# terms

id: PBO:0077963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 16-1","termid":"PBO:0077963"}


id: GO:0031629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of the membrane of a synaptic vesicle with the presynaptic active zone membrane, thereby releasing its cargo neurotransmitters into the synaptic cleft.","definition_xrefs":["GOC:aruk","GOC:bc","ISBN:0071120009","PMID:18618940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic vesicle membrane organization","termid":"GO:0048499"},{"relation_name":"is_a","term_name":"vesicle fusion to plasma membrane","termid":"GO:0099500"},{"relation_name":"part_of","term_name":"synaptic vesicle exocytosis","termid":"GO:0016079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0061024","GO:0016192","GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"synaptic vesicle fusion to presynaptic active zone membrane","synonyms":[{"name":"synaptic vesicle fusion","type":"broad"},{"name":"synaptic vesicle fusion to pre-synaptic membrane","type":"exact"},{"name":"synaptic vesicle fusion to presynaptic membrane","type":"exact"}],"termid":"GO:0031629"}


id: PBO:0030446
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphatase_activity","termid":"PBO:0030446"}


id: PBO:0063526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ domain containing 7","termid":"PBO:0063526"}


id: PBO:0089810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain protein Caj1/Djp1 type","termid":"PBO:0089810"}


id: FYPO:0002933
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature snoRNA measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered snoRNA or precursor level","termid":"FYPO:0005998"},{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased mature snoRNA level","synonyms":[{"name":"increased mature small nucleolar RNA level","type":"exact"},{"name":"increased mature snoRNA accumulation","type":"related"},{"name":"increased mature snoRNA level during mitotic cell cycle","type":"related"},{"name":"increased mature snoRNA level during vegetative growth","type":"exact"},{"name":"increased mature snoRNA transcript level","type":"broad"},{"name":"increased snoRNA level","type":"broad"}],"termid":"FYPO:0002933"}


id: FYPO:0007443
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endoplasmic reticulum is abolished, and the protein is present in the cytosol instead.","definition_xrefs":["PMID:32320462","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to endoplasmic reticulum during vegetative growth","termid":"FYPO:0003777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to endoplasmic reticulum membrane, with protein mislocalized to cytosol","synonyms":[{"name":"abolished protein localization to ER membrane, with protein mislocalized to cytosol","type":"exact"},{"name":"abolished protein localization to endoplasmic reticulum membrane, with protein mislocalized to cytosol during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to endoplasmic reticulum membrane, with protein mislocalized to cytosol during vegetative growth","type":"exact"}],"termid":"FYPO:0007443"}


id: GO:0061026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of cardiac muscle tissue to repair injured or damaged muscle fibers in the postnatal stage.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue regeneration","termid":"GO:0042246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle tissue regeneration","termid":"GO:0061026"}


id: PBO:0077270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 11","termid":"PBO:0077270"}


id: MONDO:0006999
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the calcareous tooth.","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"mouth disorder","termid":"MONDO:0006858"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tooth disorder","secondary_identifiers":["MEDGEN:11852","SCTID:234947003","DOID:1091","MESH:D014076","NCIT:C35077","UMLS:C0040435","EFO:1001216"],"synonyms":[{"name":"calcareous tooth disease","type":"exact"},{"name":"calcareous tooth disease or disorder","type":"exact"},{"name":"dental disorder","type":"exact"},{"name":"disease of calcareous tooth","type":"exact"},{"name":"disease or disorder of calcareous tooth","type":"exact"},{"name":"disorder of calcareous tooth","type":"exact"},{"name":"tooth disorder","type":"exact"}],"termid":"MONDO:0006999","xrefs":{"Monarch":{"xref_id":"0006999"}}}


id: GO:0044023
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H4-serine (position 1) + ATP = histone H4-phosphoserine (position 1) + ADP. This reaction is the addition of a phosphate group to the serine residue at position 1 of histone H4.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"histone H4 kinase activity","termid":"GO:0140997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140096","GO:0016740","GO:0003674","GO:0016301","GO:0003824","GO:0004672"],"is_obsolete":false,"name":"histone H4S1 kinase activity","synonyms":[{"name":"histone kinase activity (H4-S1 specific)","type":"exact"},{"name":"histone serine kinase activity (H4-S1 specific)","type":"exact"},{"name":"histone-serine kinase activity (H4-S1 specific)","type":"exact"}],"termid":"GO:0044023"}


id: GO:0002895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of central B cell tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of central tolerance induction","termid":"GO:0002646"},{"relation_name":"is_a","term_name":"regulation of B cell tolerance induction","termid":"GO:0002661"},{"relation_name":"regulates","term_name":"central B cell tolerance induction","termid":"GO:0002510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of central B cell tolerance induction","termid":"GO:0002895"}


id: SO:0000738
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the nuclear genome of cell.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_location","termid":"SO:0000735"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear_sequence","synonyms":[{"name":"nuclear sequence","type":"exact"}],"termid":"SO:0000738"}


id: PBO:0058859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8088","termid":"PBO:0058859"}


id: GO:0036342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a post-anal tail is generated and organized. A post-anal tail is a muscular region of the body that extends posterior to the anus. The post-anal tail may aid locomotion and balance.","definition_xrefs":["GOC:bf","GOC:kmv","Wikipedia:Chordate"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-anal tail morphogenesis","termid":"GO:0036342"}


id: PBO:0046513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERICH6 antisense RNA 1","termid":"PBO:0046513"}


id: MONDO:0018888
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital cornea plana (obsolete MONDO:0018888)","termid":"MONDO:0018888","xrefs":{"Monarch":{"xref_id":"0018888"}}}


id: MONDO:0006687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition characterized by a burning or tingling sensation on the lips, tongue, or entire mouth.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"headache disorder","termid":"MONDO:0021146"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"mouth disorder","termid":"MONDO:0006858"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"burning mouth syndrome","secondary_identifiers":["MESH:D002054","Orphanet:353253","MedDRA:10068065","DOID:4331","icd11.foundation:618998878","MEDGEN:14254","NCIT:C62545","SCTID:399165002","GARD:5974","UMLS:C0006430","EFO:1000850"],"synonyms":[{"name":"BMS","type":"exact"},{"name":"Orodynia","type":"exact"},{"name":"Stomatopyrosis","type":"exact"},{"name":"oral dysesthesia","type":"exact"},{"name":"stomatodynia","type":"exact"}],"termid":"MONDO:0006687","xrefs":{"Monarch":{"xref_id":"0006687"}}}


id: PBO:0041527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 16 open reading frame 89","termid":"PBO:0041527"}


id: PBO:0075985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"staufen double-stranded RNA binding protein 2","termid":"PBO:0075985"}


id: GO:0030365
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A factor is necessary for cleavage but not for poly(A) addition in mRNA 3' end processing; can stimulate poly(A) addition on substrates with a CstF binding site upstream of the AAUAAA hexanucleotide.","definition_xrefs":["PMID:10357856"],"gene_count":0,"genotype_count":0,"name":"obsolete cleavage stimulation factor activity (obsolete GO:0030365)","synonyms":[{"name":"CstF","type":"exact"},{"name":"cleavage stimulation factor activity","type":"exact"}],"termid":"GO:0030365"}


id: FYPO:0006592
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the mitotic spindle forms with microtubules emanating from only one pole, nucleated from the old spindle pole body.","definition_xrefs":["PMID:19942852","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monopolar mitotic spindle","termid":"FYPO:0000276"},{"relation_name":"output_of","term_name":"abolished mitotic spindle microtubule nucleation from spindle pole body","termid":"FYPO:0007422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000641","FYPO:0001320","FYPO:0000337","FYPO:0000002","FYPO:0000054","FYPO:0000120","FYPO:0002399","FYPO:0001985"],"is_obsolete":false,"name":"monopolar mitotic spindle nucleated from old spindle pole body","synonyms":[{"name":"monopolar mitotic spindle nucleated from old SPB","type":"exact"},{"name":"monopolar mitotic spindle nucleated from old spindle pole body during mitotic cell cycle","type":"exact"},{"name":"monopolar mitotic spindle nucleated from old spindle pole body during vegetative growth","type":"exact"}],"termid":"FYPO:0006592"}


id: GO:0030721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the spectrosome, a germline specific spherical organelle that is the precursor to the fusome.","definition_xrefs":["PMID:11131529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spectrosome organization","synonyms":[{"name":"spectrosome organisation","type":"exact"},{"name":"spectrosome organization and biogenesis","type":"related"}],"termid":"GO:0030721"}


id: PBO:0057183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 338","termid":"PBO:0057183"}


id: GO:0006907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An endocytosis process that results in the uptake of liquid material by cells from their external environment; literally 'cell drinking'. Liquid is enclosed in vesicles, called pinosomes, formed by invagination of the plasma membrane.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytosis","termid":"GO:0006897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"pinocytosis","secondary_identifiers":["Wikipedia:Pinocytosis","GO:0006908","GO:1902536"],"synonyms":[{"name":"clathrin-independent pinocytosis","type":"broad"},{"name":"fluid-phase endocytosis","type":"exact"},{"name":"single-organism pinocytosis","type":"related"}],"termid":"GO:0006907"}


id: PBO:0011133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydropteroatesynthase/2-amino-4-hydroxy-6-hydro xymethyldihydropteridinediphosphokinase/dihydroneopterin aldolase (predicted)","termid":"PBO:0011133"}


id: GO:0031290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues.","definition_xrefs":["GOC:ejs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal ganglion cell axon guidance","synonyms":[{"name":"retinal ganglion cell axon pathfinding","type":"exact"}],"termid":"GO:0031290"}


id: GO:1904824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an anaphase-promoting complex.","definition_xrefs":["GOC:TermGenie","GO_REF:0000079","PMID:16950791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"anaphase-promoting complex assembly","synonyms":[{"name":"APC assembly","type":"broad"},{"name":"anaphase promoting complex assembly","type":"exact"},{"name":"anaphase promoting complex formation","type":"exact"},{"name":"anaphase-promoting complex formation","type":"exact"},{"name":"cyclosome assembly","type":"exact"},{"name":"cyclosome formation","type":"exact"}],"termid":"GO:1904824"}


id: GO:0060168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the adenosine receptor signaling pathway. The adenosine receptor pathway is the series of molecular signals generated as a consequence of an adenosine receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045745"},{"relation_name":"is_a","term_name":"regulation of adenosine receptor signaling pathway","termid":"GO:0060167"},{"relation_name":"positively_regulates","term_name":"G protein-coupled adenosine receptor signaling pathway","termid":"GO:0001973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of adenosine receptor signaling pathway","synonyms":[{"name":"positive regulation of adenosine receptor signalling pathway","type":"exact"}],"termid":"GO:0060168"}


id: PBO:0056761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase like 15","termid":"PBO:0056761"}


id: GO:0005664
data:
  {"annotated_genes":["SJAG_03927","SJAG_02800","SJAG_05301","SJAG_01267","SJAG_02394","SJAG_03451"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[62156,71707,75520,76779,80504,81269],"is_not":false,"summary":null,"term":"GO:0005664"}]},"cv_name":"cellular_component","definition":"A multisubunit complex that is located at the replication origins of a chromosome in the nucleus.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"origin recognition complex","termid":"GO:0000808"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01267":null,"SJAG_02394":null,"SJAG_02800":null,"SJAG_03451":null,"SJAG_03927":null,"SJAG_05301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005694","GO:0005634"],"is_obsolete":false,"name":"nuclear origin of replication recognition complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"eukaryotic ORC","type":"exact"},{"name":"nuclear ORC","type":"exact"}],"termid":"GO:0005664","terms_by_termid":{"GO:0005664":null}}


id: PBO:0069135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 386, pseudogene","termid":"PBO:0069135"}


id: PBO:0040641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic leucine zipper ATF-like transcription factor 2","termid":"PBO:0040641"}


