# terms

id: FYPO:0003026
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) begins later than normal. Synapsis is the process in which the side by side pairing and physical juxtaposition of homologous chromosomes is established and maintained. Pairing may be assayed globally or at one or more specific loci.","definition_xrefs":["GO:0007129","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"delayed onset of homologous chromosome pairing","synonyms":[{"name":"delayed homologous chromosome pairing","type":"exact"},{"name":"delayed onset of homologous chromosome pairing at meiosis","type":"exact"},{"name":"delayed onset of synapsis","type":"exact"}],"termid":"FYPO:0003026"}


id: GO:0004359
data:
  {"annotated_genes":["SJAG_03775","SJAG_02618","SJAG_00964","SJAG_00392","SJAG_00691"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[65383,79393,80119,95235,112937],"is_not":false,"summary":null,"term":"GO:0004359"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamine + H2O = L-glutamate + NH4+.","definition_xrefs":["RHEA:15889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00691":null,"SJAG_00964":null,"SJAG_02618":null,"SJAG_03775":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"glutaminase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:3.5.1.2","Reactome:R-HSA-70609"],"synonyms":[{"name":"L-glutaminase activity","type":"related"},{"name":"L-glutamine amidohydrolase activity","type":"related"},{"name":"glutaminase I","type":"related"},{"name":"glutamine aminohydrolase activity","type":"related"}],"termid":"GO:0004359","terms_by_termid":{"GO:0004359":null}}


id: PBO:0080020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 6, pseudogene","termid":"PBO:0080020"}


id: GO:0070732
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An organelle envelope that surrounds the chromosomes and the central part of the spindle apparatus during mitosis and meiosis; observed in many invertebrates. The spindle envelope consists of membrane layers, called parafusorial membranes, derived from endoplasmic reticulum membrane; in male meiosis it forms during prometaphase and persists until early in the ensuing interphase.","definition_xrefs":["GOC:sart","GOC:mah","PMID:19417004","PMID:6428889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle envelope","termid":"GO:0031967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"spindle envelope","termid":"GO:0070732"}


id: PBO:0070923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 31","termid":"PBO:0070923"}


id: PBO:0110394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEFH pseudogene 2","termid":"PBO:0110394"}


id: PBO:0068809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 46, pseudogene","termid":"PBO:0068809"}


id: MONDO:0021187
data:
  {"annotated_genes":["SJAG_01072","SJAG_04785","SJAG_02432"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88295,88296,88297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011369"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01072":null,"SJAG_02432":null,"SJAG_04785":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hyperlipidemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10CM:E78.5","SCTID:55822004","UMLS:C0020473","HP:0003077","MEDGEN:5692","ICD9:272.4","MESH:D006949"],"synonyms":[{"name":"hyperlipemia","type":"related"},{"name":"hyperlipemias","type":"related"},{"name":"hyperlipidemia","type":"exact"},{"name":"hyperlipidemia (disease)","type":"exact"},{"name":"lipemia","type":"related"},{"name":"lipemias","type":"related"},{"name":"lipidemia","type":"related"},{"name":"lipidemias","type":"related"}],"termid":"MONDO:0021187","terms_by_termid":{"MONDO:0011369":null},"xrefs":{"Monarch":{"xref_id":"0021187"}}}


id: PBO:0044238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cullin 7","termid":"PBO:0044238"}


id: FYPO:0006738
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the proportion of cells in the population remains viable after entering stationary phase does not change in the presence of beta-hibitakanine. Normally, wild-type cell populations survive longer in the presence of beta-hibitakanine than in its absence.","definition_xrefs":["PMID:29900664","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"stationary phase viability unaffected by beta-hibitakanine","synonyms":[{"name":"chronological lifespan unaffected by beta-hibitakanine","type":"related"},{"name":"loss of chronological lifespan extension by beta-hibitakanine","type":"related"},{"name":"loss of stationary phase viability extension in presence of beta-hibitakanine","type":"exact"}],"termid":"FYPO:0006738"}


id: PBO:0047939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(13)(q21.2)","termid":"PBO:0047939"}


id: PBO:0000554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Glutamic acid","termid":"PBO:0000554"}


id: PBO:0040604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAGE family member 2, pseudogene","termid":"PBO:0040604"}


id: MONDO:0020351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Blake pouch cyst is a non-syndromic, usually benign, cystic malformation of the posterior fossa characterized by a midline outpouching of the superior medullary velum into the cisterna magna that results from failure of the rudimental fourth ventricular tela choroidea to regress during embryogenesis. Patients can be asymptomatic or present in childhood or adulthood with clinical manifestations of hydrocephalus, such as headache, hypotonia, vertigo, syncope, vomiting, blurred or double vision, nystagmus, papilledema, and delayed gait development.","definition_xrefs":["Orphanet:98922"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystic malformation of the posterior fossa","termid":"MONDO:0020134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"Blake pouch cyst","secondary_identifiers":["MEDGEN:783279","UMLS:C3662124","GARD:19603"],"termid":"MONDO:0020351","xrefs":{"Monarch":{"xref_id":"0020351"}}}


id: PBO:0077280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM18 divergent transcript","termid":"PBO:0077280"}


id: GO:0061406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of deprivation of glucose.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to glucose starvation (obsolete GO:0061406)","termid":"GO:0061406"}


id: GO:0051218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of tungsten into a protein via L-selenocysteinyl tungsten bis(molybdopterin guanine dinucleotide).","definition_xrefs":["PMID:12220497","RESID:AA0376","PDB:1HOH"],"gene_count":0,"genotype_count":0,"name":"obsolete tungsten incorporation via L-selenocysteinyl tungsten bis(molybdopterin guanine dinucleotide) (obsolete GO:0051218)","termid":"GO:0051218"}


id: PBO:0089628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADHX epimerase","termid":"PBO:0089628"}


id: PBO:0044393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 18","termid":"PBO:0044393"}


id: PBO:0046079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A1 pseudogene 4","termid":"PBO:0046079"}


id: PBO:0000178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S3a","termid":"PBO:0000178"}


id: MONDO:0006348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive, high-grade and poorly differentiated carcinoma with neuroendocrine differentiation that arises from the pancreas. It is characterized by the presence of malignant small cells.","definition_xrefs":["NCIT:C95583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell carcinoma","termid":"MONDO:0000402"},{"relation_name":"is_a","term_name":"pancreatic endocrine carcinoma","termid":"MONDO:0005893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"pancreatic small cell neuroendocrine carcinoma","secondary_identifiers":["UMLS:C2987240","MEDGEN:459466","EFO:1000444"],"synonyms":[{"name":"endocrine pancreas small cell carcinoma","type":"exact"},{"name":"pancreatic small cell NEC","type":"exact"},{"name":"pancreatic small cell NEC G3","type":"exact"},{"name":"pancreatic small cell neuroendocrine carcinoma","type":"exact"},{"name":"small cell carcinoma of endocrine pancreas","type":"exact"}],"termid":"MONDO:0006348","xrefs":{"Monarch":{"xref_id":"0006348"}}}


id: MONDO:0100501
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare anomaly (1 in 14,000 to 42,000 pregnancies; 1 in 7500 fetuses from 10 to 14 weeks of gestation) characterized by a complex anomaly of the anterior abdominal wall, severe kyphoscoliosis, rudimentary umbilical cord, and anatomical defects of the pelvis and lower limbs.","definition_xrefs":["PMID:33115503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abdominal wall malformation","termid":"MONDO:0100298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"body-stalk anomaly","synonyms":[{"name":"BSA","type":"exact"},{"name":"LBWC","type":"narrow"},{"name":"body stalk anomaly","type":"exact"},{"name":"body stalk complex","type":"exact"},{"name":"limb body wall complex","type":"narrow"}],"termid":"MONDO:0100501","xrefs":{"Monarch":{"xref_id":"0100501"}}}


id: GO:0004211
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase-9 activity (obsolete GO:0004211)","synonyms":[{"name":"caspase-9 activity","type":"exact"}],"termid":"GO:0004211"}


id: PATO:0001144
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001144 ig g concentration value (obsolete PATO:0001144)","termid":"PATO:0001144"}


id: PBO:0065813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB3A interacting protein like 1","termid":"PBO:0065813"}


id: GO:1902772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of phosphorelay signal transduction system that is involved in hydrogen peroxide mediated signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:18406331","GO_REF:0000060"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphorelay signal transduction system involved in hydrogen peroxide mediated signaling pathway (obsolete GO:1902772)","synonyms":[{"name":"activation of two-component signal transduction involved in H2O2 mediated signaling pathway","type":"narrow"},{"name":"activation of two-component signal transduction involved in hydrogen peroxide mediated signaling pathway","type":"narrow"},{"name":"activation of two-component signal transduction involved in hydrogen peroxide mediated signalling pathway","type":"narrow"},{"name":"positive regulation of histidyl-aspartyl phosphorelay involved in H2O2 mediated signaling pathway","type":"exact"},{"name":"positive regulation of histidyl-aspartyl phosphorelay involved in hydrogen peroxide mediated signaling pathway","type":"exact"},{"name":"positive regulation of histidyl-aspartyl phosphorelay involved in hydrogen peroxide mediated signalling pathway","type":"exact"},{"name":"positive regulation of phosphorelay signal transduction system involved in H2O2 mediated signaling pathway","type":"exact"},{"name":"positive regulation of phosphorelay signal transduction system involved in hydrogen peroxide mediated signalling pathway","type":"exact"},{"name":"positive regulation of two-component signal transduction system (phosphorelay) involved in H2O2 mediated signaling pathway","type":"narrow"},{"name":"positive regulation of two-component signal transduction system (phosphorelay) involved in hydrogen peroxide mediated signaling pathway","type":"narrow"},{"name":"positive regulation of two-component signal transduction system (phosphorelay) involved in hydrogen peroxide mediated signalling pathway","type":"narrow"},{"name":"stimulation of two-component signal transduction involved in H2O2 mediated signaling pathway","type":"narrow"},{"name":"stimulation of two-component signal transduction involved in hydrogen peroxide mediated signaling pathway","type":"narrow"},{"name":"stimulation of two-component signal transduction involved in hydrogen peroxide mediated signalling pathway","type":"narrow"},{"name":"up regulation of two-component signal transduction involved in H2O2 mediated signaling pathway","type":"exact"},{"name":"up regulation of two-component signal transduction involved in hydrogen peroxide mediated signaling pathway","type":"exact"},{"name":"up regulation of two-component signal transduction involved in hydrogen peroxide mediated signalling pathway","type":"exact"},{"name":"up-regulation of two-component signal transduction involved in H2O2 mediated signaling pathway","type":"exact"},{"name":"up-regulation of two-component signal transduction involved in hydrogen peroxide mediated signaling pathway","type":"exact"},{"name":"up-regulation of two-component signal transduction involved in hydrogen peroxide mediated signalling pathway","type":"exact"},{"name":"upregulation of two-component signal transduction involved in H2O2 mediated signaling pathway","type":"exact"},{"name":"upregulation of two-component signal transduction involved in hydrogen peroxide mediated signaling pathway","type":"exact"},{"name":"upregulation of two-component signal transduction involved in hydrogen peroxide mediated signalling pathway","type":"exact"}],"termid":"GO:1902772"}


id: SO:0000647
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding a micro RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"pre_miRNA","termid":"SO:0001244"},{"relation_name":"is_a","term_name":"nc_primary_transcript","termid":"SO:0000483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miRNA_primary_transcript","secondary_identifiers":["SO:0000648"],"synonyms":[{"name":"miRNA primary transcript","type":"exact"},{"name":"micro RNA primary transcript","type":"exact"},{"name":"small temporal RNA primary transcript","type":"exact"},{"name":"stRNA primary transcript","type":"exact"},{"name":"stRNA_primary_transcript","type":"exact"}],"termid":"SO:0000647"}


id: GO:0045212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of neurotransmitter receptors.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotransmitter receptor biosynthetic process (obsolete GO:0045212)","synonyms":[{"name":"neurotransmitter receptor anabolism","type":"exact"},{"name":"neurotransmitter receptor biosynthesis","type":"exact"},{"name":"neurotransmitter receptor formation","type":"exact"},{"name":"neurotransmitter receptor synthesis","type":"exact"}],"termid":"GO:0045212"}


id: PR:O60177
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rrp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ATP-dependent helicase C23E6.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23E6.02","synonyms":[{"name":"Spom972h-rrp2","type":"exact"}],"termid":"PR:O60177"}


id: PBO:0035913
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_medial_membrane_band_assembly","termid":"PBO:0035913"}


id: MONDO:1030004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare clinical disorder characterized by at least three recurrent episodes of meningitis associated with spontaneous recovery with or without antiviral therapy. Herpes simplex virus type 2 has frequently been implicated in the setting of this illness. RBLM is rare with prevalence rates estimated at 2 per 100,000 persons.","definition_xrefs":["PMID:36304598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral meningitis","termid":"MONDO:0007015"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mollaret’s meningitis","synonyms":[{"name":"RBLM","type":"exact"},{"name":"recurrent benign lymphocytic meningitis","type":"exact"}],"termid":"MONDO:1030004","xrefs":{"Monarch":{"xref_id":"1030004"}}}


id: GO:0000770
data:
  {"annotated_genes":["SJAG_02602"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090539"}]},"cv_name":"biological_process","definition":"The directed movement of a peptide pheromone out of a cell by a secretion or export pathway used solely for the export of peptide pheromones.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02602":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"peptide pheromone export","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0007325"],"synonyms":[{"name":"a-factor export","type":"narrow"}],"termid":"GO:0000770","terms_by_termid":{"GO:0090539":null}}


id: GO:0006706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid metabolic process","termid":"GO:0008202"},{"relation_name":"is_a","term_name":"lipid catabolic process","termid":"GO:0016042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"steroid catabolic process","synonyms":[{"name":"steroid breakdown","type":"exact"},{"name":"steroid catabolism","type":"exact"},{"name":"steroid degradation","type":"exact"}],"termid":"GO:0006706"}


id: PBO:0004560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein Lub1","termid":"PBO:0004560"}


id: GO:0047518
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-methyladenosine + H2O = 1-methyladenine + ribofuranose.","definition_xrefs":["EC:3.2.2.13","RHEA:12865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"1-methyladenosine nucleosidase activity","secondary_identifiers":["MetaCyc:1-METHYLADENOSINE-NUCLEOSIDASE-RXN","KEGG_REACTION:R03885"],"synonyms":[{"name":"1-methyladenosine hydrolase activity","type":"related"},{"name":"1-methyladenosine ribohydrolase activity","type":"related"}],"termid":"GO:0047518"}


id: PBO:0056776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase like 25B","termid":"PBO:0056776"}


id: GO:0042268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the rupture of cell membranes and the loss of cytoplasm.","definition_xrefs":["GOC:mtg_apoptosis","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cytolysis","termid":"GO:0019835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cytolysis","termid":"GO:0042268"}


id: FYPO:0002512
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the palmitoylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein palmitoylation","termid":"FYPO:0002505"},{"relation_name":"is_a","term_name":"abnormal protein palmitoylation during meiosis","termid":"FYPO:0002514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein palmitoylation during meiosis","synonyms":[{"name":"decreased protein palmitoylation during meiotic nuclear division","type":"exact"},{"name":"reduced protein palmitoylation during meiosis","type":"exact"}],"termid":"FYPO:0002512"}


id: SO:0000860
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Attribute describing sequence regions occurring in same order on chromosome of different species.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conserved","termid":"SO:0000856"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntenic","secondary_identifiers":["http://en.wikipedia.org/wiki/Syntenic"],"termid":"SO:0000860"}


id: PR:O43053
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12413:SF0","OMA:SCHPO04028","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC342.01c","secondary_identifiers":["UniProtKB:O43053"],"synonyms":[{"name":"Dol-P-Glc:Man(9)GlcNAc(2)-PP-Dol alpha-1,3-glucosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ALG6","type":"exact"},{"name":"asparagine-linked glycosylation protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"dolichyl-P-Glc:Man9GlcNAc2-PP-dolichyl glucosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43053"}


id: PBO:0052347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 3A","termid":"PBO:0052347"}


id: PBO:0063356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCOTH pseudogene 1","termid":"PBO:0063356"}


id: MONDO:0003934
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma of the breast characterized by the presence of two intermingled cellular components: cells with abundant granular, eosinophilic cytoplasm, and cells with abundant cytoplasm containing fine empty vacuoles.","definition_xrefs":["NCIT:C5141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apocrine adenocarcinoma","termid":"MONDO:0003214"},{"relation_name":"is_a","term_name":"breast ductal adenocarcinoma","termid":"MONDO:0005590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"breast apocrine carcinoma","secondary_identifiers":["UMLS:C1332316","DOID:6581","MEDGEN:272319"],"synonyms":[{"name":"apocrine adenocarcinoma of breast","type":"exact"},{"name":"apocrine breast carcinoma","type":"exact"},{"name":"apocrine carcinoma of breast","type":"exact"},{"name":"apocrine carcinoma of the breast","type":"exact"},{"name":"breast apocrine adenocarcinoma","type":"exact"},{"name":"breast apocrine carcinoma","type":"exact"}],"termid":"MONDO:0003934","xrefs":{"Monarch":{"xref_id":"0003934"}}}


id: PBO:0029804
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population_with_abnormal_cell_shape_(obsolete_FYPO:0002433)","termid":"PBO:0029804"}


id: PBO:0029396
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_nucleoplasm_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0029396"}


id: GO:0035319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Growth of a prehair in the approximately 10 hour period following its emergence from an epidermal cell in an imaginal disc-derived wing. Prehair elongation is guided and/or driven by the polymerization of actin filaments and the orderly crosslinking of filaments into bundles.","definition_xrefs":["PMID:11832234","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"is_a","term_name":"cell projection morphogenesis","termid":"GO:0048858"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing hair organization","termid":"GO:0035317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived wing hair elongation","synonyms":[{"name":"wing hair elongation","type":"exact"},{"name":"wing prehair extension","type":"related"}],"termid":"GO:0035319"}


id: GO:0002044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of endothelial cells into the extracellular matrix in order to form new blood vessels during intussusceptive angiogenesis.","definition_xrefs":["PMID:16391003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel endothelial cell migration","termid":"GO:0043534"},{"relation_name":"part_of","term_name":"intussusceptive angiogenesis","termid":"GO:0002041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood vessel endothelial cell migration involved in intussusceptive angiogenesis","termid":"GO:0002044"}


id: PBO:0026759
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_polyubiquitination_during_cellular_response_to_UV","termid":"PBO:0026759"}


id: PBO:0060732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDUFAF2 pseudogene 1","termid":"PBO:0060732"}


id: MONDO:0800337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"acute tubulointerstitial nephritis","secondary_identifiers":["UMLS:C1843274","MEDGEN:334716"],"synonyms":[{"name":"ATIN","type":"exact"}],"termid":"MONDO:0800337","xrefs":{"Monarch":{"xref_id":"0800337"}}}


id: PBO:0082928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic aldehyde dehydrogenase; involved in ethanol oxidation and beta-alanine biosynthesis; uses NAD+ as the preferred coenzyme; expression is stress induced and glucose repressed; very similar to Ald3p","termid":"PBO:0082928"}


id: GO:0002176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of male germ cells, resulting in the expansion of a cell population.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ cell proliferation","termid":"GO:0036093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male germ cell proliferation","termid":"GO:0002176"}


id: MONDO:0020584
data:
  {"annotated_genes":["SJAG_01351","SJAG_02297","SJAG_00988","SJAG_00839","SJAG_04495","SJAG_00605","SJAG_05283","SJAG_04334","SJAG_02796","SJAG_02009","SJAG_04192"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010480"},{"annotations":[87243],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009902"},{"annotations":[87691],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009259"},{"annotations":[88000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009284"},{"annotations":[87462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009295"},{"annotations":[88881],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009113"},{"annotations":[87972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013275"},{"annotations":[88255,88254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009340"},{"annotations":[87383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009950"},{"annotations":[87575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014221"}]},"cv_name":"mondo","definition":"Any form of anemia that results from the absence of, or the defective action of, any enzyme.","definition_xrefs":["NCIT:C35472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00605":null,"SJAG_00839":null,"SJAG_00988":null,"SJAG_01351":null,"SJAG_02009":null,"SJAG_02297":null,"SJAG_02796":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"anemia due to enzyme disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:105411","UMLS:C0494226"],"synonyms":[{"name":"anemia due to enzyme disorder","type":"exact"}],"termid":"MONDO:0020584","terms_by_termid":{"MONDO:0009113":null,"MONDO:0009259":null,"MONDO:0009284":null,"MONDO:0009295":null,"MONDO:0009340":null,"MONDO:0009902":null,"MONDO:0009950":null,"MONDO:0010480":null,"MONDO:0013275":null,"MONDO:0014221":null},"xrefs":{"Monarch":{"xref_id":"0020584"}}}


id: MONDO:0010619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked hypophosphatemia (XLH) is a hereditary renal phosphate-wasting disorder characterized by hypophosphatemia, rickets and/or osteomalacia, and diminished growth.","definition_xrefs":["Orphanet:89936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked dominant disease","termid":"MONDO:0020604"},{"relation_name":"is_a","term_name":"X-linked hypophosphatemic rickets","termid":"MONDO:0020720"},{"relation_name":"is_a","term_name":"abnormal mineralization disorder","termid":"MONDO:0800096"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked dominant hypophosphatemic rickets","secondary_identifiers":["MEDGEN:196551","MESH:D053098","SCTID:82236004","NCIT:C85234","DOID:0050445","NCIT:C123265","OMIM:307800","ICD10CM:E83.3","NANDO:1200779","GARD:12943","UMLS:C0733682"],"synonyms":[{"name":"HPDR","type":"related"},{"name":"HYP","type":"related"},{"name":"X-linked dominant hypophosphatemic rickets","type":"exact"},{"name":"X-linked hereditary hypophosphatemic rickets","type":"exact"},{"name":"X-linked hypophosphatemia","type":"broad"},{"name":"X-linked hypophosphatemic rickets","type":"broad"},{"name":"XLH","type":"exact"},{"name":"XLHR","type":"related"},{"name":"hereditary hypophosphatemic rickets, X-linked","type":"exact"},{"name":"hypophophatemia, X-linked","type":"related"},{"name":"hypophophatemic vitamin D-resistant rickets","type":"related"},{"name":"hypophosphatemia, X-linked","type":"related"},{"name":"hypophosphatemia, vitamin D-resistant rickets","type":"exact"},{"name":"hypophosphatemic rickets X-linked dominant","type":"exact"},{"name":"hypophosphatemic rickets, X-linked","type":"exact"},{"name":"hypophosphatemic rickets, X-linked dominant","type":"related"},{"name":"hypophosphatemic rickets, X-linked dominant, X-linked dominant","type":"exact"},{"name":"hypophosphatemic vitamin D-resistant rickets","type":"related"},{"name":"rickets, vitamin D-resistant","type":"exact"},{"name":"vitamin D-resistant rickets, X-linked","type":"exact"}],"termid":"MONDO:0010619","xrefs":{"Monarch":{"xref_id":"0010619"}}}


id: GO:0019290
data:
  {"annotated_genes":["SJAG_04031","SJAG_00469","SJAG_04032","SJAG_00792"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59631,107223,95922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031169"},{"annotations":[95868],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905569"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of siderophores, low molecular weight Fe(III)-chelating substances made by aerobic or facultatively anaerobic bacteria, especially when growing under iron deficient conditions. The complexes of Fe(3+)-siderophores have very high stability constants and are taken up by specific transport systems by microorganisms; the subsequent release of iron requires enzymatic action.","definition_xrefs":["PMID:20376388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore metabolic process","termid":"GO:0009237"},{"relation_name":"is_a","term_name":"nonribosomal peptide biosynthetic process","termid":"GO:0019184"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00469":null,"SJAG_00792":null,"SJAG_04031":null,"SJAG_04032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"siderophore biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0031178","GO:0031180"],"synonyms":[{"name":"siderochrome biosynthesis","type":"narrow"},{"name":"siderochrome biosynthetic process","type":"narrow"},{"name":"siderophore anabolism","type":"exact"},{"name":"siderophore biosynthesis","type":"exact"},{"name":"siderophore biosynthetic process, peptide formation","type":"narrow"},{"name":"siderophore biosynthetic process, peptide modification","type":"narrow"},{"name":"siderophore formation","type":"exact"},{"name":"siderophore synthesis","type":"exact"}],"termid":"GO:0019290","terms_by_termid":{"GO:0031169":null,"GO:1905569":null}}


id: MONDO:0007929
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Epstein syndrome (obsolete MONDO:0007929)","secondary_identifiers":["NCIT:C131639"],"termid":"MONDO:0007929","xrefs":{"Monarch":{"xref_id":"0007929"}}}


id: PBO:0048496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine deaminase","termid":"PBO:0048496"}


id: PBO:0068287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H2 subunit C pseudogene 1","termid":"PBO:0068287"}


id: PBO:0061057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nischarin","termid":"PBO:0061057"}


id: PBO:0073673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal regulatory protein beta 2","termid":"PBO:0073673"}


id: MONDO:0044244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete nail low-sulfur protein (obsolete MONDO:0044244)","secondary_identifiers":["OMIM:161080"],"synonyms":[{"name":"nail LOW-sulfur PROTEIN","type":"related"}],"termid":"MONDO:0044244","xrefs":{"Monarch":{"xref_id":"0044244"}}}


id: MONDO:0012826
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scoliosis, isolated, susceptibility to, 4","secondary_identifiers":["UMLS:C2677108","OMIM:612238","MEDGEN:393659"],"synonyms":[{"name":"IS4","type":"exact"},{"name":"scoliosis, idiopathic, susceptibility to, 4","type":"exact"},{"name":"scoliosis, isolated, susceptibility to, 4","type":"exact"}],"termid":"MONDO:0012826","xrefs":{"Monarch":{"xref_id":"0012826"}}}


id: PBO:0080356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 11 pseudogene","termid":"PBO:0080356"}


id: GO:0050670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lymphocyte proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mononuclear cell proliferation","termid":"GO:0032944"},{"relation_name":"is_a","term_name":"regulation of lymphocyte activation","termid":"GO:0051249"},{"relation_name":"regulates","term_name":"lymphocyte proliferation","termid":"GO:0046651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lymphocyte proliferation","termid":"GO:0050670"}


