw","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, swollen cells, abnormal cell shape (obsolete FYPO:0002416)","synonyms":[{"name":"inviable microcolonies swollen misshapen cells","type":"related"},{"name":"inviable microcolony, enlarged vegetative cells with abnormal cell shape","type":"related"},{"name":"inviable microcolony, large vegetative cells with abnormal cell shape","type":"related"},{"name":"inviable microcolony, vegetative cells with increased cell size and abnormal cell shape","type":"related"},{"name":"inviable microcolony, vegetative cells with increased cell volume and abnormal cell shape","type":"exact"}],"termid":"FYPO:0002416"}


id: MONDO:0020097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Autosomal recessive form of disease with focal palmoplantar keratoderma as a major feature.","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive disease with focal palmoplantar keratoderma as a major feature (obsolete MONDO:0020097)","secondary_identifiers":["Orphanet:98357"],"synonyms":[{"name":"autosomal recessive disease with focal palmoplantar hyperkeratosis as a major feature","type":"exact"},{"name":"disease with focal palmoplantar keratoderma as a major feature, autosomal recessive","type":"exact"}],"termid":"MONDO:0020097","xrefs":{"Monarch":{"xref_id":"0020097"}}}


id: PBO:0027683
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_number_of_Rad54_foci_during_cellular_response_to_doxorubicin","termid":"PBO:0027683"}


id: GO:0003368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of a cell to the extracellular matrix that contributes to the directed movement of a mesendodermal cell.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-matrix adhesion involved in ameboidal cell migration","termid":"GO:0003366"},{"relation_name":"part_of","term_name":"cell migration involved in mesendoderm migration","termid":"GO:0090134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell-matrix adhesion involved in mesendodermal cell migration","termid":"GO:0003368"}


id: MONDO:0007439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyribose-5-phosphate aldolase deficiency","secondary_identifiers":["UMLS:C1852200","MEDGEN:377617","OMIM:125460","MESH:C565112"],"synonyms":[{"name":"deoxyribose-5-phosphate aldolase deficiency","type":"exact"}],"termid":"MONDO:0007439","xrefs":{"Monarch":{"xref_id":"0007439"}}}


id: PBO:0049410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase 1 soluble subunit beta 1","termid":"PBO:0049410"}


id: PBO:0091852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cis-acting lincRNA Ste11 repressor","termid":"PBO:0091852"}


id: GO:0060949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to a cardiac vascular smooth muscle cell fate and its capacity to differentiate into a cardiac vascular smooth muscle cell.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac cell fate commitment","termid":"GO:0060911"},{"relation_name":"is_a","term_name":"vascular associated smooth muscle cell fate commitment","termid":"GO:0097081"},{"relation_name":"part_of","term_name":"cardiac vascular smooth muscle cell differentiation","termid":"GO:0060947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac vascular smooth muscle cell fate commitment","synonyms":[{"name":"heart vascular smooth muscle cell fate commitment","type":"exact"}],"termid":"GO:0060949"}


id: PBO:0084979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-dependent aldehyde reductase; involved in the detoxification of acetaldehyde, glycolaldehyde, furfural, formaldehyde and propionaldehyde; localizes to the endoplasmic reticulum; member of the classical short-chain dehydrogenase/reductase (SDR) family","termid":"PBO:0084979"}


id: GO:0009550
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plasmodesma that consists of a simple, single channel; found predominantly in young tissue and formed as a function of cell plate formation during cytokinesis.","definition_xrefs":["PMID:15012255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasmodesma","termid":"GO:0009506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"primary plasmodesma","synonyms":[{"name":"simple plasmodesma","type":"exact"}],"termid":"GO:0009550"}


id: FYPO:0002051
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is swollen, elongated, has no septum, and contains more than one nucleus. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swollen elongated cell","termid":"FYPO:0001429"},{"relation_name":"is_a","term_name":"elongated multinucleate aseptate vegetative cell","termid":"FYPO:0002049"},{"relation_name":"is_a","term_name":"swollen multinucleate vegetative cell","termid":"FYPO:0004257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0000005"],"is_obsolete":false,"name":"swollen elongated multinucleate aseptate vegetative cell","synonyms":[{"name":"elongated multinucleate aseptate vegetative cell with increased cell volume","type":"exact"},{"name":"enlarged elongated multinucleate aseptate vegetative cell","type":"related"},{"name":"large elongated multinucleate aseptate vegetative cell","type":"related"},{"name":"swollen elongated multinucleate aseptate cell during vegetative growth","type":"exact"},{"name":"swollen elongated multinucleate aseptate vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002051"}


id: PBO:0001130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain protein Swi6","termid":"PBO:0001130"}


id: PBO:0002034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA U17","termid":"PBO:0002034"}


id: MONDO:0018822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Global developmental delay-visual anomalies-progressive cerebellar atrophy-truncal hypotonia syndrome is a rare, genetic, neurological disorder characterized by mild to severe developmental delay and speech impairment, truncal hypotonia, abnormalities of vision (including cortical visual impairment and abnormal visual-evoked potentials), progressive brain atrophy mainly affecting the cerebellum, and shortened or atrophic corpus callosum. Other clinical findings may include increased muscle tone in the extremities, dystonic posturing, hyporeflexia, scoliosis, postnatal microcephaly and variable facial dysmorphism (e.g. deep-set eyes, gingival hyperplasia, short philtrum and retrognathia).","definition_xrefs":["Orphanet:480898"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0020022","MONDO:0005328","MONDO:0002320"],"is_obsolete":false,"name":"global developmental delay-visual anomalies-progressive cerebellar atrophy-truncal hypotonia syndrome","secondary_identifiers":["GARD:17871","UMLS:C5567522","MEDGEN:1798945"],"termid":"MONDO:0018822","xrefs":{"Monarch":{"xref_id":"0018822"}}}


id: GO:0140366
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A non-stoichiometric protein complex formed by several galectins crosslinking glycosylated ligands to form a dynamic lattice. The galectin lattice modulates receptor kinase signaling and the functionality of membrane receptors, by regulating the diffusion, compartmentalization and endocytosis of plasma membrane glycoproteins and glycolipids.","definition_xrefs":["PMID:28893908","PMID:19021578","PMID:30951647","PMID:26092931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein complex involved in cell-cell adhesion","termid":"GO:0098635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"galectin lattice","termid":"GO:0140366"}


id: GO:0018673
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-aminobenzoyl-CoA + 2 NADPH + 2 H+ + O2 = 2-amino-5-oxocyclohex-1-enecarboxyl-CoA + H2O + 2 NADP+.","definition_xrefs":["EC:1.14.13.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"anthraniloyl-CoA monooxygenase activity","secondary_identifiers":["MetaCyc:ANTHRANILOYL-COA-MONOOXYGENASE-RXN","UM-BBD_reactionID:r0568"],"synonyms":[{"name":"2-aminobenzoyl-CoA monooxygenase/reductase activity","type":"related"},{"name":"2-aminobenzoyl-CoA,NAD(P)H:oxygen oxidoreductase (de-aromatizing)","type":"related"},{"name":"anthraniloyl coenzyme A reductase activity","type":"related"}],"termid":"GO:0018673"}


id: PBO:0051258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-44 (pseudogene)","termid":"PBO:0051258"}


id: PBO:0071677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 9","termid":"PBO:0071677"}


id: GO:1901624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lymphocyte chemotaxis.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte chemotaxis","termid":"GO:0002689"},{"relation_name":"is_a","term_name":"regulation of lymphocyte chemotaxis","termid":"GO:1901623"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte migration","termid":"GO:2000402"},{"relation_name":"negatively_regulates","term_name":"lymphocyte chemotaxis","termid":"GO:0048247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lymphocyte chemotaxis","synonyms":[{"name":"down regulation of lymphocyte chemotaxis","type":"exact"},{"name":"down-regulation of lymphocyte chemotaxis","type":"exact"},{"name":"downregulation of lymphocyte chemotaxis","type":"exact"},{"name":"inhibition of lymphocyte chemotaxis","type":"narrow"}],"termid":"GO:1901624"}


id: MONDO:0032614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"epidermodysplasia verruciformis, susceptibility to","termid":"MONDO:0100043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermodysplasia verruciformis, susceptibility to, 2","secondary_identifiers":["MEDGEN:1648344","OMIM:618231","UMLS:C4722258"],"synonyms":[{"name":"EPIDERMODYSPLASIA VERRUCIFORMIS, SUSCEPTIBILITY TO, 2","type":"related"},{"name":"EV2","type":"related"},{"name":"epidermodysplasia verruciformis 2","type":"exact"}],"termid":"MONDO:0032614","xrefs":{"Monarch":{"xref_id":"0032614"}}}


id: FYPO:0006090
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione hydrolase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased peptidase activity","termid":"FYPO:0000667"},{"relation_name":"is_a","term_name":"abnormal glutathione hydrolase activity","termid":"FYPO:0006089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"increased glutathione hydrolase activity","termid":"FYPO:0006090"}


id: PBO:0074399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 8","termid":"PBO:0074399"}


id: GO:0097509
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"DNA N-glycosylase activity acting on deaminated guanine where the resulting base (oxanine) is generated by NO- or HNO2-induced nitrosative deamination.","definition_xrefs":["GOC:al","PMID:18789404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deaminated base DNA N-glycosylase activity","termid":"GO:0097506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016798","GO:0140097"],"is_obsolete":false,"name":"oxanine DNA N-glycosylase activity","synonyms":[{"name":"oxanine-DNA glycosylase activity","type":"related"}],"termid":"GO:0097509"}


id: SO:0000169
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequence in eukaryotic DNA to which RNA polymerase I binds, to begin transcription.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eukaryotic_promoter","termid":"SO:0002221"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNApol_I_promoter","synonyms":[{"name":"RNA polymerase A promoter","type":"exact"},{"name":"RNApol I promoter","type":"exact"},{"name":"pol I promoter","type":"exact"},{"name":"polymerase I promoter","type":"exact"}],"termid":"SO:0000169"}


id: PBO:0005168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cargo receptor for soluble proteins (predicted)","termid":"PBO:0005168"}


id: MONDO:0100082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Noonan syndrome with multiple lentigines in which the cause of the disease is a heterozygous mutation in the PTPN11 gene on chromosome 12q24.","definition_xrefs":["PMID:12058348","OMIM:151100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Noonan syndrome with multiple lentigines","termid":"MONDO:0007893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0000426"],"is_obsolete":false,"name":"LEOPARD syndrome 1","secondary_identifiers":["MEDGEN:1631694","UMLS:C4551484","DOID:0080548"],"synonyms":[{"name":"LEOPARD syndrome 1","type":"exact"},{"name":"LEOPARD syndrome type 1","type":"exact"},{"name":"LPRD1","type":"exact"},{"name":"lentiginosis, cardiomyopathic","type":"exact"},{"name":"multiple lentigines syndrome","type":"exact"}],"termid":"MONDO:0100082","xrefs":{"Monarch":{"xref_id":"0100082"}}}


id: PBO:0043935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cartilage associated protein","termid":"PBO:0043935"}


id: GO:0021699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the cerebellar cortex to attain its fully functional state. The cerebellar cortex is a thin mantle of gray matter that covers the surface of each cerebral hemisphere. It has a characteristic morphology with convolutions (gyri) and crevices (sulci) that have specific functions. Six layers of nerve cells and the nerve pathways that connect them comprise the cerebellar cortex. Together, these regions are responsible for the processes of conscious thought, perception, emotion and memory as well as advanced motor function.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:dph","ISBN:0838580343","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"cerebellum maturation","termid":"GO:0021590"},{"relation_name":"part_of","term_name":"cerebellar cortex development","termid":"GO:0021695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar cortex maturation","termid":"GO:0021699"}


id: PBO:0080835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ybeY metalloendoribonuclease","termid":"PBO:0080835"}


id: MONDO:1012876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Parkinson disease that occurs in rhesus monkeys due to a mutation in the PINK1 gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Parkinson disease, non-human animal","termid":"MONDO:1012984"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Parkinson disease, PINK1-related, rhesus monkey","secondary_identifiers":["OMIA:002361-9544"],"termid":"MONDO:1012876","xrefs":{"Monarch":{"xref_id":"1012876"}}}


id: MONDO:0006806
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the pars plana.","definition_xrefs":["NCIT:C35110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uveitis","termid":"MONDO:0020283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"intermediate uveitis","secondary_identifiers":["GARD:21065","EFO:1000986","MedDRA:10022557","DOID:12732","HP:0012124","SCTID:314429009","Orphanet:279914","MESH:D015867","MEDGEN:22596","UMLS:C0042166"],"synonyms":[{"name":"IU","type":"exact"},{"name":"chronic cyclitis","type":"exact"},{"name":"intermediate uveitis","type":"exact"},{"name":"intermediate uveitis (disease)","type":"exact"},{"name":"pars planitis","type":"narrow"},{"name":"peripheral uveoretinitis","type":"exact"}],"termid":"MONDO:0006806","xrefs":{"Monarch":{"xref_id":"0006806"}}}


id: PBO:0076228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPT16 homolog, facilitates chromatin remodeling subunit pseudogene 1","termid":"PBO:0076228"}


id: PBO:0039867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP27P1-BPTFP1-KPNA2P3 readthrough, transcribed pseudogene","termid":"PBO:0039867"}


id: PBO:0001570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-22 sterol desaturase Erg5","termid":"PBO:0001570"}


id: PBO:0108985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 9","termid":"PBO:0108985"}


id: GO:0052191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of phagocytosis, the engulfing by phagocytes of external particulate material, in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of host phagocytosis (obsolete GO:0052191)","synonyms":[{"name":"activation by symbiont of host phagocytosis","type":"narrow"},{"name":"stimulation by symbiont of host phagocytosis","type":"narrow"},{"name":"up regulation by symbiont of host phagocytosis","type":"exact"},{"name":"up-regulation by symbiont of host phagocytosis","type":"exact"},{"name":"upregulation by symbiont of host phagocytosis","type":"exact"}],"termid":"GO:0052191"}


id: GO:0102470
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4,4',6-tetrahydroxydibenzoylmethane + UDP-alpha-D-glucose = 6C-glucosyl-2-hydroxynaringenin + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 6C-naringenin dibenzoylmethane tautomer glucosyltransferase activity (obsolete GO:0102470)","termid":"GO:0102470"}


id: GO:1901601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of strigolactone.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid biosynthetic process","termid":"GO:0016106"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"},{"relation_name":"is_a","term_name":"strigolactone metabolic process","termid":"GO:1901600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"strigolactone biosynthetic process","synonyms":[{"name":"strigolactone anabolism","type":"exact"},{"name":"strigolactone biosynthesis","type":"exact"},{"name":"strigolactone formation","type":"exact"},{"name":"strigolactone synthesis","type":"exact"}],"termid":"GO:1901601"}


id: PBO:0030263
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_erythromycin","termid":"PBO:0030263"}


id: PBO:0051012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor 2","termid":"PBO:0051012"}


id: PBO:0067626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 798, pseudogene","termid":"PBO:0067626"}


id: PBO:0085970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; potentially phosphorylated by Cdc28p; YER158C has a paralog, AFR1, that arose from the whole genome duplication","termid":"PBO:0085970"}


id: GO:0071797
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ubiquitin ligase complex that catalyzes linear head-to-tail polyubiquitin conjugation on its targets. In human the complex consists of RBCK1, RNF31 and SHARPIN, and has an MW of approximately 600 kDa, suggesting a heteromultimeric assembly of its subunits. LUBAC stands for Linear Ubiquitin Chain Assembly Complex.","definition_xrefs":["PMID:21455180","GOC:sp","PMID:17006537","PMID:19136968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin ligase complex","termid":"GO:0000151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"LUBAC complex","termid":"GO:0071797"}


id: PBO:0039506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 26 pseudogene 4","termid":"PBO:0039506"}


id: PBO:0001067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk9 (predicted)","termid":"PBO:0001067"}


id: GO:0033159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the vectorial transfer of a protein from the cytoplasm into the nucleus, across the nuclear membrane.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of protein import into nucleus, translocation (obsolete GO:0033159)","synonyms":[{"name":"negative regulation of protein import into cell nucleus, translocation","type":"exact"}],"termid":"GO:0033159"}


id: GO:0043946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of enzyme activity in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of catalytic activity in other organism involved in symbiotic interaction (obsolete GO:0043946)","synonyms":[{"name":"activation of enzyme activity in other organism","type":"narrow"},{"name":"activation of enzyme activity in other organism during symbiotic interaction","type":"narrow"},{"name":"positive regulation of catalytic activity in other organism during symbiotic interaction","type":"related"},{"name":"up regulation of enzyme activity in other organism during symbiotic interaction","type":"related"},{"name":"up-regulation of enzyme activity in other organism during symbiotic interaction","type":"related"},{"name":"upregulation of enzyme activity in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0043946"}


id: PBO:0112005
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Repeat Specific Silencing factor","termid":"PBO:0112005"}


id: MONDO:0000735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete oculodentodigital dysplasia (obsolete MONDO:0000735)","termid":"MONDO:0000735","xrefs":{"Monarch":{"xref_id":"0000735"}}}


id: GO:0046494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving rhizobactin 1021, (E)-4-((3-(acetylhydroxyamino)propyl)-amino)-2-hydroxy-(2-(2-(3-(hydroxy(1-oxo-2-decenyl)amino)propyl)amino)-2-oxoethyl)-4-oxobutanoic acid, a siderophore produced by Sinorhizobium meliloti.","definition_xrefs":["PMID:11274118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore metabolic process","termid":"GO:0009237"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"tertiary alcohol metabolic process","termid":"GO:1902644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"rhizobactin 1021 metabolic process","synonyms":[{"name":"rhizobactin 1021 metabolism","type":"exact"}],"termid":"GO:0046494"}


id: PBO:0034220
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-drains","termid":"PBO:0034220"}


id: GO:1905479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of glutamate-ammonia ligase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:10377385"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of glutamate-ammonia ligase activity (obsolete GO:1905479)","synonyms":[{"name":"down regulation of L-glutamate:ammonia ligase (ADP-forming)","type":"exact"},{"name":"down regulation of L-glutamine synthetase activity","type":"exact"},{"name":"down regulation of glutamate-ammonia ligase activity","type":"exact"},{"name":"down regulation of glutamine synthetase activity","type":"exact"},{"name":"down regulation of glutamylhydroxamic synthetase activity","type":"exact"},{"name":"down-regulation of L-glutamate:ammonia ligase (ADP-forming)","type":"exact"},{"name":"down-regulation of L-glutamine synthetase activity","type":"exact"},{"name":"down-regulation of glutamate-ammonia ligase activity","type":"exact"},{"name":"down-regulation of glutamine synthetase activity","type":"exact"},{"name":"down-regulation of glutamylhydroxamic synthetase activity","type":"exact"},{"name":"downregulation of L-glutamate:ammonia ligase (ADP-forming)","type":"exact"},{"name":"downregulation of L-glutamine synthetase activity","type":"exact"},{"name":"downregulation of glutamate-ammonia ligase activity","type":"exact"},{"name":"downregulation of glutamine synthetase activity","type":"exact"},{"name":"downregulation of glutamylhydroxamic synthetase activity","type":"exact"},{"name":"inhibition of L-glutamate:ammonia ligase (ADP-forming)","type":"narrow"},{"name":"inhibition of L-glutamine synthetase activity","type":"narrow"},{"name":"inhibition of glutamate-ammonia ligase activity","type":"narrow"},{"name":"inhibition of glutamine synthetase activity","type":"narrow"},{"name":"inhibition of glutamylhydroxamic synthetase activity","type":"narrow"},{"name":"negative regulation of L-glutamate:ammonia ligase (ADP-forming)","type":"exact"},{"name":"negative regulation of L-glutamine synthetase activity","type":"exact"},{"name":"negative regulation of glutamine synthetase activity","type":"exact"},{"name":"negative regulation of glutamylhydroxamic synthetase activity","type":"exact"}],"termid":"GO:1905479"}


id: PBO:0000708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3h (p40)","termid":"PBO:0000708"}


id: MONDO:0000704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microscopic colitis characterized by the accumulation of lymphocytes in the colonic epithelium and lamina propria. Patients present with chronic watery diarrhea. Colonoscopy reveals normal colonic mucosa. The diagnosis is made with the microscopic examination of the colonic biopsy samples.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microscopic colitis","termid":"MONDO:0000702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"lymphocytic colitis","secondary_identifiers":["icd11.foundation:1629251056","MEDGEN:98006","UMLS:C0400822","MESH:D046730","NCIT:C27147","EFO:1001294","SCTID:31437008","ICD9:558.9","DOID:0060184","ICD10CM:K52.832","MedDRA:10025268","Orphanet:65279"],"termid":"MONDO:0000704","xrefs":{"Monarch":{"xref_id":"0000704"}}}


id: PBO:0091549
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wee1-50 Overexpression Suppressor","termid":"PBO:0091549"}


id: PBO:0063300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PC-esterase domain containing 1A","termid":"PBO:0063300"}