id: GO:1990064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that gives rise to the patterning of the ground tissue.","definition_xrefs":["PMID:23444357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ground tissue pattern formation","synonyms":[{"name":"ground tissue patterning","type":"exact"}],"termid":"GO:1990064"}


id: PBO:0027885
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H4-K20_trimethylation","termid":"PBO:0027885"}


id: MONDO:0022566
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete BEST1 retinopathy (obsolete MONDO:0022566)","termid":"MONDO:0022566","xrefs":{"Monarch":{"xref_id":"0022566"}}}


id: GO:0004312
data:
  {"annotated_genes":["SJAG_04972","SJAG_04107"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58806,60348],"is_not":false,"summary":null,"term":"GO:0004312"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + n malonyl-CoA + 2n NADPH + 2n H+ = long-chain fatty acid + n+1 CoA + n CO2 + 2n NADP+.","definition_xrefs":["EC:2.3.1.85"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04107":null,"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"fatty acid synthase activity","references_by_uniquename":{"GO_REF:0000002":null},"secondary_identifiers":["Reactome:R-HSA-75872","RHEA:14993","MetaCyc:FATTY-ACID-SYNTHASE-RXN","Reactome:R-HSA-163756"],"synonyms":[{"name":"acyl-CoA:malonyl-CoA C-acyltransferase (decarboxylating, oxoacyl- and enoyl-reducing and thioester-hydrolysing)","type":"related"},{"name":"fatty-acid synthase activity","type":"exact"}],"termid":"GO:0004312","terms_by_termid":{"GO:0004312":null}}


id: PBO:0059805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 31","termid":"PBO:0059805"}


id: GO:0031810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a H4 histamine receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled histamine receptor binding","termid":"GO:0031806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"H4 histamine receptor binding","synonyms":[{"name":"H4 histamine receptor ligand","type":"narrow"}],"termid":"GO:0031810"}


id: MONDO:0007159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arthrogryposis-like hand anomaly-sensorineural deafness syndrome is characterized by an arthrogryposis-like hand anomaly and sensorineural deafness. It has been described in only one family. Male-to-male transmission was observed.","definition_xrefs":["Orphanet:1144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis-like hand anomaly-sensorineural deafness syndrome","secondary_identifiers":["UMLS:C1862471","DOID:0111609","GARD:784","MEDGEN:350677","MESH:C535386","OMIM:108200","SCTID:720515009"],"synonyms":[{"name":"DA6","type":"related"},{"name":"arthrogryposis and sensorineural deafness","type":"related"},{"name":"arthrogryposis, distal, type 6","type":"related"},{"name":"arthrogryposis-like hand anomaly and sensorineural deafness","type":"related"},{"name":"distal arthrogryposis type 6","type":"exact"},{"name":"familial hand abnormality and sensori-neural deafness","type":"related"}],"termid":"MONDO:0007159","xrefs":{"Monarch":{"xref_id":"0007159"}}}


id: MONDO:0031322
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A craniofacial malformation with prosencephalic duplication; the presence of three eyes.","definition_xrefs":["PMID:7548108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pupil disorder","termid":"MONDO:0002285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"triopia","secondary_identifiers":["UMLS:C5816687","ICD10CM:Q15.8","GARD:5286","MEDGEN:1836871","Orphanet:3374"],"termid":"MONDO:0031322","xrefs":{"Monarch":{"xref_id":"0031322"}}}


id: PBO:0060583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 20","termid":"PBO:0060583"}


id: GO:0035060
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SWI/SNF-type complex that contains 8 to 14 proteins, including both conserved (core) and nonconserved components; contains the ATPase product of the Drosophila brm (brahma) or mammalian SMARCA2/BAF190B/BRM gene, or an ortholog thereof.","definition_xrefs":["GOC:bhm","PMID:10809665","PMID:12482982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SWI/SNF superfamily-type complex","termid":"GO:0070603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"brahma complex","synonyms":[{"name":"BRM complex","type":"exact"}],"termid":"GO:0035060"}


id: PBO:0002025
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human infertility","termid":"PBO:0002025"}


id: PR:O94405
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC126.13c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C126.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.13c","synonyms":[{"name":"Spom972h-SPCC126.13c","type":"exact"}],"termid":"PR:O94405"}


id: PBO:0017430
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-assayed_substrate","termid":"PBO:0017430"}


id: GO:1900035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to heat.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of cellular response to heat","termid":"GO:1900034"},{"relation_name":"negatively_regulates","term_name":"cellular response to heat","termid":"GO:0034605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to heat","synonyms":[{"name":"down regulation of cellular response to heat","type":"related"},{"name":"down regulation of cellular response to heat stress","type":"exact"},{"name":"down-regulation of cellular response to heat","type":"related"},{"name":"down-regulation of cellular response to heat stress","type":"exact"},{"name":"downregulation of cellular response to heat","type":"related"},{"name":"downregulation of cellular response to heat stress","type":"exact"},{"name":"inhibition of cellular response to heat","type":"related"},{"name":"inhibition of cellular response to heat stress","type":"exact"},{"name":"negative regulation of cellular response to heat stress","type":"exact"}],"termid":"GO:1900035"}


id: GO:1901128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving gentamycin.","definition_xrefs":["UniPathway:UPA00967","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol metabolic process","termid":"GO:0019751"},{"relation_name":"is_a","term_name":"aminoglycoside antibiotic metabolic process","termid":"GO:0030647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"gentamycin metabolic process","synonyms":[{"name":"gentamycin metabolism","type":"exact"}],"termid":"GO:1901128"}


id: FYPO:0005317
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at positions 8 and 16 of histone H4 in subtelomeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah","PMID:23851719"],"gene_count":0,"genotype_count":0,"name":"obsolete increased histone H4-K8 and H4-K16 acetylation at subtelomere during vegetative growth (obsolete FYPO:0005317)","synonyms":[{"name":"increased histone H4 acetylation (K8 and K16) at subtelomere during vegetative growth","type":"exact"},{"name":"increased histone H4-K8 and H4-K16 acetylation at subtelomere during mitotic cell cycle","type":"related"},{"name":"increased histone H4-K8 and H4-K16 acetylation at subtelomere during vegetative growth","type":"exact"},{"name":"increased histone H4K8/16 acetylation at subtelomere during vegetative growth","type":"exact"}],"termid":"FYPO:0005317"}


id: PATO:0000793
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000793 immubocompetent value (obsolete PATO:0000793)","termid":"PATO:0000793"}


id: GO:0050144
data:
  {"annotated_genes":["SJAG_01974"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[117962],"is_not":false,"summary":null,"term":"GO:0050144"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-deoxy-D-ribosyl-base1 + base2 = 2-deoxy-D-ribosyl-base2 + base1.","definition_xrefs":["EC:2.4.2.6","MetaCyc:NUCLEOSIDE-DEOXYRIBOSYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01974":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"nucleoside deoxyribosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"deoxyribose transferase activity","type":"related"},{"name":"nucleoside deoxyribosyltransferase I (purine nucleoside:purine deoxyribosyltransferase: strictly specific for transfer between purine bases)","type":"related"},{"name":"nucleoside deoxyribosyltransferase II [purine(pyrimidine) nucleoside:purine(pyrimidine) deoxyribosyltransferase]","type":"related"},{"name":"nucleoside trans-N-deoxyribosylase activity","type":"related"},{"name":"nucleoside:purine(pyrimidine) deoxy-D-ribosyltransferase activity","type":"related"},{"name":"purine(pyrimidine) nucleoside:purine(pyrimidine) deoxyribosyl transferase activity","type":"related"},{"name":"trans-N-deoxyribosylase activity","type":"related"},{"name":"trans-N-glycosidase activity","type":"related"},{"name":"trans-deoxyribosylase activity","type":"related"}],"termid":"GO:0050144","terms_by_termid":{"GO:0050144":null}}


id: PBO:0042410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 23","termid":"PBO:0042410"}


id: FYPO:0001092
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype that affects the binding of a gene product to another substance. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular function phenotype","termid":"FYPO:0000652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"binding phenotype","synonyms":[{"name":"fission yeast binding phenotype","type":"exact"}],"termid":"FYPO:0001092"}


id: PBO:0076115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 18 pseudogene 1","termid":"PBO:0076115"}


id: PBO:0088998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Armadillo-type fold protein, human IFRD1 ortholog, implicated in transcription or signaling","termid":"PBO:0088998"}


id: FYPO:0004201
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which small interfering RNA transcripts derived from the centromere outer repeat region are present at lower levels than normal.","definition_xrefs":["PomBase:mah","PMID:20211136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased centromeric outer repeat transcript level","termid":"FYPO:0003094"},{"relation_name":"is_a","term_name":"decreased siRNA level","termid":"FYPO:0004205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased centromeric outer repeat transcript-derived siRNA level","synonyms":[{"name":"decreased accumulation of centromeric outer repeat transcript-derived siRNA","type":"exact"},{"name":"decreased accumulation of siRNAs homologous to outer repeats","type":"related"},{"name":"decreased centromere outer repeat transcript-derived siRNA level","type":"exact"},{"name":"decreased centromeric outer repeat transcript-derived siRNA level during mitotic cell cycle","type":"related"},{"name":"decreased centromeric outer repeat transcript-derived siRNA level during vegetative growth","type":"exact"},{"name":"decreased level of centromeric outer repeat transcript-derived siRNA","type":"exact"},{"name":"decreased level of siRNAs homologous to outer repeats","type":"exact"},{"name":"reduced centromeric outer repeat transcript-derived siRNA level","type":"exact"}],"termid":"FYPO:0004201"}


id: PBO:0028478
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_growing_cell_tip,_with_protein_distributed_in_plasma_membrane_or_cortex","termid":"PBO:0028478"}


id: MONDO:0002715
data:
  {"annotated_genes":["SJAG_02748","SJAG_01419"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86811,89078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011962"}]},"cv_name":"mondo","definition":"Primary or metastatic malignant neoplasm involving the uterine corpus and/or the cervix.","definition_xrefs":["NCIT:C3552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive organ cancer","termid":"MONDO:0001416"},{"relation_name":"is_a","term_name":"tumor of uterus","termid":"MONDO:0021353"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01419":null,"SJAG_02748":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D014594","DOID:363","MEDGEN:57791","SCTID:371973000","UMLS:C0153567","ICD9:179"],"synonyms":[{"name":"CA - cancer of uterus","type":"exact"},{"name":"cancer of the uterus","type":"exact"},{"name":"cancer of uterus","type":"exact"},{"name":"malignant neoplasm of the uterus","type":"exact"},{"name":"malignant neoplasm of uterus","type":"exact"},{"name":"malignant tumor of the uterus","type":"exact"},{"name":"malignant tumor of uterus","type":"exact"},{"name":"malignant tumour of the uterus","type":"exact"},{"name":"malignant tumour of uterus","type":"exact"},{"name":"malignant uterine neoplasm","type":"exact"},{"name":"malignant uterine tumor","type":"exact"},{"name":"malignant uterine tumour","type":"exact"},{"name":"malignant uterus neoplasm","type":"exact"},{"name":"neoplasm of uterus","type":"broad"},{"name":"tumor of uterus","type":"broad"},{"name":"tumour of uterus","type":"broad"},{"name":"uterine cancer","type":"exact"},{"name":"uterine tumor","type":"broad"},{"name":"uterine tumour","type":"broad"},{"name":"uterus cancer","type":"exact"},{"name":"uterus neoplasm","type":"broad"}],"termid":"MONDO:0002715","terms_by_termid":{"MONDO:0011962":null},"xrefs":{"Monarch":{"xref_id":"0002715"}}}


id: MONDO:0008835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asthma, short stature, and elevated IgA","secondary_identifiers":["MESH:C565934","MEDGEN:395313","UMLS:C1859647","OMIM:208600"],"synonyms":[{"name":"asthma, short stature, and elevated IgA","type":"exact"}],"termid":"MONDO:0008835","xrefs":{"Monarch":{"xref_id":"0008835"}}}