id: PBO:0066318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein with multiple splicing-like pseudogene","termid":"PBO:0066318"}


id: PBO:0067886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 188","termid":"PBO:0067886"}


id: MONDO:0009089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Deafness-oligodontia syndrome is characterized by sensorineural hearing loss and oligodontia/hypodontia. It has been described in two pairs of siblings and in one isolated case. Dizziness was reported in one of the pairs of siblings. Transmission appears to be autosomal recessive.","definition_xrefs":["Orphanet:3230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness-oligodontia syndrome","secondary_identifiers":["UMLS:C1857333","OMIM:221740","MEDGEN:387798","GARD:1698","MESH:C538049"],"synonyms":[{"name":"autosomal recessive sensorineural hearing impairment, dizziness, and hypodontia","type":"related"},{"name":"congenital profound sensorineural deafness and oligodontia","type":"related"},{"name":"deafness oligodontia syndrome","type":"related"},{"name":"deafness-oligodontia syndrome","type":"exact"}],"termid":"MONDO:0009089","xrefs":{"Monarch":{"xref_id":"0009089"}}}


id: PBO:0077130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TERF1 interacting nuclear factor 2","termid":"PBO:0077130"}


id: GO:0048058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the corneal lens in the compound eye over time, from its formation to the mature structure. The corneal lens is a chitinous extracellular secretion of the four underlying cone cells and the pigment cells.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"compound eye development","termid":"GO:0048749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye corneal lens development","termid":"GO:0048058"}


id: PBO:0059632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTCH2 pseudogene 4","termid":"PBO:0059632"}


id: FYPO:0003976
data:
  {"alleles_by_uniquename":{"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121064],"is_not":false,"summary":null,"term":"FYPO:0003976"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, and has a nuclear envelope that is broken into multiple small fragments during mitotic telophase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"has_part","term_name":"fragmented nuclear envelope","termid":"FYPO:0003975"},{"relation_name":"is_a","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"is_a","term_name":"fragmented nuclear envelope","termid":"FYPO:0003975"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04464":null},"genotype_count":1,"genotypes_by_uniquename":{"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000004","FYPO:0001320","FYPO:0000002","FYPO:0002403"],"is_obsolete":false,"name":"inviable vegetative cell with fragmented nuclear envelope during mitotic telophase","references_by_uniquename":{"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_04464"],"single_locus_genotype_uniquenames":["pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"inviable cell with fragmented nuclear envelope during mitotic telophase during vegetative growth","type":"exact"},{"name":"inviable vegetative cell with fragmented nuclear envelope during telophase of mitotic cell cycle","type":"related"},{"name":"lethal; vegetative cell with fragmented nuclear envelope during mitotic telophase","type":"exact"}],"termid":"FYPO:0003976","terms_by_termid":{"FYECO:0000004":null,"FYPO:0003976":null}}


id: GO:0002464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction to nonself antigens in the periphery.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tolerance induction to nonself antigen","termid":"GO:0002462"},{"relation_name":"is_a","term_name":"peripheral tolerance induction","termid":"GO:0002465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peripheral tolerance induction to nonself antigen","termid":"GO:0002464"}


id: PBO:0002309
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.2.-","termid":"PBO:0002309"}


id: PR:000027614
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- zip1 gene or a 1:1 ortholog thereof.","definition_xrefs":["PMID:15660136","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor zip1","synonyms":[{"name":"SPAC25G10.03","type":"related"},{"name":"zip1","type":"exact"}],"termid":"PR:000027614"}


id: GO:1901803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 1,5-anhydro-D-fructose.","definition_xrefs":["GOC:yaf","UniPathway:UPA00738","MetaCyc:PWY-6992","PMID:15716041","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"monosaccharide biosynthetic process","termid":"GO:0046364"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"},{"relation_name":"is_a","term_name":"1,5-anhydro-D-fructose metabolic process","termid":"GO:1901801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"1,5-anhydro-D-fructose biosynthetic process","synonyms":[{"name":"1,5-anhydro-D-fructose anabolism","type":"exact"},{"name":"1,5-anhydro-D-fructose biosynthesis","type":"exact"},{"name":"1,5-anhydro-D-fructose formation","type":"exact"},{"name":"1,5-anhydro-D-fructose synthesis","type":"exact"}],"termid":"GO:1901803"}


id: FYPO:0003331
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is decreased during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity","termid":"FYPO:0001382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"decreased protein kinase activity during mitotic interphase","synonyms":[{"name":"reduced protein kinase activity during mitotic interphase","type":"exact"}],"termid":"FYPO:0003331"}


id: GO:0036445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The self-renewing division of a neuronal stem cell.","definition_xrefs":["GOC:nhn","CL:0000047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic stem cell division","termid":"GO:0048103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuronal stem cell division","synonyms":[{"name":"NSC division","type":"exact"}],"termid":"GO:0036445"}


id: PBO:0004425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptin (predicted)","termid":"PBO:0004425"}


id: GO:0034529
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxy-3-carboxybenzalpyruvate + H2O = 3-formylsalicylic acid + pyruvate.","definition_xrefs":["PMID:7710320"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxy-3-carboxy-benzalpyruvate hydratase-aldolase activity (obsolete GO:0034529)","termid":"GO:0034529"}


id: GO:0043129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of a steady-state level of a surface-active agent that maintains the surface tension of a liquid.","definition_xrefs":["PMID:23708874","PMID:9751757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal-level chemical homeostasis","termid":"GO:0140962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"surfactant homeostasis","secondary_identifiers":["GO:0050828"],"synonyms":[{"name":"regulation of liquid surface tension","type":"related"},{"name":"regulation of surface tension of a liquid","type":"related"},{"name":"surfactant activity","type":"related"}],"termid":"GO:0043129"}


id: GO:0061074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of neural retina development, the progression of the neural retina over time from its initial formation to the mature structure. The neural retina is the part of the retina that contains neurons and photoreceptor cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"neural retina development","termid":"GO:0003407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neural retina development","termid":"GO:0061074"}


id: GO:0002936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the peptide hormone bradykinin.","definition_xrefs":["PMID:11226291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide biosynthetic process","termid":"GO:0043043"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bradykinin biosynthetic process","termid":"GO:0002936"}


id: PBO:0000954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extended Fer/CIP4 (EFC) domain protein Cdc15","termid":"PBO:0000954"}


id: PBO:0084883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial serine hydroxymethyltransferase; converts serine to glycine plus 5,10 methylenetetrahydrofolate; involved in generating precursors for purine, pyrimidine, amino acid, and lipid biosynthesis; reverse reaction generates serine","termid":"PBO:0084883"}


id: PR:G2TRM4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC8E11.12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRM4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C8E11.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8E11.12","synonyms":[{"name":"Spom972h-SPAC8E11.12","type":"exact"}],"termid":"PR:G2TRM4"}


id: GO:0004504
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl-glycine + ascorbate + O2 = peptidyl(2-hydroxyglycine) + dehydroascorbate + H2O.","definition_xrefs":["EC:1.14.17.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen","termid":"GO:0016715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"peptidylglycine monooxygenase activity","secondary_identifiers":["RHEA:21452","MetaCyc:PEPTIDYLGLYCINE-MONOOXYGENASE-RXN"],"synonyms":[{"name":"PAM activity","type":"related"},{"name":"PAM-A","type":"related"},{"name":"PAM-B","type":"related"},{"name":"peptide alpha-amidating enzyme","type":"related"},{"name":"peptide alpha-amide synthase activity","type":"related"},{"name":"peptide-alpha-amide synthetase activity","type":"related"},{"name":"peptidyl alpha-amidating enzyme activity","type":"related"},{"name":"peptidylglycine 2-hydroxylase activity","type":"exact"},{"name":"peptidylglycine alpha-amidating monooxygenase activity","type":"related"},{"name":"peptidylglycine alpha-hydroxylase activity","type":"related"},{"name":"peptidylglycine,ascorbate:oxygen oxidoreductase (2-hydroxylating)","type":"related"},{"name":"synthase, peptide alpha-amide","type":"related"}],"termid":"GO:0004504"}


id: GO:0008384
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + IkappaB protein = ADP + IkappaB phosphoprotein.","definition_xrefs":["EC:2.7.11.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003674","GO:0140096","GO:0004672","GO:0003824"],"is_obsolete":false,"name":"IkappaB kinase activity","secondary_identifiers":["Reactome:R-HSA-5684267","Reactome:R-HSA-5684275","MetaCyc:2.7.11.10-RXN","RHEA:19073"],"synonyms":[{"name":"ATP:IkappaB protein phosphotransferase activity","type":"related"},{"name":"CHUK","type":"related"},{"name":"IKBKA","type":"related"},{"name":"IKBKB","type":"related"},{"name":"IKK","type":"related"},{"name":"IKK-1","type":"related"},{"name":"IKK-2","type":"related"},{"name":"STK12","type":"related"},{"name":"TANK-binding kinase 1 activity","type":"narrow"},{"name":"TBK1","type":"related"},{"name":"inhibitor of NF-kappaB kinase activity","type":"related"},{"name":"inhibitor of NFkappaB kinase activity","type":"related"}],"termid":"GO:0008384"}


id: FYPO:0000591
data:
  {"alleles_by_uniquename":{"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000595"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transposition is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":1,"genotypes_by_uniquename":{"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal transposition","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"abnormal transposable element transposition","type":"exact"},{"name":"abnormal transposition during mitotic cell cycle","type":"related"},{"name":"abnormal transposition during vegetative growth","type":"exact"},{"name":"transposable element transposition: abnormal","type":"related"}],"termid":"FYPO:0000591","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0000595":null,"FYPO_EXT:0000001":null}}


id: PBO:0028331
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_during_mitosis","termid":"PBO:0028331"}


id: PBO:0016925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Meu32","termid":"PBO:0016925"}


id: PBO:0053797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1052","termid":"PBO:0053797"}


id: PBO:0045508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"destrin, actin depolymerizing factor","termid":"PBO:0045508"}


id: MONDO:0015779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"45,X/46,XY mixed gonadal dysgenesis (45,X/46,XY MGD) is a disorder of sex development (DSD) associated with a numerical sex chromosome abnormality resulting from Y-chromosome mosaicism and leading to abnormal gonadal development.","definition_xrefs":["Orphanet:1772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonadal dysgenesis","termid":"MONDO:0001967"},{"relation_name":"is_a","term_name":"sex chromosome disorder of sex development","termid":"MONDO:0017975"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"45,X/46,XY mixed gonadal dysgenesis","secondary_identifiers":["GARD:18747","DOID:0080656","NANDO:2200388","NCIT:C120199"],"synonyms":[{"name":"45,X/46,XY MGD","type":"exact"},{"name":"45,X/46,XY disorder of Sex development","type":"exact"},{"name":"45,X/46,XY gonadal dysgenesis","type":"exact"},{"name":"45,X0/46,XY MGD","type":"exact"},{"name":"45,X0/46,XY mixed gonadal dysgenesis","type":"exact"},{"name":"Mixed gonadal dysgenesis","type":"exact"},{"name":"XY/X0","type":"exact"}],"termid":"MONDO:0015779","xrefs":{"Monarch":{"xref_id":"0015779"}}}


id: MONDO:0019384
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of encephalitis, the etiology of which is uncertain, that is characterized by lethargy and headache.","definition_xrefs":["NCIT:C26761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral encephalitis","termid":"MONDO:0006009"},{"relation_name":"is_a","term_name":"postinfectious encephalitis","termid":"MONDO:0020068"},{"relation_name":"is_a","term_name":"parkinsonian disorder","termid":"MONDO:0021095"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encephalitis lethargica","secondary_identifiers":["SCTID:186499007","MedDRA:10052369","UMLS:C0014040","GARD:6332","Orphanet:83600","DOID:5225","icd11.foundation:1777779617","ICD9:049.8","MEDGEN:4028","NCIT:C34576"],"synonyms":[{"name":"Von Economo encephalitis","type":"exact"},{"name":"Von Economo’s disease","type":"related"},{"name":"encephalitis lethargica","type":"exact"},{"name":"epidemic encephalitis","type":"exact"},{"name":"lethargic encephalitis","type":"exact"},{"name":"von Economo disease","type":"exact"},{"name":"von Economo's disease","type":"exact"}],"termid":"MONDO:0019384","xrefs":{"Monarch":{"xref_id":"0019384"}}}


id: PR:P87241
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rib2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diaminohydroxyphosphoribosylamino-pyrimidine deaminase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.16","synonyms":[{"name":"DRAP deaminase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rib2","type":"exact"},{"name":"riboflavin-specific deaminase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87241"}


id: PBO:0084619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methionine aminopeptidase; catalyzes the cotranslational removal of N-terminal methionine from nascent polypeptides; function is partially redundant with that of Map1p","termid":"PBO:0084619"}


id: PBO:0059298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L47","termid":"PBO:0059298"}


id: GO:0043722
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (4-hydroxyphenyl)acetate + H+ = 4-cresol + CO2.","definition_xrefs":["EC:4.1.1.83","RHEA:22732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"4-hydroxyphenylacetate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R07312","MetaCyc:4.1.1.83-RXN"],"synonyms":[{"name":"4-(hydroxyphenyl)acetate carboxy-lyase (4-methylphenol-forming)","type":"related"},{"name":"4-Hpd activity","type":"related"},{"name":"4-hydroxyphenylacetate carboxy-lyase activity","type":"related"},{"name":"p-Hpd activity","type":"related"},{"name":"p-hydroxyphenylacetate decarboxylase activity","type":"related"}],"termid":"GO:0043722"}


id: MONDO:0024885
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive malignant neoplasm that arises from the ovary and is characterized by the presence of malignant epithelial cells that, in well differentiated tumors, resemble the epithelium of the fallopian tube or, in poorly differentiated tumors, show anaplastic features and marked nuclear atypia. It includes serous adenocarcinoma and serous adenocarcinofibroma.","definition_xrefs":["NCIT:C40025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant epithelial tumor of ovary","termid":"MONDO:0018364"},{"relation_name":"is_a","term_name":"ovarian serous tumor","termid":"MONDO:0037255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant ovarian serous tumor","secondary_identifiers":["MEDGEN:309396","UMLS:C1518234"],"synonyms":[{"name":"malignant ovarian serous tumor","type":"exact"},{"name":"ovarian serous tumor, malignant","type":"exact"}],"termid":"MONDO:0024885","xrefs":{"Monarch":{"xref_id":"0024885"}}}


id: GO:0015865
data:
  {"annotated_genes":["SJAG_04328","SJAG_02050","SJAG_00612","SJAG_03334","SJAG_00760"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015866"},{"annotations":[64693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903790"},{"annotations":[103180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"},{"annotations":[103181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"},{"annotations":[59189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140021"},{"annotations":[59188,104677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990544"},{"annotations":[94718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990549"}]},"cv_name":"biological_process","definition":"The directed movement of a purine nucleotide, any compound consisting of a purine nucleoside esterified with (ortho)phosphate, into, out of or within a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide transport","termid":"GO:0006862"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00612":null,"SJAG_00760":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_04328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"purine nucleotide transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0015865","terms_by_termid":{"GO:0015866":null,"GO:0140021":null,"GO:1903790":null,"GO:1990544":null,"GO:1990549":null,"GO:1990553":null,"GO:1990554":null}}


id: MONDO:0005589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pancreatits that is the result of treatment with thiopurine immunosuppressants such as azathioprine or mercaptopurine.","definition_xrefs":["EFO:0006315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatitis","termid":"MONDO:0004982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"thiopurine immunosuppressant-induced pancreatitis","termid":"MONDO:0005589","xrefs":{"Monarch":{"xref_id":"0005589"}}}


id: PR:P78970
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ceramide synthase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine N-acyltransferase lag1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1A6.09c","secondary_identifiers":["UniProtKB:P78970"],"synonyms":[{"name":"Spom972h-CERS1","type":"exact"},{"name":"longevity assurance factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"longevity assurance protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78970"}


id: GO:0033945
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of cellobiose from the reducing end of xyloglucans consisting of a beta-(1->4) linked glucan carrying alpha-D-xylosyl groups on O-6 of the glucose residues. To be a substrate, the first residue must be unsubstituted, the second residue may bear a xylosyl group, whether further glycosylated or not, and the third residue, which becomes the new terminus by the action of the enzyme, is preferably xylosylated, but this xylose residue must not be further substituted.","definition_xrefs":["EC:3.2.1.150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"oligoxyloglucan reducing-end-specific cellobiohydrolase activity","secondary_identifiers":["MetaCyc:3.2.1.150-RXN"],"synonyms":[{"name":"oligoxyloglucan reducing end-specific cellobiohydrolase activity","type":"related"},{"name":"oligoxyloglucan reducing-end cellobiohydrolase activity","type":"related"}],"termid":"GO:0033945"}


id: MONDO:1010212
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteosarcoma that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoma, non-human animal","termid":"MONDO:0700131"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteosarcoma, non-human animal","secondary_identifiers":["OMIA:001441"],"termid":"MONDO:1010212","xrefs":{"Monarch":{"xref_id":"1010212"}}}


id: GO:0106089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion involved in sprouting angiogenesis.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","GOC:rph","PMID:24177325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell adhesion","termid":"GO:0007162"},{"relation_name":"is_a","term_name":"regulation of cell adhesion involved in sprouting angiogenesis","termid":"GO:0106088"},{"relation_name":"is_a","term_name":"negative regulation of sprouting angiogenesis","termid":"GO:1903671"},{"relation_name":"negatively_regulates","term_name":"cell adhesion involved in sprouting angiogenesis","termid":"GO:0120078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of cell adhesion involved in sprouting angiogenesis","termid":"GO:0106089"}


id: PBO:0091765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating type M-specific polypeptide Mi at silenced MAT3 locus","termid":"PBO:0091765"}


id: PBO:0051499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGSF22 antisense RNA 1","termid":"PBO:0051499"}


id: GO:0006775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving of any of a diverse group of vitamins that are soluble in organic solvents and relatively insoluble in water.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin metabolic process","termid":"GO:0006766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0006766","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"fat-soluble vitamin metabolic process","secondary_identifiers":["Reactome:R-HSA-6806667"],"synonyms":[{"name":"fat-soluble vitamin metabolism","type":"exact"}],"termid":"GO:0006775"}


id: FYPO:0002125
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plasma membrane is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to plasma membrane","termid":"FYPO:0004838"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell periphery during vegetative growth","termid":"FYPO:0005570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein localization to plasma membrane during vegetative growth","synonyms":[{"name":"abnormal protein localisation to plasma membrane during vegetative growth","type":"exact"},{"name":"abnormal protein localization in plasma membrane during vegetative growth","type":"exact"},{"name":"abnormal protein localization to plasma membrane during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002125"}


id: PBO:0086376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ATPase containing the DEAD/H helicase-related sequence motif; null mutant displays increased levels of spontaneous Rad52p foci; SWAT-GFP and mCherry fusion proteins localize to the nucleus","termid":"PBO:0086376"}


id: PBO:0052954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KTN1 antisense RNA 1","termid":"PBO:0052954"}


id: MONDO:0800153
data:
  {"annotated_genes":["SJAG_04577","SJAG_00412","SJAG_00695","SJAG_00636","SJAG_03266","SJAG_00635","SJAG_01461","SJAG_00392","SJAG_03398"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008814"},{"annotations":[87353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008815"},{"annotations":[86824,86825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009376"},{"annotations":[88872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008988"},{"annotations":[86821,86820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009377"},{"annotations":[88617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011717"},{"annotations":[88843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010703"}]},"cv_name":"mondo","definition":"A disorder of amino acid metabolism that has its basis in the disruption of the urea cycle or an inherited hyperammonemia (any specific disease which causes an inherited increased concentration of ammonia in the blood).","direct_ancestors":[{"relation_name":"is_a","term_name":"urea cycle disorder","termid":"MONDO:0004739"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00412":null,"SJAG_00635":null,"SJAG_00636":null,"SJAG_00695":null,"SJAG_01461":null,"SJAG_03266":null,"SJAG_03398":null,"SJAG_04577":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"urea cycle disorder or inherited hyperammonemia","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0800153","terms_by_termid":{"MONDO:0008814":null,"MONDO:0008815":null,"MONDO:0008988":null,"MONDO:0009376":null,"MONDO:0009377":null,"MONDO:0010703":null,"MONDO:0011717":null},"xrefs":{"Monarch":{"xref_id":"0800153"}}}


id: PATO:0001708
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality inhering in an bearer by virtue of the bearer's extension in one dimension.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"size","termid":"PATO:0000117"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-D extent","synonyms":[{"name":"1-D size","type":"exact"}],"termid":"PATO:0001708"}


id: FYPO:0003516
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-ergothioneine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular L-ergothioneine level during vegetative growth","synonyms":[{"name":"increased L-ergothioneine level during vegetative growth","type":"exact"},{"name":"increased cellular L-ergothioneine level during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003516"}


id: PBO:0043505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin associated protein family member 3C","termid":"PBO:0043505"}


id: PR:Q9URV4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC106.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URV4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C106.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.07c","synonyms":[{"name":"Spom972h-SPBC106.07c","type":"exact"}],"termid":"PR:Q9URV4"}


id: MONDO:0006535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cicatricial pemphigoid (obsolete MONDO:0006535)","termid":"MONDO:0006535","xrefs":{"Monarch":{"xref_id":"0006535"}}}


id: PBO:0034077
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_hypermorphosis_relationship_with","termid":"PBO:0034077"}


id: MONDO:0004017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant pineal area germ cell neoplasm","termid":"MONDO:0002073"},{"relation_name":"is_a","term_name":"malignant teratoma","termid":"MONDO:0003514"},{"relation_name":"is_a","term_name":"extragonadal nonseminomatous germ cell tumor","termid":"MONDO:0003578"},{"relation_name":"is_a","term_name":"central nervous system immature teratoma","termid":"MONDO:0003735"},{"relation_name":"is_a","term_name":"pineal region teratoma","termid":"MONDO:0004015"},{"relation_name":"is_a","term_name":"immature teratoma","termid":"MONDO:0024746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pineal region immature teratoma","secondary_identifiers":["UMLS:C1335416","MEDGEN:277516","DOID:6858","NCIT:C6755"],"synonyms":[{"name":"atypical pineal teratoma","type":"exact"},{"name":"immature teratoma of pineal area","type":"exact"},{"name":"immature teratoma of pineal region","type":"exact"},{"name":"immature teratoma of the pineal area","type":"exact"},{"name":"immature teratoma of the pineal region","type":"exact"},{"name":"pineal area immature teratoma","type":"exact"}],"termid":"MONDO:0004017","xrefs":{"Monarch":{"xref_id":"0004017"}}}


id: GO:0070765
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that has aspartic-type endopeptidase activity and contains a presenilin catalytic subunit (either PSEN1 or PSEN2), an APH1 subunit (multiple genes and splice variants exist), nicastrin (NCT), and presenilin enhancer (aka PEN-2 or Psenen), as the core complex. Variants of the complex with different subunit compositions differ in localization and specific substrates. Additionally, variants of the complex exist that contain a additional regulatory subunit as well as the four core subunits; known regulatory subunits include gamma-secretase-activating protein (aka gSAP), TMP1 (aka TMED10), and CD147 antigen (aka basigin). Gamma-secretase cleaves type I transmembrane protein substrates, including the cell surface receptor Notch and the amyloid-beta precursor protein.","definition_xrefs":["GOC:krc","PMID:15890777","PMID:28320827","PMID:15286082","PMID:25565961","PMID:32616437","PMID:17047368","PMID:22122073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"gamma-secretase complex","synonyms":[{"name":"CD147-gamma-secretase complex (APH-1a, PS-1, PEN-2, NCT variant)","type":"narrow"},{"name":"PS1 complex","type":"narrow"},{"name":"PS2 complex","type":"narrow"},{"name":"gamma-secretase complex (APH1A, PSEN1, PSENEN, NCSTN variant)","type":"narrow"},{"name":"gamma-secretase complex (APH1A, PSEN2, PSENEN, NCSTN)","type":"narrow"},{"name":"gamma-secretase complex (APH1B, PSEN1, PSENEN, NCSTN)","type":"narrow"},{"name":"gamma-secretase complex (APH1B, PSEN2, PSENEN, NCSTN)","type":"narrow"},{"name":"presenilin complex","type":"exact"}],"termid":"GO:0070765"}


id: GO:1990752
data:
  {"annotated_genes":["SJAG_02045","SJAG_02761","SJAG_00113","SJAG_00851","SJAG_00140","SJAG_04841","SJAG_00723","SJAG_00030","SJAG_03540","SJAG_02624","SJAG_02040","SJAG_02336","SJAG_02695","SJAG_01297","SJAG_03052","SJAG_01613","SJAG_01196"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97017,105560,99383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903754"},{"annotations":[99078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062194"},{"annotations":[98781,105699,120527,91433,104137,115895,102183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904511"},{"annotations":[102186,101023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036449"},{"annotations":[81747,63078,106472,81189,101025,72453,121014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035371"},{"annotations":[98784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905721"},{"annotations":[93195],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905760"}]},"cv_name":"cellular_component","definition":"Any end of a microtubule. Microtubule ends differ in that the so-called microtubule plus-end is the one that preferentially grows by polymerization, with respect to the minus-end.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"microtubule","termid":"GO:0005874"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00113":null,"SJAG_00140":null,"SJAG_00723":null,"SJAG_00851":null,"SJAG_01196":null,"SJAG_01297":null,"SJAG_01613":null,"SJAG_02040":null,"SJAG_02045":null,"SJAG_02336":null,"SJAG_02624":null,"SJAG_02695":null,"SJAG_02761":null,"SJAG_03052":null,"SJAG_03540":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"microtubule end","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:30726171":null},"termid":"GO:1990752","terms_by_termid":{"GO:0035371":null,"GO:0036449":null,"GO:0062194":null,"GO:1903754":null,"GO:1904511":null,"GO:1905721":null,"GO:1905760":null}}


id: FYECO:0000173
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which zinc chloride was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ZnCl2","synonyms":[{"name":"zinc chloride added","type":"exact"}],"termid":"FYECO:0000173"}