id: GO:1901704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-glutamine.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamine biosynthetic process","termid":"GO:0006542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-glutamine biosynthetic process","synonyms":[{"name":"L-glutamine anabolism","type":"exact"},{"name":"L-glutamine biosynthesis","type":"exact"},{"name":"L-glutamine formation","type":"exact"},{"name":"L-glutamine synthesis","type":"exact"}],"termid":"GO:1901704"}


id: GO:0018958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a phenol, any compound containing one or more hydroxyl groups directly attached to an aromatic carbon ring.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenol-containing compound metabolic process","secondary_identifiers":["UM-BBD_pathwayID:phe"],"synonyms":[{"name":"carbolic acid metabolic process","type":"exact"},{"name":"carbolic acid metabolism","type":"exact"},{"name":"hydroxybenzene metabolic process","type":"exact"},{"name":"hydroxybenzene metabolism","type":"exact"},{"name":"phenol-containing compound metabolism","type":"exact"}],"termid":"GO:0018958"}


id: PBO:0047609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"four and a half LIM domains 5","termid":"PBO:0047609"}


id: GO:0019410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The metabolic process in which carbon monoxide (CO) is oxidized to carbon dioxide (CO2) to generate energy. Conservation of energy in this process likely uses sodium ion gradients for ATP synthesis and is coupled to quantitative sulfide methylation.","definition_xrefs":["PMID:18024677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic respiration","termid":"GO:0009060"},{"relation_name":"is_a","term_name":"energy derivation by oxidation of reduced inorganic compounds","termid":"GO:0015975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"aerobic respiration, using carbon monoxide as electron donor","termid":"GO:0019410"}


id: SO:0002203
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A nucleotide site from which replication initiates.","definition_xrefs":["NCBI:cf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"origin_of_replication","termid":"SO:0000296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication_start_site","synonyms":[{"name":"INSDC_feature:misc_feature","type":"broad"},{"name":"INSDC_note:replication_start_site","type":"exact"},{"name":"replication start site","type":"exact"}],"termid":"SO:0002203"}


id: MONDO:0013966
data:
  {"annotated_genes":["SJAG_04781","SJAG_04901"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89006,89007],"is_not":false,"summary":null,"term":"MONDO:0013966"}]},"cv_name":"mondo","definition":"Any catecholaminergic polymorphic ventricular tachycardia in which the cause of the disease is a mutation in the CALM1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catecholaminergic polymorphic ventricular tachycardia","termid":"MONDO:0017990"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04781":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"catecholaminergic polymorphic ventricular tachycardia 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10CM:I47.2","GARD:15880","DOID:0060678","MEDGEN:766961","OMIM:614916","UMLS:C3554047"],"synonyms":[{"name":"CALM1 catecholaminergic polymorphic ventricular tachycardia","type":"exact"},{"name":"CPVT4","type":"related"},{"name":"CVPT4","type":"exact"},{"name":"catecholaminergic polymorphic ventricular tachycardia 4","type":"exact"},{"name":"catecholaminergic polymorphic ventricular tachycardia caused by mutation in CALM1","type":"exact"},{"name":"catecholaminergic polymorphic ventricular tachycardia type 4","type":"exact"},{"name":"ventricular tachycardia, catecholaminergic polymorphic, 4","type":"related"},{"name":"ventricular tachycardia, catecholaminergic polymorphic, type 4","type":"exact"}],"termid":"MONDO:0013966","terms_by_termid":{"MONDO:0013966":null},"xrefs":{"Monarch":{"xref_id":"0013966"}}}


id: SO:0001541
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that decreases the level of mature, spliced and processed RNA with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"level_of_transcript_variant","termid":"SO:0001540"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased_transcript_level_variant","synonyms":[{"name":"decreased transcript level","type":"exact"}],"termid":"SO:0001541"}


id: PBO:0087900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor; involved in regulation of cell cycle progression from G1 to S phase, forms a complex with Swi6p that binds to MluI cell cycle box regulatory element in promoters of DNA synthesis genes","termid":"PBO:0087900"}


id: PBO:0049430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 7","termid":"PBO:0049430"}


id: MONDO:0011741
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Hirschsprung disease, susceptibility to","termid":"MONDO:0100179"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hirschsprung disease, susceptibility to, 6","secondary_identifiers":["OMIM:606874","UMLS:C1969837","MEDGEN:369600"],"synonyms":[{"name":"HSCR6","type":"exact"},{"name":"Hirschsprung disease, susceptibility to, 6","type":"exact"}],"termid":"MONDO:0011741","xrefs":{"Monarch":{"xref_id":"0011741"}}}


id: PBO:0017026
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial Microtubule Binder","termid":"PBO:0017026"}


id: MONDO:0800347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiomyopathy, familial hypertrophic, 23, with or without ventricular noncompaction","secondary_identifiers":["UMLS:C4225649","MEDGEN:897129"],"synonyms":[{"name":"CMH23","type":"exact"}],"termid":"MONDO:0800347","xrefs":{"Monarch":{"xref_id":"0800347"}}}


id: MONDO:0958332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neuromuscular disease","termid":"MONDO:0100546"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuromuscular disorder, congenital, with dysmorphic facies","secondary_identifiers":["MEDGEN:1857169","UMLS:C5935643","OMIM:620775"],"termid":"MONDO:0958332","xrefs":{"Monarch":{"xref_id":"0958332"}}}


id: GO:0018030
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a myristoyl group to the N6 nitrogen atom on a lysine residue of a peptide or protein molecule.","definition_xrefs":["PMID:1402651","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myristoyltransferase activity","termid":"GO:0019107"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0140096","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"peptidyl-lysine N6-myristoyltransferase activity","termid":"GO:0018030"}


id: MONDO:0000227
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spotted fever","termid":"MONDO:0001195"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"African tick-bite fever","secondary_identifiers":["MEDGEN:728968","UMLS:C1320317","DOID:0050035","SCTID:415561000"],"synonyms":[{"name":"Rickettsia africae spotted fever","type":"related"},{"name":"South African tick-bite fever","type":"related"}],"termid":"MONDO:0000227","xrefs":{"Monarch":{"xref_id":"0000227"}}}


id: GO:0102203
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + brassicasterol = UDP(3-) + 3-O-beta-D-glucosyl-brassicasterol + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete brassicasterol glucosyltransferase activity (obsolete GO:0102203)","termid":"GO:0102203"}


id: MONDO:0014971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"amelogenesis imperfecta type 2","termid":"MONDO:0015048"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta, hypomaturation type, IIa6","secondary_identifiers":["UMLS:C4310665","DOID:0080960","GARD:16211","OMIM:617217","MEDGEN:934632"],"synonyms":[{"name":"AI2A6","type":"exact"},{"name":"amelogenesis imperfecta, hypomaturation type, IIa6","type":"exact"},{"name":"amelogenesis imperfecta, hypomaturation type, IIa6; AI2A6","type":"exact"}],"termid":"MONDO:0014971","xrefs":{"Monarch":{"xref_id":"0014971"}}}


id: PBO:0059144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megakaryocyte and platelet inhibitory receptor G6b","termid":"PBO:0059144"}


id: PBO:0087920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor TFIIB; a general transcription factor required for transcription initiation and start site selection by RNA polymerase II","termid":"PBO:0087920"}


id: MONDO:0004429
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma (disease) that involves the zone of skin.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin cancer","termid":"MONDO:0002898"},{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"},{"relation_name":"is_a","term_name":"malignant tumor of meninges","termid":"MONDO:0021322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"skin meningioma","secondary_identifiers":["DOID:8006","MEDGEN:698541","UMLS:C1275260"],"synonyms":[{"name":"meningioma (disease) of zone of skin","type":"exact"},{"name":"primary meningioma of the skin","type":"narrow"},{"name":"zone of skin meningioma (disease)","type":"exact"}],"termid":"MONDO:0004429","xrefs":{"Monarch":{"xref_id":"0004429"}}}


id: FYECO:0000246
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose, salts, water and with proline as the nitrogen source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, proline nitrogen source","termid":"FYECO:0000246"}


id: PBO:0013476
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichostatin A suppresses accumulation of septated cells, but does not restore wild-type checkpoint function, in chk1delta mutant","termid":"PBO:0013476"}


id: PBO:0066788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 87","termid":"PBO:0066788"}


id: PBO:0052007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JDP2 antisense RNA 1","termid":"PBO:0052007"}


id: PBO:0088521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S5","termid":"PBO:0088521"}


id: PBO:0075521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E2","termid":"PBO:0075521"}


id: GO:0044684
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydromethanopterin + NADPH = 5,6,7,8-tetrahydromethanopterin + NADP.","definition_xrefs":["PMID:15028691","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"dihydromethanopterin reductase activity","secondary_identifiers":["EC:1.5.99.15","RHEA:42804"],"termid":"GO:0044684"}


id: PBO:0077107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 10B","termid":"PBO:0077107"}


id: MONDO:0011760
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Scheie syndrome is the mildest form of mucopolysaccharidosis type 1 (MPS1), a rare lysosomal storage disease, characterized by skeletal deformities and a delay in motor development.","definition_xrefs":["Orphanet:93474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucopolysaccharidosis type 1","termid":"MONDO:0001586"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"lysosomal storage disease with skeletal involvement","termid":"MONDO:0800088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0002561","MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"Scheie syndrome","secondary_identifiers":["GARD:12561","NANDO:2201169","OMIM:607016","NCIT:C61265","DOID:0060222","MEDGEN:6453","SCTID:73123008","NANDO:1200095","UMLS:C0026708"],"synonyms":[{"name":"MPS I S","type":"exact"},{"name":"MPS V","type":"related"},{"name":"MPS V, formerly","type":"related"},{"name":"MPS1-S","type":"related"},{"name":"MPS1S","type":"exact"},{"name":"MPS5, formerly","type":"related"},{"name":"MPSIS","type":"exact"},{"name":"Scheie syndrome","type":"exact"},{"name":"mucopolysaccharidosis Is","type":"related"},{"name":"mucopolysaccharidosis type 1S","type":"exact"},{"name":"mucopolysaccharidosis type IS","type":"exact"},{"name":"mucopolysaccharidosis type V","type":"exact"},{"name":"mucopolysaccharidosis type V, formerly","type":"related"}],"termid":"MONDO:0011760","xrefs":{"Monarch":{"xref_id":"0011760"}}}


id: PBO:0044698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 3 pseudogene 1","termid":"PBO:0044698"}


id: MONDO:0010211
data:
  {"annotated_genes":["SJAG_01049","SJAG_01887"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88463,88464],"is_not":false,"summary":null,"term":"MONDO:0010211"}]},"cv_name":"mondo","definition":"An autosomal recessive inherited disorder caused by mutations in the XPC gene. This disease is characterized by increased sensitivity to sunlight with the development of carcinomas at an early age and is caused by a defect in nucleotide excision repair.","definition_xrefs":["NCIT:C114770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xeroderma pigmentosum","termid":"MONDO:0019600"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01049":null,"SJAG_01887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066","MONDO:0021190"],"is_obsolete":false,"name":"xeroderma pigmentosum group C","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110844","MEDGEN:416702","MESH:C567886","OMIM:278720","SCTID:25784009","GARD:5626","UMLS:C2752147","Orphanet:276255"],"synonyms":[{"name":"XP group C","type":"exact"},{"name":"XP, Group C","type":"related"},{"name":"XP-C","type":"exact"},{"name":"XP3","type":"exact"},{"name":"XPC","type":"exact"},{"name":"XPCC","type":"exact"},{"name":"xeroderma pigmentosum 3","type":"related"},{"name":"xeroderma pigmentosum III","type":"exact"},{"name":"xeroderma pigmentosum group C","type":"exact"},{"name":"xeroderma pigmentosum group type C","type":"exact"},{"name":"xeroderma pigmentosum, complementation group C","type":"related"},{"name":"xeroderma pigmentosum, complementation group type C","type":"exact"},{"name":"xeroderma pigmentosum, group C","type":"exact"},{"name":"xeroderma pigmentosum, type 3","type":"related"}],"termid":"MONDO:0010211","terms_by_termid":{"MONDO:0010211":null},"xrefs":{"Monarch":{"xref_id":"0010211"}}}


id: PBO:0058824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8054","termid":"PBO:0058824"}


id: GO:0009162
data:
  {"annotated_genes":["SJAG_04487","SJAG_04627","SJAG_01055","SJAG_01974","SJAG_03771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70493,77518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009159"},{"annotations":[81214,71649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[71648,81237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a deoxyribonucleoside monophosphate, a compound consisting of a nucleobase linked to a deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate metabolic process","termid":"GO:0009123"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01055":null,"SJAG_01974":null,"SJAG_03771":null,"SJAG_04487":null,"SJAG_04627":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"deoxyribonucleoside monophosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000117":null},"synonyms":[{"name":"deoxyribonucleoside monophosphate metabolism","type":"exact"}],"termid":"GO:0009162","terms_by_termid":{"GO:0006226":null,"GO:0006231":null,"GO:0009159":null}}


id: PBO:0057530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR646 host gene","termid":"PBO:0057530"}


id: FYPO:0004317
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the post-anaphase array of microtubules is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"},{"relation_name":"is_a","term_name":"abnormal post-anaphase array","termid":"FYPO:0004316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0001985","FYPO:0000054","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal post-anaphase array morphology","synonyms":[{"name":"abnormal microtubule cytoskeleton morphology during mitotic cell cycle","type":"related"},{"name":"abnormal post-anaphase array morphology during vegetative growth","type":"exact"},{"name":"abnormal post-anaphase microtubule array morphology","type":"exact"}],"termid":"FYPO:0004317"}


id: GO:1901033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to reactive oxygen species.","definition_xrefs":["GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to reactive oxygen species","termid":"GO:1901031"},{"relation_name":"is_a","term_name":"positive regulation of response to oxidative stress","termid":"GO:1902884"},{"relation_name":"positively_regulates","term_name":"response to reactive oxygen species","termid":"GO:0000302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to reactive oxygen species","synonyms":[{"name":"activation of response to AOS","type":"exact"},{"name":"activation of response to ROI","type":"exact"},{"name":"activation of response to ROS","type":"exact"},{"name":"activation of response to active oxygen species","type":"exact"},{"name":"activation of response to reactive oxidative species","type":"exact"},{"name":"activation of response to reactive oxygen intermediate","type":"exact"},{"name":"activation of response to reactive oxygen species","type":"narrow"},{"name":"positive regulation of response to AOS","type":"exact"},{"name":"positive regulation of response to ROI","type":"exact"},{"name":"positive regulation of response to ROS","type":"exact"},{"name":"positive regulation of response to active oxygen species","type":"exact"},{"name":"positive regulation of response to reactive oxidative species","type":"exact"},{"name":"positive regulation of response to reactive oxygen intermediate","type":"exact"},{"name":"up regulation of response to AOS","type":"exact"},{"name":"up regulation of response to ROI","type":"exact"},{"name":"up regulation of response to ROS","type":"exact"},{"name":"up regulation of response to active oxygen species","type":"exact"},{"name":"up regulation of response to reactive oxidative species","type":"exact"},{"name":"up regulation of response to reactive oxygen intermediate","type":"exact"},{"name":"up regulation of response to reactive oxygen species","type":"exact"},{"name":"up-regulation of response to AOS","type":"exact"},{"name":"up-regulation of response to ROI","type":"exact"},{"name":"up-regulation of response to ROS","type":"exact"},{"name":"up-regulation of response to active oxygen species","type":"exact"},{"name":"up-regulation of response to reactive oxidative species","type":"exact"},{"name":"up-regulation of response to reactive oxygen intermediate","type":"exact"},{"name":"up-regulation of response to reactive oxygen species","type":"exact"},{"name":"upregulation of response to AOS","type":"exact"},{"name":"upregulation of response to ROI","type":"exact"},{"name":"upregulation of response to ROS","type":"exact"},{"name":"upregulation of response to active oxygen species","type":"exact"},{"name":"upregulation of response to reactive oxidative species","type":"exact"},{"name":"upregulation of response to reactive oxygen intermediate","type":"exact"},{"name":"upregulation of response to reactive oxygen species","type":"exact"}],"termid":"GO:1901033"}


id: PR:O59737
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gyp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein gyp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.01","synonyms":[{"name":"GAP for ypt1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gyp1","type":"exact"}],"termid":"PR:O59737"}


id: MONDO:0007874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Langer-Giedon syndrome, also known as trichorhinophalangeal syndrome type 2, is a very rare, genetic, multiple congenital anomaly disorder characterized by bone abnormalities, distinctive facial features, multiple exostoses, and intellectual disability.","definition_xrefs":["Orphanet:502"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 8","termid":"MONDO:0016907"},{"relation_name":"is_a","term_name":"trichorhinophalangeal syndrome","termid":"MONDO:0017951"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005093"],"is_obsolete":false,"name":"trichorhinophalangeal syndrome type II","secondary_identifiers":["SCTID:41069008","DOID:4998","ICD9:759.89","MedDRA:10050638","MEDGEN:6009","NCIT:C75118","MESH:D015826","OMIM:150230","NORD:1788","GARD:7801","UMLS:C0023003","icd11.foundation:315453775"],"synonyms":[{"name":"Giedion-Langer syndrome","type":"related"},{"name":"Langer Giedion syndrome","type":"related"},{"name":"Langer-Giedion syndrome","type":"exact"},{"name":"TRPS 2","type":"related"},{"name":"TRPS2","type":"related"},{"name":"chromosome 8Q24.1 deletion syndrome","type":"related"},{"name":"deletion 8q24.1","type":"exact"},{"name":"monosomy 8q24.1","type":"exact"},{"name":"trichorhinophalangeal dysplasia type II","type":"exact"},{"name":"trichorhinophalangeal syndrome type 2","type":"exact"},{"name":"trichorhinophalangeal syndrome, type 2","type":"related"},{"name":"trichorhinophalangeal syndrome, type II","type":"related"}],"termid":"MONDO:0007874","xrefs":{"Monarch":{"xref_id":"0007874"}}}


id: PBO:0017906
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sSuppressor for K-252a Sensitivity","termid":"PBO:0017906"}


id: PBO:0069868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1155, pseudogene","termid":"PBO:0069868"}


id: MONDO:0013042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"atypical hemolytic uremic syndrome with complement gene abnormality","termid":"MONDO:0035290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"atypical hemolytic-uremic syndrome with B factor anomaly","secondary_identifiers":["GARD:18554","UMLS:C2752038","MEDGEN:416691","Orphanet:93578","OMIM:612924"],"synonyms":[{"name":"AHUS4","type":"related"},{"name":"D-HUS with B factor anomaly","type":"exact"},{"name":"aHUS with B factor anomaly","type":"exact"},{"name":"aHUS, susceptibility to, 4","type":"related"},{"name":"aHUS4","type":"related"},{"name":"atypical HUS with B factor anomaly","type":"exact"},{"name":"hemolytic uremic syndrome, atypical, susceptibility to, 4","type":"related"},{"name":"hemolytic uremic syndrome, atypical, susceptibility to, type 4","type":"exact"},{"name":"hemolytic-uremic syndrome without diarrhea with B factor anomaly","type":"exact"},{"name":"hemolytic-uremic syndrome without diarrhoea with B factor anomaly","type":"exact"},{"name":"susceptibility to atypical hemolytic uremic syndrome 4","type":"related"}],"termid":"MONDO:0013042","xrefs":{"Monarch":{"xref_id":"0013042"}}}


id: MONDO:0006611
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Formation of non-necrotizing granulomas in the skin. It may be a manifestation of systemic sarcoidosis or may also arise in isolation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"sarcoidosis","termid":"MONDO:0019338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"skin sarcoidosis","secondary_identifiers":["NCIT:C34996","EFO:1000767","SCTID:55941000","Wikipedia:Cutaneous_manifestations_of_sarcoidosis","ICD10CM:D86.3","MEDGEN:19872","DOID:13402","UMLS:C0036203"],"synonyms":[{"name":"cutaneous sarcoid","type":"exact"},{"name":"cutaneous sarcoidosis","type":"exact"},{"name":"sarcoidosis of zone of skin","type":"exact"},{"name":"zone of skin sarcoidosis","type":"exact"}],"termid":"MONDO:0006611","xrefs":{"Monarch":{"xref_id":"0006611"}}}


id: PBO:0053132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipid droplet assembly factor 1","termid":"PBO:0053132"}


id: GO:1901213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the development of the heart over time.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in heart development (obsolete GO:1901213)","synonyms":[{"name":"global transcription regulation from Pol II promoter involved in cardiac development","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in heart development","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in heart development","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in heart development","type":"related"},{"name":"regulation of transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"regulation of transcription from Pol II promoter involved in dorsal vessel development","type":"narrow"},{"name":"regulation of transcription from Pol II promoter involved in heart development","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"narrow"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in cardiac development","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in dorsal vessel development","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in heart development","type":"related"}],"termid":"GO:1901213"}


id: PR:P0CS84
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1348.15 gene.","definition_xrefs":["UniProtKB:P0CS84","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1348.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1348.15","synonyms":[{"name":"Spom972h-SPBC1348.15","type":"exact"}],"termid":"PR:P0CS84"}