id: GO:0047889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nitrite + 2 oxidized [2Fe-2S]-[ferredoxin] + H2O = nitrate + 2 reduced [2Fe-2S]-[ferredoxin] + 2 H+.","definition_xrefs":["RHEA:21828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrate reductase activity","termid":"GO:0008940"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, iron-sulfur protein as acceptor","termid":"GO:0016664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ferredoxin-nitrate reductase activity","secondary_identifiers":["MetaCyc:1.7.7.2-RXN","EC:1.7.7.2"],"synonyms":[{"name":"assimilatory ferredoxin-nitrate reductase activity","type":"related"},{"name":"assimilatory nitrate reductase activity","type":"broad"},{"name":"nitrate (ferredoxin) reductase activity","type":"related"},{"name":"nitrite:ferredoxin oxidoreductase activity","type":"related"}],"termid":"GO:0047889"}


id: MONDO:0006581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Miliaria rubraor prickly heat occurs deeper in the epidermis (outside layer of skin) and results in very itchy red papules (bumps).","definition_xrefs":["EFO:1000735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"miliaria","termid":"MONDO:0006580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"miliaria rubra","secondary_identifiers":["ICD9:705.1","ICD10CM:L74.0","SCTID:44279002","DOID:11153","UMLS:C0162423","MEDGEN:57902","icd11.foundation:1245016385"],"synonyms":[{"name":"miliaria crystallina","type":"related"},{"name":"prickly heat - miliaria","type":"exact"},{"name":"sudamina","type":"exact"}],"termid":"MONDO:0006581","xrefs":{"Monarch":{"xref_id":"0006581"}}}


id: MONDO:0010215
data:
  {"annotated_genes":["SJAG_02556"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88431],"is_not":false,"summary":null,"term":"MONDO:0010215"}]},"cv_name":"mondo","definition":"Any xeroderma pigmentosum in which the cause of the disease is a mutation in the ERCC4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xeroderma pigmentosum-Cockayne syndrome complex","termid":"MONDO:0016354"},{"relation_name":"is_a","term_name":"xeroderma pigmentosum","termid":"MONDO:0019600"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02556":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066","MONDO:0021190"],"is_obsolete":false,"name":"xeroderma pigmentosum group F","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110848","MESH:C562592","SCTID:42530008","Orphanet:276264","MEDGEN:120612","GARD:5628","OMIM:278760","UMLS:C0268140","NCIT:C3968"],"synonyms":[{"name":"ERCC4 xeroderma pigmentosum","type":"exact"},{"name":"XP group F","type":"exact"},{"name":"XP, group F","type":"exact"},{"name":"XP-F","type":"exact"},{"name":"XP6","type":"exact"},{"name":"XPF","type":"exact"},{"name":"xeroderma pigmentosum 6","type":"related"},{"name":"xeroderma pigmentosum VI","type":"exact"},{"name":"xeroderma pigmentosum caused by mutation in ERCC4","type":"exact"},{"name":"xeroderma pigmentosum group F","type":"exact"},{"name":"xeroderma pigmentosum group type F","type":"exact"},{"name":"xeroderma pigmentosum, complementation group F","type":"related"},{"name":"xeroderma pigmentosum, complementation group type F","type":"exact"},{"name":"xeroderma pigmentosum, group F","type":"exact"},{"name":"xeroderma pigmentosum, type 6","type":"related"},{"name":"xeroderma pigmentosum, type F/Cockayne syndrome","type":"related"}],"termid":"MONDO:0010215","terms_by_termid":{"MONDO:0010215":null},"xrefs":{"Monarch":{"xref_id":"0010215"}}}


id: FYPO:0003558
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any RNA transcribed from repeat elements, such as LTRs, retrotransposons, or wtf elements, measured in a cell is higher than normal.","definition_xrefs":["PMID:24957674","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased repeat element RNA level","synonyms":[{"name":"increased repeat element RNA accumulation","type":"related"},{"name":"increased repeat element RNA level during mitotic cell cycle","type":"related"},{"name":"increased repeat element RNA level during vegetative growth","type":"exact"},{"name":"increased repeat element transcript level","type":"exact"}],"termid":"FYPO:0003558"}


id: PBO:0057623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1193","termid":"PBO:0057623"}


id: MONDO:0850162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A B-lymphoblastic leukemia/lymphoma that is characterized by amplification of a portion of chromosome 21.","definition_xrefs":["DOID:0080651"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B-cell acute lymphoblastic leukemia","termid":"MONDO:0004947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"B-lymphoblastic leukemia/lymphoma with IAMP21","secondary_identifiers":["NCIT:C130039"],"termid":"MONDO:0850162","xrefs":{"Monarch":{"xref_id":"0850162"}}}


id: PBO:0109372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 6B","termid":"PBO:0109372"}


id: PBO:0073746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 3 pseudogene 2","termid":"PBO:0073746"}


id: GO:0075237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of zoospore movement on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of zoospore movement on or near host (obsolete GO:0075237)","termid":"GO:0075237"}


id: PBO:0073648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"salt inducible kinase 2","termid":"PBO:0073648"}


id: PBO:0041206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bystin like","termid":"PBO:0041206"}


id: GO:0052714
data:
  {"annotated_genes":["SJAG_01219"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110664],"is_not":false,"summary":null,"term":"GO:0052714"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: mannosyl-inositol phosphorylceramide + H2O = C26-phytoceramide + mannosylphosphorylinositol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphorylceramide phospholipase activity","termid":"GO:0052713"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"mannosyl-inositol phosphorylceramide phospholipase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0052714","terms_by_termid":{"GO:0052714":null}}


id: MONDO:0002208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete vulva adenocarcinoma (obsolete MONDO:0002208)","termid":"MONDO:0002208","xrefs":{"Monarch":{"xref_id":"0002208"}}}


id: PBO:0075160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 16","termid":"PBO:0075160"}


id: PBO:0039097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylhomocysteinase pseudogene 1","termid":"PBO:0039097"}


id: PR:Q9USW0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC21B10.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USW0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C21B10.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21B10.02","synonyms":[{"name":"Spom972h-SPBC21B10.02","type":"exact"}],"termid":"PR:Q9USW0"}


id: MONDO:1011497
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ehlers-Danlos syndrome that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, non-human animal","termid":"MONDO:1011425"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, sheep","secondary_identifiers":["OMIA:000327-9940"],"termid":"MONDO:1011497","xrefs":{"Monarch":{"xref_id":"1011497"}}}


id: MONDO:0013207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Fuchs' endothelial dystrophy","termid":"MONDO:0005321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal dystrophy, fuchs endothelial, 7","secondary_identifiers":["OMIM:613271","UMLS:C2750447","GARD:18222","MEDGEN:413849","MESH:C567674"],"synonyms":[{"name":"FECD7","type":"exact"},{"name":"Fcd4 locus","type":"related"},{"name":"corneal dystrophy, Fuchs endothelial, 7","type":"related"},{"name":"corneal dystrophy, Fuchs endothelial, late-onset","type":"related"}],"termid":"MONDO:0013207","xrefs":{"Monarch":{"xref_id":"0013207"}}}


id: PBO:0030903
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_substance_in_cell_during_vegetative_growth","termid":"PBO:0030903"}


id: GO:1990568
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A centromere complex assembly protein that is required for the deposition of CENP-A on the centromere. The Mis18 complex localizes to centromeres just prior to the pre-nucleosomal HJURP/CENP-A/H4 complex and is absolutely required for the CENP-A-specific chaperone, Holliday junction recognition protein (HJURP) to reach the centromeres. Plk1 phosphorylation activates Mis18 complex recruitment to the centromeres during G1. CDK phosphorylation of MISBP1 during G2 and mitosis, prior to the metaphase-to-anaphase transition, negatively regulates complex assembly.","definition_xrefs":["GOC:bhm","PMID:25036634"],"gene_count":0,"genotype_count":0,"name":"obsolete MIS18 complex (obsolete GO:1990568)","synonyms":[{"name":"MIS18 complex","type":"exact"}],"termid":"GO:1990568"}


id: GO:0021621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the hypoglossal nerve. This process pertains to the physical shaping of a rudimentary structure. This motor nerve innervates all the intrinsic and all but one of the extrinsic muscles of the tongue.","definition_xrefs":["GOC:dgh","GOC:dph","ISBN:0838580343","GOC:jid","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve structural organization","termid":"GO:0021604"},{"relation_name":"part_of","term_name":"hypoglossal nerve morphogenesis","termid":"GO:0021618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypoglossal nerve structural organization","synonyms":[{"name":"CN XII structural organization","type":"related"},{"name":"hypoglossal nerve structural organisation","type":"exact"}],"termid":"GO:0021621"}


id: PBO:0073836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC7A11 antisense RNA 1","termid":"PBO:0073836"}


id: PBO:0068102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 409","termid":"PBO:0068102"}


id: PBO:0065290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich transmembrane protein 4","termid":"PBO:0065290"}


id: PBO:0089188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Maf-like protein, nucleoside-triphosphate diphosphatase, human ASMTL ortholog","termid":"PBO:0089188"}


id: PBO:0005813
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe CAspase 1","termid":"PBO:0005813"}


id: PBO:0071692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 24","termid":"PBO:0071692"}


id: GO:0090710
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-5-phosphomevalonate + ATP = ADP + CO2 + isopentenyl phosphate + phosphate.","definition_xrefs":["RHEA:40955","PMID:24375100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"phosphomevalonate decarboxylase activity","secondary_identifiers":["EC:4.1.1.99","MetaCyc:RXN-10067"],"termid":"GO:0090710"}


id: SO:0000957
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, double-stranded, linear DNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"linear","termid":"SO:0000987"},{"relation_name":"is_a","term_name":"double_stranded_DNA_chromosome","termid":"SO:0000955"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linear_double_stranded_DNA_chromosome","synonyms":[{"name":"linear double stranded DNA chromosome","type":"exact"}],"termid":"SO:0000957"}


id: PBO:0034488
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromatin_at_boundary_element_IRC1L","termid":"PBO:0034488"}


id: MOD:00802
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"a protein modification that effectively converts an L-histidine residue to L-histidino vanadium tetraoxide","definition_xrefs":["PubMed:16494433","RESID:AA0395","PubMed:8552646","PubMed:10543953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vanadium containing modified residue","termid":"MOD:00772"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-histidino vanadium tetraoxide","synonyms":[{"name":"(4-[(2S)-2-amino-2-carboxyethyl]-1H-imidazol-1-yl) (dihydroxy)dioxovanadium","type":"exact"},{"name":"1'-vanadato-L-histidine","type":"exact"},{"name":"L-histidino vanadium tetraoxide","type":"exact"},{"name":"N(tau)-vanadatohistidine","type":"exact"},{"name":"NtauH2VO4His","type":"exact"},{"name":"bromoperoxidase vanadium cofactor","type":"exact"},{"name":"chloroperoxidase vanadium cofactor","type":"exact"},{"name":"dihydrogen (4-[(2S)-2-amino-2-carboxyethyl]-1H-imidazol-1-yl) (tetraoxido)vanadate","type":"exact"},{"name":"haloperoxidase vanadium cofactor","type":"exact"},{"name":"histidine-1-vanadate","type":"exact"},{"name":"histidine-N(epsilon)-vanadate","type":"exact"},{"name":"histidine-N1'-vanadate","type":"exact"},{"name":"tele-vanadatohistidine","type":"exact"}],"termid":"MOD:00802"}


id: PBO:0043267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 34","termid":"PBO:0043267"}


id: PBO:0043028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 3","termid":"PBO:0043028"}


id: PBO:0001365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic pyrophosphatase (predicted)","termid":"PBO:0001365"}


id: PBO:0079195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 24, pseudogene","termid":"PBO:0079195"}