id: MONDO:0020481
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myotonia fluctuans (MF) is a form of potassium-aggravated myotonia (PAM) which is cold insensitive, dramatically fluctuating and profoundly worsened by potassium ingestion.","definition_xrefs":["Orphanet:99734"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium-aggravated myotonia","termid":"MONDO:0018959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotonia fluctuans","secondary_identifiers":["NCIT:C122789","SCTID:715788001","GARD:16904","icd11.foundation:1294270721","MEDGEN:156269","UMLS:C0752355"],"synonyms":[{"name":"Fluctuating myotonia","type":"exact"},{"name":"MF","type":"exact"},{"name":"exercise-induced delayed-onset myotonia","type":"exact"}],"termid":"MONDO:0020481","xrefs":{"Monarch":{"xref_id":"0020481"}}}


id: GO:0033755
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4 sulfur + 4 H2O + O2 = 2 hydrogen sulfide + 2 bisulfite + 2 H+.","definition_xrefs":["PMID:1522063","EC:1.13.11.55"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"sulfur oxygenase/reductase activity","secondary_identifiers":["MetaCyc:1.13.11.55-RXN","RHEA:13957"],"synonyms":[{"name":"SOR","type":"related"},{"name":"sulfur oxygenase activity","type":"broad"},{"name":"sulfur:oxygen oxidoreductase (hydrogen-sulfide- and sulfite-forming) activity","type":"related"},{"name":"sulphur oxygenase/reductase activity","type":"exact"}],"termid":"GO:0033755"}


id: PBO:0069295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 551, pseudogene","termid":"PBO:0069295"}


id: MONDO:0100208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epilepsy syndrome associated with infantile period seizures, complete or nearly-complete seizure remission afterwards, usually good developmental outcome, and dominant transmission with high penetrance in pedigrees. For most affected infants, seizures begin within the first week after term birth. In a minority, however, seizures can begin after the first week but within the first several months of life. At onset, seizures may be highly recurrent, and often feature unilateral tonic limb stiffening that may alternate sides from seizure to seizure, accompanied by cyanosis and autonomic features. Limb shaking movements occur, but not in the evolving rhythmic pattern of tonic-clonic convulsions in older individuals. Neurological examination of the infant is normal between seizures. Although these seizures remit by 4-12 months of age in the majority, 15-30% of those affected have one or more seizure recurrences later, including febrile seizures, focal-onset seizures, and convulsions. Although most affected children show typical development, individuals with mild learning difficulties have been reported in families where the majority develop typically.","direct_ancestors":[{"relation_name":"is_a","term_name":"neonatal/infantile-onset self-limited epilepsy syndrome","termid":"MONDO:0800488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"self-limited familial neonatal-infantile epilepsy","synonyms":[{"name":"SeLFNIE","type":"exact"}],"termid":"MONDO:0100208","xrefs":{"Monarch":{"xref_id":"0100208"}}}


id: MONDO:0011348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital anomaly of the hand or foot, marked by the presence of supernumerary digits.","definition_xrefs":["MESH:D017689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polydactyly","termid":"MONDO:0021003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-syndromic polydactyly","secondary_identifiers":["icd11.foundation:1534380955","MedDRA:10036063","Orphanet:2913"],"synonyms":[{"name":"Extra digits","type":"related"},{"name":"isolated polydactyly","type":"related"},{"name":"isolated polydactyly (disease)","type":"exact"},{"name":"nonsyndromic polydactyly","type":"exact"},{"name":"nonsyndromic polydactyly (disease)","type":"exact"},{"name":"polydactylia","type":"related"},{"name":"supernumerary digits","type":"related"}],"termid":"MONDO:0011348","xrefs":{"Monarch":{"xref_id":"0011348"}}}


id: PBO:0041901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBARP divergent transcript","termid":"PBO:0041901"}


id: GO:0021655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of rhombomere 2 is generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:curators","GOC:dgh","GOC:cls","GOC:dph","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere morphogenesis","termid":"GO:0021593"},{"relation_name":"part_of","term_name":"rhombomere 2 development","termid":"GO:0021568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 2 morphogenesis","termid":"GO:0021655"}


id: GO:0016998
data:
  {"annotated_genes":["SJAG_00667","SJAG_01017"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101968,95830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044347"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of macromolecules that form part of a cell wall.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule catabolic process","termid":"GO:0009057"},{"relation_name":"is_a","term_name":"cell wall macromolecule metabolic process","termid":"GO:0044036"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_01017":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"cell wall macromolecule catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0044039"],"synonyms":[{"name":"cell wall breakdown","type":"related"},{"name":"cell wall catabolism","type":"related"},{"name":"cell wall degradation","type":"related"},{"name":"cellular cell wall macromolecule breakdown","type":"exact"},{"name":"cellular cell wall macromolecule catabolic process","type":"exact"},{"name":"cellular cell wall macromolecule catabolism","type":"exact"},{"name":"cellular cell wall macromolecule degradation","type":"exact"}],"termid":"GO:0016998","terms_by_termid":{"GO:0044347":null}}


id: PBO:0088107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Uroporphyrinogen decarboxylase; catalyzes the fifth step in the heme biosynthetic pathway; localizes to both the cytoplasm and nucleus; a hem12 mutant has phenotypes similar to patients with porphyria cutanea tarda","termid":"PBO:0088107"}


id: GO:0052173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detecting the defenses of another organism.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete response to defenses of other organism (obsolete GO:0052173)","synonyms":[{"name":"response to defenses of other organism during symbiotic interaction","type":"related"},{"name":"response to defenses of other organism involved in symbiotic interaction","type":"related"}],"termid":"GO:0052173"}


id: GO:0014893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a rest stimulus. This process occurs as part of the regulation of muscle adaptation.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to muscle inactivity involved in regulation of muscle adaptation","termid":"GO:0014877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to rest involved in regulation of muscle adaptation","termid":"GO:0014893"}


id: GO:0016058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Maintenance of the excited state of a photoreceptor cell to produce a steady-state current as a result of signals generated by rhodopsin activation by a photon.","definition_xrefs":["GOC:hb","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential in photoreceptor cell","termid":"GO:0016057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of membrane potential in photoreceptor cell by rhodopsin mediated signaling","synonyms":[{"name":"maintenance of rhodopsin mediated signaling","type":"related"},{"name":"maintenance of rhodopsin mediated signalling","type":"exact"}],"termid":"GO:0016058"}


id: PBO:0044816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 108E (pseudogene)","termid":"PBO:0044816"}


id: PBO:0002778
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cryptic Loci Regulator","termid":"PBO:0002778"}


id: PBO:0086466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial aconitase isozyme; similarity to Aco1p, an aconitase required for the TCA cycle; expression induced during growth on glucose, by amino acid starvation via Gcn4p, and repressed on ethanol","termid":"PBO:0086466"}


id: GO:0106156
data:
  {"annotated_genes":["SJAG_05265"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96625],"is_not":false,"summary":null,"term":"GO:0106156"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: protein L-lysine + 2-oxoglutarate + O2 = protein 4-hydroxy-L-lysine + succinate + CO2.","definition_xrefs":["GOC:pde","PMID:24486019","RHEA:57156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140096","GO:0016491"],"is_obsolete":false,"name":"peptidyl-lysine 4-dioxygenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9629946"],"termid":"GO:0106156","terms_by_termid":{"GO:0106156":null}}


id: PBO:0062853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otogelin","termid":"PBO:0062853"}


id: MONDO:0030719
data:
  {"annotated_genes":["SJAG_01400"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88892],"is_not":false,"summary":null,"term":"MONDO:0030719"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"hearing loss, autosomal dominant 82","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1803416","OMIM:619804","UMLS:C5676948"],"synonyms":[{"name":"DFNA82","type":"exact"},{"name":"deafness, autosomal dominant 82","type":"narrow"}],"termid":"MONDO:0030719","terms_by_termid":{"MONDO:0030719":null},"xrefs":{"Monarch":{"xref_id":"0030719"}}}


id: PBO:0072291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 9","termid":"PBO:0072291"}


id: PBO:0056101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LY6/PLAUR domain containing 6","termid":"PBO:0056101"}


id: FYPO:0006792
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which urease activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal urease activity","termid":"FYPO:0003642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"abolished urease activity","synonyms":[{"name":"urease activity abolished","type":"exact"}],"termid":"FYPO:0006792"}


id: MONDO:0019509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cutaneous leukocytoclastic angiitis is a small-vessel vasculitis presenting with palpable purpura and urticarial lesions which predate the purpuric lesions most frequently observed on the legs. Systemic symptoms including fever, cough, hemoptysis, sinusitis, arthralgia, arthritis, myalgia, abdominal pain, diarrhea, hematochezia, paresthesia, weakness, and hematuria may be observed. Skin biopsy reveals exudates rich in neutrophils, endothelial damage, fibrin deposition, and leukocytoclasis in postcapillary venules of small vessels. Cutaneous leukocytoclastic angiitis can be idiopathic (in up to 50% of cases) or secondary to infections, medications (such as antituberculosis medication), collagen vascular diseases, or neoplasms.","definition_xrefs":["Orphanet:889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune complex mediated vasculitis","termid":"MONDO:0015491"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cutaneous leukocytoclastic angiitis","secondary_identifiers":["icd11.foundation:71458216","MEDGEN:881641","UMLS:C4049638","GARD:7851","SCTID:718217000","NCIT:C122919"],"synonyms":[{"name":"cutaneous hypersensitivity vasculitis","type":"exact"},{"name":"cutaneous leukocytoclastic vasculitis","type":"exact"},{"name":"cutaneous small vessel vasculitis","type":"exact"},{"name":"cutaneous small-vessel vasculitis","type":"exact"},{"name":"hypersensitivity angiitis","type":"exact"},{"name":"leukocytoclastic angiitis","type":"related"}],"termid":"MONDO:0019509","xrefs":{"Monarch":{"xref_id":"0019509"}}}


id: PBO:0041723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin dependent protein kinase ID","termid":"PBO:0041723"}


id: GO:0014882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the number of myofibrils. A myofibril is the contractile element of skeletal and cardiac muscle. It is a long, highly organized bundle of actin, myosin, and other proteins that contracts by a sliding filament mechanism.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ef","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle hyperplasia","termid":"GO:0014738"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myofibril number","synonyms":[{"name":"change of myofibril number","type":"exact"}],"termid":"GO:0014882"}


id: PBO:0045482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DS cell adhesion molecule","termid":"PBO:0045482"}


id: MONDO:0016492
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Beta-thalassemias with other manifestations are a group of beta-thalassemias associated with another disorder.","definition_xrefs":["Orphanet:231386"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-thalassemia with other manifestations (obsolete MONDO:0016492)","termid":"MONDO:0016492","xrefs":{"Monarch":{"xref_id":"0016492"}}}


id: PBO:0027297
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-fragmented_septum","termid":"PBO:0027297"}


id: PBO:0058250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4537","termid":"PBO:0058250"}


id: GO:0072126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of glomerular mesangial cell proliferation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glomerular mesangial cell proliferation","termid":"GO:0072124"},{"relation_name":"is_a","term_name":"positive regulation of cell proliferation involved in kidney development","termid":"GO:1901724"},{"relation_name":"positively_regulates","term_name":"glomerular mesangial cell proliferation","termid":"GO:0072110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glomerular mesangial cell proliferation","termid":"GO:0072126"}


id: MONDO:0016938
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal duplication","termid":"MONDO:0000762"},{"relation_name":"is_a","term_name":"chromosome 20 disorder","termid":"MONDO:0700025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial trisomy of chromosome 20","secondary_identifiers":["Orphanet:262692","SCTID:726360002","GARD:20858","MEDGEN:1377617","UMLS:C4518509"],"synonyms":[{"name":"partial duplication of chromosome 20","type":"exact"},{"name":"partial trisomy of chromosome type 20","type":"exact"}],"termid":"MONDO:0016938","xrefs":{"Monarch":{"xref_id":"0016938"}}}


id: MONDO:0007575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete erythrokeratodermia variabilis (obsolete MONDO:0007575)","termid":"MONDO:0007575","xrefs":{"Monarch":{"xref_id":"0007575"}}}


id: GO:0036468
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-dopa + H+ = CO2 + dopamine.","definition_xrefs":["RHEA:12272","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic-L-amino-acid decarboxylase activity","termid":"GO:0004058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-dopa decarboxylase activity","synonyms":[{"name":"4-dihydroxyl-L-phenylalanine decarboxylase activity","type":"exact"},{"name":"DDC activity","type":"exact"},{"name":"DOPA decarboxylase activity","type":"related"}],"termid":"GO:0036468"}


id: PBO:0059616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 28","termid":"PBO:0059616"}


id: MOD:00573
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:353","PubMed:15174056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized lysine biotinylated with biotin hydrazide","synonyms":[{"name":"Lysbiotinhydrazide","type":"related"},{"name":"oxidized Lysine biotinylated with biotin hydrazide","type":"related"}],"termid":"MOD:00573"}


id: PBO:0047981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 1 family member H, pseudogene","termid":"PBO:0047981"}


id: PBO:0014246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vps20 associated protein Vta1 (predicted)","termid":"PBO:0014246"}


id: GO:0002102
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An actin-rich adhesion structure characterized by formation upon cell substrate contact and localization at the substrate-attached part of the cell, contain an F-actin-rich core surrounded by a ring structure containing proteins such as vinculin and talin, and have a diameter of 0.5 mm.","definition_xrefs":["PMID:12837608","PMID:15890982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"actin cytoskeleton","termid":"GO:0015629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015629","GO:0005575"],"is_obsolete":false,"name":"podosome","secondary_identifiers":["Wikipedia:Podosome"],"termid":"GO:0002102"}


id: PBO:0004166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanyl-nucleotide exchange factor Vps901 (predicted)","termid":"PBO:0004166"}


id: PBO:0086288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in copper homeostasis; possible role in vacuolar sorting and processing of secretory proteins; null mutants are hypersensitive to sortin2","termid":"PBO:0086288"}


id: MONDO:0009835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic progressive encephalitis that develops a few years after measles infection and presents with a demyelination of the cerebral cortex.","definition_xrefs":["Orphanet:2806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral encephalitis","termid":"MONDO:0006009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subacute sclerosing panencephalitis","secondary_identifiers":["NANDO:2100245","NORD:1743","MESH:D013344","NANDO:2200899","ICD10CM:A81.1","NANDO:1200195","NCIT:C85171","UMLS:C0038522","EFO:0007502","GARD:7708","NANDO:1200198","ICD9:046.2","OMIM:260470","DOID:8970","MEDGEN:52527","NANDO:1200196","icd11.foundation:1098683540"],"synonyms":[{"name":"Dawson disease","type":"related"},{"name":"Dawson encephalitis","type":"related"},{"name":"Dawson's encephalitis","type":"exact"},{"name":"Immunosuppressive measles encephalitis","type":"exact"},{"name":"SSPE","type":"exact"},{"name":"Subacute inclusion body encephalitis","type":"exact"},{"name":"Subacute sclerosing leukoencephalitis","type":"related"},{"name":"Subacute sclerosing panencephalitis","type":"exact"},{"name":"Subacute sclerosing panencephalitis (disorder) [ambiguous]","type":"exact"},{"name":"Van Bogaert disease","type":"exact"},{"name":"Van Bogaert encephalitis","type":"exact"},{"name":"Van Bogaert's sclerosing leukoencephalitis","type":"exact"},{"name":"panencephalitis, SUBACUTE sclerosing","type":"related"},{"name":"subacute sclerosing leukoencephalopathy","type":"exact"},{"name":"subacute sclerosing panencephalitis","type":"exact"}],"termid":"MONDO:0009835","xrefs":{"Monarch":{"xref_id":"0009835"}}}


id: MONDO:0014524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the FMN2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 47","secondary_identifiers":["MEDGEN:863881","OMIM:616193","DOID:0081211","UMLS:C4015444","GARD:22569"],"synonyms":[{"name":"FMN2 autosomal recessive non-syndromic intellectual disability","type":"exact"},{"name":"MRT47","type":"related"},{"name":"autosomal recessive non-syndromic intellectual disability caused by mutation in FMN2","type":"exact"},{"name":"intellectual developmental disorder, autosomal recessive 47","type":"exact"},{"name":"intellectual disability, autosomal recessive 47","type":"exact"},{"name":"intellectual disability, autosomal recessive type 47","type":"exact"},{"name":"mental retardation, autosomal recessive 47","type":"related"},{"name":"mental retardation, autosomal recessive type 47","type":"exact"}],"termid":"MONDO:0014524","xrefs":{"Monarch":{"xref_id":"0014524"}}}


id: PBO:0028839
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_transcript_length","termid":"PBO:0028839"}


id: PR:Q92345
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdc101 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate decarboxylase C1F8.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F8.07c","synonyms":[{"name":"Spom972h-pdc101","type":"exact"}],"termid":"PR:Q92345"}


id: PBO:0059067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOB4 pseudogene 2","termid":"PBO:0059067"}


id: GO:1900137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chemokine activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"negative regulation of chemotaxis","termid":"GO:0050922"},{"relation_name":"is_a","term_name":"negative regulation of cytokine activity","termid":"GO:0060302"},{"relation_name":"is_a","term_name":"regulation of chemokine activity","termid":"GO:1900136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of chemokine activity","synonyms":[{"name":"down regulation of chemokine activity","type":"exact"},{"name":"down-regulation of chemokine activity","type":"exact"},{"name":"downregulation of chemokine activity","type":"exact"},{"name":"inhibition of chemokine activity","type":"narrow"}],"termid":"GO:1900137"}


id: FYPO:0002976
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at promoters that contain MCB sites is decreased during a cellular response to hydroxyurea.","definition_xrefs":["PMID:24006488","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin at MCB promoters during vegetative growth","termid":"FYPO:0005314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to chromatin at MCB promoters during cellular response to hydroxyurea","synonyms":[{"name":"decreased protein localisation to chromatin at MCB promoters during cellular response to hydroxyurea","type":"exact"},{"name":"decreased protein localization to chromatin at MCB promoters during cellular response to HU","type":"exact"},{"name":"decreased protein localization to chromatin at MCB promoters during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at MCB promoters during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at MCB target genes during cellular response to hydroxyurea","type":"related"},{"name":"decreased protein localization to chromatin at MCB-containing promoters during cellular response to hydroxyurea","type":"exact"},{"name":"reduced protein localization to chromatin at MCB promoters during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0002976"}


id: SO:1000018
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Change of a pyrimidine nucleotide, C or T, into a purine nucleotide, A or G.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transversion","termid":"SO:1000017"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrimidine_to_purine_transversion","synonyms":[{"name":"pyrimidine to purine transversion","type":"exact"}],"termid":"SO:1000018"}


id: FYPO:0005200
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype in which a vegetative cell is inviable and elongated during a cellular response to ultraviolet light.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable elongated vegetative cell during cellular response to UV (obsolete FYPO:0005200)","synonyms":[{"name":"elongated inviable cell during cellular response to UV during vegetative growth","type":"exact"},{"name":"elongated inviable vegetative cell during cellular response to UV","type":"exact"},{"name":"inviable elongated vegetative cell during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"inviable elongated vegetative cell during cellular response to ultraviolet light","type":"exact"},{"name":"lethal; elongated vegetative cell during cellular response to UV","type":"exact"}],"termid":"FYPO:0005200"}


id: PBO:0048175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphatase catalytic subunit 2","termid":"PBO:0048175"}


id: PBO:0084180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone chaperone; involved in regulation of chromatin structure in both transcribed and silenced chromosomal regions; affects transcriptional elongation; has a role in regulation of Ty1 transposition; interacts physically and functionally with Chromatin Assembly Factor-1 (CAF-1)","termid":"PBO:0084180"}


id: MONDO:0002818
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adrenal cortical adenocarcinoma (obsolete MONDO:0002818)","termid":"MONDO:0002818","xrefs":{"Monarch":{"xref_id":"0002818"}}}


id: MONDO:0024351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete familial pityriasis rubra pilaris (obsolete MONDO:0024351)","termid":"MONDO:0024351","xrefs":{"Monarch":{"xref_id":"0024351"}}}


id: GO:0006257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dUDP, deoxyuridine (5'-)diphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside diphosphate catabolic process","termid":"GO:0009198"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide catabolic process","termid":"GO:0009223"},{"relation_name":"is_a","term_name":"dUDP metabolic process","termid":"GO:0046077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"dUDP catabolic process","synonyms":[{"name":"dUDP breakdown","type":"exact"},{"name":"dUDP catabolism","type":"exact"},{"name":"dUDP degradation","type":"exact"}],"termid":"GO:0006257"}


id: PBO:0087561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of Slx5-Slx8 SUMO-targeted ubiquitin ligase (STUbL) complex; role in proteolysis of spindle positioning protein Kar9, DNA repair proteins Rad52p and Rad57p; stimulated by SUMO-modified substrates; contains a C-terminal RING domain; forms nuclear foci upon DNA replication stress; required for maintenance of genome integrity like human ortholog RNF","termid":"PBO:0087561"}


id: GO:0141115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont disrupts or prematurely activates host complement so that its microbial-destroying activities fail.","definition_xrefs":["PMID:34305859","PMID:24312361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host complement activation","termid":"GO:0042784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host complement activation by inactivation of complement proteins","synonyms":[{"name":"suppression of complement activation by another organism by inactivation of complement proteins","type":"broad"}],"termid":"GO:0141115"}


id: FYPO:0002623
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to a glucose stimulus is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"decreased RNA level during cellular response to glucose stimulus","synonyms":[{"name":"decreased RNA accumulation during cellular response to glucose stimulus","type":"related"},{"name":"decreased RNA level during cellular response to glucose","type":"exact"},{"name":"decreased RNA level during cellular response to glucose stimulus during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to glucose stimulus during vegetative growth","type":"exact"},{"name":"decreased mRNA level during cellular response to glucose stimulus","type":"narrow"},{"name":"decreased transcript level during cellular response to glucose stimulus","type":"exact"},{"name":"reduced RNA level during cellular response to glucose stimulus","type":"exact"}],"termid":"FYPO:0002623"}


id: MONDO:1012568
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital mast cell tumor, non-human animal","termid":"MONDO:1011827"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital mast cell tumor, cattle","secondary_identifiers":["OMIA:002578-9913"],"termid":"MONDO:1012568","xrefs":{"Monarch":{"xref_id":"1012568"}}}


id: PBO:0078236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 18","termid":"PBO:0078236"}


id: GO:0001132
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a member of the class of TATA-binding proteins (TBP), including any of the TBP-related factors (TRFs), in order to modulate transcription. The transcription factor may or may not also interact selectively with DNA as well.","definition_xrefs":["PMID:16858867","GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase II transcription factor activity, TBP-class protein binding (obsolete GO:0001132)","synonyms":[{"name":"TATA-binding protein binding RNA polymerase II transcription factor activity","type":"narrow"},{"name":"TBP-class protein binding RNA polymerase II transcription factor activity","type":"exact"},{"name":"TRF protein binding RNA polymerase II transcription factor activity","type":"narrow"}],"termid":"GO:0001132"}


id: SO:0001951
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 23rd residue (a lysine), from the start of the H3 protein is di-methylated.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_methylation_site","termid":"SO:0001701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K23_dimethylation_site","synonyms":[{"name":"H3K23 dimethylation site","type":"exact"},{"name":"H3K23me2","type":"exact"}],"termid":"SO:0001951"}


id: GO:0047383
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-guanidino-1-deoxy-scyllo-inositol 4-phosphate + H2O = 1-guanidino-1-deoxy-scyllo-inositol + phosphate.","definition_xrefs":["EC:3.1.3.40","RHEA:15777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"guanidinodeoxy-scyllo-inositol-4-phosphatase activity","secondary_identifiers":["KEGG_REACTION:R03496","MetaCyc:3.1.3.40-RXN"],"synonyms":[{"name":"1-guanidino-1-deoxy-scyllo-inositol-4-P phosphohydrolase activity","type":"related"},{"name":"1-guanidino-1-deoxy-scyllo-inositol-4-phosphate 4-phosphohydrolase activity","type":"related"},{"name":"1-guanidino-scyllo-inositol 4-phosphatase activity","type":"related"}],"termid":"GO:0047383"}


id: PBO:0069182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 436, pseudogene","termid":"PBO:0069182"}


id: MONDO:0011601
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neonatal intrahepatic cholestasis due to citrin deficiency is a mild subtype of citrin deficiency characterized clinically by low birth weight, failure to thrive, transient intrahepatic cholestasis, multiple aminoacidemia, galactosemia, hypoproteinemia, hepatomegaly, decreased coagulation factors, hemolytic anemia, variable but mostly mild liver dysfunction, and hypoglycemia.","definition_xrefs":["Orphanet:247598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"citrin deficiency","termid":"MONDO:0016602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"neonatal intrahepatic cholestasis due to citrin deficiency","secondary_identifiers":["MESH:C536398","SCTID:717155003","UMLS:C1853942","NANDO:1200979","DOID:0070341","MEDGEN:340091","OMIM:605814","GARD:10214"],"synonyms":[{"name":"NICCD","type":"exact"},{"name":"cholestasis, neonatal intrahepatic, caused by citrin deficiency","type":"related"},{"name":"citrullinemia, type II, neonatal-onset","type":"related"},{"name":"citrullinemia, type II, neonatal-onset, with or without failure to thrive and dyslipidaemia","type":"related"},{"name":"citrullinemia, type II, neonatal-onset, with or without failure to thrive and dyslipidemia","type":"related"},{"name":"neonatal intrahepatic cholestasis caused by citrin deficiency","type":"exact"},{"name":"neonatal intrahepatic cholestasis due to citrin deficiency","type":"exact"},{"name":"neonatal-onset citrullinemia type 2","type":"related"},{"name":"neonatal-onset citrullinemia type II","type":"related"}],"termid":"MONDO:0011601","xrefs":{"Monarch":{"xref_id":"0011601"}}}


id: GO:0034573
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: didemethylisoproturon + H2O = carbamic acid + 4-isopropylaniline.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete didemethylisoproturon amidohydrolase activity (obsolete GO:0034573)","termid":"GO:0034573"}


id: GO:0015112
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of nitrate ions (NO3-) from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"nitrate transmembrane transporter activity","synonyms":[{"name":"nitrite/nitrate porter activity","type":"related"}],"termid":"GO:0015112"}