id: PBO:0070297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 3","termid":"PBO:0070297"}


id: GO:2000745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of transcription from RNA polymerase III promoter that is involved in smooth muscle cell differentiation.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase III promoter involved in smooth muscle cell differentiation (obsolete GO:2000745)","synonyms":[{"name":"activation of transcription from RNA polymerase III promoter of nonstriated muscle cell differentiation","type":"related"},{"name":"activation of transcription from RNA polymerase III promoter of smooth muscle cell differentiation","type":"related"},{"name":"positive regulation of transcription from Pol III promoter of nonstriated muscle cell differentiation","type":"exact"},{"name":"positive regulation of transcription from Pol III promoter of smooth muscle cell differentiation","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase III promoter involved in smooth muscle cell differentiation","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase III promoter of nonstriated muscle cell differentiation","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase III promoter of smooth muscle cell differentiation","type":"exact"},{"name":"stimulation of transcription from RNA polymerase III promoter of nonstriated muscle cell differentiation","type":"related"},{"name":"stimulation of transcription from RNA polymerase III promoter of smooth muscle cell differentiation","type":"related"},{"name":"up regulation of transcription from RNA polymerase III promoter of nonstriated muscle cell differentiation","type":"exact"},{"name":"up regulation of transcription from RNA polymerase III promoter of smooth muscle cell differentiation","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase III promoter of nonstriated muscle cell differentiation","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase III promoter of smooth muscle cell differentiation","type":"exact"},{"name":"upregulation of transcription from RNA polymerase III promoter of nonstriated muscle cell differentiation","type":"exact"},{"name":"upregulation of transcription from RNA polymerase III promoter of smooth muscle cell differentiation","type":"exact"}],"termid":"GO:2000745"}


id: GO:0090417
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of N-methylnicotinate from one side of a membrane to the other.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quaternary ammonium group transmembrane transporter activity","termid":"GO:0015651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"N-methylnicotinate transmembrane transporter activity","synonyms":[{"name":"N-methylnicotinate transporter activity","type":"related"}],"termid":"GO:0090417"}


id: PBO:0030536
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_processing","termid":"PBO:0030536"}


id: MONDO:0030116
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Silver-Russell syndrome","termid":"MONDO:0008394"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silver-russell syndrome 2","secondary_identifiers":["UMLS:C5394446","MEDGEN:1714148","OMIM:618905"],"synonyms":[{"name":"SILVER-RUSSELL SYNDROME 2","type":"exact"},{"name":"SRS2","type":"exact"},{"name":"Uniparental Disomy, Maternal, Chromosome 7","type":"exact"},{"name":"silver-russell syndrome 2","type":"exact"}],"termid":"MONDO:0030116","xrefs":{"Monarch":{"xref_id":"0030116"}}}


id: PBO:0064436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyribonucleotide nucleotidyltransferase 1 pseudogene 1","termid":"PBO:0064436"}


id: PBO:0045309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA methyltransferase 3 beta","termid":"PBO:0045309"}


id: MONDO:0016023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ocular coloboma (obsolete MONDO:0016023)","termid":"MONDO:0016023","xrefs":{"Monarch":{"xref_id":"0016023"}}}


id: MONDO:0005522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from epithelial cells of the small intestine","direct_ancestors":[{"relation_name":"is_a","term_name":"small intestine cancer","termid":"MONDO:0000956"},{"relation_name":"is_a","term_name":"digestive system carcinoma","termid":"MONDO:0006181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"small intestine carcinoma","secondary_identifiers":["MEDGEN:65952","EFO:0005588","NCIT:C7724","ONCOTREE:SIC","UMLS:C0238196","DOID:4907","SCTID:448664009","icd11.foundation:1484520499"],"synonyms":[{"name":"cancer of small bowel","type":"broad"},{"name":"cancer of the small bowel","type":"broad"},{"name":"carcinoma of small bowel","type":"exact"},{"name":"carcinoma of small intestine","type":"exact"},{"name":"carcinoma of the small bowel","type":"exact"},{"name":"carcinoma of the small intestine","type":"exact"},{"name":"small bowel cancer","type":"broad"},{"name":"small bowel carcinoma","type":"exact"},{"name":"small intestinal cancer","type":"broad"},{"name":"small intestinal carcinoma","type":"exact"},{"name":"small intestine cancer","type":"broad"},{"name":"small intestine cancer, NOS","type":"exact"},{"name":"small intestine carcinoma","type":"exact"}],"termid":"MONDO:0005522","xrefs":{"Monarch":{"xref_id":"0005522"}}}


id: GO:0035756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont moves from one side of an epithelium to the other within its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:bf","PMID:10639460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated migration across host tissue barrier","termid":"GO:0141142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated migration across host transepithelium","synonyms":[{"name":"migration in host through an epithelial cell layer","type":"exact"},{"name":"migration of symbiont within host by transepithelial trafficking","type":"exact"},{"name":"symbiont-mediated migration through host transepithelium","type":"exact"},{"name":"transepithelial migration of symbiont in host","type":"exact"},{"name":"transmigration of symbiont in host","type":"related"}],"termid":"GO:0035756"}


id: GO:0034671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands that results in the spatial identity of regions along the anterior-posterior axis of the pronephros.","definition_xrefs":["GOC:mh"],"gene_count":0,"genotype_count":0,"name":"obsolete retinoic acid receptor signaling pathway involved in pronephros anterior/posterior pattern specification (obsolete GO:0034671)","synonyms":[{"name":"retinoic acid receptor signaling pathway involved in pronephric kidney anterior/posterior pattern specification","type":"exact"},{"name":"retinoic acid receptor signalling pathway involved in pronephros anterior-posterior patterning","type":"exact"}],"termid":"GO:0034671"}


id: PBO:0040584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BABAM2 antisense RNA 1","termid":"PBO:0040584"}


id: GO:0016303
data:
  {"annotated_genes":["SJAG_00114"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73300],"is_not":false,"summary":null,"term":"GO:0016303"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1-phosphatidyl-1D-myo-inositol + ATP = a 1-phosphatidyl-1D-myo-inositol 3-phosphate + ADP + H+.","definition_xrefs":["RHEA:12709","EC:2.7.1.137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol kinase activity","termid":"GO:0052742"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00114":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"1-phosphatidylinositol-3-kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9680389","Reactome:R-HSA-2045911","MetaCyc:1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN","Reactome:R-HSA-9670433","GO:0004429","Reactome:R-HSA-1676024","Reactome:R-HSA-1675961","Reactome:R-HSA-109699","Reactome:R-HSA-1675939","KEGG_REACTION:R03362","Reactome:R-HSA-5672012","Reactome:R-HSA-1433514","Reactome:R-HSA-6798174"],"synonyms":[{"name":"1-phosphatidylinositol 3-kinase activity","type":"exact"},{"name":"PI3-kinase activity","type":"exact"},{"name":"PI3K","type":"exact"},{"name":"PtdIns-3-kinase activity","type":"exact"},{"name":"phosphatidylinositol 3-kinase activity, class I","type":"narrow"},{"name":"phosphatidylinositol 3-kinase activity, class II","type":"narrow"},{"name":"phosphatidylinositol 3-kinase activity, class III","type":"narrow"},{"name":"phosphatidylinositol 3-kinase, class I, catalyst activity","type":"narrow"},{"name":"type I phosphatidylinositol kinase activity","type":"narrow"},{"name":"type III phosphoinositide 3-kinase activity","type":"narrow"}],"termid":"GO:0016303","terms_by_termid":{"GO:0016303":null}}


id: PBO:0058864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9851","termid":"PBO:0058864"}


id: GO:0004536
data:
  {"annotated_genes":["SJAG_02818","SJAG_02556","SJAG_03724","SJAG_04752","SJAG_01173","SJAG_01832","SJAG_01262","SJAG_04410","SJAG_05373","SJAG_02908","SJAG_00623","SJAG_02828","SJAG_02298","SJAG_02031","SJAG_04183","SJAG_02708","SJAG_05280","SJAG_01163","SJAG_03665","SJAG_01044","SJAG_01948","SJAG_03675","SJAG_00377","SJAG_01648","SJAG_03734","SJAG_03994","SJAG_05237"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[120648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990599"},{"annotations":[76822,77267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008296"},{"annotations":[76082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048257"},{"annotations":[105980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990601"},{"annotations":[73020,90210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035312"},{"annotations":[77336,80213,74511,67774,76301,73014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017108"},{"annotations":[66684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140078"},{"annotations":[96552,60019,80294,102992,76078,81050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008821"},{"annotations":[107773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033892"},{"annotations":[78779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033699"},{"annotations":[74931,81649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003906"},{"annotations":[74933,90367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008311"},{"annotations":[98938,109592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051908"},{"annotations":[102994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106332"},{"annotations":[102962,75749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008310"},{"annotations":[74388,98940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045145"},{"annotations":[73606,112675,81142,111883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000014"}]},"cv_name":"molecular_function","definition":"Catalysis of the cleavage of ester linkages within deoxyribonucleic acid.","definition_xrefs":["ISBN:0198547684","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease activity","termid":"GO:0004518"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00377":null,"SJAG_00623":null,"SJAG_01044":null,"SJAG_01163":null,"SJAG_01173":null,"SJAG_01262":null,"SJAG_01648":null,"SJAG_01832":null,"SJAG_01948":null,"SJAG_02031":null,"SJAG_02298":null,"SJAG_02556":null,"SJAG_02708":null,"SJAG_02818":null,"SJAG_02828":null,"SJAG_02908":null,"SJAG_03665":null,"SJAG_03675":null,"SJAG_03724":null,"SJAG_03734":null,"SJAG_03994":null,"SJAG_04183":null,"SJAG_04410":null,"SJAG_04752":null,"SJAG_05237":null,"SJAG_05280":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140097","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"DNA nuclease activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0004537","Reactome:R-HSA-6785986","Reactome:R-HSA-211247","Reactome:R-HSA-5685994"],"synonyms":[{"name":"caspase-activated deoxyribonuclease activity","type":"narrow"},{"name":"deoxyribonuclease activity","type":"exact"}],"termid":"GO:0004536","terms_by_termid":{"GO:0000014":null,"GO:0003906":null,"GO:0008296":null,"GO:0008310":null,"GO:0008311":null,"GO:0008821":null,"GO:0017108":null,"GO:0033699":null,"GO:0033892":null,"GO:0035312":null,"GO:0045145":null,"GO:0048257":null,"GO:0051908":null,"GO:0106332":null,"GO:0140078":null,"GO:1990599":null,"GO:1990601":null}}


id: PBO:0016115
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by S. cerevisiae SRP54","termid":"PBO:0016115"}


id: GO:0047735
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cellobiose + acceptor = cellobiono-1,5-lactone + reduced acceptor.","definition_xrefs":["EC:1.1.99.18","MetaCyc:CELLOBIOSE-DEHYDROGENASE-ACCEPTOR-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cellobiose dehydrogenase (acceptor) activity","secondary_identifiers":["GO:0047737","RHEA:23484"],"synonyms":[{"name":"CBOR activity","type":"related"},{"name":"CDH activity","type":"related"},{"name":"cellobiose dehydrogenase (quinone) activity","type":"narrow"},{"name":"cellobiose dehydrogenase activity","type":"related"},{"name":"cellobiose oxidase activity","type":"related"},{"name":"cellobiose oxidoreductase activity","type":"related"},{"name":"cellobiose-quinone oxidoreductase activity","type":"narrow"},{"name":"cellobiose:(acceptor) 1-oxidoreductase activity","type":"related"},{"name":"cellobiose:acceptor 1-oxidoreductase activity","type":"related"},{"name":"cellobiose:oxygen 1-oxidoreductase activity","type":"related"},{"name":"phanerochaete chrysosporium cellobiose oxidoreductase activity","type":"related"}],"termid":"GO:0047735"}


id: GO:0061581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a corneal epithelial cell from one site to another, often during the development of a multicellular organism.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration","termid":"GO:0010631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corneal epithelial cell migration","termid":"GO:0061581"}


id: GO:0003785
data:
  {"annotated_genes":["SJAG_04982","SJAG_01993"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73739,77281],"is_not":false,"summary":null,"term":"GO:0003785"}]},"cv_name":"molecular_function","definition":"Binding to monomeric actin, also known as G-actin.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin binding","termid":"GO:0003779"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01993":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003779"}],"interesting_parent_ids":["GO:0008092","GO:0003779","GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"actin monomer binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"G actin binding","type":"exact"}],"termid":"GO:0003785","terms_by_termid":{"GO:0003785":null}}


id: SO:0000374
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An RNA with catalytic activity.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"ribozymic","termid":"SO:0001186"},{"relation_name":"is_a","term_name":"enzymatic_RNA","termid":"SO:0000372"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribozyme","secondary_identifiers":["http://en.wikipedia.org/wiki/Ribozyme"],"synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:ribozyme","type":"exact"}],"termid":"SO:0000374"}


id: PBO:0071932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 9","termid":"PBO:0071932"}


id: GO:0034237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to one or both of the regulatory subunits of protein kinase A.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase A binding","termid":"GO:0051018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"protein kinase A regulatory subunit binding","synonyms":[{"name":"PKA regulatory subunit binding","type":"exact"},{"name":"protein kinase A anchoring activity","type":"related"}],"termid":"GO:0034237"}


id: MONDO:0013064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any multiple synostoses syndrome in which the cause of the disease is a mutation in the FGF9 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple synostoses syndrome","termid":"MONDO:0017923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"multiple synostoses syndrome 3","secondary_identifiers":["MEDGEN:414116","DOID:0081319","GARD:15597","OMIM:612961","UMLS:C2751826","MESH:C567839"],"synonyms":[{"name":"FGF9 multiple synostoses syndrome","type":"exact"},{"name":"SYNS3","type":"related"},{"name":"multiple synostoses syndrome 3","type":"exact"},{"name":"multiple synostoses syndrome caused by mutation in FGF9","type":"exact"},{"name":"multiple synostoses syndrome type 3","type":"exact"}],"termid":"MONDO:0013064","xrefs":{"Monarch":{"xref_id":"0013064"}}}


id: GO:0032904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of production of nerve growth factor (NGF).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neurotrophin production","termid":"GO:0032900"},{"relation_name":"is_a","term_name":"regulation of nerve growth factor production","termid":"GO:0032903"},{"relation_name":"negatively_regulates","term_name":"nerve growth factor production","termid":"GO:0032902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nerve growth factor production","synonyms":[{"name":"down regulation of nerve growth factor production","type":"exact"},{"name":"down-regulation of nerve growth factor production","type":"exact"},{"name":"downregulation of nerve growth factor production","type":"exact"},{"name":"inhibition of nerve growth factor production","type":"narrow"},{"name":"negative regulation of NGF production","type":"exact"}],"termid":"GO:0032904"}


id: PBO:0034064
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_ectoparasite","termid":"PBO:0034064"}


id: PBO:0083469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene PET130","termid":"PBO:0083469"}


id: GO:1990491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of methane from methanol and hydrogen.","definition_xrefs":["GOC:mengo_curators","PMID:16347126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methanogenesis, from methanol","termid":"GO:0019387"},{"relation_name":"is_a","term_name":"hydrogen metabolic process","termid":"GO:1902421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006091","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"methane biosynthetic process from methanol and hydrogen","synonyms":[{"name":"methane biosynthesis from methanol and hydrogen","type":"exact"},{"name":"methanogenesis from methanol and hydrogen","type":"exact"}],"termid":"GO:1990491"}


id: _global:has_divisor_entity
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_divisor_entity","termid":"_global:has_divisor_entity"}


id: PBO:0017449
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-parasite_of","termid":"PBO:0017449"}


id: MONDO:0006913
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute purulent infection of the meninges and subarachnoid space caused by Streptococcus pneumoniae, most prevalent in children and adults over the age of 60. This illness may be associated with otitis media; mastoiditis; sinusitis; respiratory tract infections; sickle cell disease (anemia, sickle cell); skull fractures; and other disorders. Clinical manifestations include fever; headache; neck stiffness; and somnolence followed by seizures; focal neurologic deficits (notably deafness); and coma. (From Miller et al., Merritt's Textbook of Neurology, 9th ed, p111)","definition_xrefs":["MESH:D008586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"streptococcal meningitis","termid":"MONDO:0001316"},{"relation_name":"is_a","term_name":"pneumococcal infection","termid":"MONDO:0005114"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pneumococcal meningitis","secondary_identifiers":["NCIT:C157958","MedDRA:10035645","Orphanet:55655","MedDRA:10027253","ICD9:320.1","EFO:1001114","SCTID:51169003","UMLS:C0025295","GARD:18849","ICD10CM:G00.1","MEDGEN:44354"],"synonyms":[{"name":"Streptococcus pneumoniae caused infectious meningitis","type":"exact"},{"name":"Streptococcus pneumoniae infectious meningitis","type":"exact"}],"termid":"MONDO:0006913","xrefs":{"Monarch":{"xref_id":"0006913"}}}


id: PR:Q8TFG7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA (guanine-N(1)-)-methyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01652","PANTHER:PTHR23245:SF25","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanine(37)-N1)-methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB18E9.01","secondary_identifiers":["UniProtKB:Q8TFG7"],"synonyms":[{"name":"M1G-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-TRMT5","type":"exact"},{"name":"tRNA [GM37] methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA methyltransferase 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q8TFG7"}


id: MONDO:0008008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"MOMO syndrome is a very rare genetic overgrowth/obesity syndrome characterized by macrocephaly, obesity, mental (intellectual) disability and ocular abnormalities. Other frequent clinical signs include macrosomia, downslanting palpebral fissures, hypertelorism, broad nasal root, high and broad forehead and delay in bone maturation, in association with normal thyroid function and karyotype.","definition_xrefs":["Orphanet:2563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOMO syndrome","secondary_identifiers":["UMLS:C1834759","OMIM:157980","SCTID:724137002","GARD:178","MEDGEN:371897","MESH:C535812"],"synonyms":[{"name":"MOMO syndrome","type":"exact"},{"name":"macrocephaly-obesity-mental disability-ocular abnormalities syndrome","type":"exact"},{"name":"macrocrania, obesity, ocular abnormalities (retinal coloboma and nystagmus)","type":"related"},{"name":"macrosomia, obesity, macrocephaly, and ocular abnormalities","type":"related"},{"name":"macrosomia, obesity, macrocephaly, ocular abnormalities","type":"related"},{"name":"macrosomia-obesity-macrocephaly-ocular abnormalities syndrome","type":"exact"}],"termid":"MONDO:0008008","xrefs":{"Monarch":{"xref_id":"0008008"}}}


id: GO:0052323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of phytoalexin biosynthesis, the chemical reactions and pathways resulting in the formation of phytoalexins.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phytoalexin biosynthetic process (obsolete GO:0052323)","synonyms":[{"name":"down regulation of phytoalexin biosynthesis","type":"exact"},{"name":"down-regulation of phytoalexin biosynthesis","type":"exact"},{"name":"downregulation of phytoalexin biosynthesis","type":"exact"},{"name":"inhibition of phytoalexin biosynthesis","type":"narrow"},{"name":"negative regulation of phytoalexin biosynthesis","type":"exact"}],"termid":"GO:0052323"}


id: FYPO:0007937
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the number of sites of DNA breakpoint junctions is greater than normal during stationary phase.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of DNA breakpoint junctions","termid":"FYPO:0007936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"increased number of DNA breakpoint junctions during stationary phase","termid":"FYPO:0007937"}


id: PBO:0089867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxymethylbilane synthase Hem3","termid":"PBO:0089867"}


id: PBO:0028042
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_microtubule_depolymerization_at_minus_end","termid":"PBO:0028042"}


id: PBO:0040279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATOX1 antisense RNA 1","termid":"PBO:0040279"}


id: PR:O36032
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutaredoxin-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02023","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.20","secondary_identifiers":["UniProtKB:O36032"],"synonyms":[{"name":"Spom972h-GLRX","type":"exact"}],"termid":"PR:O36032"}


id: FYPO:0007615
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more STREP motifs occurs to a greater extent than normal during a cellular response to nitric oxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during cellular response to nitric oxide","termid":"FYPO:0002781"},{"relation_name":"is_a","term_name":"increased transcription from STREP promoter","termid":"FYPO:0007612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000294","FYPO:0001320","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"increased transcription from STREP promoter during cellular response to nitric oxide","synonyms":[{"name":"increased transcription from STREP promoter during cellular response to NO","type":"exact"},{"name":"increased transcription from STREP promoter during cellular response to nitric oxide during mitotic cell cycle","type":"related"},{"name":"increased transcription from STREP promoter during cellular response to nitric oxide during vegetative growth","type":"exact"}],"termid":"FYPO:0007615"}


id: PBO:0036013
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_acetylation_during_vegetative_growth","termid":"PBO:0036013"}


id: PBO:0074655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 44","termid":"PBO:0074655"}