id: GO:0048628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for a myoblast to attain its fully functional state. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["GOC:mtg_muscle","GOC:dph","CL:0000056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell maturation","termid":"GO:0048469"},{"relation_name":"part_of","term_name":"myoblast development","termid":"GO:0048627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast maturation","termid":"GO:0048628"}


id: PBO:0041186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin like 10, pseudogene","termid":"PBO:0041186"}


id: PBO:0113524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar aminopeptidase Y; processed to mature form by Prb1p; targeted to vacuole via Vps10p-dependent endosomal vacuolar protein sorting pathway","termid":"PBO:0113524"}


id: GO:0045906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of vasoconstriction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vasoconstriction","termid":"GO:0019229"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"vasoconstriction","termid":"GO:0042310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vasoconstriction","synonyms":[{"name":"down regulation of vasoconstriction","type":"exact"},{"name":"down-regulation of vasoconstriction","type":"exact"},{"name":"downregulation of vasoconstriction","type":"exact"},{"name":"inhibition of vasoconstriction","type":"narrow"}],"termid":"GO:0045906"}


id: MONDO:0002370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, borderline, or malignant transitional cell neoplasm arising from the ovary. It constitutes between 1% and 2% of all ovarian neoplasms. The average age at presentation is about 50 years. Grossly it is usually unilateral, firm and white or yellowish. Microscopically it consists of solid and cystic nests of epithelial cells resembling transitional epithelium surrounded by an abundant stromal component of dense, fibroblastic nature.","definition_xrefs":["NCIT:C3872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian epithelial tumor","termid":"MONDO:0002229"},{"relation_name":"is_a","term_name":"Brenner tumor","termid":"MONDO:0024235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian Brenner tumor","secondary_identifiers":["DOID:2636","SCTID:254859006","UMLS:C5234884","MEDGEN:1716777"],"synonyms":[{"name":"Brenner neoplasm of ovary","type":"exact"},{"name":"Brenner neoplasm of the ovary","type":"exact"},{"name":"Brenner tumor","type":"broad"},{"name":"Brenner tumor of ovary","type":"exact"},{"name":"Brenner tumor of the ovary","type":"exact"},{"name":"Brenner tumour","type":"broad"},{"name":"Brenner tumour of ovary","type":"exact"},{"name":"Brenner tumour of the ovary","type":"exact"},{"name":"benign ovarian Brenner tumor","type":"narrow"},{"name":"benign ovarian Brenner tumour","type":"narrow"},{"name":"ovarian Brenner neoplasm","type":"exact"},{"name":"ovarian Brenner tumor","type":"exact"},{"name":"ovary Brenner tumor","type":"exact"},{"name":"ovary Brenner tumour","type":"exact"}],"termid":"MONDO:0002370","xrefs":{"Monarch":{"xref_id":"0002370"}}}


id: MONDO:1010235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinal muscular atrophy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurodegenerative disease, non-human animal","termid":"MONDO:1012953"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"},{"relation_name":"is_a","term_name":"neuromuscular disease, non-human animal","termid":"MONDO:1012983"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal muscular atrophy, non-human animal","secondary_identifiers":["OMIA:000939"],"termid":"MONDO:1010235","xrefs":{"Monarch":{"xref_id":"1010235"}}}


id: MONDO:0003664
data:
  {"annotated_genes":["SJAG_02539","SJAG_01351","SJAG_05283","SJAG_02297","SJAG_03497","SJAG_03153","SJAG_00839","SJAG_04495","SJAG_01077","SJAG_04881","SJAG_00846","SJAG_02009","SJAG_02796","SJAG_04334","SJAG_01162","SJAG_00930","SJAG_00988","SJAG_01183","SJAG_00605","SJAG_04731","SJAG_04192"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010480"},{"annotations":[87238,87239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009134"},{"annotations":[87282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007109"},{"annotations":[88181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008494"},{"annotations":[87243],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009902"},{"annotations":[87086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012204"},{"annotations":[87691],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009259"},{"annotations":[88000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009284"},{"annotations":[87462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009295"},{"annotations":[88881],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009113"},{"annotations":[87972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013275"},{"annotations":[88662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019531"},{"annotations":[89146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859172"},{"annotations":[87253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012981"},{"annotations":[88255,88254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009340"},{"annotations":[88193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008493"},{"annotations":[87232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012992"},{"annotations":[88711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010438"},{"annotations":[87745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014166"},{"annotations":[87383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009950"},{"annotations":[86984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012700"},{"annotations":[89014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019107"},{"annotations":[87424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008165"},{"annotations":[87575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014221"}]},"cv_name":"mondo","definition":"Anemia resulting from the premature destruction of the peripheral blood red cells. It may be congenital or it may be caused by infections, medications, or malignancies.","definition_xrefs":["NCIT:C34376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normocytic anemia","termid":"MONDO:0004139"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00605":null,"SJAG_00839":null,"SJAG_00846":null,"SJAG_00930":null,"SJAG_00988":null,"SJAG_01077":null,"SJAG_01162":null,"SJAG_01183":null,"SJAG_01351":null,"SJAG_02009":null,"SJAG_02297":null,"SJAG_02539":null,"SJAG_02796":null,"SJAG_03153":null,"SJAG_03497":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04731":null,"SJAG_04881":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"hemolytic anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1916","MESH:D000743","NANDO:2200636","SCTID:61261009","UMLS:C0002878","ICD10CM:D55-D59","DOID:583"],"synonyms":[{"name":"anaemia hemolytic","type":"exact"},{"name":"anemia hemolytic","type":"exact"},{"name":"anemia, hemolytic","type":"exact"},{"name":"hemolytic anemia","type":"exact"}],"termid":"MONDO:0003664","terms_by_termid":{"MONDO:0007109":null,"MONDO:0008165":null,"MONDO:0008493":null,"MONDO:0008494":null,"MONDO:0009113":null,"MONDO:0009134":null,"MONDO:0009259":null,"MONDO:0009284":null,"MONDO:0009295":null,"MONDO:0009340":null,"MONDO:0009902":null,"MONDO:0009950":null,"MONDO:0010438":null,"MONDO:0010480":null,"MONDO:0012204":null,"MONDO:0012700":null,"MONDO:0012981":null,"MONDO:0012992":null,"MONDO:0013275":null,"MONDO:0014166":null,"MONDO:0014221":null,"MONDO:0019107":null,"MONDO:0019531":null,"MONDO:0859172":null},"xrefs":{"Monarch":{"xref_id":"0003664"}}}


id: GO:0015410
data:
  {"annotated_genes":["SJAG_03850"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110507],"is_not":false,"summary":null,"term":"GO:0015410"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Mn2+(out) = ADP + phosphate + Mn2+(in).","definition_xrefs":["RHEA:17365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"manganese ion transmembrane transporter activity","termid":"GO:0005384"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ABC-type manganese transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:7.2.2.5","Reactome:R-HSA-5692462","MetaCyc:3.6.3.35-RXN"],"synonyms":[{"name":"ABC-type Mn(2+) transporter","type":"related"},{"name":"ATP-dependent manganese transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled manganese transmembrane transporter activity","type":"related"},{"name":"manganese ABC transporter","type":"narrow"},{"name":"manganese transmembrane transporter activity, phosphorylative mechanism","type":"related"},{"name":"manganese-transporting ATPase activity","type":"related"}],"termid":"GO:0015410","terms_by_termid":{"GO:0015410":null}}


id: PBO:0082443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B-type cyclin involved in DNA replication during S phase; activates Cdc28p to promote initiation of DNA synthesis; functions in formation of mitotic spindles along with Clb3p and Clb4p; most abundant during late G1 phase; CLB5 has a paralog, CLB6, that arose from the whole genome duplication","termid":"PBO:0082443"}


id: PBO:0063025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase pseudogene 5","termid":"PBO:0063025"}


id: MONDO:0024634
data:
  {"annotated_genes":["SJAG_01082","SJAG_01620","SJAG_04394","SJAG_02426","SJAG_02226","SJAG_04206","SJAG_01837","SJAG_04699","SJAG_00980","SJAG_02231","SJAG_03453","SJAG_02187","SJAG_02748"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88268,88269,88270,89147,88266,88272,88271,88267,88273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0005575"},{"annotations":[88158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007356"},{"annotations":[86973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012249"},{"annotations":[87423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013699"},{"annotations":[87425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013710"},{"annotations":[87435,87436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008018"}]},"cv_name":"mondo","definition":"A disease that involves the large intestine.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00980":null,"SJAG_01082":null,"SJAG_01620":null,"SJAG_01837":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02231":null,"SJAG_02426":null,"SJAG_02748":null,"SJAG_03453":null,"SJAG_04206":null,"SJAG_04394":null,"SJAG_04699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"large intestine disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0341321","MEDGEN:574315","SCTID:119523007"],"synonyms":[{"name":"disease of large intestine","type":"exact"},{"name":"disease or disorder of large intestine","type":"exact"},{"name":"disorder of large intestine","type":"exact"},{"name":"large intestine disease or disorder","type":"exact"}],"termid":"MONDO:0024634","terms_by_termid":{"MONDO:0005575":null,"MONDO:0007356":null,"MONDO:0008018":null,"MONDO:0012249":null,"MONDO:0013699":null,"MONDO:0013710":null},"xrefs":{"Monarch":{"xref_id":"0024634"}}}


id: GO:0033084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of immature T cell proliferation in the thymus.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immature T cell proliferation","termid":"GO:0033083"},{"relation_name":"regulates","term_name":"immature T cell proliferation in thymus","termid":"GO:0033080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of immature T cell proliferation in thymus","synonyms":[{"name":"regulation of thymic T cell proliferation","type":"exact"},{"name":"regulation of thymocyte cell proliferation","type":"exact"},{"name":"regulation of thymocyte proliferation","type":"exact"}],"termid":"GO:0033084"}


id: GO:0098892
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the postsynaptic specialization membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mf","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of postsynaptic membrane","termid":"GO:0098890"},{"relation_name":"part_of","term_name":"postsynaptic specialization membrane","termid":"GO:0099634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of postsynaptic specialization membrane","termid":"GO:0098892"}


id: PBO:0054955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2369","termid":"PBO:0054955"}


id: GO:0002056
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to cytosine.","definition_xrefs":["GOC:vw","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase binding","termid":"GO:0002061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"cytosine binding","termid":"GO:0002056"}


id: MONDO:0007722
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterochromia iridis","secondary_identifiers":["MESH:C538115","HP:0001100","MEDGEN:98395","OMIM:142500","UMLS:C0423318"],"synonyms":[{"name":"heterochromia iridis","type":"exact"},{"name":"heterochromia iridis (disease)","type":"exact"}],"termid":"MONDO:0007722","xrefs":{"Monarch":{"xref_id":"0007722"}}}


id: PBO:0061988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily B member 8 pseudogene","termid":"PBO:0061988"}


id: PBO:0035989
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cAMP","termid":"PBO:0035989"}


id: MONDO:0008686
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Woolly hair is a rare congenital abnormality of the structure of the scalp hair marked by extreme kinkiness of the hair.","definition_xrefs":["Orphanet:170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hair anomaly","termid":"MONDO:0019278"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated familial wooly hair disorder","secondary_identifiers":["DOID:0111572","GARD:5597","MedDRA:10048017","UMLS:C0343073","HP:0002224","MEDGEN:87469","MESH:C536745","SCTID:52564001"],"synonyms":[{"name":"ADWH","type":"related"},{"name":"familial woolly hair (autosomal recessive)","type":"related"},{"name":"familial woolly hair syndrome","type":"exact"},{"name":"familial wooly hair (autosomal recessive)","type":"related"},{"name":"familial wooly hair syndrome","type":"exact"},{"name":"hereditary woolly hair (autosomal dominant)","type":"related"},{"name":"hereditary woolly hair syndrome","type":"exact"},{"name":"hereditary wooly hair (autosomal dominant)","type":"related"},{"name":"hereditary wooly hair syndrome","type":"exact"},{"name":"woolly hair","type":"exact"},{"name":"woolly hair syndrome","type":"related"},{"name":"woolly hair, autosomal dominant","type":"related"},{"name":"wooly hair","type":"exact"},{"name":"wooly hair syndrome","type":"related"},{"name":"wooly hair, autosomal dominant","type":"related"}],"termid":"MONDO:0008686","xrefs":{"Monarch":{"xref_id":"0008686"}}}