id: MONDO:0006424
data:
  {"annotated_genes":["SJAG_00991","SJAG_01111","SJAG_00490","SJAG_05313","SJAG_03689","SJAG_05346","SJAG_04213","SJAG_00289","SJAG_04755"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011655"},{"annotations":[88734,88735,88736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011705"},{"annotations":[86968,86967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012252"},{"annotations":[89141,89142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013224"},{"annotations":[88741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859046"}]},"cv_name":"mondo","definition":"A benign, intermediate, or malignant neoplasm that arises from the soft tissue. The most common types are lipomatous (fatty), vascular, smooth muscle, fibrous, and fibrohistiocytic neoplasms.","definition_xrefs":["NCIT:C3377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective and soft tissue neoplasm","termid":"MONDO:0044334"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00289":null,"SJAG_00490":null,"SJAG_00991":null,"SJAG_01111":null,"SJAG_03689":null,"SJAG_04213":null,"SJAG_04755":null,"SJAG_05313":null,"SJAG_05346":null},"genotype_count":0,"is_obsolete":false,"name":"soft tissue neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:387837005","ONCOTREE:SOFT_TISSUE","EFO:1000541","UMLS:C0037579","MEDGEN:11495"],"synonyms":[{"name":"SOFT_TISSUE","type":"related"},{"name":"neoplasm of soft tissue","type":"exact"},{"name":"neoplasm of the soft tissue","type":"exact"},{"name":"soft tissue neoplasm","type":"exact"},{"name":"soft tissue tumor","type":"exact"},{"name":"soft tissue tumors","type":"exact"},{"name":"soft tissue tumour","type":"exact"},{"name":"soft tissue tumours","type":"exact"},{"name":"tumor of soft tissue","type":"exact"},{"name":"tumor of the soft tissue","type":"exact"},{"name":"tumour of soft tissue","type":"exact"},{"name":"tumour of the soft tissue","type":"exact"}],"termid":"MONDO:0006424","terms_by_termid":{"MONDO:0011655":null,"MONDO:0011705":null,"MONDO:0012252":null,"MONDO:0013224":null,"MONDO:0859046":null},"xrefs":{"Monarch":{"xref_id":"0006424"}}}


id: GO:0060723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of cell proliferation involved in embryonic placenta development.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"cell proliferation involved in embryonic placenta development","termid":"GO:0060722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell proliferation involved in embryonic placenta development","termid":"GO:0060723"}


id: PBO:0083282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; partially overlaps the verified essential gene RRP14","termid":"PBO:0083282"}


id: GO:0045564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the TRAIL (TNF-related apoptosis inducing ligand) receptor.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of TRAIL receptor biosynthetic process (obsolete GO:0045564)","synonyms":[{"name":"activation of TRAIL receptor biosynthetic process","type":"narrow"},{"name":"positive regulation of TRAIL receptor anabolism","type":"exact"},{"name":"positive regulation of TRAIL receptor biosynthesis","type":"exact"},{"name":"positive regulation of TRAIL receptor formation","type":"exact"},{"name":"positive regulation of TRAIL receptor synthesis","type":"exact"},{"name":"stimulation of TRAIL receptor biosynthetic process","type":"narrow"},{"name":"up regulation of TRAIL receptor biosynthetic process","type":"exact"},{"name":"up-regulation of TRAIL receptor biosynthetic process","type":"exact"},{"name":"upregulation of TRAIL receptor biosynthetic process","type":"exact"}],"termid":"GO:0045564"}


id: GO:0014708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of somitomeric trunk muscle development.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle organ development","termid":"GO:0048634"},{"relation_name":"regulates","term_name":"somitomeric trunk muscle development","termid":"GO:0002075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of somitomeric trunk muscle development","termid":"GO:0014708"}


id: PBO:0005017
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.56","termid":"PBO:0005017"}


id: PBO:0053679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 865","termid":"PBO:0053679"}


id: PBO:0069822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1108, pseudogene","termid":"PBO:0069822"}


id: null:NCBI Taxonomy id
data:
  {"annotation_feature_type":"gene","cv_name":"organism property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taxon_id","termid":"null:NCBI Taxonomy id"}


id: PBO:0117088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP3R1 and CNRIP1 antisense RNA 1","termid":"PBO:0117088"}


id: PR:P78968
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pzh1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein phosphatase PP-Z (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A7.08","synonyms":[{"name":"Spom972h-pzh1","type":"exact"}],"termid":"PR:P78968"}


id: GO:0099084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in the assembly, arrangement of constituent parts, or disassembly of a postsynaptic specialization, a structure that lies adjacent to the cytoplasmic face of the postsynaptic membrane.","definition_xrefs":["PMID:21525273","GOC:BHF","GOC:sjp","PMID:26834556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"},{"relation_name":"part_of","term_name":"postsynapse organization","termid":"GO:0099173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"postsynaptic specialization organization","synonyms":[{"name":"post synaptic specialization organization","type":"exact"},{"name":"post-synaptic specialization organization","type":"exact"},{"name":"postsynaptic specialization organisation","type":"exact"}],"termid":"GO:0099084"}


id: GO:0035744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that contributes to cytokine production by a T-helper 1 cell.","definition_xrefs":["GOC:BHF","CL:0000545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell cytokine production","termid":"GO:0035743"},{"relation_name":"part_of","term_name":"T-helper 1 type immune response","termid":"GO:0042088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"T-helper 1 cell cytokine production","synonyms":[{"name":"Th1 cell cytokine production","type":"exact"}],"termid":"GO:0035744"}


id: PBO:0048335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 46","termid":"PBO:0048335"}


id: PBO:0071050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 52","termid":"PBO:0071050"}


id: PBO:0041977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 18","termid":"PBO:0041977"}


id: MONDO:0019594
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete 46,XY disorder of sex development due to a testosterone synthesis defect (obsolete MONDO:0019594)","secondary_identifiers":["Orphanet:90783"],"synonyms":[{"name":"46,XY DSD due to a testosterone synthesis defect","type":"exact"}],"termid":"MONDO:0019594","xrefs":{"Monarch":{"xref_id":"0019594"}}}


id: GO:0050688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the antiviral response of a cell or organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"regulates","term_name":"defense response to virus","termid":"GO:0051607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of defense response to virus","synonyms":[{"name":"regulation of antiviral response","type":"exact"}],"termid":"GO:0050688"}


id: MONDO:0100254
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A progressive complex neurodevelopmental condition caused by variants in the CACNA1A gene. Phenotypic onset (usually) occurs around age 1 and most often includes intellectual disability but can also include epileptic encephalopathy, benign paroxysmal torticollis of infancy and paroxysmal tonic upgaze psychomotor delay, learning difficulties, absence epilepsy, episodic ataxia, and hemiplegic migraines.","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"},{"relation_name":"is_a","term_name":"complex neurodevelopmental disorder with motor features","termid":"MONDO:0100516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"CACNA1A-related complex neurodevelopmental disorder","termid":"MONDO:0100254","xrefs":{"Monarch":{"xref_id":"0100254"}}}


id: MONDO:1010149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tricho-dento-osseous-like syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"},{"relation_name":"is_a","term_name":"skeletal dysplasia, non-human animal","termid":"MONDO:1012973"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tricho-dento-osseous-like syndrome, non-human animal","secondary_identifiers":["OMIA:002109"],"termid":"MONDO:1010149","xrefs":{"Monarch":{"xref_id":"1010149"}}}


id: MONDO:0013604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any myopia (disease) in which the cause of the disease is a mutation in the ZNF644 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 21, autosomal dominant","secondary_identifiers":["UMLS:C3279997","OMIM:614167","MEDGEN:481627"],"synonyms":[{"name":"MYP21","type":"related"},{"name":"ZNF644 myopia (disease)","type":"exact"},{"name":"myopia (disease) caused by mutation in ZNF644","type":"exact"},{"name":"myopia 21, autosomal dominant","type":"exact"}],"termid":"MONDO:0013604","xrefs":{"Monarch":{"xref_id":"0013604"}}}


id: GO:1904397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of neuromuscular junction development.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:7722643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuromuscular junction development","termid":"GO:1904396"},{"relation_name":"is_a","term_name":"negative regulation of synapse organization","termid":"GO:1905809"},{"relation_name":"negatively_regulates","term_name":"neuromuscular junction development","termid":"GO:0007528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuromuscular junction development","synonyms":[{"name":"down regulation of NMJ stability","type":"related"},{"name":"down regulation of neuromuscular junction development","type":"exact"},{"name":"down regulation of neuromuscular junction organization","type":"exact"},{"name":"down regulation of neuromuscular junction stability","type":"related"},{"name":"down-regulation of NMJ stability","type":"related"},{"name":"down-regulation of neuromuscular junction development","type":"exact"},{"name":"down-regulation of neuromuscular junction organization","type":"exact"},{"name":"down-regulation of neuromuscular junction stability","type":"related"},{"name":"downregulation of NMJ stability","type":"related"},{"name":"downregulation of neuromuscular junction development","type":"exact"},{"name":"downregulation of neuromuscular junction organization","type":"exact"},{"name":"downregulation of neuromuscular junction stability","type":"related"},{"name":"inhibition of NMJ stability","type":"related"},{"name":"inhibition of neuromuscular junction development","type":"narrow"},{"name":"inhibition of neuromuscular junction organization","type":"narrow"},{"name":"inhibition of neuromuscular junction stability","type":"related"},{"name":"negative regulation of NMJ stability","type":"related"},{"name":"negative regulation of neuromuscular junction organization","type":"exact"},{"name":"negative regulation of neuromuscular junction stability","type":"related"}],"termid":"GO:1904397"}


id: PBO:0065205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRP38 domain containing A pseudogene 2","termid":"PBO:0065205"}


id: GO:0016093
data:
  {"annotated_genes":["SJAG_04954"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016095"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving polyprenols, prenols with more than 4 isoprenoid residues, which may be all-trans, or a mixture of cis and trans.","definition_xrefs":["PMID:11108713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"},{"relation_name":"is_a","term_name":"isoprenoid metabolic process","termid":"GO:0006720"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"polyprenol metabolic process","references_by_uniquename":{"GO_REF:0000104":null},"synonyms":[{"name":"polyprenol metabolism","type":"exact"}],"termid":"GO:0016093","terms_by_termid":{"GO:0016095":null}}


id: GO:0047938
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-glucose 6-phosphate = beta-D-glucose 6-phosphate.","definition_xrefs":["EC:5.1.3.15","MetaCyc:GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glucose-6-phosphate 1-epimerase activity","secondary_identifiers":["RHEA:16249"],"synonyms":[{"name":"D-glucose-6-phosphate 1-epimerase activity","type":"related"},{"name":"glucose-6 phosphate 1-epimerase activity","type":"exact"}],"termid":"GO:0047938"}


id: GO:2001216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of hydroxymethylglutaryl-CoA reductase (NADPH) activity.","definition_xrefs":["GOC:al"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity (obsolete GO:2001216)","synonyms":[{"name":"negative regulation of 3-hydroxy-3-methylglutaryl-coenzyme A reductase activity","type":"related"},{"name":"negative regulation of HMG-CoA reductase activity","type":"related"}],"termid":"GO:2001216"}


id: MONDO:0015335
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"}],"gene_count":0,"genotype_count":0,"name":"obsolete Mendelian syndromes with cleft lip/palate (obsolete MONDO:0015335)","secondary_identifiers":["Orphanet:139039"],"synonyms":[{"name":"orofacial clefting syndrome","type":"exact"}],"termid":"MONDO:0015335","xrefs":{"Monarch":{"xref_id":"0015335"}}}


id: MONDO:0005685
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete bullous pemphigoid (obsolete MONDO:0005685)","termid":"MONDO:0005685","xrefs":{"Monarch":{"xref_id":"0005685"}}}


id: FYPO:0004216
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which monomethylation of lysine at position 20 of histone H4 does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H4-K20 monomethylation during vegetative growth","termid":"FYPO:0008179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002274","FYPO:0000002","FYPO:0005447","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"abolished histone H4-K20 monomethylation during vegetative growth","synonyms":[{"name":"abolished histone H4 K20 monomethylation during vegetative growth","type":"exact"},{"name":"abolished histone H4-K20 monomethylation during mitotic cell cycle","type":"related"},{"name":"abolished histone H4K20me1 during vegetative growth","type":"exact"},{"name":"abolished histone lysine H4 K20 monomethylation during vegetative growth","type":"exact"},{"name":"histone H4-K20 monomethylation abolished during vegetative growth","type":"exact"},{"name":"histone H4-K20 monomethylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0004216"}


id: PBO:0076951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming growth factor beta 1 induced transcript 1","termid":"PBO:0076951"}


id: MONDO:0003637
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare benign lung tumor with perivascular epithelioid cell differentiation. It is composed of round or oval cells with abundant clear or eosinophilic cytoplasm and distinct cell borders. The vast majority of patients are asymptomatic and the tumors are discovered incidentally. Excision is curative.","definition_xrefs":["NCIT:C38152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung benign neoplasm","termid":"MONDO:0002732"},{"relation_name":"is_a","term_name":"benign PEComa","termid":"MONDO:0020581"},{"relation_name":"is_a","term_name":"lung PEComa","termid":"MONDO:0020588"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clear cell-sugar-tumor of the lung","secondary_identifiers":["MEDGEN:232370","DOID:5763","UMLS:C1333065"],"synonyms":[{"name":"CCSTL","type":"exact"},{"name":"Sugar tumor","type":"exact"},{"name":"Sugar tumour","type":"exact"},{"name":"clear cell-Sugar-tumor of lung","type":"exact"},{"name":"clear cell-Sugar-tumor of the lung","type":"exact"},{"name":"lung clear cell tumor","type":"exact"},{"name":"lung clear cell tumour","type":"exact"},{"name":"lung clear cell-sugar-tumor","type":"related"}],"termid":"MONDO:0003637","xrefs":{"Monarch":{"xref_id":"0003637"}}}


id: MONDO:0002156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the fallopian tube.","direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fallopian tube disorder","secondary_identifiers":["NCIT:C26771","MEDGEN:8774","MESH:D005184","SCTID:128134005","DOID:1962","EFO:0009548","UMLS:C0015556"],"synonyms":[{"name":"disease of fallopian tube","type":"exact"},{"name":"disease or disorder of fallopian tube","type":"exact"},{"name":"disorder of fallopian tube","type":"exact"},{"name":"fallopian tube disease","type":"exact"},{"name":"fallopian tube disease or disorder","type":"exact"},{"name":"fallopian tube disorder","type":"exact"}],"termid":"MONDO:0002156","xrefs":{"Monarch":{"xref_id":"0002156"}}}


id: GO:0019251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cobalamin (vitamin B12) in the absence of oxygen.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cobalamin biosynthetic process","termid":"GO:0009236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0044281","GO:0008150","GO:0006766"],"is_obsolete":false,"name":"anaerobic cobalamin biosynthetic process","secondary_identifiers":["MetaCyc:COBALSYN-PWY"],"synonyms":[{"name":"anaerobic cobalamin anabolism","type":"exact"},{"name":"anaerobic cobalamin biosynthesis","type":"exact"},{"name":"anaerobic cobalamin formation","type":"exact"},{"name":"anaerobic cobalamin synthesis","type":"exact"},{"name":"anaerobic vitamin B12 biosynthesis","type":"exact"},{"name":"anaerobic vitamin B12 biosynthetic process","type":"exact"},{"name":"cobalamin biosynthesis, anaerobic","type":"exact"},{"name":"cobalamin biosynthetic process, anaerobic","type":"exact"},{"name":"vitamin B12 biosynthesis, anaerobic","type":"exact"},{"name":"vitamin B12 biosynthetic process, anaerobic","type":"exact"}],"termid":"GO:0019251"}


id: GO:0010678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any cellular process that decreases the rate, extent or frequency of the chemical reactions and pathways involving carbohydrates carried out by repression of transcription.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular carbohydrate metabolic process by negative regulation of transcription, DNA-templated (obsolete GO:0010678)","synonyms":[{"name":"negative regulation of cellular carbohydrate metabolic process by negative regulation of transcription, DNA-dependent","type":"exact"},{"name":"negative regulation of cellular carbohydrate metabolic process by repression of transcription","type":"exact"},{"name":"negative regulation of cellular carbohydrate metabolic process by transcriptional repression","type":"exact"}],"termid":"GO:0010678"}


id: PBO:0081935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zn regulated GTPase metalloprotein activator 1E","termid":"PBO:0081935"}


id: PBO:0111869
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PP2A","termid":"PBO:0111869"}


id: GO:0072537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in the morphology or behavior of a fibroblast resulting from exposure to an activating factor such as a cellular or soluble ligand.","definition_xrefs":["GOC:mah","GOC:BHF","CL:0000057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation","termid":"GO:0001775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fibroblast activation","termid":"GO:0072537"}


id: PBO:0084299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Invertase; sucrose hydrolyzing enzyme; seven closely related but non-identical invertase genes have been described in yeast (SUC1-5, 7, 8) but only SUC2 is in the reference strain (S288C)","termid":"PBO:0084299"}


id: MONDO:0003451
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete laryngeal neuroendocrine tumor (obsolete MONDO:0003451)","termid":"MONDO:0003451","xrefs":{"Monarch":{"xref_id":"0003451"}}}


id: GO:0035511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Removal of the methyl group from one or more nucleotides within a DNA molecule involving the oxidation (i.e. electron loss) of one or more atoms.","definition_xrefs":["PMID:18775698","PMID:16482161","PMID:12594517"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidative DNA demethylation (obsolete GO:0035511)","termid":"GO:0035511"}


id: PBO:0080131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VANGL planar cell polarity protein 1","termid":"PBO:0080131"}


id: PBO:0074674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 59A","termid":"PBO:0074674"}


id: PR:Q9P7B2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps802 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7B2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S8-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC521.05","synonyms":[{"name":"Spom972h-rps802","type":"exact"}],"termid":"PR:Q9P7B2"}


id: MONDO:0014346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary mucosal leukokeratosis","termid":"MONDO:0015748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"white sponge nevus 2","secondary_identifiers":["MEDGEN:862758","UMLS:C4014321","DOID:0081288","OMIM:615785","GARD:16012"],"synonyms":[{"name":"WHITE sponge NEVUS 2","type":"related"},{"name":"WSN2","type":"related"},{"name":"White sponge Nevus type 2","type":"exact"},{"name":"white sponge nevus 2","type":"exact"}],"termid":"MONDO:0014346","xrefs":{"Monarch":{"xref_id":"0014346"}}}


id: GO:1901021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of calcium ion transmembrane transporter activity.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of calcium ion transmembrane transporter activity (obsolete GO:1901021)","synonyms":[{"name":"activation of calcium ion transmembrane transporter activity","type":"narrow"},{"name":"up regulation of calcium ion transmembrane transporter activity","type":"exact"},{"name":"up-regulation of calcium ion transmembrane transporter activity","type":"exact"},{"name":"upregulation of calcium ion transmembrane transporter activity","type":"exact"}],"termid":"GO:1901021"}


id: GO:0046854
data:
  {"annotated_genes":["SJAG_01571","SJAG_03170","SJAG_02289","SJAG_00063","SJAG_02613","SJAG_03131","SJAG_00053","SJAG_04537","SJAG_04930","SJAG_01863","SJAG_05330","SJAG_00114","SJAG_00296","SJAG_04545"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93031,95036,98510,112985,113110,120343],"is_not":false,"summary":null,"term":"GO:0046854"},{"annotations":[93660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902635"},{"annotations":[59784,92222],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902647"},{"annotations":[62332,73298,64060,62461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036092"},{"annotations":[119395],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902648"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phosphatidylinositol phosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol biosynthetic process","termid":"GO:0006661"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00063":null,"SJAG_00114":null,"SJAG_00296":null,"SJAG_01571":null,"SJAG_01863":null,"SJAG_02289":null,"SJAG_02613":null,"SJAG_03131":null,"SJAG_03170":null,"SJAG_04537":null,"SJAG_04545":null,"SJAG_04930":null,"SJAG_05330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylinositol phosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0046837"],"synonyms":[{"name":"PIP biosynthesis","type":"exact"},{"name":"PtdInsP biosynthesis","type":"exact"},{"name":"phosphatidylinositol phosphate biosynthesis","type":"exact"},{"name":"phosphatidylinositol phosphate phosphorylation","type":"narrow"},{"name":"phosphatidylinositol phosphorylation","type":"related"},{"name":"phosphoinositide phosphorylation","type":"narrow"}],"termid":"GO:0046854","terms_by_termid":{"GO:0036092":null,"GO:0046854":null,"GO:1902635":null,"GO:1902647":null,"GO:1902648":null}}


id: MONDO:0060713
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness, congenital heart defects, and posterior embryotoxon","secondary_identifiers":["UMLS:C1866053","MESH:C566604","MEDGEN:355614","OMIM:617992"],"synonyms":[{"name":"DCHE","type":"related"},{"name":"deafnes, congenital heart defects, and posterior embryotoxon","type":"related"}],"termid":"MONDO:0060713","xrefs":{"Monarch":{"xref_id":"0060713"}}}


id: PBO:0072696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUSC1 antisense RNA 1","termid":"PBO:0072696"}


id: PBO:0074916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 87","termid":"PBO:0074916"}


id: GO:0004068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-aspartate = beta-alanine + CO2.","definition_xrefs":["EC:4.1.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"aspartate 1-decarboxylase activity","secondary_identifiers":["RHEA:19497","MetaCyc:ASPDECARBOX-RXN"],"synonyms":[{"name":"L-aspartate 1-carboxy-lyase (beta-alanine-forming)","type":"related"},{"name":"L-aspartate 1-carboxy-lyase activity","type":"related"},{"name":"L-aspartate alpha-decarboxylase activity","type":"related"},{"name":"aspartate alpha-decarboxylase activity","type":"related"},{"name":"aspartic alpha-decarboxylase","type":"broad"}],"termid":"GO:0004068"}


id: PBO:0066608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rhox homeobox family member 1","termid":"PBO:0066608"}


id: PBO:0088261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TruA family tRNA/ U2 snRNA pseudouridine synthase Lsp1","termid":"PBO:0088261"}


id: MONDO:0010529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of spinocerebellar degeneration characterized by onset in infancy of hypotonia, ataxia, sensorineural deafness, developmental delay, esotropia, and optic atrophy, and by a progressive course leading to death in childhood. It has been described one family with at least six affected males from five different sibships (connected through carrier females). It is transmitted as an X-linked recessive trait.","definition_xrefs":["Orphanet:85297"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"X-linked cerebellar ataxia","termid":"MONDO:0016612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"X-linked spinocerebellar ataxia type 3","secondary_identifiers":["GARD:9981","MEDGEN:337124","icd11.foundation:261426817","OMIM:301790","MESH:C537315","DOID:0111831","SCTID:719817002","UMLS:C1844936"],"synonyms":[{"name":"SCAX3","type":"exact"},{"name":"Scax3","type":"related"},{"name":"X-linked ataxia-deafness syndrome","type":"exact"},{"name":"ataxia-deafness syndrome X-linked","type":"related"},{"name":"ataxia-deafness syndrome, X-linked","type":"related"},{"name":"spinocerebellar ataxia X-linked type 3","type":"related"},{"name":"spinocerebellar ataxia, X-linked 3","type":"related"},{"name":"spinocerebellar ataxia, X-linked type 3","type":"exact"}],"termid":"MONDO:0010529","xrefs":{"Monarch":{"xref_id":"0010529"}}}


id: MONDO:0030935
data:
  {"annotated_genes":["SJAG_07005"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87368],"is_not":false,"summary":null,"term":"MONDO:0030935"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex II deficiency, nuclear type","termid":"MONDO:0031230"}],"gene_count":1,"genes_by_uniquename":{"SJAG_07005":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 2 deficiency, nuclear type 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1742371","UMLS:C5436933","GARD:16429","OMIM:619166"],"synonyms":[{"name":"MC2DN2","type":"exact"},{"name":"mitochondrial complex 2 deficiency, nuclear type 2","type":"exact"},{"name":"mitochondrial complex II deficiency, nuclear type 2","type":"exact"}],"termid":"MONDO:0030935","terms_by_termid":{"MONDO:0030935":null},"xrefs":{"Monarch":{"xref_id":"0030935"}}}


id: FYPO:0007078
data:
  {"alleles_by_uniquename":{"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121505,121508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000590"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell executes a meiotic cell cycle process normally (i.e. indistinguishably from wild type). A meiotic cell cycle process is any of the processes that form part of the meiotic cell cycle, and thereby ensures successive accurate and complete genome replication and meiotic chromosome segregation.","definition_xrefs":["GO:0022402","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00601":null,"SJAG_01355":null},"genotype_count":2,"genotypes_by_uniquename":{"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal meiotic cell cycle process","references_by_uniquename":{"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_00601","SJAG_01355"],"single_locus_genotype_uniquenames":["cox6delta","rip1delta"],"termid":"FYPO:0007078","terms_by_termid":{"FYPO:0000590":null}}


id: MONDO:0005453
data:
  {"annotated_genes":["SJAG_04781","SJAG_02431","SJAG_03703","SJAG_03145","SJAG_02730","SJAG_04901","SJAG_03764"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87750,87749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013567"},{"annotations":[87121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013011"},{"annotations":[88449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013770"},{"annotations":[88448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013769"},{"annotations":[87959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013261"},{"annotations":[87960,87961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013262"},{"annotations":[87203,87204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014548"},{"annotations":[87202,87201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014550"},{"annotations":[88500,88499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032915"},{"annotations":[89175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013367"},{"annotations":[88393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008542"}]},"cv_name":"mondo","definition":"A heart disease that is present at birth. Representative examples include atrial septal defect, ventricular septal defect, tetralogy of Fallot, and patent foramen ovale.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"},{"relation_name":"is_a","term_name":"congenital anomaly of cardiovascular system","termid":"MONDO:0024239"}],"gene_count":7,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_02730":null,"SJAG_03145":null,"SJAG_03703":null,"SJAG_03764":null,"SJAG_04781":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congenital heart disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:746.84","DOID:1682","ICD9:746.89","ICD9:746.9","MESH:D006330","EFO:0005207","MEDGEN:57501","SCTID:13213009","UMLS:C0152021","NCIT:C95834"],"synonyms":[{"name":"Abnormality, heart","type":"related"},{"name":"abnormalities, heart","type":"related"},{"name":"congenital anomaly of heart","type":"exact"},{"name":"congenital heart defect","type":"exact"},{"name":"congenital heart defects","type":"exact"},{"name":"defect, congenital heart","type":"related"},{"name":"defects, congenital heart","type":"related"},{"name":"heart abnormalities","type":"related"},{"name":"heart abnormality","type":"related"},{"name":"heart defect","type":"exact"},{"name":"heart defect, congenital","type":"related"},{"name":"heart malformation","type":"broad"},{"name":"heart, malformation Of","type":"related"},{"name":"heart-congenital defect","type":"related"}],"termid":"MONDO:0005453","terms_by_termid":{"MONDO:0008542":null,"MONDO:0013011":null,"MONDO:0013261":null,"MONDO:0013262":null,"MONDO:0013367":null,"MONDO:0013567":null,"MONDO:0013769":null,"MONDO:0013770":null,"MONDO:0014548":null,"MONDO:0014550":null,"MONDO:0032915":null},"xrefs":{"Monarch":{"xref_id":"0005453"}}}