id: GO:1905621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of alpha-(1->3)-fucosyltransferase activity.","definition_xrefs":["GOC:TermGenie","PMID:15364955","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of alpha-(1->3)-fucosyltransferase activity (obsolete GO:1905621)","synonyms":[{"name":"activation of alpha(1,3)-fucosyltransferase activity","type":"narrow"},{"name":"activation of alpha-(1,3)-fucosyltransferase activity","type":"narrow"},{"name":"activation of alpha-(1->3)-fucosyltransferase activity","type":"narrow"},{"name":"activation of alpha-1,3-fucosyltransferase activity","type":"narrow"},{"name":"positive regulation of alpha(1,3)-fucosyltransferase activity","type":"exact"},{"name":"positive regulation of alpha-(1,3)-fucosyltransferase activity","type":"exact"},{"name":"positive regulation of alpha-1,3-fucosyltransferase activity","type":"exact"},{"name":"up regulation of alpha(1,3)-fucosyltransferase activity","type":"exact"},{"name":"up regulation of alpha-(1,3)-fucosyltransferase activity","type":"exact"},{"name":"up regulation of alpha-(1->3)-fucosyltransferase activity","type":"exact"},{"name":"up regulation of alpha-1,3-fucosyltransferase activity","type":"exact"},{"name":"up-regulation of alpha(1,3)-fucosyltransferase activity","type":"exact"},{"name":"up-regulation of alpha-(1,3)-fucosyltransferase activity","type":"exact"},{"name":"up-regulation of alpha-(1->3)-fucosyltransferase activity","type":"exact"},{"name":"up-regulation of alpha-1,3-fucosyltransferase activity","type":"exact"},{"name":"upregulation of alpha(1,3)-fucosyltransferase activity","type":"exact"},{"name":"upregulation of alpha-(1,3)-fucosyltransferase activity","type":"exact"},{"name":"upregulation of alpha-(1->3)-fucosyltransferase activity","type":"exact"},{"name":"upregulation of alpha-1,3-fucosyltransferase activity","type":"exact"}],"termid":"GO:1905621"}


id: GO:0003134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from endodermal cells to mesodermal cells that contributes to heart induction.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endodermal-mesodermal cell signaling","termid":"GO:0003133"},{"relation_name":"part_of","term_name":"heart induction","termid":"GO:0003129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"endodermal-mesodermal cell signaling involved in heart induction","synonyms":[{"name":"endodermal-mesodermal cell signalling involved in heart induction","type":"exact"}],"termid":"GO:0003134"}


id: FYPO:0002926
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an interaction between a protein and polyadenylated RNA (poly(A)RNA) does not occur. One of the relevant gene products may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-RNA interaction","termid":"FYPO:0002133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002131"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002131","FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abolished poly(A) RNA binding","synonyms":[{"name":"abolished adenosine recognition in polyA tail","type":"narrow"},{"name":"abolished polyA RNA binding","type":"exact"},{"name":"abolished polyadenylated RNA binding","type":"exact"},{"name":"abolished protein-poly(A) RNA interaction","type":"exact"},{"name":"poly(A) RNA binding abolished","type":"exact"}],"termid":"FYPO:0002926"}


id: GO:0042931
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of the siderochrome enterochelin, a cyclic trimer of 2, 3 dihydroxybenzoylserine from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"siderophore-iron transmembrane transporter activity","termid":"GO:0015343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"enterobactin transmembrane transporter activity","synonyms":[{"name":"enterobactin transporter activity","type":"related"},{"name":"enterochelin transporter activity","type":"exact"}],"termid":"GO:0042931"}


id: MONDO:0019581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acral persistent papular mucinosis is a rare chronic form of localized lichen myxedematosus characterized by the development of multiple symmetrical skin-colored mucinous papules exclusively on the extensor surface of the hands and distal forearms.","definition_xrefs":["Orphanet:90396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localized lichen myxedematosus","termid":"MONDO:0019446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acral persistent papular mucinosis","secondary_identifiers":["UMLS:C0406660","ICD9:701.8","SCTID:238949006","icd11.foundation:712202928","GARD:19140","MEDGEN:590586"],"termid":"MONDO:0019581","xrefs":{"Monarch":{"xref_id":"0019581"}}}


id: GO:1905544
data:
  {"annotated_genes":["SJAG_00991"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95143],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"The directed movement of L-methionine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:17556368","GOC:TermGenie","GO_REF:0000075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"},{"relation_name":"is_a","term_name":"methionine import across plasma membrane","termid":"GO:1903692"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00991":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"L-methionine import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1903813"],"synonyms":[{"name":"L-methionine import into cell","type":"exact"}],"termid":"GO:1905544","terms_by_termid":{"GO:1905626":null}}


id: GO:1901508
data:
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id: PBO:0027614
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vegetative_cell_phenotype_following_normal_mitosis","termid":"PBO:0027614"}


id: GO:0032177
data:
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id: GO:0005673
data:
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id: SO:0001579
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001579 transcript_sequence_variant (obsolete SO:0001579)","synonyms":[{"name":"transcript sequence variant","type":"exact"}],"termid":"SO:0001579"}


id: PBO:0067195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 259, pseudogene","termid":"PBO:0067195"}


id: FYPO:0001362
data:
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aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]},"rga6delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga6delta wee1-as8(T582G aa)","display_uniquename":"rga6delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00028:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"sep1delta":{"display_name":"sep1delta","display_uniquename":"sep1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03143:allele-1","expression":"Null"}]}]},"shc1delta":{"display_name":"shc1delta","display_uniquename":"shc1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03360:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"vps24delta":{"display_name":"vps24delta","display_uniquename":"vps24delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03783:allele-1","expression":"Null"}]}]},"vps32delta":{"display_name":"vps32delta","display_uniquename":"vps32delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01242:allele-1","expression":"Null"}]}]},"vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"vps4-ts(I307T L327S aa)","display_uniquename":"vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-3","expression":"Not assayed or wild type"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_05207","SJAG_00871","SJAG_04280","SJAG_04522","SJAG_02392","SJAG_04464","SJAG_03596","SJAG_00028","SJAG_01143","SJAG_03892","SJAG_01050","SJAG_00118"],"name":"abnormal cellular process during vegetative growth","references_by_uniquename":{"PMID:21802294":null,"PMID:22300943":null,"PMID:23786411":null,"PMID:24184107":null,"PMID:24699070":null,"PMID:25318672":null,"PMID:25866389":null,"PMID:26774782":null,"PMID:27059155":null,"PMID:28954740":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:32109380":null,"PMID:32243490":null,"PMID:32915139":null,"PMID:33495454":null,"PMID:33791858":null,"PMID:34198697":null,"PMID:35226668":null,"PMID:36058798":null,"PMID:37164017":null,"PMID:40195311":null},"single_locus_annotated_genes":["SJAG_04280","SJAG_00409","SJAG_01834","SJAG_01956","SJAG_01787","SJAG_01374","SJAG_04284","SJAG_00370","SJAG_05207","SJAG_03143","SJAG_02252","SJAG_04522","SJAG_01745","SJAG_02592","SJAG_01906","SJAG_03449","SJAG_04464","SJAG_03444","SJAG_03596","SJAG_04551","SJAG_01050","SJAG_04489","SJAG_03892","SJAG_00514","SJAG_00118","SJAG_03351","SJAG_01330","SJAG_03940","SJAG_02392","SJAG_02763","SJAG_00426","SJAG_03360","SJAG_04703","SJAG_00610","SJAG_01242","SJAG_03891","SJAG_03689","SJAG_01143","SJAG_03783","SJAG_04697","SJAG_03575"],"single_locus_genotype_uniquenames":["man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","agn1delta","ned1delta","man1delta","did4delta","cmp7delta","sty1delta","rga4delta","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","pck2delta","erg1delta","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","alx1delta","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","nup61delta","sep1delta","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","dcr1delta","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","shc1delta","mid1delta","vps32delta","vps24delta","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","nem1delta","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","mad2delta","pom152delta","vps4delta","lem2delta","pck1delta","nem2delta","scd1delta","ace2delta","mid2delta","pom1delta","nup132delta","cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","for3delta","nur1delta","gms1delta","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","gpd1delta"],"synonyms":[{"name":"abnormal cellular process during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001362","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000026":null,"FYPO:0000118":null,"FYPO:0000198":null,"FYPO:0000231":null,"FYPO:0000324":null,"FYPO:0000356":null,"FYPO:0000595":null,"FYPO:0000618":null,"FYPO:0000619":null,"FYPO:0000671":null,"FYPO:0000729":null,"FYPO:0000731":null,"FYPO:0000815":null,"FYPO:0001038":null,"FYPO:0001132":null,"FYPO:0001369":null,"FYPO:0001556":null,"FYPO:0001784":null,"FYPO:0001838":null,"FYPO:0001971":null,"FYPO:0002026":null,"FYPO:0002033":null,"FYPO:0002870":null,"FYPO:0002998":null,"FYPO:0003315":null,"FYPO:0003657":null,"FYPO:0003727":null,"FYPO:0003779":null,"FYPO:0003946":null,"FYPO:0003973":null,"FYPO:0003976":null,"FYPO:0004105":null,"FYPO:0004318":null,"FYPO:0004890":null,"FYPO:0005503":null,"FYPO:0005957":null,"FYPO:0006433":null,"FYPO:0006545":null,"FYPO:0006557":null,"FYPO:0007073":null,"FYPO:0007177":null,"FYPO:0007770":null,"FYPO:0007771":null,"FYPO:0007772":null,"FYPO:0007783":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: PBO:0077512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 230","termid":"PBO:0077512"}


id: PBO:0057943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR3667 host gene","termid":"PBO:0057943"}


id: GO:0035527
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxypropanoate + NADP+ = 3-oxopropanoate + H+ + NADPH.","definition_xrefs":["RHEA:26438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3-hydroxypropionate dehydrogenase (NADP+) activity","secondary_identifiers":["KEGG_REACTION:R09289","MetaCyc:RXN-8974","EC:1.1.1.298"],"synonyms":[{"name":"3-hydroxypropanoate dehydrogenase (NADP+) activity","type":"exact"},{"name":"3-hydroxypropanoate:NADP+ oxidoreductase","type":"related"},{"name":"3-hydroxypropionate:NADP+ oxidoreductase","type":"related"}],"termid":"GO:0035527"}


id: MONDO:0017239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial progressive hyper- and hypopigmentation is a rare, genetic, skin pigmentation anomaly disorder characterized by progressive, diffuse, partly blotchy, hyperpigmented lesions that are intermixed with multiple café-au-lait spots, hypopigmented maculae and lentigines and are located on the face, neck, trunk and limbs, as well as, frequently, the palms, soles and oral mucosa. Dispigmentation pattern can range from well isolated café-au-lait/hypopigmented patches on a background of normal-appearing skin to confetti-like or mottled appearance.","definition_xrefs":["Orphanet:280628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperpigmentation with or without hypopigmentation, familial progressive","termid":"MONDO:0007771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"familial progressive hyper- and hypopigmentation","secondary_identifiers":["GARD:17298","MEDGEN:1643385","icd11.foundation:1229773662","UMLS:C4706423"],"synonyms":[{"name":"FPHH","type":"exact"}],"termid":"MONDO:0017239","xrefs":{"Monarch":{"xref_id":"0017239"}}}


id: PBO:0054809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2222","termid":"PBO:0054809"}


id: MONDO:0030711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital dyserythropoietic anemia","termid":"MONDO:0019403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"Anemia, congenital dyserythropoietic, type IIIb, autosomal recessive","secondary_identifiers":["MEDGEN:1800829","OMIM:619789","UMLS:C5676940"],"synonyms":[{"name":"CDA, IIA IIIB","type":"exact"},{"name":"CDAN3B","type":"exact"},{"name":"anemia, congenital dyserythropoietic, IIA IIIB, autosomal recessive","type":"exact"}],"termid":"MONDO:0030711","xrefs":{"Monarch":{"xref_id":"0030711"}}}


id: MONDO:0016641
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"limb transversal defect-cardiac anomaly syndrome","secondary_identifiers":["Orphanet:2492","UMLS:C2931047","MESH:C535856","MEDGEN:419705"],"synonyms":[{"name":"Hecht-Scott syndrome","type":"exact"}],"termid":"MONDO:0016641","xrefs":{"Monarch":{"xref_id":"0016641"}}}


id: PBO:0113166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inositol hexakisphosphate (IP6) and inositol heptakisphosphate (IP7) kinase; generation of high energy inositol pyrophosphates by Kcs1p is required for many processes such as vacuolar biogenesis, stress response, RNA polymerase I-mediated rRNA transcription and telomere maintenance; phosphorylated by the AMPK Snf1p, leading to reduced levels of pyrophosphorylated IP7, increased filamentous and invasive growth and increased cell elongation","termid":"PBO:0113166"}


id: MONDO:1012863
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurodegenerative brain disorder with mitochondrial dysfunction, amyloid-β accumulation, and lethal epilepsy that occurs in dogs due to a mutation in the PITRM1 gene.","definition_xrefs":["PMID:33835239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy, dog","termid":"MONDO:1010411"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, mitochondrial dysfunction and neurodegeneration, PITRM1-related, dog","secondary_identifiers":["OMIA:002324-9615"],"termid":"MONDO:1012863","xrefs":{"Monarch":{"xref_id":"1012863"}}}


id: GO:0060425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the lung are generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung morphogenesis","termid":"GO:0060425"}


id: PBO:0058049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4270","termid":"PBO:0058049"}


id: GO:0099086
data:
  {"annotated_genes":["SJAG_03843","SJAG_02490","SJAG_02652","SJAG_05333","SJAG_03438","SJAG_07002","SJAG_04303","SJAG_00172","SJAG_04748"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[106706,96563,111489,112977,90872,92147,117397,111397,93281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030998"}]},"cv_name":"cellular_component","definition":"A proteinaceous scaffold found between homologous chromosomes during meiosis.","definition_xrefs":["GOC:elh","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"condensed nuclear chromosome","termid":"GO:0000794"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00172":null,"SJAG_02490":null,"SJAG_02652":null,"SJAG_03438":null,"SJAG_03843":null,"SJAG_04303":null,"SJAG_04748":null,"SJAG_05333":null,"SJAG_07002":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"synaptonemal structure","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099086","terms_by_termid":{"GO:0030998":null}}


id: GO:0045508
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-26 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-26 receptor activity","synonyms":[{"name":"IL-26 receptor activity","type":"exact"},{"name":"IL-26R","type":"exact"}],"termid":"GO:0045508"}


id: FYECO:0000061
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which a xenobiotic substrate was added to the medium or assay buffer in excess compared to standard medium or assay buffers. A xenobiotic substrate is a macromolecular substrate which is not synthesised by S. pombe.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ xenobiotic substrate","termid":"FYECO:0000061"}


id: PBO:0065011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 15","termid":"PBO:0065011"}


id: PBO:0031098
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spindle_checkpoint_required_(obsolete_FYPO:0000275)","termid":"PBO:0031098"}


id: GO:0070652
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that localizes to interphase centrosomes and to mitotic spindle tubules and regulates mitotic spindle assembly and centrosome integrity; in human, the complex consists of eight subunits, some of which are homologous to subunits of the Drosophila Augmin complex.","definition_xrefs":["PMID:19427217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule associated complex","termid":"GO:0005875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0015630","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"HAUS complex","synonyms":[{"name":"HAUS augmin complex","type":"exact"}],"termid":"GO:0070652"}


id: PR:000027595
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3 that is a translation product of the Schizosaccharomyces pombe 972h- hht3 gene or a 1:1 ortholog thereof in fungi.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fungal histone H3.3","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"hht3","type":"exact"}],"termid":"PR:000027595"}


id: PBO:0084586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YCR062W was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YCR061W","termid":"PBO:0084586"}


id: MONDO:0003811
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, borderline, or malignant mixed epithelial tumor of the ovary. It is characterized by the presence of more than one epithelial cell type, most often serous and endocervical-type mucinous.","definition_xrefs":["NCIT:C4508"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"ovarian benign neoplasm","termid":"MONDO:0000646"},{"relation_name":"is_a","term_name":"ovarian epithelial tumor","termid":"MONDO:0002229"},{"relation_name":"is_a","term_name":"mixed neoplasm","termid":"MONDO:0021043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian seromucinous tumor","secondary_identifiers":["MEDGEN:83409","SCTID:254855000","UMLS:C0346166","DOID:6211"],"synonyms":[{"name":"mixed epithelial neoplasm of ovary","type":"exact"},{"name":"mixed epithelial neoplasm of the ovary","type":"exact"},{"name":"mixed epithelial tumor of ovary","type":"exact"},{"name":"mixed epithelial tumor of the ovary","type":"exact"},{"name":"mixed epithelial tumour of ovary","type":"exact"},{"name":"mixed epithelial tumour of the ovary","type":"exact"},{"name":"ovarian Seromucinous tumor","type":"exact"},{"name":"ovarian Seromucinous tumour","type":"exact"},{"name":"ovarian mixed epithelial neoplasm","type":"exact"},{"name":"ovarian mixed epithelial tumor","type":"exact"},{"name":"ovarian mixed epithelial tumour","type":"exact"}],"termid":"MONDO:0003811","xrefs":{"Monarch":{"xref_id":"0003811"}}}


id: PBO:0081500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 398","termid":"PBO:0081500"}


id: MONDO:0019906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ring chromosome 11 syndrome is an autosomal anomaly characterized by variable clinical features, including early growth retardation and short stature, microcephaly, developmental delay, some degree of intellectual disability, facial dysmorphism and café-au-lait spots. In some cases, congenital heart disease and endocrine abnormalities have been reported.","definition_xrefs":["Orphanet:96175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 11 disorder","termid":"MONDO:0700018"},{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring chromosome 11","secondary_identifiers":["GARD:10846","MEDGEN:539256","SCTID:111310003","ICD9:758.89","UMLS:C0265444"],"synonyms":[{"name":"RC11","type":"exact"},{"name":"Ring 11","type":"related"},{"name":"Ring chromosome 11 syndrome","type":"related"},{"name":"Ring chromosome type 11","type":"exact"},{"name":"chromosome 11 ring","type":"related"},{"name":"r(11) syndrome","type":"exact"},{"name":"r11","type":"related"}],"termid":"MONDO:0019906","xrefs":{"Monarch":{"xref_id":"0019906"}}}


id: FYPO:0002179
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which a microcolony forms, all cells in the population are inviable and have abnormal morphology (i.e. size, shape, or structure), some cells may divide, and some cells are longer than normal.","definition_xrefs":["PomBase:jh","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population, vegetative cells with abnormal morphology, including long cells (obsolete FYPO:0002179)","synonyms":[{"name":"inviable microcolony of vegetative cells with abnormal morphology, including long cells","type":"exact"}],"termid":"FYPO:0002179"}


id: MONDO:0006094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primitive neuroectodermal tumor (small round blue cell tumor) of the thorax which can involve the periosteum, thoracic wall and/or pleura though it spares the lung parenchyma.","definition_xrefs":["NCIT:C7542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thoracic cancer","termid":"MONDO:0003274"},{"relation_name":"is_a","term_name":"peripheral primitive neuroectodermal tumor","termid":"MONDO:0018271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"Askin tumor","secondary_identifiers":["ICDO:9365/3","UMLS:C0877849","DOID:0050608","MESH:C563168","MEDGEN:209112","EFO:1000095"],"synonyms":[{"name":"Askin tumor","type":"exact"},{"name":"Askin's tumor","type":"exact"},{"name":"Askin's tumour","type":"exact"},{"name":"PNET of thoracopulmonary region","type":"exact"},{"name":"peripheral neuroectodermal tumor of thoracopulmonary region","type":"exact"},{"name":"peripheral neuroectodermal tumour of thoracopulmonary region","type":"exact"},{"name":"small cell tumor of thoracopulmonary region","type":"exact"},{"name":"small cell tumour of thoracopulmonary region","type":"exact"}],"termid":"MONDO:0006094","xrefs":{"Monarch":{"xref_id":"0006094"}}}


id: MONDO:0020811
data:
  {"annotated_genes":["SJAG_02646","SJAG_03099","SJAG_05305","SJAG_00601","SJAG_00354","SJAG_01405","SJAG_03490","SJAG_00080","SJAG_00755","SJAG_01490","SJAG_04560"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032909"},{"annotations":[87498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859321"},{"annotations":[88259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007415"},{"annotations":[86914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014063"},{"annotations":[86915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014064"},{"annotations":[86913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014065"},{"annotations":[86917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014066"},{"annotations":[87718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014194"},{"annotations":[88207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014356"},{"annotations":[88213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014364"},{"annotations":[88493],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014496"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex III deficiency","termid":"MONDO:0015448"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00080":null,"SJAG_00354":null,"SJAG_00601":null,"SJAG_00755":null,"SJAG_01405":null,"SJAG_01490":null,"SJAG_02646":null,"SJAG_03099":null,"SJAG_03490":null,"SJAG_04560":null,"SJAG_05305":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex III deficiency, nuclear type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:124000"],"termid":"MONDO:0020811","terms_by_termid":{"MONDO:0007415":null,"MONDO:0014063":null,"MONDO:0014064":null,"MONDO:0014065":null,"MONDO:0014066":null,"MONDO:0014194":null,"MONDO:0014356":null,"MONDO:0014364":null,"MONDO:0014496":null,"MONDO:0032909":null,"MONDO:0859321":null},"xrefs":{"Monarch":{"xref_id":"0020811"}}}