id: GO:2000743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of anterior head development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of anterior head development","termid":"GO:2000742"},{"relation_name":"negatively_regulates","term_name":"anterior head development","termid":"GO:0097065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of anterior head development","termid":"GO:2000743"}


id: GO:0061048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the process in which a highly ordered sequence of patterning events generates the branched structures of the lung, consisting of reiterated combinations of bud outgrowth, elongation, and dichotomous subdivision of terminal units.","definition_xrefs":["GOC:yaf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of branching involved in lung morphogenesis","termid":"GO:0061046"},{"relation_name":"is_a","term_name":"negative regulation of morphogenesis of an epithelium","termid":"GO:1905331"},{"relation_name":"negatively_regulates","term_name":"epithelial tube branching involved in lung morphogenesis","termid":"GO:0060441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of branching involved in lung morphogenesis","termid":"GO:0061048"}


id: GO:0080177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the plastoglobule. Plastoglobule is a lipoprotein particle present in chloroplasts. They are rich in non-polar lipids (triglycerides, esters) as well as in prenylquinones, plastoquinone and tocopherols. Plastoglobules are often associated with thylakoid membranes, suggesting an exchange of lipids with thylakoids.","definition_xrefs":["PMID:20813909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"part_of","term_name":"chloroplast organization","termid":"GO:0009658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plastoglobule organization","synonyms":[{"name":"plastoglobule organisation","type":"exact"}],"termid":"GO:0080177"}


id: PBO:0061917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily D member 5","termid":"PBO:0061917"}


id: PBO:0063555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paternally expressed 13","termid":"PBO:0063555"}


id: PBO:0069406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 666, pseudogene","termid":"PBO:0069406"}


id: PBO:0000532
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitotic Catastrophe Suppressor","termid":"PBO:0000532"}


id: PBO:0049544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 7","termid":"PBO:0049544"}


id: PBO:0081644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 570","termid":"PBO:0081644"}


id: GO:0035187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific behavior of an organism during the emergence from an egg shell. In Drosophila for example, the larva swings its head reiteratively through a semicircular arc, using its mouth hooks to tear apart the chorion in front of it and thus free itself from within the egg shell.","definition_xrefs":["GOC:pr","PMID:10436051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"},{"relation_name":"part_of","term_name":"hatching","termid":"GO:0035188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hatching behavior","synonyms":[{"name":"hatching behaviour","type":"exact"}],"termid":"GO:0035187"}


id: PBO:0049275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GSK3B interacting protein","termid":"PBO:0049275"}


id: PBO:0028650
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rRNA_precursor_level","termid":"PBO:0028650"}


id: MONDO:0043226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A postpartum condition consists of persistent lactation and amenorrhea in patients not breast feeding.","definition_xrefs":["MESH:D002640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactorrhea","termid":"MONDO:0009256"},{"relation_name":"is_a","term_name":"acquired hyperprolactinemia","termid":"MONDO:0024305"},{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"},{"relation_name":"is_a","term_name":"puerperal disorder","termid":"MONDO:0044013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"postpartum amenorrhea-galactorrhea syndrome","secondary_identifiers":["MEDGEN:2993","SCTID:85039006","UMLS:C0008043"],"synonyms":[{"name":"Chiari-Frommel syndrome","type":"exact"},{"name":"Chiari-frommel syndrome","type":"related"},{"name":"Frommel disease","type":"related"},{"name":"Frommel's disease","type":"related"},{"name":"disease, Frommel","type":"related"},{"name":"disease, Frommel's","type":"related"},{"name":"persistent postpartum amenorrhea-galactorrhea syndrome","type":"related"},{"name":"postpartum amenorrhea-galactorrhea syndrome","type":"exact"},{"name":"postpartum amenorrhoea-galactorrhea syndrome","type":"related"},{"name":"syndrome, Chiari-Frommel","type":"related"}],"termid":"MONDO:0043226","xrefs":{"Monarch":{"xref_id":"0043226"}}}


id: PBO:0046931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 47 member E","termid":"PBO:0046931"}


id: MONDO:0014183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 23, autosomal recessive","secondary_identifiers":["MEDGEN:815812","OMIM:615431","UMLS:C3809482","GARD:18198"],"synonyms":[{"name":"MYP23","type":"related"},{"name":"myopia 23, autosomal recessive","type":"exact"}],"termid":"MONDO:0014183","xrefs":{"Monarch":{"xref_id":"0014183"}}}


id: PBO:0109454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LHX8 antisense RNA 1","termid":"PBO:0109454"}


id: PBO:0015704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP1 subfamily, Sds21","termid":"PBO:0015704"}


id: MONDO:0016279
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Adenosarcoma of the cervix uteri is a rare subtype of malignant mixed epithelial and mesenchymal tumor composed of benign or mildly atypical glandular elements and a surrounding low-grade malignant stroma, often containing heterologous elements, such as areas of sex-cord-like or smooth muscle differentiation. It usually presents with vaginal bleeding or discharge, lower abdominal pain and/or a cervical mass or polyp. The tumor may arise from pre-existing endometriosis and patients may have a history of recurrent cervical polyps.","definition_xrefs":["Orphanet:213792"],"gene_count":0,"genotype_count":0,"name":"obsolete adenosarcoma of the cervix uteri (obsolete MONDO:0016279)","termid":"MONDO:0016279","xrefs":{"Monarch":{"xref_id":"0016279"}}}


id: PBO:0060658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natural cytotoxicity triggering receptor 2","termid":"PBO:0060658"}


id: MONDO:0020008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare immune system disease.","gene_count":0,"genotype_count":0,"name":"obsolete rare immune disease (obsolete MONDO:0020008)","secondary_identifiers":["Orphanet:98004"],"synonyms":[{"name":"rare immune system disease","type":"exact"}],"termid":"MONDO:0020008","xrefs":{"Monarch":{"xref_id":"0020008"}}}


id: PBO:0091154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase","termid":"PBO:0091154"}


id: GO:0106288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of deadenylation-dependent decapping of nuclear-transcribed mRNA.","definition_xrefs":["PMID:32354837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA catabolic process","termid":"GO:0061013"},{"relation_name":"regulates","term_name":"deadenylation-dependent decapping of nuclear-transcribed mRNA","termid":"GO:0000290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016071"],"is_obsolete":false,"name":"regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA","termid":"GO:0106288"}


id: GO:0015006
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A copper-containing electron carrier acting between cytochrome b(6)-f and P700 of photosystem I.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete plastocyanin (obsolete GO:0015006)","synonyms":[{"name":"plastocyanin","type":"exact"}],"termid":"GO:0015006"}


id: MONDO:1010350
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Macular corneal dystrophy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corneal dystrophy, non-human animal","termid":"MONDO:1010320"},{"relation_name":"is_a","term_name":"retinal degeneration, non-human animal","termid":"MONDO:1010326"},{"relation_name":"is_a","term_name":"perceptual disorders, non-human animal","termid":"MONDO:1011343"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macular corneal dystrophy, non-human animal","secondary_identifiers":["OMIA:002071"],"termid":"MONDO:1010350","xrefs":{"Monarch":{"xref_id":"1010350"}}}


id: SO:0001830
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A PCR product obtained by applying the AFLP technique, based on a restriction enzyme digestion of genomic DNA and an amplification of the resulting fragments.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"is_a","term_name":"PCR_product","termid":"SO:0000006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFLP_fragment","secondary_identifiers":["http://en.wikipedia.org/wiki/Amplified_fragment_length_polymorphism"],"synonyms":[{"name":"AFLP","type":"exact"},{"name":"AFLP fragment","type":"exact"},{"name":"AFLP-PCR","type":"exact"},{"name":"amplified fragment length polymorphism","type":"exact"},{"name":"amplified fragment length polymorphism PCR","type":"exact"}],"termid":"SO:0001830"}


id: GO:0007387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process giving rise to specification of cell identity in the anterior compartments of the segmented embryo.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compartment pattern specification","termid":"GO:0007386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior compartment pattern formation","synonyms":[{"name":"anterior compartment pattern specification","type":"related"}],"termid":"GO:0007387"}


id: PBO:0086254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that positively regulates actin assembly; forms a homodimer and interacts with G-actin; localization to the bud neck and bud tip requires Spa2p; YFR016C is not an essential gene","termid":"PBO:0086254"}


id: GO:0072076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a nephrogenic mesenchyme from an initial condition to its mature state. This process begins with the formation of nephrogenic mesenchyme and ends with the mature structure. Nephrogenic mesenchyme is the tissue made up of loosely connected mesenchymal cells in the nephron.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney mesenchyme development","termid":"GO:0072074"},{"relation_name":"part_of","term_name":"nephron development","termid":"GO:0072006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephrogenic mesenchyme development","termid":"GO:0072076"}


id: PBO:0030902
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_substance_in_cell_during_vegetative_growth","termid":"PBO:0030902"}


id: PBO:0074483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET and MYND domain containing 2","termid":"PBO:0074483"}


id: PBO:0069071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 318, pseudogene","termid":"PBO:0069071"}


id: GO:0043397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of corticotropin-releasing hormone secretion.","definition_xrefs":["GOC:go_curators","PMID:11027914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptide hormone secretion","termid":"GO:0090276"},{"relation_name":"regulates","term_name":"corticotropin-releasing hormone secretion","termid":"GO:0043396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of corticotropin-releasing hormone secretion","synonyms":[{"name":"regulation of CRF secretion","type":"exact"},{"name":"regulation of CRH secretion","type":"exact"},{"name":"regulation of corticotropin-releasing factor secretion","type":"exact"}],"termid":"GO:0043397"}


id: MONDO:0002997
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the anterior cranial fossa.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterior cranial fossa meningioma","secondary_identifiers":["DOID:4436","NCIT:C5286","MEDGEN:272315","UMLS:C1332301"],"synonyms":[{"name":"anterior cranial fossa meningioma (disease)","type":"exact"},{"name":"anterior fossa meningioma","type":"exact"},{"name":"meningioma (disease) of anterior cranial fossa","type":"exact"},{"name":"meningioma of anterior cranial fossa","type":"exact"},{"name":"meningioma of anterior fossa","type":"exact"},{"name":"meningioma of the anterior cranial fossa","type":"exact"},{"name":"meningioma of the anterior fossa","type":"exact"}],"termid":"MONDO:0002997","xrefs":{"Monarch":{"xref_id":"0002997"}}}


id: PBO:0087243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine protein phosphatase involved in formation of FAR complex; inhibits mitophagy by dephosphorylating Atg32p; required for glycogen accumulation; interacts with Tap42p, which binds to and regulates other protein phosphatases","termid":"PBO:0087243"}


id: MONDO:0004733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm that affects the pyriform sinus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypopharynx cancer","termid":"MONDO:0005806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"pyriform sinus cancer","secondary_identifiers":["ICD9:148.1","ICD10CM:C12","SCTID:363401000","MEDGEN:102267","DOID:9235","NCIT:C3531","UMLS:C0153400"],"synonyms":[{"name":"malignant neoplasm of pyriform fossa","type":"exact"},{"name":"malignant neoplasm of pyriform sinus","type":"exact"},{"name":"malignant neoplasm of the pyriform fossa","type":"exact"},{"name":"malignant neoplasm of the pyriform sinus","type":"exact"},{"name":"malignant pyriform fossa neoplasm","type":"exact"},{"name":"malignant pyriform fossa tumor","type":"exact"},{"name":"malignant pyriform fossa tumour","type":"exact"},{"name":"malignant pyriform sinus neoplasm","type":"exact"},{"name":"malignant pyriform sinus tumor","type":"exact"},{"name":"malignant pyriform sinus tumour","type":"exact"},{"name":"malignant tumor of pyriform fossa","type":"exact"},{"name":"malignant tumor of pyriform sinus","type":"exact"},{"name":"malignant tumor of the pyriform fossa","type":"exact"},{"name":"malignant tumor of the pyriform sinus","type":"exact"},{"name":"malignant tumour of pyriform fossa","type":"exact"},{"name":"malignant tumour of pyriform sinus","type":"exact"},{"name":"malignant tumour of the pyriform fossa","type":"exact"},{"name":"malignant tumour of the pyriform sinus","type":"exact"}],"termid":"MONDO:0004733","xrefs":{"Monarch":{"xref_id":"0004733"}}}