id: PBO:0059397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPS30 divergent transcript","termid":"PBO:0059397"}


id: GO:1903514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of calcium ion from endoplasmic reticulum to cytosol.","definition_xrefs":["GOC:BHF","GO_REF:0000078","PMID:16402920","GOC:rl","GOC:mtg_cardiac_conduct_nov11","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"release of sequestered calcium ion into cytosol","termid":"GO:0051209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"release of sequestered calcium ion into cytosol by endoplasmic reticulum","synonyms":[{"name":"calcium ion transport from endoplasmic reticulum to cytosol","type":"broad"}],"termid":"GO:1903514"}


id: GO:0005111
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2 fibroblast growth factor receptor (FGFR2).","definition_xrefs":["GOC:fb_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor binding","termid":"GO:0005104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"type 2 fibroblast growth factor receptor binding","synonyms":[{"name":"FGFR2 binding","type":"exact"},{"name":"FGFR2 ligand","type":"narrow"},{"name":"heartless binding","type":"exact"},{"name":"heartless ligand","type":"narrow"},{"name":"type 2 fibroblast growth factor receptor ligand","type":"narrow"}],"termid":"GO:0005111"}


id: PBO:0069788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1074, pseudogene","termid":"PBO:0069788"}


id: PBO:0078988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA suppressor (TTA) 1-1","termid":"PBO:0078988"}


id: GO:0047325
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 3,4,5,6-tetrakisphosphate + ATP = 1D-myo-inositol 1,3,4,5,6-pentakisphosphate + ADP + H+.","definition_xrefs":["RHEA:12452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate kinase activity","termid":"GO:0051765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"inositol-3,4,5,6-tetrakisphosphate 1-kinase activity","secondary_identifiers":["MetaCyc:2.7.1.134-RXN","EC:2.7.1.134","Reactome:R-HSA-994137","KEGG_REACTION:R03479","Reactome:R-HSA-1855162"],"synonyms":[{"name":"1D-myo-inositol-tetrakisphosphate 1-kinase activity","type":"related"},{"name":"1D-myo-inositol-trisphosphate 5-kinase activity","type":"related"},{"name":"1D-myo-inositol-trisphosphate 6-kinase activity","type":"related"},{"name":"ATP:1D-myo-inositol-3,4,5,6-tetrakisphosphate 1-phosphotransferase activity","type":"related"},{"name":"inositol 3,4,5,6-tetrakisphosphate 1-kinase activity","type":"exact"},{"name":"inositol tetrakisphosphate 1-kinase activity","type":"broad"},{"name":"inositol-trisphosphate 5-kinase activity","type":"related"},{"name":"inositol-trisphosphate 6-kinase activity","type":"related"}],"termid":"GO:0047325"}


id: PBO:0058405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4775","termid":"PBO:0058405"}


id: PBO:0080975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 10","termid":"PBO:0080975"}


id: MONDO:0010195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Weissenbacher-Zweymuller syndrome (obsolete MONDO:0010195)","termid":"MONDO:0010195","xrefs":{"Monarch":{"xref_id":"0010195"}}}


id: GO:0045754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of acetate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"regulation of acetate catabolic process","termid":"GO:0045734"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"acetate catabolic process","termid":"GO:0045733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of acetate catabolic process","synonyms":[{"name":"activation of acetate catabolic process","type":"narrow"},{"name":"positive regulation of acetate breakdown","type":"exact"},{"name":"positive regulation of acetate catabolism","type":"exact"},{"name":"positive regulation of acetate degradation","type":"exact"},{"name":"stimulation of acetate catabolic process","type":"narrow"},{"name":"up regulation of acetate catabolic process","type":"exact"},{"name":"up-regulation of acetate catabolic process","type":"exact"},{"name":"upregulation of acetate catabolic process","type":"exact"}],"termid":"GO:0045754"}


id: PBO:0091103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER exit protein","termid":"PBO:0091103"}


id: FYPO:0004799
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the second meiotic nuclear division does not occur during a cycle of zygotic meiosis and sporulation. Zygotic meiosis and sporulation take place under conditions of continuous nitrogen starvation, in which haploid cells of the opposite mating types conjugate to form diploid zygotes that proceed immediately to undergo meiosis and sporulation.","definition_xrefs":["PMID:25891897","PomBase:mah","PMID:22558440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished meiosis II","termid":"FYPO:0003379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abolished zygotic meiosis II","synonyms":[{"name":"abolished meiosis II during zygotic meiosis","type":"exact"},{"name":"abolished zygotic second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0004799"}


id: PBO:0080908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma","termid":"PBO:0080908"}


id: GO:0033443
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an AAA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"AAA codon-amino acid adaptor activity","synonyms":[{"name":"lysine tRNA","type":"related"}],"termid":"GO:0033443"}


id: MONDO:0010246
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Female restricted epilepsy with intellectual disability is a rare X-linked epilepsy syndrome characterized by febrile or afebrile seizures (mainly tonic-clonic, but also absence, myoclonic, and atonic) starting in the first years of life and, in most cases, developmental delay and intellectual disability of variable severity. Behavioral disturbances (e.g. autistic features, hyperactivity, and aggressiveness) are also frequently associated. This disease affects exclusively females, with male carriers being unaffected, despite an X-linked inheritance.","definition_xrefs":["Orphanet:101039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked intellectual disability-epilepsy syndrome","termid":"MONDO:0016160"},{"relation_name":"is_a","term_name":"genetic developmental and epileptic encephalopathy","termid":"MONDO:0100062"},{"relation_name":"is_a","term_name":"X-linked complex neurodevelopmental disorder","termid":"MONDO:0100148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 9","secondary_identifiers":["MESH:C564715","OMIM:300088","UMLS:C1848137","DOID:0060848","GARD:10806","MEDGEN:338393","NANDO:1200599"],"synonyms":[{"name":"DEE9","type":"exact"},{"name":"EFMR","type":"exact"},{"name":"EIEE9","type":"exact"},{"name":"Juberg Hellman syndrome","type":"exact"},{"name":"Juberg-Hellman syndrome","type":"exact"},{"name":"PCDH19 early infantile epileptic encephalopathy","type":"exact"},{"name":"PCDH19-related FLE","type":"related"},{"name":"PCDH19-related female-limited epilepsy","type":"related"},{"name":"PCDH19-related infantile epileptic encephalopathy","type":"related"},{"name":"developmental and epileptic encephalopathy 9","type":"exact"},{"name":"developmental and epileptic encephalopathy, 9","type":"exact"},{"name":"early infantile epileptic encephalopathy 9","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in PCDH19","type":"exact"},{"name":"early infantile epileptic encephalopathy type 9","type":"exact"},{"name":"early infantile female-limited epilecptic encephalopathy","type":"exact"},{"name":"epilepsy and intellectual disability limited to females","type":"related"},{"name":"epilepsy and mental retardation limited to females","type":"related"},{"name":"epilepsy, female restricted, with intellectual disability","type":"related"},{"name":"epilepsy, female restricted, with mental retardation","type":"related"},{"name":"epilepsy, female-restricted, with intellectual disability","type":"related"},{"name":"epilepsy, female-restricted, with mental retardation","type":"related"},{"name":"epileptic encephalopathy, early infantile, 9","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 9","type":"exact"},{"name":"familial epilepsy and intellectual disability limited to females","type":"exact"},{"name":"familial epilepsy and mental retardation limited to females","type":"exact"},{"name":"female restricted epilepsy with intellectual deficit","type":"related"},{"name":"female restricted epilepsy with intellectual disability","type":"exact"},{"name":"female restricted epilepsy with mental retardation","type":"exact"}],"termid":"MONDO:0010246","xrefs":{"Monarch":{"xref_id":"0010246"}}}


id: MONDO:0011064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"lethal chondrodysplasia, Seller type","secondary_identifiers":["OMIM:601376","Orphanet:1421","GARD:3226","MEDGEN:318622","UMLS:C1832410","MESH:C563330"],"synonyms":[{"name":"chondrodysplasia, lethal, with long bone angulation and mixed bone density","type":"related"},{"name":"lethal chondrodysplasia seller type","type":"related"}],"termid":"MONDO:0011064","xrefs":{"Monarch":{"xref_id":"0011064"}}}


id: GO:1904763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a chaperone-mediated autophagy translocation complex.","definition_xrefs":["GOC:pad","PMID:18644871","GOC:PARL","GO_REF:0000079","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"chaperone-mediated autophagy","termid":"GO:0061684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0006914","GO:0030163","GO:0065003"],"is_obsolete":false,"name":"chaperone-mediated autophagy translocation complex assembly","synonyms":[{"name":"CMA receptor complex assembly","type":"related"},{"name":"CMA receptor complex formation","type":"related"},{"name":"CMA translocation complex assembly","type":"exact"},{"name":"CMA translocation complex formation","type":"exact"},{"name":"chaperone-mediated autophagy receptor complex assembly","type":"related"},{"name":"chaperone-mediated autophagy receptor complex formation","type":"related"},{"name":"chaperone-mediated autophagy translocation complex formation","type":"exact"}],"termid":"GO:1904763"}


id: PBO:0088558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase (class I) H3-K9 specific Clr6","termid":"PBO:0088558"}


id: PBO:0065986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid early transcript 1M pseudogene","termid":"PBO:0065986"}


id: MONDO:0800329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"febrile seizures, familial","termid":"MONDO:0000032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"febrile seizures, familial, 3a","secondary_identifiers":["MEDGEN:442807","UMLS:C2751756"],"synonyms":[{"name":"FEB3A","type":"exact"}],"termid":"MONDO:0800329","xrefs":{"Monarch":{"xref_id":"0800329"}}}


id: MOD:00503
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-(cis-delta 5)-tetradecaenoylglycine.","definition_xrefs":["PubMed:11955008","Unimod:134#G","PubMed:6436247","PubMed:11955007","RESID:AA0059#var","PubMed:1386601","PubMed:7543369","OMSSA:78","PubMed:1326520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(cis-delta 5)-tetradecaenoylglycine","synonyms":[{"name":"(cis-delta 5)-tetradecaenoyl","type":"related"},{"name":"Myristoleyl","type":"related"},{"name":"N-(C14:1 aliphatic acyl)glycine","type":"exact"},{"name":"myristoleylation (one double bond)","type":"exact"},{"name":"ntermpepmyristoyeylationg","type":"exact"}],"termid":"MOD:00503"}


id: GO:0003020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which information about the levels of oxygen are received and are converted to a molecular signal by chemoreceptors in the carotid bodies and the aortic bodies.","definition_xrefs":["ISBN:0323031951","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of hypoxia","termid":"GO:0070483"},{"relation_name":"part_of","term_name":"detection of hypoxic conditions in blood by chemoreceptor signaling","termid":"GO:0002007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of reduced oxygen by chemoreceptor signaling","synonyms":[{"name":"detection of reduced oxygen by chemoreceptor signalling","type":"exact"}],"termid":"GO:0003020"}


id: GO:0035178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fine-tuning the spatial position of an organism in response to variability in their environment. For example, reorientation of an organism in the direction of a food source.","definition_xrefs":["PMID:10880478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotory behavior","termid":"GO:0007626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"turning behavior","synonyms":[{"name":"turning behaviour","type":"exact"}],"termid":"GO:0035178"}


id: GO:0023039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a physical damage signal causes activation of a receptor.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal initiation by physical damage (obsolete GO:0023039)","synonyms":[{"name":"signal initiation by physical damage","type":"exact"}],"termid":"GO:0023039"}


id: PBO:0057700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1288","termid":"PBO:0057700"}


id: GO:0038190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by vascular endothelial growth factor (VEGF) binding to a neuropilin protein on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:rl","GOC:BHF","PMID:12852851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular endothelial growth factor signaling pathway","termid":"GO:0038084"},{"relation_name":"is_a","term_name":"neuropilin signaling pathway","termid":"GO:0038189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"VEGF-activated neuropilin signaling pathway","synonyms":[{"name":"VEGF-Npn-1 signaling","type":"exact"},{"name":"vascular endothelial growth factor-activated neuropilin signaling pathway","type":"exact"}],"termid":"GO:0038190"}


id: PBO:0039139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apical junction component 1 homolog","termid":"PBO:0039139"}


id: GO:0008355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs in response to (repeated) exposure to an olfactory cue.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"associative learning","termid":"GO:0008306"},{"relation_name":"is_a","term_name":"olfactory behavior","termid":"GO:0042048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory learning","termid":"GO:0008355"}


id: PBO:0071147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 11","termid":"PBO:0071147"}


id: FYPO:0004835
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is abolished during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleus during vegetative growth","termid":"FYPO:0001424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to nucleus during cellular response to hydrogen peroxide","synonyms":[{"name":"abolished protein localisation to nucleus during cellular response to hydrogen peroxide","type":"exact"},{"name":"abolished protein localization to nucleus during cellular response to H2O2","type":"exact"},{"name":"abolished protein localization to nucleus during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to nucleus during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"nuclear exclusion during cellular response to hydrogen peroxide","type":"related"},{"name":"nuclear protein exclusion during cellular response to hydrogen peroxide","type":"related"},{"name":"protein localization to nucleus abolished during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0004835"}


id: PBO:0076639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBPL1 pseudogene 1","termid":"PBO:0076639"}


id: MONDO:0009785
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Opsismodysplasia is a skeletal dysplasia characterized by congenital dwarfism and facial dysmorphism.","definition_xrefs":["Orphanet:2746"],"direct_ancestors":[{"relation_name":"is_a","term_name":"severe spondylodysplastic dysplasia","termid":"MONDO:0800080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opsismodysplasia","secondary_identifiers":["GARD:4098","icd11.foundation:2147268863","MESH:C537122","OMIM:258480","SCTID:254068007","MEDGEN:140927","UMLS:C0432219"],"synonyms":[{"name":"OPSISMODYSPLASIA","type":"related"},{"name":"OPSMD","type":"related"},{"name":"opsismodysplasia","type":"exact"}],"termid":"MONDO:0009785","xrefs":{"Monarch":{"xref_id":"0009785"}}}


id: PBO:0051705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate-5-phosphatase E","termid":"PBO:0051705"}


id: PBO:0084064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein (RhoGAP) for Cdc42p and Rho5p; relocalizes from bud neck to cytoplasm upon DNA replication stress","termid":"PBO:0084064"}


id: PBO:0027299
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_cell_cycle_arrest_phenotype","termid":"PBO:0027299"}


id: GO:0032374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of cholesterol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sterol transport","termid":"GO:0032371"},{"relation_name":"regulates","term_name":"cholesterol transport","termid":"GO:0030301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of cholesterol transport","termid":"GO:0032374"}


id: GO:0010428
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a methylated cytosine/unspecified/guanine trinucleotide.","definition_xrefs":["PMID:17239600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide binding","termid":"GO:0000166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"methyl-CpNpG binding","termid":"GO:0010428"}


id: GO:0030178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the Wnt signaling pathway.","definition_xrefs":["GOC:tb","GOC:dph","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of Wnt signaling pathway","termid":"GO:0030111"},{"relation_name":"negatively_regulates","term_name":"Wnt signaling pathway","termid":"GO:0016055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of Wnt signaling pathway","secondary_identifiers":["GO:0045810"],"synonyms":[{"name":"down regulation of Wnt receptor signaling pathway","type":"exact"},{"name":"down regulation of frizzled signaling pathway","type":"exact"},{"name":"down-regulation of Wnt receptor signaling pathway","type":"exact"},{"name":"down-regulation of frizzled signaling pathway","type":"exact"},{"name":"downregulation of Wnt receptor signaling pathway","type":"exact"},{"name":"downregulation of frizzled signaling pathway","type":"exact"},{"name":"inhibition of Wnt receptor signaling pathway","type":"narrow"},{"name":"inhibition of frizzled signaling pathway","type":"narrow"},{"name":"negative regulation of Wnt receptor signaling pathway","type":"exact"},{"name":"negative regulation of Wnt receptor signalling pathway","type":"exact"},{"name":"negative regulation of Wnt-activated signaling pathway","type":"exact"},{"name":"negative regulation of frizzled signaling pathway","type":"exact"},{"name":"negative regulation of frizzled signalling pathway","type":"exact"}],"termid":"GO:0030178"}


id: PBO:0048105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FTX transcript, XIST regulator","termid":"PBO:0048105"}


id: MONDO:0006390
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroendocrine carcinoma of the prostate gland with unfavorable prognosis, composed of small cells containing neurosecretory granules. Approximately half of the cases show a mixture of small cells and adenocarcinoma cells.","definition_xrefs":["NCIT:C6766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell carcinoma","termid":"MONDO:0000402"},{"relation_name":"is_a","term_name":"prostate neuroendocrine neoplasm","termid":"MONDO:0002477"},{"relation_name":"is_a","term_name":"prostate carcinoma","termid":"MONDO:0005159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate small cell carcinoma","secondary_identifiers":["EFO:1000499","MEDGEN:266251","SCTID:396198006","ONCOTREE:PRSCC","DOID:7141","UMLS:C1300585"],"synonyms":[{"name":"Oat cell carcinoma of prostate","type":"exact"},{"name":"Oat cell carcinoma of the prostate","type":"exact"},{"name":"PRSCC","type":"related"},{"name":"prostate Oat cell carcinoma","type":"exact"},{"name":"prostate gland small cell carcinoma","type":"exact"},{"name":"prostate oat cell carcinoma","type":"exact"},{"name":"prostate small cell NEC","type":"exact"},{"name":"prostate small cell carcinoma","type":"exact"},{"name":"prostate small cell neuroendocrine carcinoma","type":"exact"},{"name":"small cell carcinoma of prostate","type":"exact"},{"name":"small cell carcinoma of prostate gland","type":"exact"},{"name":"small cell carcinoma of the prostate","type":"exact"}],"termid":"MONDO:0006390","xrefs":{"Monarch":{"xref_id":"0006390"}}}


id: MONDO:1012012
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"aniridia with cataract, non-human animal","termid":"MONDO:1011974"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aniridia with cataract, horse","secondary_identifiers":["OMIA:000045-9796"],"termid":"MONDO:1012012","xrefs":{"Monarch":{"xref_id":"1012012"}}}


id: MONDO:0007401
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Craniosynostosis, Dandy-Walker malformation and hydrocephalus is a malformation disorder characterized by sagittal craniosynostosis, Dandy-Walker malformation, hydrocephalus, craniofacial dysmorphism (including dolichocephaly, hypertelorism, micrognathia, positional ear deformity) and variable developmental delay. The inheritance pattern appears to be autosomal dominant.","definition_xrefs":["Orphanet:1538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocephalus","termid":"MONDO:0001150"},{"relation_name":"is_a","term_name":"familial scaphocephaly syndrome","termid":"MONDO:0015704"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0020022"],"is_obsolete":false,"name":"craniosynostosis-Dandy-Walker malformation-hydrocephalus syndrome","secondary_identifiers":["MESH:C563973","GARD:998","OMIM:123155","MEDGEN:325006","UMLS:C1838347","SCTID:720813007"],"synonyms":[{"name":"Braddock Jones Superneau syndrome","type":"related"},{"name":"Braddock-Jones-Superneau syndrome","type":"exact"},{"name":"Dandy-Walker malformation with sagittal craniosynostosis and hydrocephalus","type":"related"},{"name":"HDCPH1","type":"related"},{"name":"craniosynostosis-Dandy-Walker malformation-hydrocephalus syndrome","type":"exact"},{"name":"hydrocephalus, autosomal dominant","type":"related"},{"name":"sagittal craniosynostosis, Dandy-Walker malformation and hydrocephalus","type":"related"}],"termid":"MONDO:0007401","xrefs":{"Monarch":{"xref_id":"0007401"}}}


id: PATO:0002267
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"edge shape","termid":"PATO:0002267"}


id: PBO:0086449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mannosyltransferase involved in protein glycosylation; member of the KRE2/MNT1 mannosyltransferase family; KTR7 has a paralog, KTR5, that arose from the whole genome duplication","termid":"PBO:0086449"}


id: GO:0033541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A fatty acid beta-oxidation pathway by which fatty acids having cis-double bonds on odd-numbered carbons are degraded. In this pathway, a cis-3-enoyl-CoA is generated by the core beta-oxidation pathway, and then converted to a trans-2-enoyl-CoA, which can return to the core beta-oxidation pathway for complete degradation. Fatty acid beta-oxidation begins with the addition of coenzyme A to a fatty acid, and ends when only two or three carbons remain (as acetyl-CoA or propionyl-CoA respectively).","definition_xrefs":["MetaCyc:PWY-5137","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid beta-oxidation","termid":"GO:0006635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"fatty acid beta-oxidation, unsaturated, odd number","termid":"GO:0033541"}


id: PBO:0069555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 827, pseudogene","termid":"PBO:0069555"}


id: FYPO:0002226
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells in which cell shape is altered and cell size remains normal. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, abnormal cell shape, normal cell size (obsolete FYPO:0002226)","termid":"FYPO:0002226"}


id: FYPO:0005335
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through mitotic cell cycle arrest at the mitotic G2/M phase transition occurs abnormally when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:al","PMID:26804466","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormally arrested mitotic cell cycle progression","termid":"FYPO:0000502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cell cycle arrest at mitotic G2/M phase transition during glucose starvation","synonyms":[{"name":"abnormal cell cycle arrest at mitotic G2/M phase transition during glucose deprivation","type":"exact"},{"name":"abnormal cell cycle arrest at mitotic G2/M phase transition during glucose limitation","type":"related"},{"name":"abnormal cell cycle arrest in mitotic G2 phase during glucose depletion","type":"exact"},{"name":"abnormal mitotic cell cycle arrest at mitotic G2/M phase transition during glucose starvation","type":"exact"},{"name":"abolished mitotic G2/M phase transition during glucose starvation","type":"related"}],"termid":"FYPO:0005335"}


id: GO:0006301
data:
  {"annotated_genes":["SJAG_00406","SJAG_02667","SJAG_02521","SJAG_00573","SJAG_03898","SJAG_04791","SJAG_00153","SJAG_00611","SJAG_03906","SJAG_01044","SJAG_04816","SJAG_00208","SJAG_00819","SJAG_16460","SJAG_04089","SJAG_02918","SJAG_01221","SJAG_04190"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61221,78870,89825,90447,97830,100057,106245,118970],"is_not":false,"summary":null,"term":"GO:0006301"},{"annotations":[101118,61619,104699,58950,72185,68155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070987"},{"annotations":[106045,79717,97692,104700,72183,74988,79418,76694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042276"},{"annotations":[113612],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1904332"},{"annotations":[100119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019985"}]},"cv_name":"biological_process","definition":"The conversion of DNA-damage induced single-stranded gaps into large molecular weight DNA after replication. Includes pathways that remove replication-blocking lesions in conjunction with DNA replication.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair","termid":"GO:0006281"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00208":null,"SJAG_00406":null,"SJAG_00573":null,"SJAG_00611":null,"SJAG_00819":null,"SJAG_01044":null,"SJAG_01221":null,"SJAG_02521":null,"SJAG_02667":null,"SJAG_02918":null,"SJAG_03898":null,"SJAG_03906":null,"SJAG_04089":null,"SJAG_04190":null,"SJAG_04791":null,"SJAG_04816":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"postreplication repair","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Wikipedia:Postreplication_repair"],"synonyms":[{"name":"postreplication DNA repair","type":"exact"}],"termid":"GO:0006301","terms_by_termid":{"GO:0006301":null,"GO:0019985":null,"GO:0042276":null,"GO:0070987":null,"GO:1904332":null}}


id: PBO:0069917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1209, pseudogene","termid":"PBO:0069917"}


id: GO:0034788
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,3-dihydroxy-2'-carboxybiphenyl + O2 = 2-hydroxy-6-oxo-6-(2-carboxyphenyl)-hexa-2,4-dienoate + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,3-dihydroxy-2'-carboxybiphenyl 1,2-dioxygenase activity (obsolete GO:0034788)","termid":"GO:0034788"}


id: PBO:0082095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphogluconolactonase; catalyzes the second step of the pentose phosphate pathway; weak multicopy suppressor of los1-1 mutation; homologous to Sol2p and Sol1p; SOL3 has a paralog, SOL4, that arose from the whole genome duplication","termid":"PBO:0082095"}


id: MONDO:0850461
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A fetal alcohol spectrum disorder that is characterized by one or more deficits in neurocognition and in self-regulation plus two or more deficits in adaptive functioning, with at least 1 in communication or social communication and interaction.","definition_xrefs":["DOID:0081052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fetal alcohol spectrum disorder","termid":"MONDO:0000408"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurobehavioral disorder with prenatal alcohol exposure","termid":"MONDO:0850461","xrefs":{"Monarch":{"xref_id":"0850461"}}}


id: PBO:0055512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2946","termid":"PBO:0055512"}