id: MONDO:0007509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant hypohidrotic ectodermal dysplasia","termid":"MONDO:0015884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0000426"],"is_obsolete":false,"name":"ectodermal dysplasia 10A, hypohidrotic/hair/nail type, autosomal dominant","secondary_identifiers":["GARD:18591","MEDGEN:854747","OMIM:129490","UMLS:C3888065","DOID:0111663"],"synonyms":[{"name":"ECTD10A","type":"related"},{"name":"ectodermal dysplasia 10A, hypohidrotic/hair/nail type, autosomal dominant","type":"exact"},{"name":"ectodermal dysplasia hypohidrotic autosomal dominant","type":"related"},{"name":"ectodermal dysplasia, hypohidrotic, autosomal dominant","type":"related"},{"name":"hypohidrotic ectodermal dysplasia autosomal dominant","type":"related"}],"termid":"MONDO:0007509","xrefs":{"Monarch":{"xref_id":"0007509"}}}


id: PBO:0056940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9-1","termid":"PBO:0056940"}


id: PBO:0045527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DTW domain containing 2","termid":"PBO:0045527"}


id: GO:0060597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the formation of the mammary line, placode or bud.","definition_xrefs":["PMID:16168142","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in mammary gland formation (obsolete GO:0060597)","termid":"GO:0060597"}


id: MONDO:0008962
data:
  {"annotated_genes":["SJAG_03011","SJAG_00938"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88838,88839],"is_not":false,"summary":null,"term":"MONDO:0008962"}]},"cv_name":"mondo","definition":"A Griscelli syndrome characterized by silvery gray sheen of the hair, hypopigmentation of the skin and neurological impairment without immunodeficiency that has material basis in mutations in the MYO5A gene on chromosome 15q21.2.","definition_xrefs":["PMID:9207796","DOID:0060832","PMID:12452176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Griscelli syndrome","termid":"MONDO:0018306"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_03011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"Griscelli syndrome type 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10CM:E70.3","MESH:C537301","Orphanet:79476","UMLS:C1859194","MEDGEN:347092","OMIM:214450","GARD:2566","icd11.foundation:875700770"],"synonyms":[{"name":"GS1","type":"exact"},{"name":"Griscelli disease type 1","type":"related"},{"name":"Griscelli syndrome type 1","type":"exact"},{"name":"Griscelli syndrome with neurologic impairment","type":"related"},{"name":"Griscelli syndrome with neurological impairment","type":"exact"},{"name":"Griscelli syndrome, cutaneous and neurologic type","type":"related"},{"name":"Griscelli syndrome, cutaneous and neurological type","type":"exact"},{"name":"Griscelli syndrome, type 1","type":"related"},{"name":"Griscelli-PruniC)ras syndrome type 1","type":"exact"},{"name":"Griscelli-Pruniéras syndrome type 1","type":"exact"},{"name":"hypopigmentation-neurologic impairment syndrome","type":"exact"},{"name":"partial albinism and primary neurologic disease without hemophagocytic syndrome","type":"related"},{"name":"pigmentary dilution of the skin and hair, the presence of large clumps of pigment in hair shafts","type":"related"}],"termid":"MONDO:0008962","terms_by_termid":{"MONDO:0008962":null},"xrefs":{"Monarch":{"xref_id":"0008962"}}}


id: GO:1903640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of gastrin-induced gastric acid secretion.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11123201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gastric acid secretion","termid":"GO:0060455"},{"relation_name":"is_a","term_name":"regulation of gastrin-induced gastric acid secretion","termid":"GO:1903639"},{"relation_name":"negatively_regulates","term_name":"gastrin-induced gastric acid secretion","termid":"GO:0001698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of gastrin-induced gastric acid secretion","synonyms":[{"name":"down regulation of gastrin-induced gastric acid secretion","type":"exact"},{"name":"down-regulation of gastrin-induced gastric acid secretion","type":"exact"},{"name":"downregulation of gastrin-induced gastric acid secretion","type":"exact"},{"name":"inhibition of gastrin-induced gastric acid secretion","type":"narrow"}],"termid":"GO:1903640"}


id: GO:1904744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of telomeric DNA binding.","definition_xrefs":["GOC:TermGenie","PMID:24415760","GOC:BHF_telomere","GO_REF:0000059","GOC:BHF","GOC:nc"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of telomeric DNA binding (obsolete GO:1904744)","synonyms":[{"name":"activation of telomere binding","type":"narrow"},{"name":"activation of telomeric DNA binding","type":"narrow"},{"name":"activation of telomeric repeat binding","type":"narrow"},{"name":"positive regulation of telomere binding","type":"exact"},{"name":"positive regulation of telomeric repeat binding","type":"exact"},{"name":"up regulation of telomere binding","type":"exact"},{"name":"up regulation of telomeric DNA binding","type":"exact"},{"name":"up regulation of telomeric repeat binding","type":"exact"},{"name":"up-regulation of telomere binding","type":"exact"},{"name":"up-regulation of telomeric DNA binding","type":"exact"},{"name":"up-regulation of telomeric repeat binding","type":"exact"},{"name":"upregulation of telomere binding","type":"exact"},{"name":"upregulation of telomeric DNA binding","type":"exact"},{"name":"upregulation of telomeric repeat binding","type":"exact"}],"termid":"GO:1904744"}


id: MONDO:0012656
data:
  {"annotated_genes":["SJAG_01863"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87266],"is_not":false,"summary":null,"term":"MONDO:0012656"}]},"cv_name":"mondo","definition":"Lethal congenital contracture syndrome type 3 is a rare arthrogryposis syndrome characterized by clinical features identical to Lethal congenital contracture syndrome type 2 (i.e. multiple congenital contactures (typically extended elbows and flexed knees), micrognathia, anterior horn cells degeneration, skeletal muscle atrophy (mainly in the lower limbs), in the absence of hydrops, pterygia or bone fractures), but without bladder enlargement.","definition_xrefs":["Orphanet:137783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"lethal congenital contracture syndrome","termid":"MONDO:0017436"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01863":null},"genotype_count":0,"is_obsolete":false,"name":"lethal congenital contracture syndrome 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:369555","MESH:C566961","OMIM:611369","SCTID:715420005","GARD:12644","UMLS:C1969655","DOID:0060653"],"synonyms":[{"name":"Israeli Bedouin type B multiple contracture syndrome","type":"exact"},{"name":"LCCS3","type":"exact"},{"name":"PIP5K1C lethal congenital contracture syndrome","type":"exact"},{"name":"lethal congenital contractural syndrome 3","type":"exact"},{"name":"lethal congenital contracture syndrome 3","type":"exact"},{"name":"lethal congenital contracture syndrome caused by mutation in PIP5K1C","type":"exact"},{"name":"lethal congenital contracture syndrome type 3","type":"exact"},{"name":"multiple contracture syndrome, Israeli Bedouin type B","type":"related"}],"termid":"MONDO:0012656","terms_by_termid":{"MONDO:0012656":null},"xrefs":{"Monarch":{"xref_id":"0012656"}}}


id: PBO:0063600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 12 pseudogene 1","termid":"PBO:0063600"}


id: GO:1905837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a triterpenoid stimulus.","definition_xrefs":["GOC:TermGenie","PMID:28078994","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"response to triterpenoid","termid":"GO:1905836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to triterpenoid","termid":"GO:1905837"}


id: PBO:0078253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 28","termid":"PBO:0078253"}


id: MONDO:0020759
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"childhood absence epilepsy","termid":"MONDO:0010826"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, childhood absence, susceptibility to, 1","secondary_identifiers":["MEDGEN:325057","OMIM:600131","UMLS:C1838604"],"synonyms":[{"name":"ECA1","type":"exact"},{"name":"epilepsy, childhood absence, 1","type":"exact"},{"name":"epilepsy, childhood absence, susceptibility to, 1","type":"exact"}],"termid":"MONDO:0020759","xrefs":{"Monarch":{"xref_id":"0020759"}}}


id: FYPO:0002674
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plasma membrane is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell periphery","termid":"FYPO:0005572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to plasma membrane","synonyms":[{"name":"normal protein localisation to plasma membrane","type":"exact"},{"name":"normal protein localization to plasma membrane during mitotic cell cycle","type":"related"},{"name":"normal protein localization to plasma membrane during vegetative growth","type":"exact"}],"termid":"FYPO:0002674"}


id: PBO:0062396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 18 pseudogene","termid":"PBO:0062396"}


id: MONDO:1011463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alzheimer disease that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Alzheimer disease, non-human animal","termid":"MONDO:1011443"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alzheimer disease, sheep","secondary_identifiers":["OMIA:000033-9940"],"termid":"MONDO:1011463","xrefs":{"Monarch":{"xref_id":"1011463"}}}


id: GO:0010162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A dormancy process in which dormancy (sometimes called a dormant state) is induced, maintained or broken in a seed. Seed dormancy is a suspension of most physiological activity and growth in a seed, including the embryo contained therein, that can be reactivated. It often requires special conditions for reactivation, such as specific temperature, scarification, or leaching of inhibitors.","definition_xrefs":["ISBN:9781405139830","GOC:PO_curators","GOC:lr","PO_REF:00009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"},{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"seed maturation","termid":"GO:0010431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seed dormancy process","secondary_identifiers":["Wikipedia:Seed#Seed_dormancy_and_protection"],"synonyms":[{"name":"seed dormancy","type":"related"}],"termid":"GO:0010162"}


id: GO:0061845
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The location where a secondary projection arises from a neuron projection.","definition_xrefs":["PMID:25586189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"neuron projection","termid":"GO:0043005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"neuron projection branch point","termid":"GO:0061845"}


id: FYPO:0003895
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of rotenone than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0002682","FYPO:0000139"],"is_obsolete":false,"name":"resistance to rotenone","synonyms":[{"name":"resistance to rotenone during mitotic cell cycle","type":"related"},{"name":"resistance to rotenone during vegetative growth","type":"exact"},{"name":"resistant to rotenone","type":"exact"}],"termid":"FYPO:0003895"}


id: GO:0098638
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any laminin protein binding that occurs as part of cell-matrix adhesion.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin binding","termid":"GO:0043236"},{"relation_name":"is_a","term_name":"cell-matrix adhesion mediator activity","termid":"GO:0098634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098631"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0098631","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"laminin binding involved in cell-matrix adhesion","termid":"GO:0098638"}


id: _global:translation_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X is translation of Y if Y is translated by ribosome to create X.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation_of","termid":"_global:translation_of"}


id: PBO:0072761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein A12","termid":"PBO:0072761"}


id: MONDO:0016944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 7p duplication is a chromosome abnormality that occurs when there is an extra copy of genetic material on the short arm (p) of chromosome 7. The severity of the condition and the signs and symptoms depend on the size and location of the duplication and which genes are involved. Features that often occur in people with chromosome 7p duplication include developmental delay, intellectual disability, behavioral problems and distinctive facial features. Most cases are not inherited, but people can pass the duplication on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0005355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 7","termid":"MONDO:0016928"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the short arm of chromosome 7","secondary_identifiers":["icd11.foundation:79901143","GARD:5355","Orphanet:262749","MEDGEN:162875","MESH:C537819","UMLS:C0795820"],"synonyms":[{"name":"7p duplication","type":"related"},{"name":"7p trisomy","type":"related"},{"name":"Duplication 7p","type":"related"},{"name":"chromosome 7p duplication","type":"related"},{"name":"partial duplication of chromosome 7p","type":"exact"},{"name":"partial duplication of the short arm of chromosome type 7","type":"exact"},{"name":"partial trisomy 7p","type":"related"},{"name":"partial trisomy of chromosome 7p","type":"exact"},{"name":"partial trisomy of the short arm of chromosome 7","type":"exact"},{"name":"trisomy 7p","type":"related"}],"termid":"MONDO:0016944","xrefs":{"Monarch":{"xref_id":"0016944"}}}


id: PBO:0077633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and ubiquitin like domain containing 1","termid":"PBO:0077633"}


id: PR:Q10067
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An origin recognition complex subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00791","PRO:DNx","PANTHER:PTHR12748:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H1.01c","secondary_identifiers":["UniProtKB:Q10067"],"synonyms":[{"name":"Spom972h-ORC3","type":"exact"}],"termid":"PR:Q10067"}


id: GO:0005989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lactose, the disaccharide galactopyranosyl-glucose.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactose metabolic process","termid":"GO:0005988"},{"relation_name":"is_a","term_name":"disaccharide biosynthetic process","termid":"GO:0046351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"lactose biosynthetic process","secondary_identifiers":["Reactome:R-HSA-5653890"],"synonyms":[{"name":"lactose anabolism","type":"exact"},{"name":"lactose biosynthesis","type":"exact"},{"name":"lactose formation","type":"exact"},{"name":"lactose synthesis","type":"exact"}],"termid":"GO:0005989"}


id: PBO:0064654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRF interacting protein alpha 4","termid":"PBO:0064654"}


id: FYPO:0002265
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of galactomannan measured in the cell wall is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased galactomannan level","termid":"FYPO:0001195"},{"relation_name":"is_a","term_name":"decreased cell wall polysaccharide level","termid":"FYPO:0002266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cell wall galactomannan level","synonyms":[{"name":"decreased cell wall galactomannan accumulation","type":"related"},{"name":"decreased cell wall galactomannan level during mitotic cell cycle","type":"related"},{"name":"decreased cell wall galactomannan level during vegetative growth","type":"exact"},{"name":"reduced cell wall galactomannan level","type":"exact"}],"termid":"FYPO:0002265"}


id: PBO:0072168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15 pseudogene 5","termid":"PBO:0072168"}


id: PBO:0061463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 0 group B member 1","termid":"PBO:0061463"}


id: GO:1900496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of butyryl-CoA biosynthetic process from acetyl-CoA.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of fatty acid biosynthetic process","termid":"GO:0045723"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"positive regulation of phosphate metabolic process","termid":"GO:0045937"},{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"regulation of butyryl-CoA biosynthetic process from acetyl-CoA","termid":"GO:1900494"},{"relation_name":"positively_regulates","term_name":"butyryl-CoA biosynthetic process from acetyl-CoA","termid":"GO:0044579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629","GO:0006790","GO:0055086"],"is_obsolete":false,"name":"positive regulation of butyryl-CoA biosynthetic process from acetyl-CoA","synonyms":[{"name":"activation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"activation of butyryl-CoA biosynthetic process from acetyl-CoA","type":"narrow"},{"name":"positive regulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"up regulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"up regulation of butyryl-CoA biosynthetic process from acetyl-CoA","type":"exact"},{"name":"up-regulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"up-regulation of butyryl-CoA biosynthetic process from acetyl-CoA","type":"exact"},{"name":"upregulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"upregulation of butyryl-CoA biosynthetic process from acetyl-CoA","type":"exact"}],"termid":"GO:1900496"}


id: MONDO:0700184
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A T-cell leukemia in which there is a persistent increase in the number of large granular lymphocytes in the peripheral blood and occurring in a cat.","definition_xrefs":["NCIT:C135724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feline neoplasm","termid":"MONDO:0700175"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feline large granular lymphocyte lymphoma","termid":"MONDO:0700184","xrefs":{"Monarch":{"xref_id":"0700184"}}}


id: MOD:01941
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks an aspartic acid and the following glycine residue with the formation of (2-aminosuccinimidyl)pentanedioic acid and the loss of a water molecule.","definition_xrefs":["RESID:AA0593#ASP"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-(2-aminosuccinimidyl)pentanedioic acid","termid":"MOD:01946"},{"relation_name":"is_a","term_name":"crosslinked L-aspartic acid residue","termid":"MOD:02043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-(2-aminosuccinimidyl)pentanedioic acid (Asp)","synonyms":[{"name":"(4S)-4-[(3S)-3-amino-2,5-dioxopyrrolidin-1-yl]-5-oxopentanoic acid","type":"exact"},{"name":"2-(2-aminosuccinimidyl)pentanedioic acid","type":"exact"},{"name":"aspartimide glutamic acid","type":"exact"}],"termid":"MOD:01941"}


id: GO:0052660
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-propane-1,2-diol + NAD+ = (R)-lactaldehyde + NADH + H+.","definition_xrefs":["RHEA:23872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactaldehyde reductase activity","termid":"GO:0008912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"R-lactaldehyde reductase activity","secondary_identifiers":["KEGG_REACTION:R03080","MetaCyc:RXN-8641"],"synonyms":[{"name":"(R)-propane-1,2-diol:NAD+ oxidoreductase activity","type":"related"},{"name":"D-lactaldehyde:propanediol oxidoreductase activity","type":"related"}],"termid":"GO:0052660"}


id: MONDO:0014486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any intellectual disability-expressive aphasia-facial dysmorphism syndrome in which the cause of the disease is a mutation in the ZMYND11 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"intellectual disability, autosomal dominant 29","termid":"MONDO:0014482"},{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 30","secondary_identifiers":["MEDGEN:863604","UMLS:C4015167","GARD:13136","DOID:0070060","OMIM:616083"],"synonyms":[{"name":"MRD30","type":"exact"},{"name":"ZMYND11 intellectual disability-expressive aphasia-facial dysmorphism syndrome","type":"exact"},{"name":"autosomal dominant intellectual disability 30","type":"exact"},{"name":"autosomal dominant mental retardation 30","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 30","type":"related"},{"name":"intellectual disability, autosomal dominant 30","type":"exact"},{"name":"intellectual disability, autosomal dominant type 30","type":"exact"},{"name":"intellectual disability-expressive aphasia-facial dysmorphism syndrome caused by mutation in ZMYND11","type":"exact"},{"name":"mental retardation, autosomal dominant 30","type":"related"},{"name":"mental retardation, autosomal dominant type 30","type":"exact"}],"termid":"MONDO:0014486","xrefs":{"Monarch":{"xref_id":"0014486"}}}


id: MONDO:0011303
data:
  {"annotated_genes":["SJAG_04621"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86878],"is_not":false,"summary":null,"term":"MONDO:0011303"}]},"cv_name":"mondo","definition":"Any focal segmental glomerulosclerosis in which the cause of the disease is a mutation in the ACTN4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited focal segmental glomerulosclerosis","termid":"MONDO:0005363"},{"relation_name":"is_a","term_name":"familial idiopathic steroid-resistant nephrotic syndrome","termid":"MONDO:0019006"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"focal segmental glomerulosclerosis 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1636833","OMIM:603278","Orphanet:93213","DOID:0111128","MESH:C538457","UMLS:C4551527","GARD:15353"],"synonyms":[{"name":"ACTN4 focal segmental glomerulosclerosis","type":"exact"},{"name":"FSGS1","type":"exact"},{"name":"familial idiopathic steroid-resistant nephrotic syndrome with focal segmental glomerulosclerosis","type":"exact"},{"name":"familial idiopathic steroid-resistant nephrotic syndrome with focal segmental hyalinosis","type":"related"},{"name":"focal segmental glomerulosclerosis 1","type":"exact"},{"name":"focal segmental glomerulosclerosis caused by mutation in ACTN4","type":"exact"},{"name":"focal segmental glomerulosclerosis type 1","type":"exact"},{"name":"glomerulosclerosis, focal segmental, 1","type":"related"}],"termid":"MONDO:0011303","terms_by_termid":{"MONDO:0011303":null},"xrefs":{"Monarch":{"xref_id":"0011303"}}}


id: PBO:0074722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 80B","termid":"PBO:0074722"}


id: SO:0000589
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding a signal recognition particle RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nc_primary_transcript","termid":"SO:0000483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP_RNA_primary_transcript","synonyms":[{"name":"SRP RNA primary transcript","type":"exact"}],"termid":"SO:0000589"}


id: PBO:0069709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 989, pseudogene","termid":"PBO:0069709"}


id: PR:000085736
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription elongation factor spt5 (Schizosaccharomyces pombe) that lacks phosphorylation on the Thr residue of at least six C-terminal domain TPAWN consensus sequences.","definition_xrefs":["PMID:24939935","PomBase:VW","PRO:DAN","PMID:11893740"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spt5/UnPhos(CTD-T1)","pombase_gene_id":"SPAC23C4.19","synonyms":[{"name":"PomBase_original_PRO_term_name: transcription elongation factor spt5 unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-spt5/UnPhos:1","type":"exact"},{"name":"spt5/UnPhos(CTD-T1)","type":"exact"}],"termid":"PR:000085736"}