id: MONDO:0020550
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gestational choriocarcinoma is a gestational trophoblastic tumor (GTT) occurring secondary to pregnancy (ectopic or normal), miscarriage, voluntary termination of pregnancy (VTP) or a hydatidiform mole.","definition_xrefs":["Orphanet:99926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive organ cancer","termid":"MONDO:0001416"},{"relation_name":"is_a","term_name":"extragonadal nonseminomatous germ cell tumor","termid":"MONDO:0003578"},{"relation_name":"is_a","term_name":"choriocarcinoma","termid":"MONDO:0005207"},{"relation_name":"is_a","term_name":"gestational trophoblastic neoplasm","termid":"MONDO:0018944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"gestational choriocarcinoma","secondary_identifiers":["icd11.foundation:2136066651","DOID:2025","ICD9:181","GARD:19712","MEDGEN:138102","NCIT:C4646","SCTID:417570003","UMLS:C0349557"],"synonyms":[{"name":"gestational choriocarcinoma","type":"exact"},{"name":"gestational choriocarcinoma (morphologic abnormality)","type":"exact"},{"name":"gestational chorionepithelioma","type":"exact"},{"name":"molar pregnancy with choriocarcinoma","type":"exact"}],"termid":"MONDO:0020550","xrefs":{"Monarch":{"xref_id":"0020550"}}}


id: GO:0072586
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of ATP-hydrolyzing DNA topoisomerase. DNA topoisomerase (ATP-hydrolyzing) regulator activity catalyzes a DNA topological transformation by transiently cleaving a pair of complementary DNA strands to form a gate through which a second double-stranded DNA segment is passed, after which the severed strands in the first DNA segment are rejoined; product release is coupled to ATP binding and hydrolysis; changes the linking number in multiples of 2.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"},{"relation_name":"is_a","term_name":"ATPase regulator activity","termid":"GO:0060590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0030234"],"is_obsolete":false,"name":"DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) regulator activity","termid":"GO:0072586"}


id: PBO:0035902
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_H4-K20_dimethylation_at_double-strand_break_site_during_vegetative_growth","termid":"PBO:0035902"}


id: GO:0030302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a deoxynucleotide, a deoxyribonucleoside in ester linkage to phosphate, commonly at the 5' position of deoxyribose, into, out of or within a cell.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide transport","termid":"GO:0006862"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"deoxynucleotide transport","termid":"GO:0030302"}


id: PBO:0089545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic translation associated GTP binding protein Gtp1","termid":"PBO:0089545"}


id: GO:0030343
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: calciol (vitamin D3) + reduced [NADPH--hemoprotein reductase] + O2 = calcidiol + oxidized [NADPH--hemoprotein reductase] + H2O + H+.","definition_xrefs":["RHEA:32903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"vitamin D3 25-hydroxylase activity","secondary_identifiers":["Reactome:R-HSA-209845","MetaCyc:RXN-9829","Reactome:R-HSA-5602147"],"synonyms":[{"name":"cholecalciferol 25-hydroxylase activity","type":"exact"}],"termid":"GO:0030343"}


id: PBO:0113016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bacterially-derived sulfatase; required for use of alkyl sulfates as sulfur source","termid":"PBO:0113016"}


id: FYPO:0000653
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype that affects DNA binding. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"DNA binding phenotype","synonyms":[{"name":"fission yeast DNA binding phenotype","type":"exact"}],"termid":"FYPO:0000653"}


id: PBO:0012236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase type 2A Ppa1","termid":"PBO:0012236"}


id: PBO:0042851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 61","termid":"PBO:0042851"}


id: MONDO:0850349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An astroblastoma that is characterized by astroblastoma-like morphology with MN1 rearrangements involving the meningioma 1 (MN1) gene on chromosome 22q.","definition_xrefs":["DOID:0080904"],"direct_ancestors":[{"relation_name":"is_a","term_name":"astroblastoma","termid":"MONDO:0016707"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"astroblastoma, MN1-altered","termid":"MONDO:0850349","xrefs":{"Monarch":{"xref_id":"0850349"}}}


id: GO:1990355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The generation of L-methionine from methionine sulphoxide.","definition_xrefs":["PMID:24118096"],"gene_count":0,"genotype_count":0,"name":"obsolete L-methionine salvage from methionine sulphoxide (obsolete GO:1990355)","synonyms":[{"name":"methionine salvage from methionine sulphoxide","type":"broad"}],"termid":"GO:1990355"}


id: GO:1904939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of DNA nucleotidylexotransferase activity.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GOC:BHF_miRNA","PMID:23575307","GOC:bc","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA nucleotidylexotransferase activity (obsolete GO:1904939)","synonyms":[{"name":"regulation of TdT","type":"related"},{"name":"regulation of addase activity","type":"exact"},{"name":"regulation of deoxynucleotidyl terminal transferase activity","type":"exact"},{"name":"regulation of deoxyribonucleic acid nucleotidyltransferase activity","type":"exact"},{"name":"regulation of deoxyribonucleic nucleotidyltransferase activity","type":"exact"},{"name":"regulation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"exact"},{"name":"regulation of terminal addition enzyme activity","type":"related"},{"name":"regulation of terminal deoxynucleotide transferase activity","type":"exact"},{"name":"regulation of terminal deoxynucleotidyltransferase activity","type":"exact"},{"name":"regulation of terminal deoxyribonucleotidyltransferase activity","type":"exact"},{"name":"regulation of terminal transferase activity","type":"exact"}],"termid":"GO:1904939"}


id: PBO:0001629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-phospholipase A2 activity regulator (predicted)","termid":"PBO:0001629"}


id: PBO:0043443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 2 pseudogene 3","termid":"PBO:0043443"}


id: MONDO:0021950
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune oophoritis is a rare cause of primary ovarian insufficiency (POI). It happens when the body's immune system mistakenly attacks the ovaries causing inflammation, atrophy and fibrosis. These changes stop the ovaries from working normally. The main symptoms of autoimmune oophorotis are irregular or absent menstrual period (amenorrhea) and symptoms related to ovarian cysts such as abdominal cramping, bloating, nausea and vomiting. Autoimmune oophoritis may occur as part of autoimmune polyglandular syndrome type I and type II but has also been associated with lupus, pernicious anemia, myasthenia gravis and other autoimmune conditions. The underlying cause of autoimmune oophoritis is unknown. Diagnosis involves a special blood test which looks for anti-steroid or anti-ovarian antibodies, a pelvic ultrasound to look for enlarged cystic ovaries and tests to rule out other possible causes of POI. Management of autoimmune oophoritis involves emotional support, possible estrogen replacement therapy and management of other autoimmune conditions.","definition_xrefs":["GARD:0009461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of endocrine system","termid":"MONDO:0000569"},{"relation_name":"is_a","term_name":"oophoritis","termid":"MONDO:0006877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune oophoritis","secondary_identifiers":["UMLS:C0878654","MESH:C538274","MEDGEN:163900"],"termid":"MONDO:0021950","xrefs":{"Monarch":{"xref_id":"0021950"}}}


id: FYPO:0001248
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of the initiation of mitotic DNA replication is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal regulation of DNA replication initiation","termid":"FYPO:0004756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"abnormal regulation of mitotic DNA replication initiation","synonyms":[{"name":"abnormal regulation of DNA replication initiation during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of mitotic DNA replication initiation during vegetative growth","type":"exact"}],"termid":"FYPO:0001248"}


id: MONDO:0016811
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Renal tubulopathy - encephalopathy - liver failure describes a spectrum of phenotypes with manifestations similar but milder than those seen in Gracile syndrome and that can be associated with encephalopathy and psychiatric disorders.","definition_xrefs":["Orphanet:254902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex III deficiency nuclear type 1","termid":"MONDO:0007415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"renal tubulopathy-encephalopathy-liver failure syndrome","secondary_identifiers":["GARD:17231","UMLS:C4274075","MEDGEN:900319"],"termid":"MONDO:0016811","xrefs":{"Monarch":{"xref_id":"0016811"}}}


id: PBO:0075935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST20-MTHFS readthrough","termid":"PBO:0075935"}


id: PBO:0053412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 349","termid":"PBO:0053412"}


id: SO:0001329
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N2_2prime_O_dimethylguanosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N2_2_prime_O_dimethylguanosine","secondary_identifiers":["RNAMOD:034"],"synonyms":[{"name":"N2 2 prime O dimethylguanosine","type":"exact"},{"name":"N2,2'-O-dimethylguanosine","type":"exact"},{"name":"m2Gm","type":"exact"}],"termid":"SO:0001329"}


id: PBO:0053603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 635","termid":"PBO:0053603"}


id: PBO:0062943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferation-associated 2G4 pseudogene 1","termid":"PBO:0062943"}


id: GO:0150176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phosphatidylethanolamine metabolic process.","definition_xrefs":["GOC:bc","PMID:30074985","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatidylethanolamine metabolic process","termid":"GO:0150175"},{"relation_name":"is_a","term_name":"positive regulation of phospholipid metabolic process","termid":"GO:1903727"},{"relation_name":"positively_regulates","term_name":"phosphatidylethanolamine metabolic process","termid":"GO:0046337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphatidylethanolamine metabolic process","termid":"GO:0150176"}


id: FYPO:0002070
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell has a nucleus in the normal location at the midpoint of the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"},{"relation_name":"output_of","term_name":"normal nucleus positioning","termid":"FYPO:0001389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"normal nucleus location","synonyms":[{"name":"normal nuclear location","type":"exact"},{"name":"normal nucleus location during mitotic cell cycle","type":"related"},{"name":"normal nucleus location during vegetative growth","type":"exact"},{"name":"normal nucleus position","type":"exact"},{"name":"normally localized nucleus","type":"exact"}],"termid":"FYPO:0002070"}


id: MONDO:1012716
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any difference of sexual development that occurs in horses with a XY karyotype.","definition_xrefs":["OMIA:001601-9796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"difference of sexual differentiation, non-human animal","termid":"MONDO:0700105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XY difference of sexual development, horse","termid":"MONDO:1012716","xrefs":{"Monarch":{"xref_id":"1012716"}}}


id: MONDO:0007213
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ballard syndrome is characterized by hypoplasia of the distal phalanges of the ulnar side of the hand and shortening of one or more metacarpals. In contrast to brachydactyly type E, patients with Ballard syndrome have normal stature.","definition_xrefs":["Orphanet:93395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brachydactyly","termid":"MONDO:0021004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ballard syndrome","secondary_identifiers":["DOID:0110963","OMIM:112440","UMLS:C1862163","MESH:C537094","MEDGEN:349443","SCTID:722298001","icd11.foundation:94436217"],"synonyms":[{"name":"Ballard type brachydactyly","type":"exact"},{"name":"Pitt Williams brachydactyly","type":"related"},{"name":"Pitt-Williams brachydactyly","type":"exact"},{"name":"brachydactyly Ballard type","type":"related"},{"name":"brachydactyly combined B and E types","type":"related"},{"name":"brachydactyly types B and E combined","type":"exact"},{"name":"brachydactyly, Ballard type","type":"related"},{"name":"brachydactyly, combined B and E types","type":"related"}],"termid":"MONDO:0007213","xrefs":{"Monarch":{"xref_id":"0007213"}}}