id: GO:2000059
data:
  {"annotated_genes":["SJAG_00052","SJAG_00475","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"},{"annotations":[79064,108782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032435"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of ubiquitin-dependent protein catabolic process.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of proteolysis involved in protein catabolic process","termid":"GO:1903051"},{"relation_name":"is_a","term_name":"regulation of ubiquitin-dependent protein catabolic process","termid":"GO:2000058"},{"relation_name":"negatively_regulates","term_name":"ubiquitin-dependent protein catabolic process","termid":"GO:0006511"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00475":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ubiquitin-dependent protein catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of protein degradation tagging activity","type":"broad"},{"name":"negative regulation of protein ubiquitination during ubiquitin-dependent protein breakdown","type":"narrow"},{"name":"negative regulation of protein ubiquitination during ubiquitin-dependent protein catabolic process","type":"narrow"},{"name":"negative regulation of protein ubiquitination during ubiquitin-dependent protein catabolism","type":"narrow"},{"name":"negative regulation of protein ubiquitination during ubiquitin-dependent protein degradation","type":"narrow"},{"name":"negative regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process","type":"narrow"},{"name":"negative regulation of protein ubiquitinylation during ubiquitin-dependent protein catabolic process","type":"narrow"},{"name":"negative regulation of protein ubiquitinylation during ubiquitin-dependent protein catabolism","type":"narrow"},{"name":"negative regulation of protein ubiquitylation during ubiquitin-dependent protein catabolic process","type":"narrow"},{"name":"negative regulation of protein ubiquitylation during ubiquitin-dependent protein catabolism","type":"narrow"}],"termid":"GO:2000059","terms_by_termid":{"GO:0032435":null,"GO:1905785":null}}


id: PATO:0002049
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved around an axis and towards the side.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rotational curvature","termid":"PATO:0001787"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lateral and rotional curvature","termid":"PATO:0002049"}


id: PBO:0082720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Paf1p complex involved in transcription elongation; binds to and modulates the activity of RNA polymerases I and II; required for expression of a subset of genes, including cell cycle-regulated genes; involved in SER3 repression by helping to maintain SRG1 transcription-dependent nucleosome occupancy; homolog of human PD2/hPAF1","termid":"PBO:0082720"}


id: _global:assayed_region
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extension_relations","definition":"Relation between a phenotype and the region of the genome in which the phenotype was assayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assayed_using","termid":"_global:assayed_using"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assayed_region","termid":"_global:assayed_region"}


id: MONDO:0023158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fitz-Hugh-Curtis syndrome (FHCS) is a condition in which a woman has swelling of the tissue covering the liver as a result of having pelvic inflammatory disease (PID). Symptoms most often include pain in the upper right abdomen just below the ribs, fever, nausea, or vomiting. The symptoms of pelvic inflammatory disease - pain in the lower abdomen and vaginal discharge -are oftenpresent as well. FHCS is usually caused by an infection of chlamydia or gonorrhea that leads to PID; it is not known why PIDprogresses toFHCS in some women. Fitz-Hugh-Curtis syndrome is treatedwith antibiotics.","definition_xrefs":["GARD:0006452"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"chlamydia infectious disease","termid":"MONDO:0021697"},{"relation_name":"is_a","term_name":"pelvic inflammatory disease","termid":"MONDO:0000922"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fitz-Hugh-Curtis syndrome","secondary_identifiers":["MESH:C537936","UMLS:C0549148","MEDGEN:639814","SCTID:237041005"],"synonyms":[{"name":"gonococcal perihepatitis","type":"narrow"},{"name":"perihepatitis syndrome","type":"related"}],"termid":"MONDO:0023158","xrefs":{"Monarch":{"xref_id":"0023158"}}}


id: PBO:0030823
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_chlorpromazine","termid":"PBO:0030823"}


id: PBO:0084318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Karyopherin; a carrier protein involved in nuclear import of proteins; importin beta homolog","termid":"PBO:0084318"}


id: GO:0018613
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 9-fluorenone + 2 NADPH + O2 = 2 NADP+ + 3,4-dihydroxy-3,4-dihydro-9-fluorenone.","definition_xrefs":["UM-BBD_reactionID:r0409"],"gene_count":0,"genotype_count":0,"name":"obsolete 9-fluorenone dioxygenase activity (obsolete GO:0018613)","termid":"GO:0018613"}


id: PBO:0082580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cholinephosphotransferase; required for phosphatidylcholine biosynthesis and for inositol-dependent regulation of EPT1 transcription; CPT1 has a paralog, EPT1, that arose from the whole genome duplication","termid":"PBO:0082580"}


id: PBO:0063711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PGM5 antisense RNA 1","termid":"PBO:0063711"}


id: PBO:0069380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 640, pseudogene","termid":"PBO:0069380"}


id: GO:0033752
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pentane-2,4-dione + O2 = acetate + 2-oxopropanal.","definition_xrefs":["EC:1.13.11.50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acetylacetone-cleaving enzyme activity","secondary_identifiers":["RHEA:12877"],"synonyms":[{"name":"Dke1","type":"related"},{"name":"acetylacetone dioxygenase activity","type":"related"},{"name":"acetylacetone-cleaving enzyme","type":"related"},{"name":"acetylacetone:oxygen oxidoreductase activity","type":"related"},{"name":"diketone cleaving dioxygenase activity","type":"related"},{"name":"diketone cleaving enzyme","type":"related"}],"termid":"GO:0033752"}


id: PBO:0040307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+/K+ transporting subunit beta","termid":"PBO:0040307"}


id: PBO:0064517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit L pseudogene 1","termid":"PBO:0064517"}


id: PBO:0060091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 38","termid":"PBO:0060091"}


id: CHEBI:18019
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"An L-alpha-amino acid; the L-isomer of lysine.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lysine","termid":"CHEBI:18019"}


id: PBO:0040528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-2-microglobulin","termid":"PBO:0040528"}


id: PBO:0027536
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ATP-dependent_5'-3'_DNA_helicase_activity","termid":"PBO:0027536"}


id: PBO:0120364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import factor Mix23","termid":"PBO:0120364"}


id: GO:0009722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a cytokinin stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of hormone stimulus","termid":"GO:0009720"},{"relation_name":"is_a","term_name":"response to cytokinin","termid":"GO:0009735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of cytokinin stimulus","synonyms":[{"name":"perception of cytokinin stimulus","type":"related"}],"termid":"GO:0009722"}


id: MONDO:1011913
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"renal disease, non-human animal","termid":"MONDO:1011909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal cysts, non-human animal","secondary_identifiers":["OMIA:001257"],"termid":"MONDO:1011913","xrefs":{"Monarch":{"xref_id":"1011913"}}}


id: PBO:0080245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 8 pseudogene","termid":"PBO:0080245"}


id: GO:0034854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4,4-dimethyl-3-oxopentanoate + H+ = 3,3-dimethyl-2-butanone + CO2.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 4,4-dimethyl-3-oxopentanoate decarboxylase activity (obsolete GO:0034854)","termid":"GO:0034854"}


id: GO:0035875
data:
  {"annotated_genes":["SJAG_04126","SJAG_01805","SJAG_01601","SJAG_03989","SJAG_03681","SJAG_00600","SJAG_04259","SJAG_01082","SJAG_00229","SJAG_03926"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117761,115083,95610,106321,103614,115643,109658,116357,100935,103089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990813"}]},"cv_name":"biological_process","definition":"The process in which the association between sister chromatids of a replicated chromosome along the length of the centromeric region is maintained as chromosomes condense, attach to the spindle in a bipolar orientation, and congress to the metaphase plate during a meiotic cell cycle.","definition_xrefs":["PMID:1708436","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of meiotic sister chromatid cohesion","termid":"GO:0034090"},{"relation_name":"part_of","term_name":"meiotic sister chromatid cohesion, centromeric","termid":"GO:0051754"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00600":null,"SJAG_01082":null,"SJAG_01601":null,"SJAG_01805":null,"SJAG_03681":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04126":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"maintenance of meiotic sister chromatid cohesion, centromeric","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"maintenance of centromeric meiotic sister chromatin cohesion","type":"exact"},{"name":"maintenance of meiotic sister chromatin cohesion at centromere","type":"exact"},{"name":"maintenance of sister chromatin cohesion at centromere at meiosis I","type":"exact"}],"termid":"GO:0035875","terms_by_termid":{"GO:1990813":null}}


id: MONDO:0700300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progeria","termid":"MONDO:0020732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303"],"is_obsolete":false,"name":"achalasia-progeroid syndrome","secondary_identifiers":["OMIM:621123"],"termid":"MONDO:0700300","xrefs":{"Monarch":{"xref_id":"0700300"}}}


id: PBO:0072409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 14","termid":"PBO:0072409"}


id: PBO:0036375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial PPR repeat protein Ppr10","termid":"PBO:0036375"}


id: GO:0033406
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a UCC codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0060090","GO:0005488"],"is_obsolete":false,"name":"UCC codon-amino acid adaptor activity","synonyms":[{"name":"TCC codon-amino acid adaptor activity","type":"exact"},{"name":"serine tRNA","type":"related"}],"termid":"GO:0033406"}


id: PBO:0061129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMBR antisense RNA 1","termid":"PBO:0061129"}


id: SO:0001955
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polypeptide region that proves structure in a protein that affects the stability of the protein.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_region","termid":"SO:0000839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"protein_stability_element","synonyms":[{"name":"protein stability element","type":"related"}],"termid":"SO:0001955"}


id: PBO:0065060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl endopeptidase like","termid":"PBO:0065060"}


id: PBO:0028785
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_methylation_at_protein_coding_gene","termid":"PBO:0028785"}


id: GO:1903553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of extracellular vesicular exosome assembly.","definition_xrefs":["GO_REF:0000058","PMID:24105262","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle assembly","termid":"GO:1902117"},{"relation_name":"is_a","term_name":"regulation of extracellular exosome assembly","termid":"GO:1903551"},{"relation_name":"positively_regulates","term_name":"extracellular exosome assembly","termid":"GO:0071971"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of extracellular exosome assembly","synonyms":[{"name":"activation of extracellular vesicular exosome assembly","type":"narrow"},{"name":"positive regulation of extracellular vesicular exosome assembly","type":"related"},{"name":"up regulation of extracellular vesicular exosome assembly","type":"exact"},{"name":"up-regulation of extracellular vesicular exosome assembly","type":"exact"},{"name":"upregulation of extracellular vesicular exosome assembly","type":"exact"}],"termid":"GO:1903553"}


id: PBO:0085062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential small GTPase of the Rho/Rac family of Ras-like proteins; regulated by phosphorylation and ubiquitination; likely involved in protein kinase C (Pkc1p)-dependent signal transduction pathway that controls cell integrity; necessary for oxidant and ramped heat stress-induced cell death; ortholog of mammalian RAC1","termid":"PBO:0085062"}


id: GO:0031243
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the cell outer membrane consisting of the gene products and protein complexes that penetrate the external side of the cell outer membrane only, either directly or via some covalently attached hydrophobic anchor.","definition_xrefs":["GOC:dos","GOC:mah","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of external side of cell outer membrane (obsolete GO:0031243)","synonyms":[{"name":"intrinsic to external leaflet of cell outer membrane","type":"exact"},{"name":"intrinsic to external side of cell outer membrane","type":"narrow"},{"name":"intrinsic to external side of outer membrane","type":"exact"}],"termid":"GO:0031243"}


id: PBO:0044076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage stimulation factor subunit 3","termid":"PBO:0044076"}


id: PBO:0042652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDYL pseudogene 1","termid":"PBO:0042652"}


id: PBO:0077472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 191C","termid":"PBO:0077472"}


id: GO:0046960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An increased in a behavioral response to a repeated stimulus. For example, a shock to the tail of the marine snail Aplysia, to which the snail responds by withdrawing its gill, will result in increased gill withdrawal the next time the skin is touched.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nonassociative learning","termid":"GO:0046958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensitization","secondary_identifiers":["Wikipedia:Sensitization"],"termid":"GO:0046960"}


id: MONDO:0003408
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant tumor that arises from the ovary and is characterized by the presence of malignant germ cell components but lacks a teratoma component.","definition_xrefs":["NCIT:C39986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant germ cell tumor of ovary","termid":"MONDO:0018171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian primitive germ cell tumor","secondary_identifiers":["MEDGEN:275291","DOID:5351","UMLS:C1518727"],"synonyms":[{"name":"ovarian primitive germ cell tumor","type":"exact"}],"termid":"MONDO:0003408","xrefs":{"Monarch":{"xref_id":"0003408"}}}


id: PBO:0088309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase","termid":"PBO:0088309"}


id: GO:1902159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cyclic nucleotide-gated ion channel activity.","definition_xrefs":["GOC:TermGenie","PMID:11420311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"regulation of cyclic nucleotide-gated ion channel activity","synonyms":[{"name":"regulation of cyclic nucleotide activated ion channel activity","type":"exact"},{"name":"regulation of cyclic nucleotide gated ion channel activity","type":"exact"},{"name":"regulation of cyclic nucleotide-activated ion channel activity","type":"exact"}],"termid":"GO:1902159"}


id: GO:0031850
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a delta-type opioid receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opioid receptor binding","termid":"GO:0031628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"delta-type opioid receptor binding","synonyms":[{"name":"delta-type opioid receptor ligand","type":"narrow"},{"name":"enkephalin receptor binding","type":"related"}],"termid":"GO:0031850"}


id: MONDO:0012858
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial hemolytic anemia","termid":"MONDO:0003689"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"primary CD59 deficiency","secondary_identifiers":["GARD:17054","MEDGEN:393582","MESH:C567355","NANDO:2200804","OMIM:612300","Orphanet:169464","UMLS:C2676767"],"synonyms":[{"name":"CD59 deficiency","type":"related"},{"name":"HACD59","type":"related"},{"name":"hemolytic anemia, CD59-mediated, with or without immune-mediated polyneuropathy","type":"related"},{"name":"primary CD59 deficiency","type":"exact"}],"termid":"MONDO:0012858","xrefs":{"Monarch":{"xref_id":"0012858"}}}


id: GO:0008119
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + a thiopurine = S-adenosyl-L-homocysteine + a thiopurine S-methylether.","definition_xrefs":["EC:2.1.1.67"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-methyltransferase activity","termid":"GO:0008172"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"thiopurine S-methyltransferase activity","secondary_identifiers":["MetaCyc:THIOPURINE-S-METHYLTRANSFERASE-RXN","Reactome:R-HSA-9748979","Reactome:R-HSA-5603379","Reactome:R-HSA-158609","Reactome:R-HSA-9748983"],"synonyms":[{"name":"6-thiopurine transmethylase activity","type":"related"},{"name":"S-adenosyl-L-methionine:thiopurine S-methyltransferase activity","type":"related"},{"name":"TPMT","type":"related"},{"name":"mercaptopurine methyltransferase activity","type":"related"},{"name":"thiopurine methyltransferase activity","type":"related"}],"termid":"GO:0008119"}


id: PBO:0077291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 33","termid":"PBO:0077291"}


id: MONDO:0100391
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly t(2;12). (A cytogenetic abnormality that involves a translocation between chromosomes 2 and 12.)","definition_xrefs":["NCIT:C173543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"acute myeloid leukemia, t(2;12)","synonyms":[{"name":"AML, t(2;12)","type":"exact"}],"termid":"MONDO:0100391","xrefs":{"Monarch":{"xref_id":"0100391"}}}


id: GO:0018590
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: methylsilanetriol + O2 + 2 H+ + 2 e- = H2O + hydroxymethylsilanetriol.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete methylsilanetriol hydroxylase activity (obsolete GO:0018590)","termid":"GO:0018590"}


id: PBO:0066845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 145","termid":"PBO:0066845"}


id: MONDO:0021191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malignant ependymoma (obsolete MONDO:0021191)","termid":"MONDO:0021191","xrefs":{"Monarch":{"xref_id":"0021191"}}}


id: MONDO:0044704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that involves the oropharynx.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pharyngeal squamous cell carcinoma","termid":"MONDO:0000536"},{"relation_name":"is_a","term_name":"oropharyngeal carcinoma","termid":"MONDO:0044926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"oropharynx squamous cell carcinoma","secondary_identifiers":["UMLS:C0280313","Orphanet:500478","MEDGEN:76094","NCIT:C8181","GARD:17928","ONCOTREE:OPHSC","icd11.foundation:839740136"],"synonyms":[{"name":"epidermoid carcinoma of oropharynx","type":"exact"},{"name":"epidermoid carcinoma of the oropharynx","type":"exact"},{"name":"oropharyngeal epidermoid carcinoma","type":"exact"},{"name":"oropharyngeal squamous cell carcinoma","type":"exact"},{"name":"oropharyngeal throat squamous cell cancer","type":"exact"},{"name":"squamous cell carcinoma of oropharynx","type":"exact"},{"name":"squamous cell carcinoma of the oropharynx","type":"related"}],"termid":"MONDO:0044704","xrefs":{"Monarch":{"xref_id":"0044704"}}}


id: PATO:0001892
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An odor quality of having decreased odor.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"odorous","termid":"PATO:0001331"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased odor","termid":"PATO:0001892"}


id: PBO:0046223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 16","termid":"PBO:0046223"}


id: MONDO:0044618
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete CLCN4-related X-linked intellectual disability syndrome (obsolete MONDO:0044618)","termid":"MONDO:0044618","xrefs":{"Monarch":{"xref_id":"0044618"}}}


id: PBO:0091721
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene structure update","termid":"PBO:0091721"}


id: GO:0097040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phthiocerol, a lipid-based 1,3-glycol consisting of (3S,4R)-3-methoxy-4-methylnonacosane having (9R)- and (11S)-hydroxy substituents.","definition_xrefs":["PMID:9201977","GOC:ecd","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid biosynthetic process","termid":"GO:0008610"},{"relation_name":"is_a","term_name":"glycol biosynthetic process","termid":"GO:0042845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"phthiocerol biosynthetic process","synonyms":[{"name":"phthiocerol anabolism","type":"exact"},{"name":"phthiocerol biosynthesis","type":"exact"},{"name":"phthiocerol formation","type":"exact"},{"name":"phthiocerol synthesis","type":"exact"}],"termid":"GO:0097040"}


id: MONDO:0007609
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any gingival fibromatosis in which the cause of the disease is a mutation in the SOS1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary gingival fibromatosis","termid":"MONDO:0016070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibromatosis, gingival, 1","secondary_identifiers":["MEDGEN:1647111","OMIM:135300","GARD:6509","UMLS:C4551558"],"synonyms":[{"name":"GGF1","type":"related"},{"name":"GINGF","type":"related"},{"name":"GINGF1","type":"related"},{"name":"HGF1","type":"related"},{"name":"SOS1 gingival fibromatosis","type":"exact"},{"name":"SOS1 hereditary gingival fibromatosis","type":"exact"},{"name":"fibromatosis gingival, hereditary, 1","type":"related"},{"name":"fibromatosis, gingival, 1","type":"exact"},{"name":"fibromatosis, gingival, hereditary","type":"related"},{"name":"fibromatosis, gingival, type 1","type":"exact"},{"name":"gingival fibromatosis caused by mutation in SOS1","type":"exact"},{"name":"gingival fibromatosis, 1","type":"related"},{"name":"hereditary gingival fibromatosis caused by mutation in SOS1","type":"exact"},{"name":"hereditary gingival fibromatosis, 1","type":"related"}],"termid":"MONDO:0007609","xrefs":{"Monarch":{"xref_id":"0007609"}}}


id: MONDO:1011500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epidermolysis bullosa simplex that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa, dog","termid":"MONDO:1010750"},{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex, non-human animal","termid":"MONDO:1011428"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermolysis bullosa simplex, dog","secondary_identifiers":["OMIA:002082-9615"],"termid":"MONDO:1011500","xrefs":{"Monarch":{"xref_id":"1011500"}}}


id: GO:0072467
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that occurs in response to signals generated as a result of cell shape checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete response to cell shape checkpoint signaling (obsolete GO:0072467)","synonyms":[{"name":"cell shape checkpoint effector process","type":"exact"},{"name":"response to signal involved in cell shape checkpoint","type":"exact"}],"termid":"GO:0072467"}


id: PBO:0075516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAM pointed domain containing ETS transcription factor","termid":"PBO:0075516"}


id: GO:0010215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cellulose microfibril, any of the cellulose structures laid down in orthogonal layers in a plant cell wall.","definition_xrefs":["PMID:12468730","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix organization","termid":"GO:0030198"},{"relation_name":"part_of","term_name":"plant-type cell wall assembly","termid":"GO:0071668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0071554"],"is_obsolete":false,"name":"cellulose microfibril organization","synonyms":[{"name":"cellulose microfibril organisation","type":"exact"}],"termid":"GO:0010215"}


id: MONDO:0002076
data:
  {"annotated_genes":["SJAG_02231"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008259"}]},"cv_name":"mondo","definition":"Abnormal presence of air in the pleural cavity.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pleural disorder","termid":"MONDO:0002037"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02231":null},"genotype_count":0,"is_obsolete":false,"name":"pneumothorax","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1946559257","SCTID:36118008","MEDGEN:19365","DOID:1673","MESH:D011030","NCIT:C38006","ICD9:512.8","UMLS:C0032326","HP:0002107"],"synonyms":[{"name":"pneumothorax","type":"exact"},{"name":"pneumothorax (disease)","type":"exact"}],"termid":"MONDO:0002076","terms_by_termid":{"MONDO:0008259":null},"xrefs":{"Monarch":{"xref_id":"0002076"}}}


id: MONDO:0004284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malignant cystic nephroma (obsolete MONDO:0004284)","termid":"MONDO:0004284","xrefs":{"Monarch":{"xref_id":"0004284"}}}


id: SO:0000306
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A nucleotide modified by methylation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_DNA_base","termid":"SO:0000305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylated_DNA_base_feature","synonyms":[{"name":"methylated base feature","type":"exact"}],"termid":"SO:0000306"}


id: PBO:0116978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBXO16 antisense RNA 1","termid":"PBO:0116978"}


id: PBO:0044567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in azoospermia like","termid":"PBO:0044567"}


id: FYPO:0004725
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the nuclear envelope has one or more extensions that protrude into the cytoplasm during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:15772152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope morphology during vegetative growth","termid":"FYPO:0000769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0002403","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"nuclear envelope protrusion present during mitotic interphase","synonyms":[{"name":"nuclear envelope deformation during mitotic interphase","type":"related"},{"name":"nuclear envelope protrusion present during interphase","type":"exact"},{"name":"nuclear envelope protrusion present during interphase during mitotic cell cycle","type":"related"},{"name":"nuclear envelope protrusion present during interphase during vegetative growth","type":"exact"},{"name":"protruding nuclear envelope during mitotic interphase","type":"exact"}],"termid":"FYPO:0004725"}


id: MONDO:0040998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pasteurellosis","termid":"MONDO:0005901"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pasteurella multocida infectious disease","secondary_identifiers":["SCTID:197718007","UMLS:C1260911","MEDGEN:226779"],"synonyms":[{"name":"infection by Pasteurella multocida","type":"exact"},{"name":"infection caused by Pasteurella multocida","type":"related"}],"termid":"MONDO:0040998","xrefs":{"Monarch":{"xref_id":"0040998"}}}


id: GO:0035960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of ergosterol biosynthetic process by modulating the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:16055745","GOC:dgf","PMID:11533229"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of ergosterol biosynthetic process by regulation of transcription from RNA polymerase II promoter (obsolete GO:0035960)","synonyms":[{"name":"regulation of ergosterol anabolism by regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of ergosterol anabolism by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ergosterol biosynthesis by regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of ergosterol biosynthesis by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ergosterol biosynthetic process by regulation of transcription from Pol II promoter","type":"related"},{"name":"regulation of ergosterol formation by regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of ergosterol formation by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ergosterol synthesis by regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of ergosterol synthesis by regulation of transcription from RNA polymerase II promoter","type":"related"}],"termid":"GO:0035960"}


id: PBO:0069444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 709, pseudogene","termid":"PBO:0069444"}


id: GO:0018061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a N-terminal peptidyl-phenylalanine residue by either oxidative deamination or by transamination and subsequent reduction to form peptidyl-L-3-phenyllactic acid.","definition_xrefs":["RESID:AA0128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-phenylalanine modification","termid":"GO:0018207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-L-3-phenyllactic acid biosynthetic process from peptidyl-phenylalanine","synonyms":[{"name":"peptidyl-L-3-phenyllactic acid anabolism from peptidyl-phenylalanine","type":"exact"},{"name":"peptidyl-L-3-phenyllactic acid formation from peptidyl-phenylalanine","type":"exact"},{"name":"peptidyl-L-3-phenyllactic acid synthesis from peptidyl-phenylalanine","type":"exact"}],"termid":"GO:0018061"}


id: GO:0033554
data:
  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id: GO:0097610
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id: PBO:0056148
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id: PBO:0046851
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id: FYPO:0000185
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id: PBO:0081527
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id: GO:0016412
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id: GO:1990861
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id: GO:0060481
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id: PBO:0050027
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id: PBO:0044123
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id: PR:Q10106
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id: PATO:0001282
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id: PBO:0085036
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id: GO:0030963
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id: PBO:0070251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 194 pseudogene","termid":"PBO:0070251"}


id: GO:0080076
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to the oxygen atom of a caffeoyl CoA molecule.","definition_xrefs":["PMID:19077165"],"gene_count":0,"genotype_count":0,"name":"obsolete caffeoyl CoA:S-adenosyl-L-methionine O-methyltransferase activity (obsolete GO:0080076)","termid":"GO:0080076"}


id: GO:0043993
data:
  {"annotated_genes":["SJAG_02773"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93227],"is_not":false,"summary":null,"term":"GO:0043993"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H3 L-lysine (position 18) = CoA + histone H3 N6-acetyl-L-lysine (position 18).","definition_xrefs":["PMID:18552846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 acetyltransferase activity","termid":"GO:0010484"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02773":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016746","GO:0140096","GO:0003824","GO:0016740","GO:0034212","GO:0003674"],"is_obsolete":false,"name":"histone H3K18 acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone H3-K18 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H3-K18 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H3-K18 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H3-K18 specific)","type":"exact"}],"termid":"GO:0043993","terms_by_termid":{"GO:0043993":null}}


id: GO:0002561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated exocytosis of secretory granules containing preformed mediators such as histamine, serotonin, and neutral proteases by a basophil.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte degranulation","termid":"GO:0043299"},{"relation_name":"part_of","term_name":"basophil activation involved in immune response","termid":"GO:0002276"},{"relation_name":"part_of","term_name":"basophil mediated immunity","termid":"GO:0002560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"basophil degranulation","termid":"GO:0002561"}