id: GO:1900280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of CD4-positive, alpha-beta T cell costimulation.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of CD4-positive, alpha-beta T cell costimulation","termid":"GO:1900279"},{"relation_name":"is_a","term_name":"negative regulation of T cell costimulation","termid":"GO:2000524"},{"relation_name":"negatively_regulates","term_name":"CD4-positive, alpha-beta T cell costimulation","termid":"GO:0035783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of CD4-positive, alpha-beta T cell costimulation","synonyms":[{"name":"down regulation of CD4-positive, alpha beta T cell costimulation","type":"exact"},{"name":"down-regulation of CD4-positive, alpha beta T cell costimulation","type":"exact"},{"name":"downregulation of CD4-positive, alpha beta T cell costimulation","type":"exact"},{"name":"inhibition of CD4-positive, alpha beta T cell costimulation","type":"narrow"},{"name":"negative regulation of CD4-positive, alpha beta T cell costimulation","type":"exact"}],"termid":"GO:1900280"}


id: MONDO:0012084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aromatic L-amino acid decarboxylase deficiency is a very rare, severe, genetic neurometabolic disorder associated with clinical manifestations related to underproduction of serotonin and dopamine, mainly hypotonia, hypokinesia, ptosis oculogyric crises, and signs of autonomic dysfunction.","definition_xrefs":["Orphanet:35708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of catecholamine synthesis","termid":"MONDO:0017759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"aromatic L-amino acid decarboxylase deficiency","secondary_identifiers":["NORD:2010","NCIT:C142085","NANDO:1200988","GARD:770","MESH:C537437","DOID:0090123","SCTID:237922009","ICD10CM:E70.81","OMIM:608643","UMLS:C1291564","NANDO:2200596","icd11.foundation:1134258245","ICD9:270.8","MEDGEN:220945"],"synonyms":[{"name":"AADC deficiency","type":"exact"},{"name":"Aadc deficiency","type":"related"},{"name":"DDC deficiency","type":"related"},{"name":"Dopa decarboxylase deficiency","type":"related"},{"name":"aromatic L-amino acid decarboxylase deficiency","type":"exact"},{"name":"aromatic L-amino-acid decarboxylase deficiency","type":"exact"},{"name":"aromatic amino acid decarboxylase deficiency","type":"related"}],"termid":"MONDO:0012084","xrefs":{"Monarch":{"xref_id":"0012084"}}}


id: GO:0047213
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: anthocyanidin + UDP-D-glucose = anthocyanidin-3-O-D-glucoside + UDP.","definition_xrefs":["MetaCyc:2.4.1.115-RXN","EC:2.4.1.115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"anthocyanidin 3-O-glucosyltransferase activity","secondary_identifiers":["RHEA:20093"],"synonyms":[{"name":"3-GT activity","type":"related"},{"name":"UDP-D-glucose:anthocyanidin 3-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:anthocyanidin 3-O-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:anthocyanidin/flavonol 3-O-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:cyanidin-3-O-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-anthocyanidin 3-O-glucosyltransferase activity","type":"related"}],"termid":"GO:0047213"}


id: MONDO:0006707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0006707 (obsolete MONDO:0006707)","termid":"MONDO:0006707","xrefs":{"Monarch":{"xref_id":"0006707"}}}


id: GO:1903442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipoic acid stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","GOC:sl","PMID:23232760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fatty acid","termid":"GO:0070542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to lipoic acid","termid":"GO:1903442"}


id: MONDO:0007323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chondronectin","secondary_identifiers":["UMLS:C3887693","MEDGEN:854532","OMIM:118670"],"synonyms":[{"name":"Chondronectin","type":"exact"}],"termid":"MONDO:0007323","xrefs":{"Monarch":{"xref_id":"0007323"}}}


id: PBO:0001272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate phosphatase (predicted)","termid":"PBO:0001272"}


id: PBO:0041407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 6 open reading frame 136","termid":"PBO:0041407"}


id: PR:O94308
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A COP9 signalosome complex subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03959","PANTHER:PTHR14145:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome complex subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.03c","secondary_identifiers":["UniProtKB:O94308"],"synonyms":[{"name":"CSN complex subunit 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SGN1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GPS1","type":"exact"}],"termid":"PR:O94308"}


id: PBO:0086096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein proposed to be associated with the nuclear pore complex; null mutant is viable, displays elevated frequency of mitochondrial genome loss and is sensitive to freeze-thaw stress","termid":"PBO:0086096"}


id: PBO:0057782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2909","termid":"PBO:0057782"}


id: GO:0071654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of chemokine (C-C motif) ligand 1.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-C motif) ligand 1 production","termid":"GO:0071652"},{"relation_name":"positively_regulates","term_name":"chemokine (C-C motif) ligand 1 production","termid":"GO:0071610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of chemokine (C-C motif) ligand 1 production","synonyms":[{"name":"positive regulation of CCL1 production","type":"exact"},{"name":"positive regulation of T cell activation 3 production","type":"exact"},{"name":"positive regulation of TCA-3 production","type":"exact"}],"termid":"GO:0071654"}


id: GO:0032933
data:
  {"annotated_genes":["SJAG_02104","SJAG_03302","SJAG_02703","SJAG_00718","SJAG_01657","SJAG_00642","SJAG_00293","SJAG_05286","SJAG_03345","SJAG_04151","SJAG_02682","SJAG_04384","SJAG_01253","SJAG_01150","SJAG_04573","SJAG_01307","SJAG_05304","SJAG_03501","SJAG_03568","SJAG_04018","SJAG_01585","SJAG_01632"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64740,66040,70475,90799,91080,91467,94455,95699,103927,105792,114421,114674,118251,120101,120320],"is_not":false,"summary":null,"term":"GO:0032933"},{"annotations":[93052,113565,107724],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2000639"},{"annotations":[62292,115294,115296,80170],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2000640"}]},"cv_name":"biological_process","definition":"The series of molecular signals from the endoplasmic reticulum to the nucleus generated as a consequence of decreased levels of one or more sterols (and in some yeast, changes in oxygen levels) and which proceeds through activation of a sterol response element binding transcription factor (SREBP) to result in up-regulation of target gene transcription.","definition_xrefs":["GOC:bf","GOC:mah","PMID:12923525","GOC:signaling","PMID:22017871","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER-nucleus signaling pathway","termid":"GO:0006984"},{"relation_name":"is_a","term_name":"cellular response to sterol depletion","termid":"GO:0071501"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00293":null,"SJAG_00642":null,"SJAG_00718":null,"SJAG_01150":null,"SJAG_01253":null,"SJAG_01307":null,"SJAG_01585":null,"SJAG_01632":null,"SJAG_01657":null,"SJAG_02104":null,"SJAG_02682":null,"SJAG_02703":null,"SJAG_03302":null,"SJAG_03345":null,"SJAG_03501":null,"SJAG_03568":null,"SJAG_04018":null,"SJAG_04151":null,"SJAG_04384":null,"SJAG_04573":null,"SJAG_05286":null,"SJAG_05304":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"SREBP signaling pathway","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0030967","GO:0006994","GO:0035104"],"synonyms":[{"name":"ER to nucleus sterol response pathway","type":"exact"},{"name":"ER-nuclear sterol response pathway","type":"exact"},{"name":"SREBP signalling","type":"exact"},{"name":"SREBP target gene transcriptional activation","type":"exact"},{"name":"SREBP-mediated signaling pathway","type":"related"},{"name":"SREBP-mediated signalling pathway","type":"exact"},{"name":"activation of sterol regulatory element binding protein target gene transcription","type":"narrow"},{"name":"endoplasmic reticulum to nucleus sterol response pathway","type":"exact"},{"name":"endoplasmic reticulum-nuclear sterol response pathway","type":"exact"},{"name":"positive regulation of sterol regulatory element binding protein target gene transcription","type":"exact"},{"name":"positive regulation of sterol regulatory element binding protein target gene transcription involved in sterol depletion response","type":"exact"},{"name":"positive regulation of transcription via sterol regulatory element binding","type":"narrow"},{"name":"positive regulation of transcription via sterol regulatory element binding involved in ER-nuclear sterol response pathway","type":"narrow"},{"name":"sterol depletion response, SREBP target gene transcriptional activation","type":"exact"},{"name":"sterol regulatory element binding protein target gene transcriptional activation","type":"broad"},{"name":"sterol response element binding protein signaling pathway","type":"exact"},{"name":"stimulation of sterol regulatory element binding protein target gene transcription","type":"narrow"},{"name":"up regulation of sterol regulatory element binding protein target gene transcription","type":"exact"},{"name":"up-regulation of sterol regulatory element binding protein target gene transcription","type":"exact"},{"name":"upregulation of sterol regulatory element binding protein target gene transcription","type":"exact"}],"termid":"GO:0032933","terms_by_termid":{"GO:0032933":null,"GO:2000639":null,"GO:2000640":null}}


id: GO:0052671
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: geranylgeraniol + nucleoside triphosphate = all-trans-geranyl-geranyl monophosphate + nucleoside diphosphate.","definition_xrefs":["GOC:kd"],"gene_count":0,"genotype_count":0,"name":"obsolete geranylgeraniol kinase activity (obsolete GO:0052671)","synonyms":[{"name":"geranylgeraniol phosphotransferase activity","type":"exact"}],"termid":"GO:0052671"}


id: GO:0031422
data:
  {"annotated_genes":["SJAG_02262","SJAG_04816","SJAG_03898"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72169,96692,97822],"is_not":false,"summary":null,"term":"GO:0031422"}]},"cv_name":"cellular_component","definition":"A complex containing a RecQ family helicase and a topoisomerase III homologue (a member of the topoisomerase type IA subfamily); may also include one or more additional proteins; conserved from E. coli to human.","definition_xrefs":["GOC:bhm","PMID:15889139","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA helicase complex","termid":"GO:0033202"},{"relation_name":"part_of","term_name":"chromosome","termid":"GO:0005694"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02262":null,"SJAG_03898":null,"SJAG_04816":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"RecQ family helicase-topoisomerase III complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"RecQ helicase-Topo III complex","type":"exact"},{"name":"Sgs1-Top3 complex","type":"narrow"}],"termid":"GO:0031422","terms_by_termid":{"GO:0031422":null}}


id: PBO:0084767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial NADH kinase; phosphorylates NADH; also phosphorylates NAD(+) with lower specificity; required for the response to oxidative stress","termid":"PBO:0084767"}


id: PBO:0039268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALDOA pseudogene 1","termid":"PBO:0039268"}


id: SO:0000053
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence_variant_effect which changes the regulatory region of a gene.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000053 sequence_variant_affecting_regulatory_region (obsolete SO:0000053)","synonyms":[{"name":"mutation affecting regulatory region","type":"related"},{"name":"sequence variant affecting regulatory region","type":"exact"}],"termid":"SO:0000053"}


id: PR:000028947
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thioredoxin reduced form in Schizosaccharomyces pombe. The reduced Cys are Cys-30 and Cys-33 in UniProtKB:O14463.","definition_xrefs":["PMID:22245228","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trx1/Red+","pombase_gene_id":"SPAC7D4.07c","synonyms":[{"name":"PomBase_original_PRO_term_name: thioredoxin-1 reduced form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-TXN/Red+","type":"exact"},{"name":"trx1/Red+","type":"exact"}],"termid":"PR:000028947"}


id: PBO:0086323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with similarity to hydroxymethylpyrimidine phosphate kinases; member of a gene family with THI20 and THI21; not required for thiamine biosynthesis; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively","termid":"PBO:0086323"}


id: PBO:0031418
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_recombination","termid":"PBO:0031418"}


id: PBO:0066304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol binding protein 7","termid":"PBO:0066304"}


id: SO:0001361
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Five_methoxycarbonylmethyl_2_prime_O_methyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methoxycarbonylmethyl_two_prime_O_methyluridine","secondary_identifiers":["RNAMOD:069"],"synonyms":[{"name":"5-methoxycarbonylmethyl-2'-O-methyluridine","type":"exact"},{"name":"five methoxycarbonylmethyl two prime O methyluridine","type":"exact"},{"name":"mcm5Um","type":"exact"}],"termid":"SO:0001361"}


id: PBO:0073544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain and tetratricopeptide repeats 2","termid":"PBO:0073544"}


id: PBO:0047914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, 5-azacytidine type, common, fra(9)(q12)","termid":"PBO:0047914"}


id: PBO:0079671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 V2 pseudogene 1","termid":"PBO:0079671"}


id: PBO:0053664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 841","termid":"PBO:0053664"}


id: PBO:0028412
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_tert-butyl_hydroperoxide","termid":"PBO:0028412"}


id: PBO:0090682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Thioredoxin reductase superfamily protein","termid":"PBO:0090682"}


id: PR:Q9P332
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of any of the following genes in Schizosaccharomyces pombe 972h-: SPAC750.04c/SPAC977.02.","definition_xrefs":["UniProtKB:Q9P332","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0742 protein C750.04c/C977.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC977.02","synonyms":[{"name":"Spom972h-SPAC977.02","type":"exact"}],"termid":"PR:Q9P332"}


id: MONDO:0011424
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Carney's triad is a rare non-hereditary condition characterized by gastrointestinal stromal tumors (GIST, intramural mesenchymal tumors of the gastrointestinal tract with neuronal or neural crest cell origin), pulmonary chondromas and extraadrenal paragangliomas.","definition_xrefs":["Orphanet:139411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple polyglandular tumor","termid":"MONDO:0015079"},{"relation_name":"is_a","term_name":"neoplastic syndrome","termid":"MONDO:0021058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Carney triad","secondary_identifiers":["MESH:C565803","NCIT:C94833","OMIM:604287","GARD:10924","MEDGEN:388099","SCTID:733492003","icd11.foundation:1771169701","UMLS:C1858592"],"synonyms":[{"name":"Carney triad","type":"exact"},{"name":"gastric leiomyosarcoma, pulmonary chondroma, and extraadrenal paraganglioma","type":"related"}],"termid":"MONDO:0011424","xrefs":{"Monarch":{"xref_id":"0011424"}}}


id: PBO:0035876
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_ubiquitination_during_vegetative_growth","termid":"PBO:0035876"}


id: GO:1905297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neural crest cell fate specification.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:rl","GOC:TermGenie","PMID:15073157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell fate specification","termid":"GO:0042660"},{"relation_name":"is_a","term_name":"positive regulation of neural crest formation","termid":"GO:0090300"},{"relation_name":"is_a","term_name":"positive regulation of neural crest cell differentiation","termid":"GO:1905294"},{"relation_name":"is_a","term_name":"regulation of neural crest cell fate specification","termid":"GO:1905295"},{"relation_name":"positively_regulates","term_name":"neural crest cell fate specification","termid":"GO:0014036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neural crest cell fate specification","synonyms":[{"name":"activation of neural crest cell fate specification","type":"narrow"},{"name":"up regulation of neural crest cell fate specification","type":"exact"},{"name":"up-regulation of neural crest cell fate specification","type":"exact"},{"name":"upregulation of neural crest cell fate specification","type":"exact"}],"termid":"GO:1905297"}


id: GO:0033419
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CUA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"CUA codon-amino acid adaptor activity","synonyms":[{"name":"CTA codon-amino acid adaptor activity","type":"exact"},{"name":"leucine tRNA","type":"related"}],"termid":"GO:0033419"}


id: PBO:0064641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphopantothenoylcysteine synthetase","termid":"PBO:0064641"}


id: PBO:0073479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3GL interacting endocytic adaptor 1","termid":"PBO:0073479"}


id: GO:0014003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of an oligodendrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. An oligodendrocyte is a type of glial cell involved in myelinating the axons in the central nervous system.","definition_xrefs":["GOC:dgh","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell development","termid":"GO:0021782"},{"relation_name":"part_of","term_name":"oligodendrocyte differentiation","termid":"GO:0048709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oligodendrocyte development","synonyms":[{"name":"oligodendrocyte cell development","type":"exact"}],"termid":"GO:0014003"}


id: GO:1900033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of trichome patterning.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell communication","termid":"GO:0010648"},{"relation_name":"is_a","term_name":"negative regulation of signaling","termid":"GO:0023057"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of trichome patterning","termid":"GO:1900032"},{"relation_name":"negatively_regulates","term_name":"trichome patterning","termid":"GO:0048629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of trichome patterning","synonyms":[{"name":"down regulation of trichome distribution","type":"broad"},{"name":"down regulation of trichome pattern biosynthesis","type":"exact"},{"name":"down regulation of trichome pattern formation","type":"exact"},{"name":"down regulation of trichome pattern specification","type":"related"},{"name":"down regulation of trichome patterning","type":"related"},{"name":"down regulation of trichome spacing","type":"exact"},{"name":"down-regulation of trichome distribution","type":"broad"},{"name":"down-regulation of trichome pattern biosynthesis","type":"exact"},{"name":"down-regulation of trichome pattern formation","type":"exact"},{"name":"down-regulation of trichome pattern specification","type":"related"},{"name":"down-regulation of trichome patterning","type":"related"},{"name":"down-regulation of trichome spacing","type":"exact"},{"name":"downregulation of trichome distribution","type":"broad"},{"name":"downregulation of trichome pattern biosynthesis","type":"exact"},{"name":"downregulation of trichome pattern formation","type":"exact"},{"name":"downregulation of trichome pattern specification","type":"related"},{"name":"downregulation of trichome patterning","type":"related"},{"name":"downregulation of trichome spacing","type":"exact"},{"name":"inhibition of trichome distribution","type":"broad"},{"name":"inhibition of trichome pattern biosynthesis","type":"exact"},{"name":"inhibition of trichome pattern formation","type":"exact"},{"name":"inhibition of trichome pattern specification","type":"related"},{"name":"inhibition of trichome patterning","type":"related"},{"name":"inhibition of trichome spacing","type":"exact"},{"name":"negative regulation of trichome distribution","type":"broad"},{"name":"negative regulation of trichome pattern biosynthesis","type":"exact"},{"name":"negative regulation of trichome pattern formation","type":"exact"},{"name":"negative regulation of trichome pattern specification","type":"related"},{"name":"negative regulation of trichome spacing","type":"exact"}],"termid":"GO:1900033"}


id: MONDO:0000453
data:
  {"annotated_genes":["SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859368"}]},"cv_name":"mondo","definition":"A genetic disease of the electrical system of the heart that consists of a constellation of signs and symptoms, consisting of a short QT interval on an EKG (< 300 ms) that does not significantly change with heart rate, tall and peaked T waves, and a structurally normal heart. Short QT syndrome appears to be inherited in an autosomal dominant pattern, and a few affected families have been identified","definition_xrefs":["Wikipedia:Short_QT_syndrome"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart conduction disease","termid":"MONDO:0000992"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"short QT syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:609620","icd11.foundation:553392015","NCIT:C71060","MEDGEN:378835","Orphanet:51083","ICD9:426.89","SCTID:698272007","GARD:16650","DOID:0050793","MESH:C580439","NORD:2019","UMLS:C2348199"],"synonyms":[{"name":"familial short QT syndrome","type":"related"},{"name":"short QT syndrome","type":"exact"},{"name":"ventricular arrhythmia associated with short QT syndrome","type":"exact"}],"termid":"MONDO:0000453","terms_by_termid":{"MONDO:0859368":null},"xrefs":{"Monarch":{"xref_id":"0000453"}}}


id: PBO:0000288
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil","termid":"PBO:0000288"}


id: GO:0070745
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is composed of an interleukin-12 alpha subunit (p35, product of the IL12A gene) and an EBI3 subunit and is secreted into the extracellular space.","definition_xrefs":["PMID:19161428","PMID:19161429","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005576"],"is_obsolete":false,"name":"interleukin-35 complex","synonyms":[{"name":"EBI3","type":"narrow"},{"name":"IL-35 complex","type":"exact"},{"name":"IL12A","type":"narrow"},{"name":"p35","type":"narrow"}],"termid":"GO:0070745"}


id: PBO:0040758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain expressed associated with NEDD4 1","termid":"PBO:0040758"}


id: MONDO:0018826
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare acquired demyelinating polyneuropathy characterized by asymmetrical distal weakness of the upper or lower extremities and motor dysfunction with adult onset. It is considered to be a variant of chronic inflammatory demyelinating polyneuropathy.","definition_xrefs":["Orphanet:48162"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Guillain-Barre syndrome, familial","termid":"MONDO:0007691"},{"relation_name":"is_a","term_name":"chronic inflammatory demyelinating polyradiculoneuropathy","termid":"MONDO:0006702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005244"],"is_obsolete":false,"name":"Lewis-Sumner syndrome","secondary_identifiers":["MedDRA:10065580","GARD:13070","UMLS:C1695985","MEDGEN:798498"],"synonyms":[{"name":"MADSAM","type":"exact"},{"name":"multifocal acquired demyelinating sensory and motor neuropathy","type":"exact"}],"termid":"MONDO:0018826","xrefs":{"Monarch":{"xref_id":"0018826"}}}


id: PBO:0077777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM40 pseudogene 4","termid":"PBO:0077777"}


id: SO:0001426
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A read produced by the polymerase based sequence by synthesis method.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"read","termid":"SO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymerase_synthesis_read","synonyms":[{"name":"polymerase synthesis read","type":"related"}],"termid":"SO:0001426"}