id: GO:0002492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of a peptide antigen to the antigen binding groove of an MHC class Ib protein complex. Class Ib here refers to non-classical class I molecules, such as those of the HLA-E gene family.","definition_xrefs":["GOC:add","PMID:15928678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide antigen assembly with MHC protein complex","termid":"GO:0002501"},{"relation_name":"part_of","term_name":"MHC class Ib protein complex assembly","termid":"GO:0002398"},{"relation_name":"part_of","term_name":"antigen processing and presentation of peptide antigen via MHC class Ib","termid":"GO:0002428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"peptide antigen assembly with MHC class Ib protein complex","termid":"GO:0002492"}


id: MONDO:0020310
data:
  {"annotated_genes":["SJAG_00824","SJAG_02765","SJAG_01184"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024556"},{"annotations":[88951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014924"},{"annotations":[88950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014925"}]},"cv_name":"mondo","definition":"Familial focal epilepsy with variable foci is a rare genetic epilepsy disorder characterized by autosomal dominant lesional and nonlesional focal epilepsy with variable penetrance. Focal seizures emanate from different cortical locations (temporal, frontal, centroparietal, parietal, parietaloccipital, occipital) in different family members, but for each individual a single focus remains constant throughout lifetime. Seizure type (tonic, tonic-clonic or hyperkinetic) and severity varies among family members and tends to decrease (but do not disappear) during adulthood. Many patients have an aura and show automatisms during diurnal seizures whereas others have nocturnal seizures. Most individuals are of normal intelligence but patients with intellectual disability, autistic spectrum disorder and obsessive-compulsive disorder have been described.","definition_xrefs":["Orphanet:98820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial partial epilepsy","termid":"MONDO:0017704"},{"relation_name":"is_a","term_name":"variable-age onset focal epilepsy syndrome","termid":"MONDO:0800492"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00824":null,"SJAG_01184":null,"SJAG_02765":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"familial focal epilepsy with variable foci","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:764522009","GARD:13295","icd11.foundation:855404450","MEDGEN:348951","UMLS:C1858477","OMIMPS:604364","MESH:C565785","DOID:0081420"],"synonyms":[{"name":"FFEVF","type":"exact"},{"name":"epilepsy, familial focal, with variable foci","type":"exact"},{"name":"familial focal epilepsy with variable foci","type":"exact"},{"name":"familial partial epilepsy with variable foci","type":"exact"}],"termid":"MONDO:0020310","terms_by_termid":{"MONDO:0014924":null,"MONDO:0014925":null,"MONDO:0024556":null},"xrefs":{"Monarch":{"xref_id":"0020310"}}}


id: PBO:0068769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 6, pseudogene","termid":"PBO:0068769"}


id: MOD:01266
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["PubMed:15549660","Unimod:271#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleophilic addition to cytopiloyne+H2O","termid":"MOD:00591"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"nucleophilic addition to cytopiloyne+H2O - site C","synonyms":[{"name":"Cytopiloyne+water","type":"related"},{"name":"nucleophilic addition to cytopiloyne+H2O","type":"related"}],"termid":"MOD:01266"}


id: GO:0022850
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a cation by a channel that opens when serotonin has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mtg_transport","PMID:12867984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmitter-gated monoatomic ion channel activity","termid":"GO:0022824"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"},{"relation_name":"is_a","term_name":"serotonin receptor activity","termid":"GO:0099589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857","GO:0038023"],"is_obsolete":false,"name":"serotonin-gated monoatomic cation channel activity","secondary_identifiers":["Reactome:R-HSA-9648983","Reactome:R-HSA-975311","GO:0005232"],"synonyms":[{"name":"5-hydroxytryptamine-gated receptor-channel","type":"narrow"},{"name":"serotonin-activated cation-selective channel activity","type":"exact"},{"name":"serotonin-gated cation channel activity","type":"narrow"},{"name":"serotonin-gated cation-selective channel activity","type":"broad"},{"name":"serotonin-gated monoatomic cation-selective channel activity","type":"exact"}],"termid":"GO:0022850"}


id: FYPO:0004244
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is decreased during S phase of the mitotic cell cycle during a cellular response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity during mitotic S phase","termid":"FYPO:0004242"},{"relation_name":"is_a","term_name":"decreased protein kinase activity during cellular response to DNA damage","termid":"FYPO:0004243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"decreased protein kinase activity during mitotic S phase during cellular response to DNA damage","synonyms":[{"name":"decreased protein kinase activity during mitotic S phase in response to DNA damage","type":"related"},{"name":"reduced protein kinase activity during mitotic S phase during cellular response to DNA damage","type":"exact"}],"termid":"FYPO:0004244"}


id: MOD:01585
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-serine residue and a glycine residue by an ester bond to form O-glycyl-L-serine.","definition_xrefs":["RESID:AA0495","PubMed:17502423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ester crosslinked residues","termid":"MOD:00885"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-[(aminoacetyl)oxy]propanoic acid","type":"exact"},{"name":"CROSSLNK Glycyl serine ester (Gly-Ser) (interchain with S-...)","type":"exact"},{"name":"CROSSLNK Glycyl serine ester (Ser-Gly) (interchain with G-...)","type":"exact"},{"name":"O-(glycyl)-L-serine","type":"exact"},{"name":"O3-(aminoacetyl)serine","type":"exact"},{"name":"serine glycinate ester","type":"exact"}],"termid":"MOD:01585"}


id: MONDO:0030693
data:
  {"annotated_genes":["SJAG_00198"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88949],"is_not":false,"summary":null,"term":"MONDO:0030693"}]},"cv_name":"mondo","definition":"An autosomal recessive disorder characterized by onset of recurrent, usually viral, respiratory infections in infancy or early childhood. Other infections, including gastrointestinal and urinary tract infections, may also occur. Laboratory studies show hypogammaglobulinemia, lymphopenia with increased gamma/delta T cells, and erythrocyte macrocytosis. The disorder results from defective cellular DNA repair.","definition_xrefs":["OMIM:619774"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00198":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 96","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1810465","UMLS:C5676930"],"synonyms":[{"name":"IMD96","type":"exact"},{"name":"immunodeficiency 96","type":"exact"},{"name":"immunodeficiency, autosomal recessive due to LIG1 deficiency","type":"exact"}],"termid":"MONDO:0030693","terms_by_termid":{"MONDO:0030693":null},"xrefs":{"Monarch":{"xref_id":"0030693"}}}


id: GO:0045738
data:
  {"annotated_genes":["SJAG_03048","SJAG_00573"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001033"},{"annotations":[113612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904332"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of DNA repair.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA repair","termid":"GO:0006282"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"negative regulation of DNA metabolic process","termid":"GO:0051053"},{"relation_name":"negatively_regulates","term_name":"DNA repair","termid":"GO:0006281"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00573":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"negatively_regulates","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA repair","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of DNA repair","type":"exact"},{"name":"down-regulation of DNA repair","type":"exact"},{"name":"downregulation of DNA repair","type":"exact"},{"name":"inhibition of DNA repair","type":"narrow"}],"termid":"GO:0045738","terms_by_termid":{"GO:1904332":null,"GO:2001033":null}}


id: SO:0001448
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polar, hydorophilic amino acid encoded by the codons CAA and CAG. ","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine","synonyms":[{"name":"Gln","type":"exact"},{"name":"Q","type":"exact"}],"termid":"SO:0001448"}


id: GO:0021692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the cerebellar Purkinje cell layer is generated and organized. The Purkinje cell layer lies just underneath the molecular layer of the cerebellar cortex. It contains the neuronal cell bodies of the Purkinje cells that are arranged side by side in a single layer. Candelabrum interneurons are vertically oriented between the Purkinje cells. Purkinje neurons are inhibitory and provide the output of the cerebellar cortex through axons that project into the white matter. Extensive dendritic trees from the Purkinje cells extend upward in a single plane into the molecular layer where they synapse with parallel fibers of granule cells.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:cls","GOC:jid","ISBN:0838580343","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"cerebellar Purkinje cell layer development","termid":"GO:0021680"},{"relation_name":"part_of","term_name":"cerebellar cortex morphogenesis","termid":"GO:0021696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar Purkinje cell layer morphogenesis","termid":"GO:0021692"}


id: PBO:0053580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 603","termid":"PBO:0053580"}


id: MONDO:0018096
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Weill-Marchesani syndrome (WMS) is a rare condition characterized by short stature, brachydactyly, joint stiffness, and characteristic eye abnormalities including microspherophakia, ectopia of the lens, severe myopia, and glaucoma.","definition_xrefs":["Orphanet:3449"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome with brachydactyly (obsolete MONDO:0019066)","termid":"MONDO:0019066"},{"relation_name":"excluded_subClassOf","term_name":"obsolete lens size anomaly (obsolete MONDO:0020235)","termid":"MONDO:0020235"},{"relation_name":"is_a","term_name":"autosomal genetic disease","termid":"MONDO:0000429"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"acromelic dysplasia","termid":"MONDO:0019695"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Weill-Marchesani syndrome","secondary_identifiers":["SCTID:2884008","MEDGEN:82705","UMLS:C0265313","DOID:0050475","GARD:4936","NCIT:C85226","MESH:D056846","MedDRA:10064963","NORD:1842","OMIMPS:277600","ICD9:759.89"],"synonyms":[{"name":"Marchesani-Weill syndrome","type":"exact"},{"name":"WM syndrome","type":"related"},{"name":"WMS","type":"related"},{"name":"Weill Marchesani Syndrome","type":"exact"},{"name":"congenital mesodermal dystrophy","type":"exact"},{"name":"mesodermal Dysmorphodystrophy, congenital","type":"exact"},{"name":"mesodermal dysmorphodystrophy congenital","type":"related"},{"name":"spherophakia brachymorphia syndrome","type":"exact"},{"name":"spherophakia-brachymorphia syndrome","type":"exact"}],"termid":"MONDO:0018096","xrefs":{"Monarch":{"xref_id":"0018096"}}}


id: GO:0002031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the uptake of a G protein-coupled receptor into an endocytic vesicle.","definition_xrefs":["PMID:8396717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor internalization","termid":"GO:0031623"},{"relation_name":"part_of","term_name":"desensitization of G protein-coupled receptor signaling pathway","termid":"GO:0002029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0016192"],"is_obsolete":false,"name":"G protein-coupled receptor internalization","synonyms":[{"name":"G-protein coupled receptor internalization","type":"exact"}],"termid":"GO:0002031"}


id: MONDO:1011245
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinal degeneration that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal degeneration, non-human animal","termid":"MONDO:1010326"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal degeneration, domestic cat","secondary_identifiers":["OMIA:000866-9685"],"termid":"MONDO:1011245","xrefs":{"Monarch":{"xref_id":"1011245"}}}


id: GO:0016034
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-maleylacetoacetate = 4-fumarylacetoacetate.","definition_xrefs":["EC:5.2.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis-trans isomerase activity","termid":"GO:0016859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"maleylacetoacetate isomerase activity","secondary_identifiers":["MetaCyc:MALEYLACETOACETATE-ISOMERASE-RXN","RHEA:14817","UM-BBD_reactionID:r0106","GO:0018841","Reactome:R-HSA-71173"],"synonyms":[{"name":"4-maleylacetoacetate cis-trans-isomerase activity","type":"related"},{"name":"maleylacetoacetic isomerase activity","type":"related"},{"name":"maleylacetone cis-trans-isomerase activity","type":"related"},{"name":"maleylacetone isomerase activity","type":"related"}],"termid":"GO:0016034"}