id: MONDO:0011342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"SLC35A1-CDG is an extremely rare form of CDG syndrome characterized clinically in the single reported case by repeated hemorrhagic incidents, including severe pulmonary hemorrhage.","definition_xrefs":["Orphanet:238459"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type II","termid":"MONDO:0005501"},{"relation_name":"is_a","term_name":"disorder of multiple glycosylation","termid":"MONDO:0017749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"SLC35A1-congenital disorder of glycosylation","secondary_identifiers":["SCTID:723624008","OMIM:603585","DOID:0070258","MEDGEN:370234","GARD:12409","MESH:C567040","UMLS:C1970344"],"synonyms":[{"name":"CDG IIf","type":"related"},{"name":"CDG syndrome type IIf","type":"exact"},{"name":"CDG-IIf","type":"exact"},{"name":"CDG2F","type":"exact"},{"name":"CMP-sialic acid transporter deficiency","type":"exact"},{"name":"SLC35A1-CDG","type":"exact"},{"name":"SLC35A1-CDG (CDG-IIf)","type":"related"},{"name":"SLC35A1-congenital disorder of glycosylation","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type IIf","type":"exact"},{"name":"congenital disorder of glycosylation type 2f","type":"exact"},{"name":"congenital disorder of glycosylation type IIf","type":"exact"},{"name":"congenital disorder of glycosylation, type IIf","type":"related"}],"termid":"MONDO:0011342","xrefs":{"Monarch":{"xref_id":"0011342"}}}


id: PBO:0056449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule affinity regulating kinase 3 pseudogene 1","termid":"PBO:0056449"}


id: PBO:0017799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0061 family mitochondrial protein (predicted)","termid":"PBO:0017799"}


id: PBO:0077057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombospondin type 1 domain containing 4","termid":"PBO:0077057"}


id: PBO:0055510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2944","termid":"PBO:0055510"}


id: MONDO:0003659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Hodgkin or non-Hodgkin lymphoma that occurs during childhood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"},{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"pediatric lymphoma","secondary_identifiers":["NANDO:2100004","UMLS:C1332979","NCIT:C5165","MEDGEN:232062","DOID:5823"],"synonyms":[{"name":"childhood lymphoma","type":"exact"},{"name":"lymphoma","type":"broad"},{"name":"pediatric lymphoma","type":"exact"}],"termid":"MONDO:0003659","xrefs":{"Monarch":{"xref_id":"0003659"}}}


id: PR:Q9USK0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ipk1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USK0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-pentakisphosphate 2-kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.10c","synonyms":[{"name":"Ins(1,3,4,5,6)P5 2-kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"InsP5 2-kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ipk1","type":"exact"},{"name":"inositol-1,3,4,5,6-pentakisphosphate 2-kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USK0"}


id: PBO:0084237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Imidazole glycerol phosphate synthase; glutamine amidotransferase:cyclase that catalyzes the fifth step of histidine biosynthesis and also produces 5-aminoimidazole-4-carboxamide ribotide (AICAR), a purine precursor","termid":"PBO:0084237"}


id: PBO:0049939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERV-H LTR-associating 3","termid":"PBO:0049939"}


id: MONDO:0010666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Miles-Carpenter syndrome (obsolete MONDO:0010666)","secondary_identifiers":["OMIM:309605"],"termid":"MONDO:0010666","xrefs":{"Monarch":{"xref_id":"0010666"}}}


id: GO:2000818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of myoblast proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of myoblast proliferation","termid":"GO:2000291"},{"relation_name":"negatively_regulates","term_name":"myoblast proliferation","termid":"GO:0051450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of myoblast proliferation","termid":"GO:2000818"}


id: GO:0035714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrogen dioxide (NO2) stimulus.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen dioxide","termid":"GO:0035713"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nitrogen dioxide","synonyms":[{"name":"cellular response to NO2","type":"exact"}],"termid":"GO:0035714"}


id: PBO:0003006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacid dehydrogenase (predicted)","termid":"PBO:0003006"}


id: GO:0072348
data:
  {"annotated_genes":["SJAG_05213","SJAG_02779","SJAG_03577","SJAG_01660","SJAG_03652","SJAG_03452","SJAG_01344","SJAG_01941","SJAG_02463","SJAG_01890","SJAG_00671","SJAG_01589","SJAG_02780","SJAG_04673","SJAG_00835","SJAG_00991","SJAG_03334","SJAG_03497","SJAG_04295","SJAG_02962","SJAG_04325"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035348"},{"annotations":[73529,80968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905135"},{"annotations":[64660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903712"},{"annotations":[97340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098709"},{"annotations":[114989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160007"},{"annotations":[120072,97888,98863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071996"},{"annotations":[103180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"},{"annotations":[103181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"},{"annotations":[72234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990559"},{"annotations":[104427,90081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990543"},{"annotations":[90229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990557"},{"annotations":[105456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990545"},{"annotations":[95143],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905626"},{"annotations":[67105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902434"},{"annotations":[62502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902358"},{"annotations":[102495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140125"},{"annotations":[91957,91958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071934"}]},"cv_name":"biological_process","definition":"The directed movement of compounds that contain sulfur, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00671":null,"SJAG_00835":null,"SJAG_00991":null,"SJAG_01344":null,"SJAG_01589":null,"SJAG_01660":null,"SJAG_01890":null,"SJAG_01941":null,"SJAG_02463":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_02962":null,"SJAG_03334":null,"SJAG_03452":null,"SJAG_03497":null,"SJAG_03577":null,"SJAG_03652":null,"SJAG_04295":null,"SJAG_04325":null,"SJAG_04673":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"sulfur compound transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"synonyms":[{"name":"sulfur-containing compound transport","type":"exact"}],"termid":"GO:0072348","terms_by_termid":{"GO:0035348":null,"GO:0071934":null,"GO:0071996":null,"GO:0098709":null,"GO:0140125":null,"GO:0160007":null,"GO:1902358":null,"GO:1902434":null,"GO:1903712":null,"GO:1905135":null,"GO:1905626":null,"GO:1990543":null,"GO:1990545":null,"GO:1990553":null,"GO:1990554":null,"GO:1990557":null,"GO:1990559":null}}


id: GO:0072501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of divalent inorganic anions at the level of a cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular divalent inorganic anion homeostasis (obsolete GO:0072501)","termid":"GO:0072501"}


id: MONDO:0020041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete 46,XY disorder of sex development due to a defect in testosterone metabolism by peripheral tissue (obsolete MONDO:0020041)","secondary_identifiers":["Orphanet:98086"],"termid":"MONDO:0020041","xrefs":{"Monarch":{"xref_id":"0020041"}}}


id: PBO:0064640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphopantothenoylcysteine decarboxylase","termid":"PBO:0064640"}


id: PBO:0077911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPT1 pseudogene 2","termid":"PBO:0077911"}


id: MONDO:0002772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the ventricles of the brain.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cerebral meningioma","termid":"MONDO:0003772"},{"relation_name":"is_a","term_name":"cerebral ventricle cancer","termid":"MONDO:0002682"},{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"},{"relation_name":"is_a","term_name":"malignant tumor of meninges","termid":"MONDO:0021322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"intraventricular meningioma","secondary_identifiers":["UMLS:C1334271","NCIT:C5273","DOID:3772","MEDGEN:232669"],"synonyms":[{"name":"brain ventricle meningioma (disease)","type":"exact"},{"name":"meningioma (disease) of brain ventricle","type":"exact"}],"termid":"MONDO:0002772","xrefs":{"Monarch":{"xref_id":"0002772"}}}


id: FYPO:0005003
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the composition of a protein complex differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein complex composition","synonyms":[{"name":"abnormal protein complex stoichiometry","type":"exact"},{"name":"abnormal protein-containing complex composition","type":"exact"}],"termid":"FYPO:0005003"}


id: MOD:01905
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to 5-hydroxy-3-methyl-L-proline.","definition_xrefs":["PubMed:7592021","PubMed:8557573","RESID:AA0473"],"direct_ancestors":[{"relation_name":"has_functional_parent","term_name":"monohydroxylated proline","termid":"MOD:01024"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxy-3-methyl-L-proline","synonyms":[{"name":"(2S,3S,5Xi)-5-hydroxy-3-methylpyrrolidine-2-carboxylic acid","type":"exact"},{"name":"5-hydroxy-3-methyl-L-proline","type":"exact"},{"name":"5-hydroxy-3-methylproline","type":"exact"},{"name":"5Hy3MePro","type":"exact"},{"name":"MOD_RES 5-hydroxy-3-methylproline (Ile)","type":"exact"},{"name":"beta-methyl-delta-hydroxyproline","type":"exact"}],"termid":"MOD:01905"}


id: GO:1903716
data:
  {"annotated_genes":["SJAG_00760","SJAG_03777"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098710"},{"annotations":[117009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140140"}]},"cv_name":"biological_process","definition":"The process in which guanine is transported across a membrane.","definition_xrefs":["GOC:TermGenie","PMID:14998997","GO_REF:0000069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanine transport","termid":"GO:0015854"},{"relation_name":"is_a","term_name":"purine nucleobase transmembrane transport","termid":"GO:1904823"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00760":null,"SJAG_03777":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"guanine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903716","terms_by_termid":{"GO:0098710":null,"GO:0140140":null}}


id: GO:0016636
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces an iron-sulfur protein.","definition_xrefs":["EC:1.3.7.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor","synonyms":[{"name":"oxidoreductase activity, acting on the CH-CH group of donors, iron-sulphur protein as acceptor","type":"exact"}],"termid":"GO:0016636"}


id: MONDO:0007457
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diastema, dental medial","secondary_identifiers":["OMIM:125900","MEDGEN:342157","UMLS:C1852086","MESH:C565098"],"synonyms":[{"name":"diastema, dental medial","type":"exact"}],"termid":"MONDO:0007457","xrefs":{"Monarch":{"xref_id":"0007457"}}}


id: PBO:0086979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of the type I protein phosphatase (PP1) Glc7p; Glc7p participates in the regulation of a variety of metabolic processes including mitosis and glycogen metabolism; in vitro evidence suggests Ypi1p is an inhibitor of Glc7p while in vivo evidence suggests it is an activator; overproduction causes decreased cellular content of glycogen; partial depletion causes lithium sensitivity, while overproduction confers lithium-tolerance","termid":"PBO:0086979"}


id: PBO:0113162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inefficient homocysteine synthase; catalyzes de novo homocysteine biosynthesis; capable of catalyzing same reaction as Met17p; affects S-methylmethionine metabolism; similar to Str2p, which is a cystathionine gamma-synthase important in sulfur metabolism; HSU1 is not an essential gene","termid":"PBO:0113162"}


id: PBO:0081279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF45 antisense RNA 1","termid":"PBO:0081279"}


id: GO:0120269
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A rod-shaped protein complex containing Centrin4 protein that flanks the flagellum attachment zone (FAZ) filament and the quartet microtubules.","definition_xrefs":["GOC:ach","PMID:26540076","GOC:krc","PMID:31217284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"part_of","term_name":"ciliary pocket","termid":"GO:0020016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ciliary centrin arm","termid":"GO:0120269"}


id: PBO:0004929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-coenzyme A binding protein (predicted)","termid":"PBO:0004929"}


id: GO:0042933
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of the siderophore chrysobactin (alpha-N-(2,3-dihydroxybenzoyl)-D-lysyl-L-serine) from one side of a membrane to the other.","definition_xrefs":["PMID:8837459","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"siderophore-iron transmembrane transporter activity","termid":"GO:0015343"},{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"},{"relation_name":"is_a","term_name":"dipeptide transmembrane transporter activity","termid":"GO:0071916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"chrysobactin transmembrane transporter activity","synonyms":[{"name":"chrysobactin transporter activity","type":"related"}],"termid":"GO:0042933"}


id: MONDO:1012513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"verrucous epidermal keratinocytic nevi, non-human animal","termid":"MONDO:1011762"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"verrucous epidermal keratinocytic nevi, dog","secondary_identifiers":["OMIA:002117-9615"],"termid":"MONDO:1012513","xrefs":{"Monarch":{"xref_id":"1012513"}}}


id: GO:0039667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The uptake of a virus or viral genetic material into a host cell which occurs through retraction of a virion-bound pilus.","definition_xrefs":["GOC:bf","VZ:981","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete viral entry into host cell via pilus retraction (obsolete GO:0039667)","termid":"GO:0039667"}


id: MONDO:0002991
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma arising from the ovary. It is characterized by the presence of malignant epithelial cells in a fibrotic stroma. Histologic variants include clear cell, serous, mucinous, and endometrioid adenocarcinofibroma.","definition_xrefs":["NCIT:C40035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive organ cancer","termid":"MONDO:0001416"},{"relation_name":"is_a","term_name":"malignant mixed neoplasm","termid":"MONDO:0005853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adenocarcinofibroma","secondary_identifiers":["DOID:4422","UMLS:C1510778","MEDGEN:266966"],"synonyms":[{"name":"adenocarcinofibroma","type":"exact"},{"name":"adenofibroma, malignant","type":"exact"},{"name":"malignant adenofibroma","type":"exact"}],"termid":"MONDO:0002991","xrefs":{"Monarch":{"xref_id":"0002991"}}}


id: MONDO:0007396
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Stanescu type dysostosis is a rare form of osteosclerosis.","definition_xrefs":["Orphanet:1798"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"osteosclerosis","termid":"MONDO:0002933"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysostosis, Stanescu type","secondary_identifiers":["OMIM:122900","GARD:2016","MESH:C562974","SCTID:254124008","MEDGEN:140931","UMLS:C0432263"],"synonyms":[{"name":"Stanescu osteosclerosis","type":"exact"},{"name":"autosomal dominant osteosclerosis, Stanescu type","type":"exact"},{"name":"craniofacial dysostosis with diaphyseal hyperplasia","type":"related"},{"name":"craniofacial dysostosis-diaphyseal hyperplasia syndrome","type":"exact"},{"name":"dysostosis Stanescu type","type":"related"},{"name":"osteosclerosis, Stanescu type","type":"related"}],"termid":"MONDO:0007396","xrefs":{"Monarch":{"xref_id":"0007396"}}}


id: PBO:0039655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP1S2 pseudogene 1","termid":"PBO:0039655"}


id: GO:1903090
data:
  {"annotated_genes":["SJAG_02962","SJAG_03652","SJAG_03808","SJAG_02152"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91951,91952,119331,120629],"is_not":false,"summary":null,"term":"GO:1903090"}]},"cv_name":"biological_process","definition":"The process in which pyridoxal is transported across a membrane.","definition_xrefs":["PMID:15701794","GO_REF:0000069","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridoxal transport","termid":"GO:0031920"},{"relation_name":"is_a","term_name":"vitamin transmembrane transport","termid":"GO:0035461"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02152":null,"SJAG_02962":null,"SJAG_03652":null,"SJAG_03808":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"pyridoxal transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903090","terms_by_termid":{"GO:1903090":null}}


id: PBO:0074923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 91B","termid":"PBO:0074923"}


id: GO:0002873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of natural killer cell tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tolerance induction","termid":"GO:0002645"},{"relation_name":"is_a","term_name":"regulation of acute inflammatory response","termid":"GO:0002673"},{"relation_name":"is_a","term_name":"regulation of natural killer cell tolerance induction","termid":"GO:0002871"},{"relation_name":"positively_regulates","term_name":"natural killer cell tolerance induction","termid":"GO:0002519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of natural killer cell tolerance induction","synonyms":[{"name":"activation of natural killer cell tolerance induction","type":"narrow"},{"name":"positive regulation of NK cell tolerance induction","type":"exact"},{"name":"stimulation of natural killer cell tolerance induction","type":"narrow"},{"name":"up regulation of natural killer cell tolerance induction","type":"exact"},{"name":"up-regulation of natural killer cell tolerance induction","type":"exact"},{"name":"upregulation of natural killer cell tolerance induction","type":"exact"}],"termid":"GO:0002873"}


id: GO:0015323
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete type V protein secretor activity (obsolete GO:0015323)","synonyms":[{"name":"type V protein secretor activity","type":"exact"}],"termid":"GO:0015323"}


id: GO:0023068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is conveyed via the phloem.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transmission via phloem (obsolete GO:0023068)","synonyms":[{"name":"signal transmission via phloem","type":"exact"}],"termid":"GO:0023068"}


id: FYPO:0002366
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 4 of histone H3 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone methylation during vegetative growth","termid":"FYPO:0000870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0005447","FYPO:0002494","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased histone H3-K4 methylation during vegetative growth","synonyms":[{"name":"decreased histone H3 K4 methylation during vegetative growth","type":"exact"},{"name":"decreased histone H3-K4 methylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K4me during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K4 methylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K4 methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002366"}


id: GO:0002878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of an acute inflammatory response to a non-antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of acute inflammatory response","termid":"GO:0002674"},{"relation_name":"is_a","term_name":"regulation of acute inflammatory response to non-antigenic stimulus","termid":"GO:0002877"},{"relation_name":"negatively_regulates","term_name":"acute inflammatory response to non-antigenic stimulus","termid":"GO:0002525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of acute inflammatory response to non-antigenic stimulus","synonyms":[{"name":"down regulation of acute inflammatory response to non-antigenic stimulus","type":"exact"},{"name":"down-regulation of acute inflammatory response to non-antigenic stimulus","type":"exact"},{"name":"downregulation of acute inflammatory response to non-antigenic stimulus","type":"exact"},{"name":"inhibition of acute inflammatory response to non-antigenic stimulus","type":"narrow"}],"termid":"GO:0002878"}


id: PBO:0052408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, two Ig domains and short cytoplasmic tail 2","termid":"PBO:0052408"}


id: PBO:0004276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport protein Tvp23 (predicted)","termid":"PBO:0004276"}


id: PBO:0081820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 737","termid":"PBO:0081820"}


id: PBO:0116220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-oxoprolinase (ATP-hydrolyzing), Oxp2","termid":"PBO:0116220"}


id: PR:000044703
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.3, initiator methionine removed K9-methylated form (Schizosaccharomyces pombe) whose methylation type is monomethylation. Example: UniProtKB:P10651-1, 2-136, Lys-10, MOD:00085.","definition_xrefs":["PRO:DAN","PMID:23849629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hht3/Me(K9)","termid":"PR:000027604"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3, initiator methionine removed K9-monomethylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"Spom-hht3/InitMet-/K9me1","type":"exact"}],"termid":"PR:000044703"}


id: GO:0018118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-cysteine by covalent addition of glutathione to form peptidyl-L-cysteine glutathione disulfide.","definition_xrefs":["RESID:AA0229"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-cysteine glutathione disulfide biosynthetic process from peptidyl-cysteine (obsolete GO:0018118)","synonyms":[{"name":"peptidyl-L-cysteine glutathione disulfide anabolism from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-L-cysteine glutathione disulfide formation from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-L-cysteine glutathione disulfide synthesis from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-L-cysteine glutathione disulphide biosynthesis from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-L-cysteine glutathione disulphide biosynthetic process from peptidyl-cysteine","type":"exact"}],"termid":"GO:0018118"}


id: MONDO:0850495
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute myeloid leukemia typically showing megakaryocytic maturation and associated with t(1;22)(p13;q13), resulting in the expression of RBM15-MKL1 fusion protein.","definition_xrefs":["DOID:0081096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"acute myeloid leukemia, t(1;22)(p13;q13)","termid":"MONDO:0850495","xrefs":{"Monarch":{"xref_id":"0850495"}}}


id: PBO:0055771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ligand of numb-protein X 1","termid":"PBO:0055771"}


id: PBO:0058845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8074","termid":"PBO:0058845"}


id: MOD:02022
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-cervonoyl-L-lysine.","direct_ancestors":[{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"N-cervonoylated residue","termid":"MOD:02023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"},{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01875","MOD:01155"],"is_obsolete":false,"name":"N6-cervonoyl-L-lysine","termid":"MOD:02022"}


id: MONDO:0003158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infiltrating malignant tumor characterized by the presence of atypical cells with myoepithelial differentiation. Representative examples include malignant breast myoepithelioma and salivary gland myoepithelial carcinoma.","definition_xrefs":["NCIT:C7596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoepithelial tumor","termid":"MONDO:0002380"},{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant myoepithelioma","secondary_identifiers":["DOID:4838","UMLS:C0334699","ONCOTREE:STMYEC","ICDO:8982/3","MEDGEN:90822"],"synonyms":[{"name":"malignant myoepithelioma","type":"exact"},{"name":"myoepithelial carcinoma","type":"exact"},{"name":"myoepithelioma carcinoma","type":"related"},{"name":"myoepithelioma, malignant","type":"exact"},{"name":"soft tissue myoepithelial carcinoma","type":"related"}],"termid":"MONDO:0003158","xrefs":{"Monarch":{"xref_id":"0003158"}}}


id: PBO:0082521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc42p-activated signal transducing kinase; member of the PAK (p21-activated kinase) family, along with Ste20p and Skm1p; involved in septin ring assembly, vacuole inheritance, cytokinesis, sterol uptake regulation; phosphorylates Cdc3p and Cdc10p; CLA4 has a paralog, SKM1, that arose from the whole genome duplication","termid":"PBO:0082521"}


id: PBO:0063898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class U pseudogene 1","termid":"PBO:0063898"}


id: PATO:0002294
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A texture that is uniformly covered in short, oblong, or trench-like depressions.","definition_xrefs":["Book:Book"],"direct_ancestors":[{"relation_name":"is_a","term_name":"texture","termid":"PATO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scrobiculate","termid":"PATO:0002294"}


id: PATO:0001544
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's ability of being turned, bowed, or twisted without breaking.","definition_xrefs":["merriam-webster:merriam-webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flexibility","termid":"PATO:0001543"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flexible","synonyms":[{"name":"bendy","type":"exact"}],"termid":"PATO:0001544"}


id: MONDO:0023483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious process affecting the skeletal muscles. It can be caused by viruses (including HIV), bacteria, fungi, and parasites. Symptoms include muscle weakness and muscle pain.","definition_xrefs":["NCIT:C26984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"},{"relation_name":"is_a","term_name":"myositis disease","termid":"MONDO:0021167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"infectious myositis","secondary_identifiers":["SCTID:29689003","GARD:9131","ICD9:728.0","UMLS:C0158353","ICD10CM:M60.0","icd11.foundation:82568660","MEDGEN:102358"],"synonyms":[{"name":"infectious myositis","type":"exact"},{"name":"infective myositis","type":"exact"}],"termid":"MONDO:0023483","xrefs":{"Monarch":{"xref_id":"0023483"}}}


id: MONDO:0013618
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniofacial anomalies and anterior segment dysgenesis syndrome","secondary_identifiers":["MEDGEN:481729","OMIM:614195","UMLS:C3280099"],"synonyms":[{"name":"CAASDS","type":"related"},{"name":"craniofacial anomalies and anterior segment dysgenesis syndrome","type":"exact"}],"termid":"MONDO:0013618","xrefs":{"Monarch":{"xref_id":"0013618"}}}


id: PBO:0046950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 74 member A4","termid":"PBO:0046950"}


id: MONDO:0012575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any branchio-oto-renal syndrome in which the cause of the disease is a mutation in the SIX5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branchio-oto-renal syndrome","termid":"MONDO:0007029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"branchiootorenal syndrome 2","secondary_identifiers":["OMIM:610896","UMLS:C1970479","GARD:15503","DOID:0111424","MEDGEN:410081"],"synonyms":[{"name":"BOR2","type":"related"},{"name":"SIX5 branchio-oto-renal syndrome","type":"exact"},{"name":"branchio-oto-renal syndrome caused by mutation in SIX5","type":"exact"},{"name":"branchiootorenal syndrome 2","type":"exact"},{"name":"branchiootorenal syndrome type 2","type":"exact"}],"termid":"MONDO:0012575","xrefs":{"Monarch":{"xref_id":"0012575"}}}


id: MONDO:0036915
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing neoplasm that arises from the ovary and is characterized by the presence of neoplastic epithelium that resembles the epithelium of the endocervix or gastrointestinal tract. It includes mucinous adenofibroma, mucinous cystadenofibroma, and mucinous cystadenoma.","definition_xrefs":["NCIT:C40039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian benign neoplasm","termid":"MONDO:0000646"},{"relation_name":"is_a","term_name":"ovarian mucinous neoplasm","termid":"MONDO:0003756"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign ovarian mucinous tumor","secondary_identifiers":["UMLS:C1511100","MEDGEN:267038"],"synonyms":[{"name":"benign ovarian mucinous neoplasm","type":"exact"},{"name":"benign ovarian mucinous tumor","type":"exact"},{"name":"ovarian mucinous neoplasm, benign","type":"exact"}],"termid":"MONDO:0036915","xrefs":{"Monarch":{"xref_id":"0036915"}}}


id: MONDO:0859274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with intention tremor, pyramidal signs, dyspraxia, and ocular anomalies","secondary_identifiers":["OMIM:619995","MEDGEN:1823969","UMLS:C5774196"],"termid":"MONDO:0859274","xrefs":{"Monarch":{"xref_id":"0859274"}}}


id: PBO:0027779
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_cytokinesis","termid":"PBO:0027779"}


id: GO:0047370
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-citramalate + succinyl-CoA = citramalyl-CoA + succinate.","definition_xrefs":["RHEA:38287","PMID:16547052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016782","GO:0003824"],"is_obsolete":false,"name":"succinate-citramalate CoA-transferase activity","secondary_identifiers":["MetaCyc:2.8.3.7-RXN"],"synonyms":[{"name":"citramalate coenzyme A-transferase activity","type":"exact"},{"name":"itaconate CoA-transferase activity","type":"exact"},{"name":"succinyl coenzyme A-citramalyl coenzyme A transferase activity","type":"exact"},{"name":"succinyl-CoA:citramalate CoA-transferase activity","type":"exact"}],"termid":"GO:0047370"}


id: PBO:0053294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM zinc finger domain containing 1","termid":"PBO:0053294"}


id: PBO:0077866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin 3 pseudogene 7","termid":"PBO:0077866"}


id: MONDO:0030890
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia","termid":"MONDO:0020135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"pontocerebellar hypoplasia, IIA 17","secondary_identifiers":["MEDGEN:1809583","UMLS:C5676999","OMIM:619909"],"synonyms":[{"name":"PCH17","type":"exact"},{"name":"pontocerebellar hypoplasia, IIA 17","type":"exact"}],"termid":"MONDO:0030890","xrefs":{"Monarch":{"xref_id":"0030890"}}}