id: GO:1905207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiocyte differentiation.","definition_xrefs":["PMID:23069713","GOC:bc","GOC:TermGenie","GO_REF:0000058","GOC:BHF","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"cardiocyte differentiation","termid":"GO:0035051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiocyte differentiation","synonyms":[{"name":"regulation of cardiac cell differentiation","type":"exact"},{"name":"regulation of heart cell differentiation","type":"exact"}],"termid":"GO:1905207"}


id: GO:0102740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: theobromine + S-adenosyl-L-methionine = H+ + caffeine + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete theobromine:S-adenosyl-L-methionine 1-N-methyltransferase activity (obsolete GO:0102740)","termid":"GO:0102740"}


id: MONDO:0018251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glycogen storage disease due to phosphorylase kinase deficiency (obsolete MONDO:0018251)","secondary_identifiers":["NANDO:1201020","NANDO:2200544"],"termid":"MONDO:0018251","xrefs":{"Monarch":{"xref_id":"0018251"}}}


id: GO:0110005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tRNA C5-cytosine methylation.","definition_xrefs":["GOC:vw","PMID:23074192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tRNA C5-cytosine methylation","termid":"GO:0110003"},{"relation_name":"is_a","term_name":"positive regulation of tRNA methylation","termid":"GO:0110004"},{"relation_name":"positively_regulates","term_name":"tRNA C5-cytosine methylation","termid":"GO:0002946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006399"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006399","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of tRNA C5-cytosine methylation","termid":"GO:0110005"}


id: MONDO:0016597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete generalized pustular psoriasis (obsolete MONDO:0016597)","secondary_identifiers":["NANDO:1200240"],"termid":"MONDO:0016597","xrefs":{"Monarch":{"xref_id":"0016597"}}}


id: MONDO:0008286
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Crossed polysyndactyly is a rare, genetic, congenital limb malformation disorder characterized by unilateral or bilateral postaxial polydactyly in the hands and preaxial polydactyly in the feet, associated with bilateral cutaneous syndactyly of first, second and third toes. Cutaneous syndactyly in hands has also been reported in some patients. There have been no further descriptions in the literature since 1994.","definition_xrefs":["Orphanet:2935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crossed polysyndactyly","secondary_identifiers":["GARD:1617","MESH:C566773","OMIM:175690","UMLS:C1867999","MEDGEN:358112","icd11.foundation:1884305247"],"synonyms":[{"name":"crossed polydactyly","type":"exact"},{"name":"polysyndactyly, crossed","type":"related"}],"termid":"MONDO:0008286","xrefs":{"Monarch":{"xref_id":"0008286"}}}


id: GO:0061417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is under oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.","definition_xrefs":["PMID:9767597","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter in response to oxidative stress (obsolete GO:0061417)","termid":"GO:0061417"}


id: GO:0052426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which an organism effects a change in the structure or function of its symbiont organism, mediated by a substance secreted by a type IV secretion system in the organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by organism of symbiont morphology or physiology via substance secreted by type IV secretion system (obsolete GO:0052426)","synonyms":[{"name":"modification by organism of symbiont morphology or physiology via substance secreted by type IV secretion system","type":"exact"}],"termid":"GO:0052426"}


id: FYPO:0003440
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype observed in the vegetative growth phase of the life cycle in which a cell lyses, i.e. the plasma membrane ruptures and cytoplasm is lost, during cytokinesis. Note that in fission yeast cell lysis, the integrity of the cell wall is also compromised.","definition_xrefs":["PMID:24798735","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell lysis","termid":"FYPO:0000647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"cell lysis during cytokinesis","synonyms":[{"name":"cell lysis during cytokinesis during mitotic cell cycle","type":"related"},{"name":"cell lysis during cytokinesis during vegetative growth","type":"exact"},{"name":"cytolysis during cytokinesis","type":"exact"},{"name":"inviable, lysed cell during cytokinesis","type":"exact"}],"termid":"FYPO:0003440"}


id: PBO:0109965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNX7 divergent transcript","termid":"PBO:0109965"}


id: PBO:0068956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 200, pseudogene","termid":"PBO:0068956"}


id: GO:0110034
data:
  {"annotated_genes":["SJAG_02481","SJAG_01245","SJAG_02426","SJAG_02311","SJAG_00266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93903,94563,102257,109807,118239],"is_not":false,"summary":null,"term":"GO:0110034"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the adenylate cyclase-activating glucose-activated G protein-coupled receptor signaling pathway.","definition_xrefs":["GOC:al","PMID:24297439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway","termid":"GO:0106072"},{"relation_name":"is_a","term_name":"regulation of adenylate cyclase-activating glucose-activated G protein-coupled receptor signaling pathway","termid":"GO:0110033"},{"relation_name":"is_a","term_name":"negative regulation of glucose mediated signaling pathway","termid":"GO:1902660"},{"relation_name":"negatively_regulates","term_name":"adenylate cyclase-activating glucose-activated G protein-coupled receptor signaling pathway","termid":"GO:0010619"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_01245":null,"SJAG_02311":null,"SJAG_02426":null,"SJAG_02481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of adenylate cyclase-activating glucose-activated G protein-coupled receptor signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of adenylate cyclase-activating glucose-activated G-protein coupled receptor signaling pathway","type":"exact"}],"termid":"GO:0110034","terms_by_termid":{"GO:0110034":null}}


id: FYPO:0004542
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at subtelomeric regions is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at subtelomere","termid":"FYPO:0000169"},{"relation_name":"is_a","term_name":"increased gene silencing","termid":"FYPO:0000577"},{"relation_name":"is_a","term_name":"increased chromatin silencing","termid":"FYPO:0004540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased chromatin silencing at subtelomere","secondary_identifiers":["FYPO:0006367"],"synonyms":[{"name":"increased chromatin silencing at subtelomere during mitotic cell cycle","type":"related"},{"name":"increased chromatin silencing at subtelomere during vegetative growth","type":"exact"},{"name":"increased chromatin silencing at telomere","type":"related"}],"termid":"FYPO:0004542"}


id: PBO:0053177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEMD1 antisense RNA 1","termid":"PBO:0053177"}


id: FYPO:0005805
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of movement of one or more proteins within the plasma membrane of the cell tip is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:25837586","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein movement within plasma membrane during vegetative growth","termid":"FYPO:0005804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal rate of protein movement within plasma membrane at cell tip","synonyms":[{"name":"normal rate of protein movement within plasma membrane at cell end","type":"exact"},{"name":"normal rate of protein movement within plasma membrane at cell tip during mitotic cell cycle","type":"related"},{"name":"normal rate of protein movement within plasma membrane at cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0005805"}


id: PR:000035574
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A MAD2:MAD3 complex whose components are encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:KER","PMID:12676091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAD2:MAD3 complex (Schizosaccharomyces pombe 972h-)","synonyms":[{"name":"Spom972h-(MAD2:MAD3)","type":"exact"}],"termid":"PR:000035574"}


id: MONDO:0019565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary von Willebrand disease (VWD) is a hereditary bleeding disorder caused by a genetic anomaly leading to quantitative, structural or functional abnormalities of the Willebrand factor (von Willebrand factor; VWF). Two major groups of VWF deficiency have been defined: quantitative and partial (type 1) or total (type 3), and qualitative (type 2) with several subtypes (2A, 2B, 2M, 2N).","definition_xrefs":["Orphanet:903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"},{"relation_name":"is_a","term_name":"von Willebrand disease (hereditary or acquired)","termid":"MONDO:0024574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hereditary von Willebrand disease","secondary_identifiers":["MESH:C531844","UMLS:C5703318","GARD:7867","icd11.foundation:2112021600","SCTID:234446004","DOID:12531","MedDRA:10047715","MEDGEN:1814986","ICD9:286.4"],"synonyms":[{"name":"congenital von willebrand disease","type":"related"},{"name":"congenital von willebrand's disease","type":"exact"},{"name":"hereditary von Willebrand disease","type":"exact"},{"name":"hereditary von Willebrand disease (hereditary or acquired)","type":"exact"},{"name":"vascular haemophilia","type":"broad"},{"name":"vascular hemophilia","type":"broad"},{"name":"vascular pseudohemophilia","type":"exact"},{"name":"von Willebrand disease","type":"broad"},{"name":"von Willebrand disorder","type":"broad"},{"name":"von Willebrand's disease","type":"related"},{"name":"von Willebrand's-Jurgens' disease","type":"broad"},{"name":"von Willebrand-Jrgens disease","type":"exact"},{"name":"von Willebrand-Jurgens disease","type":"broad"}],"termid":"MONDO:0019565","xrefs":{"Monarch":{"xref_id":"0019565"}}}


id: PBO:0038918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor F5 pseudogene 2","termid":"PBO:0038918"}


id: SO:0000462
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-functional descendant of a functional entity.","definition_xrefs":["SO:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogenic_region","synonyms":[{"name":"pseudogenic region","type":"exact"}],"termid":"SO:0000462"}


id: PBO:0073636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 22, pseudogene","termid":"PBO:0073636"}


id: GO:0008616
data:
  {"annotated_genes":["SJAG_06284","SJAG_00683","SJAG_02179","SJAG_01781"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91495,97608,100399,100400],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0002099"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of queuosines, a series of nucleosides found in position 34 of tRNA and having an additional pentenyl ring added via an NH group to the methyl group of 7-methylguanosine. The pentenyl ring may carry other substituents.","definition_xrefs":["GOC:go_curators","PMID:28208705","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00683":null,"SJAG_01781":null,"SJAG_02179":null,"SJAG_06284":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tRNA queuosine(34) biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"queuosine anabolism","type":"exact"},{"name":"queuosine biosynthesis","type":"exact"},{"name":"queuosine biosynthetic process","type":"exact"},{"name":"queuosine formation","type":"exact"},{"name":"queuosine synthesis","type":"exact"}],"termid":"GO:0008616","terms_by_termid":{"GO:0002099":null}}


id: PBO:0052833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 1-3","termid":"PBO:0052833"}


id: PATO:0001564
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a process inhering in a bearer by virtue of the bearer's processual parts.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extra or missing processual parts","termid":"PATO:0001564"}


id: MONDO:1011017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cerebellar degeneration that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar degeneration, non-human animal","termid":"MONDO:1010243"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar degeneration, domestic cat","secondary_identifiers":["OMIA:001221-9685"],"termid":"MONDO:1011017","xrefs":{"Monarch":{"xref_id":"1011017"}}}


id: GO:1900830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of D-tyrosine.","definition_xrefs":["GOC:TermGenie","PMID:10766779"],"gene_count":0,"genotype_count":0,"name":"obsolete D-tyrosine biosynthetic process (obsolete GO:1900830)","synonyms":[{"name":"D-tyrosine anabolism","type":"exact"},{"name":"D-tyrosine biosynthesis","type":"exact"},{"name":"D-tyrosine formation","type":"exact"},{"name":"D-tyrosine synthesis","type":"exact"}],"termid":"GO:1900830"}


id: MONDO:0010663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of X-linked syndromes characterized by severe intellectual deficit and facial dysmorphism, with variable other features.","definition_xrefs":["Orphanet:73220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATR-X-related syndrome","termid":"MONDO:0016980"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability-hypotonic facies syndrome, X-linked, 1","secondary_identifiers":["DOID:0080982","Orphanet:93974","OMIM:309580","MEDGEN:1676827","MESH:C537445","Orphanet:93973","GARD:3521","SCTID:717763008","Orphanet:93971","Orphanet:93970","Orphanet:93972","SCTID:719212004","UMLS:C4759781"],"synonyms":[{"name":"Carpenter-Waziri syndrome","type":"exact"},{"name":"Chudley Lowry Hoar syndrome","type":"exact"},{"name":"Chudley intellectual disability syndrome","type":"related"},{"name":"Chudley mental retardation syndrome","type":"related"},{"name":"Chudley syndrome 1","type":"related"},{"name":"Chudley-Lowry syndrome","type":"exact"},{"name":"Chudley-Lowry-Hoar syndrome","type":"exact"},{"name":"Holmes-Gang syndrome","type":"exact"},{"name":"JMS","type":"related"},{"name":"Juberg Marsidi syndrome","type":"narrow"},{"name":"Juberg-Marsidi mental retardation syndrome","type":"narrow"},{"name":"Juberg-Marsidi syndrome","type":"narrow"},{"name":"MRXHF1","type":"exact"},{"name":"SFM1","type":"related"},{"name":"SFMS","type":"exact"},{"name":"Smith Fineman Myers syndrome 1","type":"related"},{"name":"Smith-Fineman-Myers syndrome","type":"exact"},{"name":"X-linked hypogonadism gynecomastia intellectual disability","type":"related"},{"name":"X-linked hypogonadism gynecomastia mental retardation","type":"related"},{"name":"X-linked intellectual disability-hypotonic face syndrome","type":"exact"},{"name":"XLMR-hypotonic facies syndrome","type":"exact"},{"name":"intellectual disability Smith Fineman Myers type","type":"related"},{"name":"intellectual disability, X-linked, with growth retardation, deafness, and microgenitalism","type":"related"},{"name":"intellectual disability-hypotonic facies syndrome X-linked, 1","type":"related"},{"name":"intellectual disability-hypotonic facies syndrome, X-linked, 1","type":"exact"},{"name":"intellectual disability-hypotonic facies syndrome, X-linked, type 1","type":"exact"},{"name":"mental retardation Smith Fineman Myers type","type":"related"},{"name":"mental retardation, X-linked, with growth retardation, deafness, and microgenitalism","type":"related"},{"name":"mental retardation-hypotonic facies syndrome X-linked, 1","type":"related"},{"name":"mental retardation-hypotonic facies syndrome, X-linked, 1","type":"related"},{"name":"mental retardation-hypotonic facies syndrome, X-linked, X-linked recessive","type":"exact"},{"name":"mental retardation-hypotonic facies syndrome, X-linked, type 1","type":"exact"},{"name":"mental retradation, X-linked with Growth delay, deafness, microgenitalism","type":"related"}],"termid":"MONDO:0010663","xrefs":{"Monarch":{"xref_id":"0010663"}}}


id: MONDO:0005145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sporadic amyotrophic lateral sclerosis is a amyotrophic lateral sclerosis in which there is no known cause, such as no family history.","definition_xrefs":["EFO:0001357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amyotrophic lateral sclerosis","termid":"MONDO:0004976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"sporadic amyotrophic lateral sclerosis","secondary_identifiers":["MEDGEN:400171","UMLS:C1862941","DOID:0080917"],"termid":"MONDO:0005145","xrefs":{"Monarch":{"xref_id":"0005145"}}}


id: PBO:0062732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily B member 6","termid":"PBO:0062732"}


id: GO:0001073
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to DNA, typically within region of the promoter and transcribed region, to promote readthrough of a transcription termination site and thus extending the length of the RNA transcript produced. Examples of antitermination factors which bind DNA include the lambda Q protein.","definition_xrefs":["GOC:txnOH","PMID:8332211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator activity","termid":"GO:0140110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140110"}],"interesting_parent_ids":["GO:0003674","GO:0140110"],"is_obsolete":false,"name":"transcription antitermination factor activity, DNA binding","synonyms":[{"name":"DNA binding transcription antitermination factor activity","type":"exact"}],"termid":"GO:0001073"}


id: GO:0100019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates cAMP-mediated signaling.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cAMP-mediated signaling by transcription from RNA polymerase II promoter (obsolete GO:0100019)","termid":"GO:0100019"}


id: PBO:0045515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-aminoacyl-tRNA deacylase 1","termid":"PBO:0045515"}


id: MONDO:0009289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glycogen storage disease IC (obsolete MONDO:0009289)","termid":"MONDO:0009289","xrefs":{"Monarch":{"xref_id":"0009289"}}}


id: GO:0045430
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a chalcone = a flavanone.","definition_xrefs":["EC:5.5.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"chalcone isomerase activity","secondary_identifiers":["MetaCyc:CHALCONE-ISOMERASE-RXN"],"synonyms":[{"name":"chalcone--flavonone isomerase activity","type":"related"},{"name":"chalcone-flavanone isomerase activity","type":"exact"},{"name":"flavanone lyase (decyclizing)","type":"related"}],"termid":"GO:0045430"}


id: MONDO:0008562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, congenital limb malformation syndrome characterized by short stature, sparse scalp hair, hypoplastic, proximally-placed thumbs, and skin hyperpigmentation with areas of 'raindrop' depigmentation. Presence of a single, upper central incisor has also been reported. There have been no further descriptions in the literature since 1988.","definition_xrefs":["Orphanet:2251"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"excluded_subClassOf","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thumb deformity-alopecia-pigmentation anomaly syndrome","secondary_identifiers":["UMLS:C1861168","MESH:C566054","Orphanet:79132","GARD:5199","OMIM:188150","MEDGEN:348284"],"synonyms":[{"name":"congenital deformity of the thumb and congenital alopecia","type":"related"},{"name":"hypotrichosis associated with congenital hypoplasia of the thumb","type":"related"},{"name":"sparse hair, short stature, hypoplastic thumbs, single upper central incisor and abnormal skin pigmentation","type":"related"},{"name":"thumb deformity and alopecia","type":"exact"},{"name":"thumb deformity, alopecia, pigmentation anomaly","type":"related"}],"termid":"MONDO:0008562","xrefs":{"Monarch":{"xref_id":"0008562"}}}


id: PBO:0067034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 48, pseudogene","termid":"PBO:0067034"}


id: PBO:0091495
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae HAL3","termid":"PBO:0091495"}


id: PR:P33886
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A myosin light chain kinase 2, skeletal/cardiac muscle that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase wis1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.07c","secondary_identifiers":["UniProtKB:P33886"],"synonyms":[{"name":"SPBC409.07c","type":"related"},{"name":"Spom972h-MYLK2","type":"exact"},{"name":"protein kinase sty2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"spc2","type":"related"},{"name":"sty2","type":"related"}],"termid":"PR:P33886"}


id: MONDO:0700242
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinopathy caused by a heterozygous variant in the IMPG2 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"IMPG2-related dominant retinopathy","synonyms":[{"name":"IMPG2-related dominant retinopathy","type":"exact"}],"termid":"MONDO:0700242","xrefs":{"Monarch":{"xref_id":"0700242"}}}


id: PBO:0055973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and IQ motif containing 3","termid":"PBO:0055973"}


id: MONDO:0009840
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Partington-Anderson syndrome","secondary_identifiers":["OMIM:260555","MESH:C536299","Orphanet:2829","UMLS:C1850075","MEDGEN:376699"],"synonyms":[{"name":"Partington-Anderson syndrome","type":"exact"}],"termid":"MONDO:0009840","xrefs":{"Monarch":{"xref_id":"0009840"}}}


id: PBO:0071517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 20","termid":"PBO:0071517"}


id: PR:Q9URV0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tho4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URV0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C106.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.12c","synonyms":[{"name":"Spom972h-tho4","type":"exact"}],"termid":"PR:Q9URV0"}


id: MONDO:0003376
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant smooth muscle neoplasm, arising from the mediastinum. It is characterized by a proliferation of neoplastic spindle cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mediastinum sarcoma","termid":"MONDO:0002852"},{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mediastinum leiomyosarcoma","secondary_identifiers":["MEDGEN:235310","DOID:5292","UMLS:C1334660","NCIT:C6619"],"synonyms":[{"name":"leiomyosarcoma of mediastinum","type":"exact"},{"name":"leiomyosarcoma of the mediastinum","type":"exact"},{"name":"mediastinal leiomyosarcoma","type":"exact"},{"name":"mediastinum leiomyosarcoma","type":"exact"}],"termid":"MONDO:0003376","xrefs":{"Monarch":{"xref_id":"0003376"}}}


id: PR:Q9P3A8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- knd1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3A8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cullin-associated NEDD8-dissociated protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1565.07c","synonyms":[{"name":"Spom972h-knd1","type":"exact"},{"name":"cullin-associated and neddylation-dissociated protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P3A8"}


id: PBO:0066501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"raftlin family member 2","termid":"PBO:0066501"}


id: MONDO:0013283
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"common variable immunodeficiency","termid":"MONDO:0015517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency, common variable, 3","secondary_identifiers":["DOID:0081146","OMIM:613493","GARD:15668","UMLS:C3150738","MEDGEN:462088"],"synonyms":[{"name":"CVID3","type":"related"},{"name":"antibody deficiency due to CD19 defect","type":"related"},{"name":"immunodeficiency, common variable, 3","type":"exact"},{"name":"immunodeficiency, common variable, type 3","type":"exact"}],"termid":"MONDO:0013283","xrefs":{"Monarch":{"xref_id":"0013283"}}}


id: MONDO:0001440
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"keratoconjunctivitis","termid":"MONDO:0004768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"neurotrophic keratoconjunctivitis","secondary_identifiers":["ICD10CM:H16.23","UMLS:C0155084","MEDGEN:509777","DOID:12125","ICD9:370.35","SCTID:77080005"],"termid":"MONDO:0001440","xrefs":{"Monarch":{"xref_id":"0001440"}}}


id: PBO:0067845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 147","termid":"PBO:0067845"}