id: GO:0006359
data:
  {"annotated_genes":["SJAG_03931","SJAG_00142","SJAG_02898"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77765,79857],"is_not":false,"summary":null,"term":"GO:0006359"},{"annotations":[75528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016480"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transcription mediated by RNA ploymerase III.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"regulates","term_name":"transcription by RNA polymerase III","termid":"GO:0006383"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_02898":null,"SJAG_03931":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0008150","GO:0006355"],"is_obsolete":false,"name":"regulation of transcription by RNA polymerase III","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"regulation of transcription from Pol III promoter","type":"exact"},{"name":"regulation of transcription from RNA polymerase III promoter","type":"exact"}],"termid":"GO:0006359","terms_by_termid":{"GO:0006359":null,"GO:0016480":null}}


id: GO:0005805
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete ER-Golgi transport vesicle (obsolete GO:0005805)","synonyms":[{"name":"ER-Golgi transport vesicle","type":"exact"}],"termid":"GO:0005805"}


id: PBO:0088603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-semialdehyde dehydrogenase","termid":"PBO:0088603"}


id: PBO:0048588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltransferase light chain 2","termid":"PBO:0048588"}


id: PBO:0038376
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-root_parasite_of","termid":"PBO:0038376"}


id: PBO:0084022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycosylphosphatidylinositol (GPI)-anchored cell wall endoglucanase; localizes in birth scars; required for proper cell separation after cytokinesis; expression is activated by Swi5p and tightly regulated in a cell cycle-dependent manner","termid":"PBO:0084022"}


id: PBO:0001643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroid dehydrogenase (predicted)","termid":"PBO:0001643"}


id: GO:0075323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of oomycete sporangium development, a process that leads to the formation of oomycete sporangium, a single-celled or many-celled structure that germinates directly to form an infection hypha or differentiate, through specialized cleavage vesicles, into between 10 and 30 zoospores, which is laterally flagellated.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sporulation","termid":"GO:0043938"},{"relation_name":"is_a","term_name":"positive regulation of sporangium development","termid":"GO:0075311"},{"relation_name":"is_a","term_name":"regulation of oomycete sporangium development","termid":"GO:0075322"},{"relation_name":"is_a","term_name":"positive regulation of asexual reproduction","termid":"GO:1903666"},{"relation_name":"positively_regulates","term_name":"oomycete sporangium development","termid":"GO:0075321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of oomycete sporangium development","termid":"GO:0075323"}


id: SO:0001319
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Galactosyl_queuosine is a modified 7-deazoguanosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"seven_deazaguanosine","termid":"SO:0001316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosyl_queuosine","secondary_identifiers":["RNAMOD:045"],"synonyms":[{"name":"galQ","type":"exact"},{"name":"galactosyl queuosine","type":"exact"},{"name":"galactosyl-queuosine","type":"exact"}],"termid":"SO:0001319"}


id: PBO:0033819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Srp2","termid":"PBO:0033819"}


id: GO:0072687
data:
  {"annotated_genes":["SJAG_04140","SJAG_03926","SJAG_00930","SJAG_03915","SJAG_04412","SJAG_00460","SJAG_03681","SJAG_04623","SJAG_03540","SJAG_01546","SJAG_02241","SJAG_01613","SJAG_05196","SJAG_03073","SJAG_01805","SJAG_03989","SJAG_01837","SJAG_01464","SJAG_02368","SJAG_02286","SJAG_03048","SJAG_02320","SJAG_04745"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91171,104167,105095,109652,113038,115078,117756,120530],"is_not":false,"summary":null,"term":"GO:0072687"},{"annotations":[89566],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990574"},{"annotations":[118523,120566,103245,105356],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990385"},{"annotations":[96580,101719,98574,101021,95599,104630,93098,95672,108927,120712],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090619"}]},"cv_name":"cellular_component","definition":"A spindle that forms as part of meiosis. Several proteins, such as budding yeast Spo21p, fission yeast Spo2 and Spo13, and C. elegans mei-1, localize specifically to the meiotic spindle and are absent from the mitotic spindle.","definition_xrefs":["GOC:vw","PMID:11408572","PMID:8027178","PMID:18367542","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle","termid":"GO:0005819"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00460":null,"SJAG_00930":null,"SJAG_01464":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02241":null,"SJAG_02286":null,"SJAG_02320":null,"SJAG_02368":null,"SJAG_03048":null,"SJAG_03073":null,"SJAG_03540":null,"SJAG_03681":null,"SJAG_03915":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04140":null,"SJAG_04412":null,"SJAG_04623":null,"SJAG_04745":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"meiotic spindle","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0072687","terms_by_termid":{"GO:0072687":null,"GO:0090619":null,"GO:1990385":null,"GO:1990574":null}}


id: SO:0001683
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence motif is a nucleotide or amino-acid sequence pattern that may have biological significance.","direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence_motif","secondary_identifiers":["http://en.wikipedia.org/wiki/Sequence_motif"],"synonyms":[{"name":"sequence motif","type":"related"}],"termid":"SO:0001683"}


id: GO:0060490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a branch forms along the side of the lung epithelial tube.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral sprouting from an epithelium","termid":"GO:0060601"},{"relation_name":"part_of","term_name":"epithelial tube branching involved in lung morphogenesis","termid":"GO:0060441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral sprouting involved in lung morphogenesis","termid":"GO:0060490"}


id: MONDO:0011594
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian dysgenesis, hypergonadotropic, with short stature and recurrent metabolic acidosis","secondary_identifiers":["UMLS:C3148970","MEDGEN:460321","OMIM:605756"],"synonyms":[{"name":"gonadal dysgenesis, hypergonadotropic, 20 type, with short stature and recurrent metabolic acidosis","type":"related"},{"name":"ovarian dysgenesis, hypergonadotropic, with short stature and recurrent metabolic acidosis","type":"exact"}],"termid":"MONDO:0011594","xrefs":{"Monarch":{"xref_id":"0011594"}}}


id: PBO:0091136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial complex assembly factor, LYR family Fmc1","termid":"PBO:0091136"}


id: PBO:0117182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENND1A antisense RNA 1","termid":"PBO:0117182"}


id: PBO:0046115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E binding protein 1 pseudogene 2","termid":"PBO:0046115"}


id: PBO:0051704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate-5-phosphatase D","termid":"PBO:0051704"}


id: PR:O42706
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl2102 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L21-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC959.08","synonyms":[{"name":"Spom972h-rpl2102","type":"exact"}],"termid":"PR:O42706"}


id: PBO:0089913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPS/CORVET complex subunit, ubiquitin-protein ligase E3 Pep3/Vps18","termid":"PBO:0089913"}


id: PBO:0048087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 8","termid":"PBO:0048087"}


id: MONDO:0022865
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corneal dystrophy ichthyosis microcephaly intellectual disability","termid":"MONDO:0022865","xrefs":{"Monarch":{"xref_id":"0022865"}}}


id: PBO:0030740
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-pear-shaped_cell_during_nitrogen_starvation","termid":"PBO:0030740"}


id: PBO:0084632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methyltransferase involved in methylation of histone H4 Lys5, -8, -12; S-adenosylmethionine-dependent; zinc-finger protein, contains one canonical and two unusual fingers in unusual arrangements; deletion enhances replication of positive-strand RNA virus","termid":"PBO:0084632"}


id: PBO:0081678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 599","termid":"PBO:0081678"}


id: GO:0018059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The oxidative deamination of N-terminal peptidyl-serine to form pyruvic acid with an amide bond between its 1-carboxyl group and the N-terminal residue.","definition_xrefs":["RESID:AA0127"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-serine deamination (obsolete GO:0018059)","termid":"GO:0018059"}


id: PBO:0034690
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_vacuole","termid":"PBO:0034690"}


id: PBO:0051351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2/OR2-1 (pseudogene)","termid":"PBO:0051351"}


id: PBO:0034025
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_approver_email","termid":"PBO:0034025"}


id: PBO:0088814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GEF","termid":"PBO:0088814"}


id: PBO:0038615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiotensin I converting enzyme","termid":"PBO:0038615"}


id: SO:0001078
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of peptide with secondary structure has hydrogen bonding along the peptide chain that causes a defined conformation of the chain.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_structural_region","termid":"SO:0001070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_secondary_structure","secondary_identifiers":["BS:00003","http://en.wikipedia.org/wiki/Secondary_structure"],"synonyms":[{"name":"2nary structure","type":"related"},{"name":"polypeptide secondary structure","type":"exact"},{"name":"secondary structure","type":"related"},{"name":"secondary structure region","type":"related"},{"name":"secondary_structure","type":"related"}],"termid":"SO:0001078"}


id: PBO:0041785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcyphosine like","termid":"PBO:0041785"}


id: GO:0047275
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: N-acetyl-D-glucosaminyl-(1,3)-D-galactosyl-(1,4)-D-glucosylceramide + UDP-galactose = D-galactosyl-N-acetyl-D-glucosaminyl-(1,3)-D-galactosyl-(1,4)-D-glucosylceramide + UDP.","definition_xrefs":["GOC:rynl"],"gene_count":0,"genotype_count":0,"name":"obsolete glucosaminylgalactosylglucosylceramide beta-galactosyltransferase activity (obsolete GO:0047275)","termid":"GO:0047275"}


id: MONDO:0008927
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic eye disease characterized by optic disk anomalies (bilateral colobomatous optic disks, retinal vessels arising from the peripheral optic disk) and macular atrophy. Peripapillary chorioretinal atrophy and chorioretinal and iris coloboma have also been described. Patients present with horizontal nystagmus and poor visual acuity.","definition_xrefs":["Orphanet:435930"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"disorder of visual system","termid":"MONDO:0024458"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colobomatous optic disc-macular atrophy-chorioretinopathy syndrome","secondary_identifiers":["UMLS:C4225424","GARD:17719","DOID:0080635","MEDGEN:894574","OMIM:212550","MESH:C565876"],"synonyms":[{"name":"ODRMD","type":"related"},{"name":"optic DISC anomalies with retinal and/or macular dystrophy","type":"related"}],"termid":"MONDO:0008927","xrefs":{"Monarch":{"xref_id":"0008927"}}}


id: PBO:0076725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCL1 family AKT coactivator A","termid":"PBO:0076725"}


id: PBO:0062143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 13 pseudogene","termid":"PBO:0062143"}


id: MONDO:0020049
data:
  {"annotated_genes":["SJAG_01806","SJAG_03424","SJAG_00112","SJAG_01548","SJAG_01286","SJAG_02231"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88580],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011402"},{"annotations":[87503,87504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007925"},{"annotations":[87336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012574"},{"annotations":[87411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014848"},{"annotations":[87388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008684"}]},"cv_name":"mondo","definition":"Chromosomal disorder in which the chromosomal anomaly involves an autosome.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal disorder","termid":"MONDO:0019040"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00112":null,"SJAG_01286":null,"SJAG_01548":null,"SJAG_01806":null,"SJAG_02231":null,"SJAG_03424":null},"genotype_count":0,"is_obsolete":false,"name":"autosomal anomaly","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5681496","Orphanet:98127","MEDGEN:1843454","GARD:19417"],"synonyms":[{"name":"autosome chromosomal anomaly","type":"exact"},{"name":"chromosomal anomaly of autosome","type":"exact"}],"termid":"MONDO:0020049","terms_by_termid":{"MONDO:0007925":null,"MONDO:0008684":null,"MONDO:0011402":null,"MONDO:0012574":null,"MONDO:0014848":null},"xrefs":{"Monarch":{"xref_id":"0020049"}}}


id: PBO:0061185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (TTG) 15-1","termid":"PBO:0061185"}


id: PBO:0087793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO-ligase and SUMO-targeted metalloprotease; involved in DNA repair; removes DNA-protein crosslinks at stalled replication forks during replication of damaged DNA; clears chromatin-bound sumoylated proteins; localizes to single spot on nuclear periphery of mother cells but not daughters; exhibits vacuolar localization upon genotoxic stress; activated by DNA binding; member of minigluzincins protease family with mammalian DVC1/Spartan","termid":"PBO:0087793"}


id: GO:0048050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring after embryonic development, by which the anatomical structures of the eye are generated and organized. The eye is the organ of sight.","definition_xrefs":["GOC:jid","GOC:sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye morphogenesis","termid":"GO:0048592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic eye morphogenesis","secondary_identifiers":["GO:0048051"],"termid":"GO:0048050"}


id: MONDO:0012230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 10","secondary_identifiers":["UMLS:C1836503","OMIM:609259","MEDGEN:373104","MESH:C563758"],"synonyms":[{"name":"MYP10","type":"exact"},{"name":"myopia 10","type":"exact"}],"termid":"MONDO:0012230","xrefs":{"Monarch":{"xref_id":"0012230"}}}


id: GO:0042161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a lipoprotein by oxidation of one or more amino acids or the lipid group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein modification","termid":"GO:0042160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipoprotein oxidation","termid":"GO:0042161"}


id: GO:0180056
data:
  {"annotated_genes":["SJAG_00275"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114123],"is_not":false,"summary":null,"term":"GO:0180056"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: citrate(out) + 2-oxogluarate(in) = citrate(in) + 2-oxogluarat(out).","definition_xrefs":["PMID:20371607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-ketoglutarate transmembrane transporter activity","termid":"GO:0015139"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"citrate secondary active transmembrane transporter activity","termid":"GO:0071913"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00275":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"citrate:2-oxoglutarate antiporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180056","terms_by_termid":{"GO:0180056":null}}


id: PBO:0034172
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_fasciculating_neuron_projection","termid":"PBO:0034172"}


id: PBO:0074520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A12","termid":"PBO:0074520"}


id: PBO:0067044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 63, pseudogene","termid":"PBO:0067044"}


id: GO:0010481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process resulting in the physical partitioning and separation of an epidermal cell, any of the cells making up the epidermis, into daughter cells.","definition_xrefs":["PMID:17450124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epidermal cell division","synonyms":[{"name":"hypodermal cell division","type":"related"}],"termid":"GO:0010481"}


id: MONDO:0859592
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An anaplastic oligodendroglioma that has material basis in IDH gene family mutation and combined whole-arm losses of 1p and 19q (1p/19q codeletion).","definition_xrefs":["DOID:0080882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaplastic oligodendroglioma","termid":"MONDO:0016696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"IDH-mutant and 1p/19q-codeleted oligodendroglioma","secondary_identifiers":["MEDGEN:926090","NCIT:C129318","UMLS:C4288558"],"termid":"MONDO:0859592","xrefs":{"Monarch":{"xref_id":"0859592"}}}


id: PBO:0011958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial_amino_acid_deletion","termid":"PBO:0011958"}


id: PBO:0066244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif single stranded interacting protein 1 pseudogene 1","termid":"PBO:0066244"}


id: GO:0005364
data:
  {"annotated_genes":["SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97583],"is_not":false,"summary":null,"term":"GO:0005364"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: maltose(out) + H+(out) = maltose(in) + H+(in).","definition_xrefs":["TC:2.A.1.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate:proton symporter activity","termid":"GO:0005351"},{"relation_name":"is_a","term_name":"maltose transmembrane transporter activity","termid":"GO:0005363"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"maltose:proton symporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"hydrogen/maltose transporter activity","type":"broad"},{"name":"maltose permease","type":"broad"},{"name":"maltose:hydrogen symporter activity","type":"exact"}],"termid":"GO:0005364","terms_by_termid":{"GO:0005364":null}}


id: PBO:0003113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2/M transition checkpoint protein Sum2","termid":"PBO:0003113"}


id: MONDO:0015633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Bazex syndrome (obsolete MONDO:0015633)","termid":"MONDO:0015633","xrefs":{"Monarch":{"xref_id":"0015633"}}}


id: PBO:0069304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 560, pseudogene","termid":"PBO:0069304"}


id: PBO:0087350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spindle pole body (SPB) component; required for the insertion of the duplication plaque into the nuclear membrane during SPB duplication; essential for bipolar spindle formation; component of the Mps2p-Bbp1p complex; NBP1 has a paralog, YPR174C, that arose from the whole genome duplication","termid":"PBO:0087350"}


id: MONDO:0016183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete qualitative or quantitative defects of protein glycosyltransferase-like (obsolete MONDO:0016183)","secondary_identifiers":["Orphanet:209027"],"termid":"MONDO:0016183","xrefs":{"Monarch":{"xref_id":"0016183"}}}


id: GO:0022038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the corpus callosum over time, from its formation to the mature structure. The corpus callosum is a thick bundle of nerve fibers comprising a commissural plate connecting the two cerebral hemispheres. It consists of contralateral axon projections that provide communication between the right and left cerebral hemispheres.","definition_xrefs":["GOC:cls","GOC:jid","GO_REF:0000021","GOC:curators","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"telencephalon development","termid":"GO:0021537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corpus callosum development","termid":"GO:0022038"}


id: GO:1901399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of transforming growth factor beta3 activation.","definition_xrefs":["GOC:TermGenie","GOC:sl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transforming growth factor beta3 activation (obsolete GO:1901399)","synonyms":[{"name":"down regulation of TGF-beta 3 activation","type":"exact"},{"name":"down regulation of TGFB3 activation","type":"exact"},{"name":"down regulation of TGFbeta 3 activation","type":"exact"},{"name":"down regulation of transforming growth factor beta3 activation","type":"exact"},{"name":"down-regulation of TGF-beta 3 activation","type":"exact"},{"name":"down-regulation of TGFB3 activation","type":"exact"},{"name":"down-regulation of TGFbeta 3 activation","type":"exact"},{"name":"down-regulation of transforming growth factor beta3 activation","type":"exact"},{"name":"downregulation of TGF-beta 3 activation","type":"exact"},{"name":"downregulation of TGFB3 activation","type":"exact"},{"name":"downregulation of TGFbeta 3 activation","type":"exact"},{"name":"downregulation of transforming growth factor beta3 activation","type":"exact"},{"name":"inhibition of TGF-beta 3 activation","type":"exact"},{"name":"inhibition of TGFB3 activation","type":"exact"},{"name":"inhibition of TGFbeta 3 activation","type":"exact"},{"name":"inhibition of transforming growth factor beta3 activation","type":"narrow"},{"name":"negative regulation of TGF-beta 3 activation","type":"exact"},{"name":"negative regulation of TGFB3 activation","type":"exact"},{"name":"negative regulation of TGFbeta 3 activation","type":"exact"}],"termid":"GO:1901399"}


id: MONDO:1011120
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Orchitis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orchitis, non-human animal","termid":"MONDO:1010277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orchitis, dog","secondary_identifiers":["OMIA:000745-9615"],"termid":"MONDO:1011120","xrefs":{"Monarch":{"xref_id":"1011120"}}}


id: MONDO:0003470
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ependymoma which shows conspicuous cellularity without a significant increase in mitotic rate. (Adapted from WHO)","definition_xrefs":["NCIT:C4713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ependymoma","termid":"MONDO:0016698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular ependymoma","secondary_identifiers":["NCIT:C4714","MEDGEN:235137","DOID:5500","UMLS:C1384403"],"termid":"MONDO:0003470","xrefs":{"Monarch":{"xref_id":"0003470"}}}


id: GO:0050262
data:
  {"annotated_genes":["SJAG_04693"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114948],"is_not":false,"summary":null,"term":"GO:0050262"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-nicotinamide D-riboside + ATP = beta-nicotinamide D-ribonucleotide + ADP + H+.","definition_xrefs":["RHEA:14017","PMID:17914902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"ribosylnicotinamide kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8869633","KEGG_REACTION:R02324","EC:2.7.1.22","GO:0000816","MetaCyc:RIBOSYLNICOTINAMIDE-KINASE-RXN","Reactome:R-HSA-8869627"],"synonyms":[{"name":"ATP:N-ribosylnicotinamide 5'-phosphotransferase activity","type":"related"},{"name":"nicotinamide riboside kinase activity","type":"exact"},{"name":"ribosylnicotinamide kinase (phosphorylating)","type":"related"}],"termid":"GO:0050262","terms_by_termid":{"GO:0050262":null}}


id: PBO:0116761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMARCE1 pseudogene 7","termid":"PBO:0116761"}


id: PBO:0039461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD11 pseudogene 1","termid":"PBO:0039461"}


id: MONDO:0015501
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","secondary_identifiers":["Orphanet:156237"],"termid":"MONDO:0015501","xrefs":{"Monarch":{"xref_id":"0015501"}}}


id: GO:0031796
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 metabotropic GABA receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled GABA receptor binding","termid":"GO:0031795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"type 1 metabotropic GABA receptor binding","synonyms":[{"name":"type 1 metabotropic GABA receptor ligand","type":"narrow"}],"termid":"GO:0031796"}


id: PBO:0109840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_allele_systematic_id","termid":"PBO:0109840"}


id: GO:1905247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of aspartic-type peptidase activity.","definition_xrefs":["GOC:jl","PMID:21745575","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peptidase activity","termid":"GO:0010952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of aspartic-type peptidase activity","synonyms":[{"name":"activation of aspartic-type peptidase activity","type":"narrow"},{"name":"up regulation of aspartic-type peptidase activity","type":"exact"},{"name":"up-regulation of aspartic-type peptidase activity","type":"exact"},{"name":"upregulation of aspartic-type peptidase activity","type":"exact"}],"termid":"GO:1905247"}


id: GO:0071809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of fever generation via regulation of the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of prostaglandin.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of prostaglandin biosynthetic process","termid":"GO:0031392"},{"relation_name":"is_a","term_name":"regulation of fever generation","termid":"GO:0031620"},{"relation_name":"regulates","term_name":"regulation of fever generation by prostaglandin biosynthetic process","termid":"GO:0100008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of fever generation by regulation of prostaglandin biosynthesis","termid":"GO:0071809"}


id: PBO:0076325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYP antisense RNA 1","termid":"PBO:0076325"}


id: MONDO:0010935
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neuronopathy, distal hereditary motor, type 5A (obsolete MONDO:0010935)","termid":"MONDO:0010935","xrefs":{"Monarch":{"xref_id":"0010935"}}}


id: PBO:0042343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD80 molecule","termid":"PBO:0042343"}


id: PBO:0074982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-24","termid":"PBO:0074982"}


id: PBO:0056312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase 6","termid":"PBO:0056312"}


id: PBO:0069134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 384, pseudogene","termid":"PBO:0069134"}


id: GO:0061795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces the pH of the Golgi lumen, measured by the concentration of the hydrogen ion.","definition_xrefs":["PMID:23447592","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular pH reduction","termid":"GO:0051452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Golgi lumen acidification","synonyms":[{"name":"Golgi apparatus lumen acidification","type":"exact"}],"termid":"GO:0061795"}


id: PBO:0065728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain containing 2A","termid":"PBO:0065728"}


id: GO:0052422
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a host organism effects a change in the enzyme activity of its symbiont organism.","definition_xrefs":["GOC:tb","GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont catalytic activity (obsolete GO:0052422)","synonyms":[{"name":"modulation by host of symbiont enzyme activity","type":"exact"},{"name":"modulation by host of symbiont molecular function","type":"broad"}],"termid":"GO:0052422"}


id: PBO:0054125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1491","termid":"PBO:0054125"}


id: GO:0047516
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: propane-1,3-diol + NAD+ = 3-hydroxypropanal + NADH + H+.","definition_xrefs":["MetaCyc:13-PROPANEDIOL-DEHYDROGENASE-RXN","EC:1.1.1.202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"1,3-propanediol dehydrogenase activity","secondary_identifiers":["RHEA:23188"],"synonyms":[{"name":"1,3-PD:NAD+ oxidoreductase activity","type":"related"},{"name":"1,3-propanediol oxidoreductase activity","type":"related"},{"name":"1,3-propanediol:NAD+ oxidoreductase activity","type":"related"},{"name":"3-hydroxypropionaldehyde reductase activity","type":"related"},{"name":"propane-1,3-diol:NAD+ 1-oxidoreductase activity","type":"related"}],"termid":"GO:0047516"}


id: GO:0005594
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen heterotrimer containing type IX alpha chains in alpha1(IX)alpha2(IX)alpha3(IX) trimers; type IX collagen triple helices associate to form a structure that links glycosaminoglycans to type II collagen fibrils.","definition_xrefs":["ISBN:0721639976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FACIT collagen trimer","termid":"GO:0005593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"collagen type IX trimer","termid":"GO:0005594"}


id: PBO:0042277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 8 pseudogene 1","termid":"PBO:0042277"}


id: MONDO:1010962
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Benign prostatic hyperplasia that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign prostatic hyperplasia, non-human animal","termid":"MONDO:1010224"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign prostatic hyperplasia, dog","secondary_identifiers":["OMIA:002355-9615"],"termid":"MONDO:1010962","xrefs":{"Monarch":{"xref_id":"1010962"}}}


id: GO:0032608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interferon-beta due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah","PMID:15546383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type I interferon production","termid":"GO:0032606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interferon-beta production","secondary_identifiers":["GO:0035546","GO:0045350"],"synonyms":[{"name":"IFN-beta production","type":"exact"},{"name":"IFNB production","type":"exact"},{"name":"interferon-beta biosynthetic process","type":"narrow"},{"name":"interferon-beta secretion","type":"narrow"}],"termid":"GO:0032608"}


id: MONDO:0043777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Progressive enlargement of the nose due to hypertrophy of the sebaceous glands of the tip of the nose and fibrosis. It usually affects older men and is associated with long-standing acne rosacea. It presents as a pink lobulated mass with dilated vessels in the nose.","definition_xrefs":["NCIT:C34989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rosacea","termid":"MONDO:0006604"},{"relation_name":"is_a","term_name":"sebaceous gland disorder","termid":"MONDO:0006607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"rhinophyma","secondary_identifiers":["MESH:D012224","SCTID:19877001","ICD10CM:L71.1","UMLS:C0035466","MEDGEN:48451","icd11.foundation:158901546"],"synonyms":[{"name":"Rhinophymas","type":"related"},{"name":"hypertrophic rosacea","type":"related"},{"name":"rhinophyma","type":"exact"}],"termid":"MONDO:0043777","xrefs":{"Monarch":{"xref_id":"0043777"}}}