id: MONDO:0001877
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"male infertility","termid":"MONDO:0005372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"infertility due to extratesticular cause","secondary_identifiers":["DOID:14096","SCTID:84245004","ICD9:606.8","UMLS:C0021360","MEDGEN:507846"],"synonyms":[{"name":"infertility due to extratesticular causes","type":"exact"}],"termid":"MONDO:0001877","xrefs":{"Monarch":{"xref_id":"0001877"}}}


id: FYPO:0008181
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which binding by a gene product to the RNA polymerase II CTD domain phosphorylated serine 5 is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA polymerase II CTD binding","termid":"FYPO:0008180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"decreased RNA polymerase II CTD Ser5-P binding","termid":"FYPO:0008181"}


id: MONDO:0013303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autoimmune disease in which the cause of the disease is a mutation in the SIAE gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoimmune disease, susceptibility to, 6","secondary_identifiers":["OMIM:613551","UMLS:C3150797","MEDGEN:462147"],"synonyms":[{"name":"AIS6","type":"related"},{"name":"SIAE autoimmune disease","type":"exact"},{"name":"autoimmune disease caused by mutation in SIAE","type":"exact"},{"name":"autoimmune disease, susceptibility to, 6","type":"exact"},{"name":"autoimmune disease, susceptibility to, type 6","type":"exact"},{"name":"susceptibility to autoimmune disease 6","type":"related"}],"termid":"MONDO:0013303","xrefs":{"Monarch":{"xref_id":"0013303"}}}


id: GO:1990350
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex facilitating glucose transport into, out of or within a cell, or between cells.","definition_xrefs":["PMID:15449578","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transporter complex","termid":"GO:1990351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"glucose transporter complex","termid":"GO:1990350"}


id: PBO:0061370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 30","termid":"PBO:0061370"}


id: MONDO:0005262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital or acquired cyst that is present in the central nervous system.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central nervous system cyst","secondary_identifiers":["UMLS:C0349606","EFO:0003760","MEDGEN:138106","HP:0030724","MESH:D020863","NCIT:C4657","SCTID:277333006"],"synonyms":[{"name":"CNS cyst","type":"exact"},{"name":"Rathke cleft cysts","type":"related"},{"name":"Rathke's cleft cysts","type":"related"},{"name":"Rathkes cleft cysts","type":"related"},{"name":"central nervous system cyst","type":"exact"},{"name":"central nervous system cyst (disease)","type":"exact"},{"name":"cleft cysts, Rathke's","type":"related"},{"name":"cyst of CNS","type":"exact"},{"name":"cyst of Central nervous system","type":"exact"},{"name":"cyst of the CNS","type":"exact"},{"name":"cyst of the Central nervous system","type":"exact"},{"name":"cyst, suprasellar","type":"related"},{"name":"cysts, Rathke cleft","type":"related"},{"name":"cysts, central nervous system","type":"related"},{"name":"cysts, suprasellar","type":"related"},{"name":"suprasellar cyst","type":"related"},{"name":"suprasellar cysts","type":"related"}],"termid":"MONDO:0005262","xrefs":{"Monarch":{"xref_id":"0005262"}}}


id: PBO:0089359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity implicated in DNA repair","termid":"PBO:0089359"}


id: GO:0030492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to hemoglobin, an oxygen carrying, conjugated protein containing four heme groups and globin.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"hemoglobin binding","synonyms":[{"name":"globin binding","type":"broad"},{"name":"haemoglobin binding","type":"exact"}],"termid":"GO:0030492"}


id: MONDO:0009565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by intellectual deficit, marfanoid habitus, microcephaly, and glomerulonephritis.","definition_xrefs":["Orphanet:2172"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly-glomerulonephritis-marfanoid habitus syndrome","secondary_identifiers":["MESH:C565411","UMLS:C1855348","OMIM:248760","MEDGEN:343327","GARD:3615"],"synonyms":[{"name":"MARFANOID habitus with microcephaly and glomerulonephritis","type":"related"},{"name":"microcephaly glomerulonephritis Marfanoid habitus","type":"related"}],"termid":"MONDO:0009565","xrefs":{"Monarch":{"xref_id":"0009565"}}}


id: PBO:0063913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIK3CA divergent transcript","termid":"PBO:0063913"}


id: GO:2000117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of cysteine-type endopeptidase activity.","definition_xrefs":["GOC:yaf","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cysteine-type endopeptidase activity (obsolete GO:2000117)","synonyms":[{"name":"negative regulation of lysosomal cysteine-type endopeptidase","type":"related"},{"name":"negative regulation of thiol endopeptidase activity","type":"exact"}],"termid":"GO:2000117"}


id: PBO:0041966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 9","termid":"PBO:0041966"}


id: PBO:0073200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semaphorin 3A","termid":"PBO:0073200"}


id: PBO:0028945
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glutathione_synthase_activity","termid":"PBO:0028945"}


id: PBO:0054393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1789","termid":"PBO:0054393"}


id: MONDO:0000365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary congenital glaucoma (PCG) is characterized by elevated intraocular pressure (IOP), enlargement of the globe (buphthalmos), edema, and opacification of the cornea with rupture of Descemet's membrane (Haab's striae), thinning of the anterior sclera and iris atrophy, anomalously deep anterior chamber, and structurally normal posterior segment except for progressive glaucomatous optic atrophy. Symptoms include photophobia, blepharospasm, and excessive tearing. Typically, the diagnosis is made in the first year of life. Depending on when treatment is instituted, visual acuity may be reduced and/or visual fields may be restricted. In untreated individuals, blindness invariably occurs.","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital glaucoma","termid":"MONDO:0020366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"primary congenital glaucoma","secondary_identifiers":["icd11.foundation:517092878","SCTID:415176004","NCIT:C150251","HP:0008007","UMLS:C1533041","MEDGEN:288550","DOID:0050593"],"synonyms":[{"name":"primary congenital glaucoma","type":"exact"},{"name":"primary congenital glaucoma (disease)","type":"exact"}],"termid":"MONDO:0000365","xrefs":{"Monarch":{"xref_id":"0000365"}}}


id: SO:0001055
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory_region that modulates the transcription of a gene or genes.","definition_xrefs":["PMID:9679020","SO:regcreative"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_region","termid":"SO:0005836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional_cis_regulatory_region","synonyms":[{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:transcriptional_cis_regulatory_region","type":"exact"},{"name":"transcription-control region","type":"exact"},{"name":"transcriptional cis regulatory region","type":"exact"}],"termid":"SO:0001055"}


id: GO:0039688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A DNA replication process that uses viral RNA as a template for RNA-dependent DNA polymerases (e.g. reverse transcriptase) that synthesize the new strands.","definition_xrefs":["GOC:jl","GOC:bf","VZ:1938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral DNA genome replication","termid":"GO:0039693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"viral double stranded DNA replication via reverse transcription","synonyms":[{"name":"RNA-dependent viral DNA replication","type":"related"},{"name":"dsDNA replication via RNA intermediate","type":"exact"},{"name":"viral RNA-dependent DNA replication","type":"exact"}],"termid":"GO:0039688"}


id: MONDO:0100238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of Fanconi renotubular syndrome that is inherited.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi renotubular syndrome","termid":"MONDO:0001083"},{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"inherited Fanconi renotubular syndrome","secondary_identifiers":["OMIMPS:134600"],"synonyms":[{"name":"hereditary Fanconi renotubular syndrome","type":"exact"}],"termid":"MONDO:0100238","xrefs":{"Monarch":{"xref_id":"0100238"}}}


id: GO:2001082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to inulin.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"inulin binding","termid":"GO:2001082"}


id: GO:0008445
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-aspartate + H2O + O2 = H2O2 + NH4+ + oxaloacetate.","definition_xrefs":["RHEA:12512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-amino-acid oxidase activity","termid":"GO:0003884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"D-aspartate oxidase activity","secondary_identifiers":["EC:1.4.3.1","Reactome:R-HSA-6810076"],"synonyms":[{"name":"D-aspartate:oxygen oxidoreductase (deaminating)","type":"related"},{"name":"D-aspartic oxidase activity","type":"related"},{"name":"aspartic oxidase activity","type":"related"}],"termid":"GO:0008445"}


id: GO:1990014
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Square array of closely spaced intramembrane particles, 4-6 nm in size, that form supramolecular aggregates found in the plasma membrane of astrocytes, skeletal muscle and epithelial cells. They have been shown to contain aquaporins (water channels).","definition_xrefs":["PMID:22718347","NIF_Subcellular:sao1747012216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"orthogonal array","synonyms":[{"name":"OAP","type":"related"},{"name":"orthogonal array of particles","type":"exact"},{"name":"square array","type":"related"}],"termid":"GO:1990014"}


id: FYPO:0000644
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"711-723","gene_uniquename":"SJAG_01143","name":"mid1-delta(711-723 a.a.)","uniquename":"SJAG_01143:allele-2"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121348],"is_not":false,"summary":null,"term":"FYPO:0000644"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cellular protein localization is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"normal protein localization","termid":"FYPO:0003627"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01143":null},"genotype_count":1,"genotypes_by_uniquename":{"mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"mid1-delta(711-723 a.a.)(aa)","display_uniquename":"mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization during vegetative growth","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_01143"],"single_locus_genotype_uniquenames":["mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"normal cellular protein localization during vegetative growth","type":"exact"},{"name":"normal protein localisation during vegetative growth","type":"exact"},{"name":"normal protein localization during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000644","terms_by_termid":{"FYECO:0000137":null,"FYPO:0000644":null}}


id: GO:1905080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cerebellar neuron development.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:26609159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"negative regulation of neuron differentiation","termid":"GO:0045665"},{"relation_name":"is_a","term_name":"regulation of cerebellar neuron development","termid":"GO:1905079"},{"relation_name":"negatively_regulates","term_name":"cerebellar neuron development","termid":"GO:0098749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cerebellar neuron development","synonyms":[{"name":"down regulation of cerebellar neuron development","type":"exact"},{"name":"down-regulation of cerebellar neuron development","type":"exact"},{"name":"downregulation of cerebellar neuron development","type":"exact"},{"name":"inhibition of cerebellar neuron development","type":"narrow"}],"termid":"GO:1905080"}


id: PBO:0066181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBM5 antisense RNA 1","termid":"PBO:0066181"}


id: GO:0035631
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains at least CD40 (a cell surface receptor of the tumour necrosis factor receptor (TNFR) superfamily), and other signaling molecules.","definition_xrefs":["GOC:BHF","PMID:20614026","PMID:9221764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"CD40 receptor complex","termid":"GO:0035631"}


id: GO:0043988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an phosphate group to a serine residue at position 28 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-S28 phosphorylation (obsolete GO:0043988)","synonyms":[{"name":"histone H3 phosphorylation at S28","type":"exact"},{"name":"histone H3S28 phosphorylation","type":"exact"}],"termid":"GO:0043988"}


id: GO:0000049
data:
  {"annotated_genes":["SJAG_03071","SJAG_02042","SJAG_03629","SJAG_03788","SJAG_02637","SJAG_03584","SJAG_01302","SJAG_04856","SJAG_03626","SJAG_02615","SJAG_04680","SJAG_02977","SJAG_00169","SJAG_00886","SJAG_02661","SJAG_04762","SJAG_01314","SJAG_03461","SJAG_02263","SJAG_00358","SJAG_01074","SJAG_04582","SJAG_02352","SJAG_00466","SJAG_00488","SJAG_04181","SJAG_01248","SJAG_00579","SJAG_03932","SJAG_04285","SJAG_04700","SJAG_04756","SJAG_01797","SJAG_00325","SJAG_04993","SJAG_02288","SJAG_01704","SJAG_04409","SJAG_03545","SJAG_04175","SJAG_00936","SJAG_01877","SJAG_00195","SJAG_02099"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58446,59241,59464,61096,61367,61666,62054,62717,63965,64477,65282,68042,69135,69610,70617,70868,72335,72882,73544,73934,74070,74124,74204,74714,75277,75355,78536,79278,80699,81210,81293,89554,96293,96527,100298,104088,104713,107611,111523,114005,114728,119789],"is_not":false,"summary":null,"term":"GO:0000049"},{"annotations":[99040,107249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990856"}]},"cv_name":"molecular_function","definition":"Binding to a transfer RNA.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00195":null,"SJAG_00325":null,"SJAG_00358":null,"SJAG_00466":null,"SJAG_00488":null,"SJAG_00579":null,"SJAG_00886":null,"SJAG_00936":null,"SJAG_01074":null,"SJAG_01248":null,"SJAG_01302":null,"SJAG_01314":null,"SJAG_01704":null,"SJAG_01797":null,"SJAG_01877":null,"SJAG_02042":null,"SJAG_02099":null,"SJAG_02263":null,"SJAG_02288":null,"SJAG_02352":null,"SJAG_02615":null,"SJAG_02637":null,"SJAG_02661":null,"SJAG_02977":null,"SJAG_03071":null,"SJAG_03461":null,"SJAG_03545":null,"SJAG_03584":null,"SJAG_03626":null,"SJAG_03629":null,"SJAG_03788":null,"SJAG_03932":null,"SJAG_04175":null,"SJAG_04181":null,"SJAG_04285":null,"SJAG_04409":null,"SJAG_04582":null,"SJAG_04680":null,"SJAG_04700":null,"SJAG_04756":null,"SJAG_04762":null,"SJAG_04856":null,"SJAG_04993":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"tRNA binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000946","Reactome:R-HSA-2408509"],"synonyms":[{"name":"base pairing with tRNA","type":"narrow"}],"termid":"GO:0000049","terms_by_termid":{"GO:0000049":null,"GO:1990856":null}}


id: GO:0019511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydroxylation of peptidyl-proline to form peptidyl-hydroxyproline.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein hydroxylation","termid":"GO:0018126"},{"relation_name":"is_a","term_name":"peptidyl-proline modification","termid":"GO:0018208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-proline hydroxylation","secondary_identifiers":["GO:0006472"],"termid":"GO:0019511"}


id: PBO:0047266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 246 member A","termid":"PBO:0047266"}


id: MONDO:0002418
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the epithelial cell","direct_ancestors":[{"relation_name":"is_a","term_name":"ethmoid sinus cancer","termid":"MONDO:0001763"},{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ethmoid sinus adenocarcinoma","secondary_identifiers":["DOID:2766","NCIT:C6237","UMLS:C1333472","MEDGEN:272595"],"synonyms":[{"name":"adenocarcinoma of ethmoid sinus","type":"related"},{"name":"adenocarcinoma of the ethmoid sinus","type":"exact"}],"termid":"MONDO:0002418","xrefs":{"Monarch":{"xref_id":"0002418"}}}


id: PBO:0040352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit g pseudogene 1","termid":"PBO:0040352"}


id: GO:0018575
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3,6-dichlorocatechol + O2 = 2 H+ + 2,5-dichloro-cis,cis-muconate.","definition_xrefs":["UM-BBD_reactionID:r0655"],"gene_count":0,"genotype_count":0,"name":"obsolete chlorocatechol 1,2-dioxygenase activity (obsolete GO:0018575)","termid":"GO:0018575"}


id: MONDO:0033482
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare hereditary ataxia characterized by adult onset of slowly progressive cerebellar degeneration with gait ataxia, dysmetria, dysarthria, and in some cases diplopia. Cognitive functions are normal, and seizures are absent. Magnetic resonance imaging reveals mild atrophy of the cerebellar vermis.","definition_xrefs":["Orphanet:642747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia","termid":"MONDO:0020380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"spinocerebellar ataxia 47","secondary_identifiers":["MEDGEN:1636349","OMIM:617931","DOID:0111743","UMLS:C4693672"],"synonyms":[{"name":"PUM1-related cerebellar ataxia","type":"exact"},{"name":"SCA47","type":"related"},{"name":"spinocerebellar ataxia 47","type":"exact"}],"termid":"MONDO:0033482","xrefs":{"Monarch":{"xref_id":"0033482"}}}


id: PBO:0065483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome activator subunit 2 pseudogene 2","termid":"PBO:0065483"}


id: SO:0001684
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute of an experimentally derived feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"experimental_feature_attribute","synonyms":[{"name":"experimental feature attribute","type":"related"}],"termid":"SO:0001684"}


id: PBO:0003320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial distribution and morphology protein Mdm35 (predicted)","termid":"PBO:0003320"}


id: PATO:0000194
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000194 spontaneous_activity (obsolete PATO:0000194)","termid":"PATO:0000194"}


id: GO:1990204
data:
  {"annotated_genes":["SJAG_04677","SJAG_02464","SJAG_04675","SJAG_01671","SJAG_03920","SJAG_00260","SJAG_04665","SJAG_03290","SJAG_03064","SJAG_02158","SJAG_03641","SJAG_00866","SJAG_00885","SJAG_02901","SJAG_03163","SJAG_02006","SJAG_03861","SJAG_02398","SJAG_06382"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[57985,75915,79793,89228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005960"},{"annotations":[79679,79463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033573"},{"annotations":[108568,73494,71969,65188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045252"},{"annotations":[75085,74450,76345,89232,96819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045254"},{"annotations":[78554,77750,76365,90628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045273"},{"annotations":[109087,78208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005971"}]},"cv_name":"cellular_component","definition":"Any protein complex that possesses oxidoreductase activity.","definition_xrefs":["PMID:18982432","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_00866":null,"SJAG_00885":null,"SJAG_01671":null,"SJAG_02006":null,"SJAG_02158":null,"SJAG_02398":null,"SJAG_02464":null,"SJAG_02901":null,"SJAG_03064":null,"SJAG_03163":null,"SJAG_03290":null,"SJAG_03641":null,"SJAG_03861":null,"SJAG_03920":null,"SJAG_04665":null,"SJAG_04675":null,"SJAG_04677":null,"SJAG_06382":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"oxidoreductase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"oxidation-reduction complex","type":"exact"},{"name":"redox complex","type":"exact"}],"termid":"GO:1990204","terms_by_termid":{"GO:0005960":null,"GO:0005971":null,"GO:0033573":null,"GO:0045252":null,"GO:0045254":null,"GO:0045273":null}}


id: GO:0071284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lead ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lead ion","termid":"GO:0010288"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to lead ion","termid":"GO:0071284"}


id: PBO:0071440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 46","termid":"PBO:0071440"}


id: PBO:0060631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCK interacting protein with SH3 domain","termid":"PBO:0060631"}


id: MOD:00826
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-threonine residue and an L-cysteine residue by a thioester bond to form S-(L-threonyl)-L-cysteine.","definition_xrefs":["PubMed:15268951","RESID:AA0415"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioester crosslinked residues","termid":"MOD:00395"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(L-threonyl)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(2S,3R)-2-amino-3-hydroxybutanoyl]sulfanyl)propanoic acid","type":"exact"},{"name":"CROSSLNK Threonyl cysteine thioester (Cys-Thr)","type":"exact"},{"name":"S-(2-amino-3-hydroxybutanoyl)cysteine","type":"exact"},{"name":"S-(L-threonyl)-L-cysteine","type":"exact"},{"name":"XLNK1ThrSCys","type":"exact"},{"name":"threonine cysteine thioester","type":"exact"}],"termid":"MOD:00826"}


id: GO:0052437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of calcium ion fluxes as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of defense-related symbiont calcium ion flux (obsolete GO:0052437)","synonyms":[{"name":"modulation by organism of defense-related symbiont Ca2+ flux","type":"exact"},{"name":"modulation by organism of defense-related symbiont calcium ion flux","type":"exact"}],"termid":"GO:0052437"}


id: PBO:0059502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded ATP synthase membrane subunit 6","termid":"PBO:0059502"}


id: PBO:0026731
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_mitotic_spindle_pole_body_during_anaphase","termid":"PBO:0026731"}


id: GO:0106242
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-geranylgeranyl diphosphate = (+)-kolavenyl diphosphate.","definition_xrefs":["GOC:eab","RHEA:54676","PMID:29315936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"kolavenyl diphosphate synthase activity","secondary_identifiers":["EC:5.5.1.29"],"termid":"GO:0106242"}


id: PBO:0116975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AHR interacting HSP90 co-chaperone","termid":"PBO:0116975"}


id: PBO:0062022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily M member 3","termid":"PBO:0062022"}


id: GO:1902483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A pyroptotic cell death process that occurs in a cytotoxic T cell.","definition_xrefs":["PMID:32299851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyroptotic cell death","termid":"GO:0141201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytotoxic T cell pyroptotic cell death","synonyms":[{"name":"cytotoxic T cell apoptosis","type":"related"},{"name":"cytotoxic T cell apoptotic process","type":"related"},{"name":"cytotoxic T cell pyroptotic process","type":"broad"},{"name":"cytotoxic T lymphocyte apoptotic process","type":"related"},{"name":"cytotoxic T-cell apoptosis","type":"related"},{"name":"cytotoxic T-cell programmed cell death","type":"related"}],"termid":"GO:1902483"}


id: PBO:0066920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 222","termid":"PBO:0066920"}


id: RO:0002336
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of positively regulates","direct_ancestors":[{"relation_name":"is_a","term_name":"regulated_by","termid":"RO:0002334"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"positively_regulated_by","termid":"RO:0002336"}