id: MONDO:0001744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The sudden increase of intraocular pressure, resulting in pain and an abrupt decrease in visual acuity.","definition_xrefs":["NCIT:C34639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glaucoma","termid":"MONDO:0005041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"angle-closure glaucoma","secondary_identifiers":["DOID:13550","SCTID:392291006","MEDGEN:6610","UMLS:C0017605","MESH:D015812"],"synonyms":[{"name":"ACG - angle-closure glaucoma","type":"exact"},{"name":"Narrow cleft glaucoma","type":"exact"},{"name":"angle closure glaucoma","type":"exact"},{"name":"primary open-angle glaucoma with narrow angles","type":"exact"}],"termid":"MONDO:0001744","xrefs":{"Monarch":{"xref_id":"0001744"}}}


id: GO:0035612
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an AP-2 adaptor complex. The AP-2 adaptor complex is a heterotetrameric AP-type membrane coat adaptor complex that consists of alpha, beta2, mu2 and sigma2 subunits and links clathrin to the membrane surface of a vesicle. In at least humans, the AP-2 complex can be heterogeneric due to the existence of multiple subunit isoforms encoded by different alpha genes (alphaA and alphaC).","definition_xrefs":["PMID:12221107","PMID:15728179","GOC:BHF","PMID:21097499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"AP-2 adaptor complex binding","synonyms":[{"name":"AP-2 clathrin adaptor complex binding","type":"related"}],"termid":"GO:0035612"}


id: FYPO:0000354
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006433"},{"annotations":[121255,121246,121244,121258,121243],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001784"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the endoplasmic reticulum is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endomembrane system morphology","termid":"FYPO:0000353"},{"relation_name":"output_of","term_name":"abnormal endoplasmic reticulum organization","termid":"FYPO:0000805"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00426":null,"SJAG_01906":null,"SJAG_02763":null,"SJAG_03940":null},"genotype_count":6,"genotypes_by_uniquename":{"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]},"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal endoplasmic reticulum morphology","references_by_uniquename":{"PMID:25318672":null,"PMID:26774782":null},"single_locus_annotated_genes":["SJAG_01906","SJAG_03940","SJAG_00426","SJAG_02763"],"single_locus_genotype_uniquenames":["bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","nem2delta","ned1delta","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","nem1delta","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal ER morphology","type":"exact"},{"name":"abnormal endoplasmic reticulum morphology during mitotic cell cycle","type":"related"},{"name":"abnormal endoplasmic reticulum morphology during vegetative growth","type":"exact"},{"name":"endoplasmic reticulum morphology: abnormal","type":"related"}],"termid":"FYPO:0000354","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000162":null,"FYPO:0001784":null,"FYPO:0006433":null,"FYPO_EXT:0000001":null}}


id: PR:P87235
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rhp42 gene.","definition_xrefs":["UniProtKB:P87235","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rhp42 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.10c","synonyms":[{"name":"Spom972h-rhp42","type":"exact"}],"termid":"PR:P87235"}


id: GO:0043161
data:
  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id: PBO:0059648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 14","termid":"PBO:0059648"}


id: GO:1903609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of inward rectifier potassium channel activity.","definition_xrefs":["GOC:rl","PMID:18923542","GO_REF:0000059","GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of voltage-gated potassium channel activity","termid":"GO:1903817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of inward rectifier potassium channel activity","synonyms":[{"name":"down regulation of Kir channel activity","type":"exact"},{"name":"down regulation of inward rectifier potassium channel activity","type":"exact"},{"name":"down-regulation of Kir channel activity","type":"exact"},{"name":"down-regulation of inward rectifier potassium channel activity","type":"exact"},{"name":"downregulation of Kir channel activity","type":"exact"},{"name":"downregulation of inward rectifier potassium channel activity","type":"exact"},{"name":"inhibition of Kir channel activity","type":"narrow"},{"name":"inhibition of inward rectifier potassium channel activity","type":"narrow"},{"name":"negative regulation of Kir channel activity","type":"exact"}],"termid":"GO:1903609"}


id: PBO:0057941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3666","termid":"PBO:0057941"}


id: PBO:0075649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPRY domain containing 4","termid":"PBO:0075649"}


id: MONDO:0859357
data:
  {"annotated_genes":["SJAG_01940"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87339],"is_not":false,"summary":null,"term":"MONDO:0859357"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type II","termid":"MONDO:0005501"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01940":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"congenital disorder of glycosylation, type IIz","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5774295","MEDGEN:1824068","OMIM:620201"],"termid":"MONDO:0859357","terms_by_termid":{"MONDO:0859357":null},"xrefs":{"Monarch":{"xref_id":"0859357"}}}


id: MONDO:0003769
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gastritis resulting from herpes virus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral gastritis","termid":"MONDO:0002270"},{"relation_name":"is_a","term_name":"Herpesviridae infectious disease","termid":"MONDO:0005794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"herpetic gastritis","secondary_identifiers":["DOID:6102","UMLS:C1333996","MEDGEN:272714","NCIT:C27341"],"synonyms":[{"name":"Herpesviridae caused viral gastritis","type":"exact"},{"name":"Herpesviridae viral gastritis","type":"exact"}],"termid":"MONDO:0003769","xrefs":{"Monarch":{"xref_id":"0003769"}}}


id: PBO:0064102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi like RNA-mediated gene silencing 3","termid":"PBO:0064102"}


id: GO:0045632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of mechanoreceptor differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mechanoreceptor differentiation","termid":"GO:0045631"},{"relation_name":"is_a","term_name":"negative regulation of neuron differentiation","termid":"GO:0045665"},{"relation_name":"negatively_regulates","term_name":"mechanoreceptor differentiation","termid":"GO:0042490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mechanoreceptor differentiation","synonyms":[{"name":"down regulation of mechanoreceptor differentiation","type":"exact"},{"name":"down-regulation of mechanoreceptor differentiation","type":"exact"},{"name":"downregulation of mechanoreceptor differentiation","type":"exact"},{"name":"inhibition of mechanoreceptor differentiation","type":"narrow"}],"termid":"GO:0045632"}


id: GO:0061277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a mesonephric nephron tubule from unspecified parts. A mesonephric nephron tubule is an epithelial tube that is part of a nephron in the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric tubule formation","termid":"GO:0072172"},{"relation_name":"part_of","term_name":"mesonephric nephron tubule morphogenesis","termid":"GO:0061240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric nephron tubule formation","termid":"GO:0061277"}


id: MOD:01949
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links a phenylalanine and two tyrosine residues to form coelenterazine.","definition_xrefs":["ChEBI:2311","PubMed:11572972","PubMed:10830969","PubMed:19833098","RESID:AA0595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"},{"relation_name":"is_a","term_name":"crosslinked L-phenylalanine residue","termid":"MOD:02053"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coelenterazine","synonyms":[{"name":"8-benzyl-2-(4-hydroxybenzyl)-6-(4-hydroxyphenyl)imidazo[1,2-a]pyrazin-3(7H)-one","type":"exact"},{"name":"Oplophorus luciferin","type":"exact"},{"name":"coelenterazine","type":"exact"}],"termid":"MOD:01949"}


id: PBO:0074203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC39A12 antisense RNA 1","termid":"PBO:0074203"}


id: PBO:0073063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndecan 1","termid":"PBO:0073063"}


id: PBO:0016921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein Mug116","termid":"PBO:0016921"}


id: FYPO:0007310
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 12 of histone H4 in centromere outer repeat regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4-K12 acetylation at centromere during vegetative growth","termid":"FYPO:0007306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0001985","FYPO:0002494","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased histone H4-K12 acetylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"increased histone H4-K12 acetylation at centromere otr during vegetative growth","type":"exact"},{"name":"increased histone H4-K12 acetylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H4-K12 acetylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"increased histone H4-K12 acetylation at pericentric region during vegetative growth","type":"related"},{"name":"increased histone H4-K12 acetylation at pericentromeric region during vegetative growth","type":"related"},{"name":"increased histone H4K12 acetylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0007310"}


id: GO:0071836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of a nectar by a cell or a tissue. Nectar is a fluid secreted by many angiosperms to promote pollination by providing a reward to pollinators. Nectar may also deter certain organisms from visiting or play other biological roles. Nectar is a complex solution that may include the following types of compounds: sugars, amino acids, organic acids, alkaloids, flavonoids, glycosides, vitamins, phenolics, metal ions, oils, free fatty acids, and proteins.","definition_xrefs":["PMID:19861655","GOC:kad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretion","termid":"GO:0046903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"nectar secretion","synonyms":[{"name":"nectar production","type":"related"}],"termid":"GO:0071836"}


id: GO:0046656
data:
  {"annotated_genes":["SJAG_00106","SJAG_03275","SJAG_02225","SJAG_01126","SJAG_04156","SJAG_02408","SJAG_00815"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57219,61278,70635,106616,107913,110187,114268],"is_not":false,"summary":null,"term":"GO:0046656"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of folic acid, pteroylglutamic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid-containing compound biosynthetic process","termid":"GO:0009396"},{"relation_name":"is_a","term_name":"water-soluble vitamin biosynthetic process","termid":"GO:0042364"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"},{"relation_name":"is_a","term_name":"folic acid metabolic process","termid":"GO:0046655"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00815":null,"SJAG_01126":null,"SJAG_02225":null,"SJAG_02408":null,"SJAG_03275":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0042559"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0042559","GO:0044281","GO:0008150","GO:0006766"],"is_obsolete":false,"name":"folic acid biosynthetic process","references_by_uniquename":{"GO_REF:0000043":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Folic_acid"],"synonyms":[{"name":"folate biosynthesis","type":"exact"},{"name":"folate biosynthetic process","type":"exact"},{"name":"folic acid anabolism","type":"exact"},{"name":"folic acid biosynthesis","type":"exact"},{"name":"folic acid formation","type":"exact"},{"name":"folic acid synthesis","type":"exact"},{"name":"vitamin B9 biosynthesis","type":"exact"},{"name":"vitamin B9 biosynthetic process","type":"exact"},{"name":"vitamin M biosynthesis","type":"exact"},{"name":"vitamin M biosynthetic process","type":"exact"}],"termid":"GO:0046656","terms_by_termid":{"GO:0046656":null}}


id: GO:0102783
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: beta-carotene + 2 O2 = 2 beta-ionone + 4,9-dimethyldodeca-2,4,6,8,10-pentaenedial.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-carotene oxygenase activity (obsolete GO:0102783)","termid":"GO:0102783"}


id: PBO:0085547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; required for assembly and maturation of pre-40 S particles; homologous to mammalian ribosomal protein S19, no bacterial homolog; mutations in human RPS19 are associated with Diamond Blackfan anemia; RPS19B has a paralog, RPS19A, that arose from the whole genome duplication","termid":"PBO:0085547"}


id: PBO:0054429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1825","termid":"PBO:0054429"}


id: GO:0140439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a stearoyl (systematic name, octadecanoyl) group to a sulfur atom on the cysteine of a protein molecule, in the reaction: octadecanoyl-CoA + L-cysteinyl-[protein] = CoA + S-octadecanoyl-L-cysteinyl-[protein].","definition_xrefs":["PMID:22968831","RHEA:59740","PMID:12681491","PMID:22247542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-cysteine S-acyltransferase activity","termid":"GO:0019707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"protein-cysteine S-stearoyltransferase activity","termid":"GO:0140439"}


id: PBO:0079116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA splicing endonuclease subunit 34","termid":"PBO:0079116"}


id: MONDO:0009815
data:
  {"annotated_genes":["SJAG_00516"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88183],"is_not":false,"summary":null,"term":"MONDO:0009815"}]},"cv_name":"mondo","definition":"Any autosomal recessive malignant osteopetrosis in which the cause of the disease is a mutation in the TCIRG1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive osteopetrosis","termid":"MONDO:0019026"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005328"],"is_obsolete":false,"name":"autosomal recessive osteopetrosis 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C167215","OMIM:259700","GARD:2579","UMLS:C1850127","DOID:0110942","MESH:C564915","MEDGEN:376708"],"synonyms":[{"name":"Albers-Schonberg disease, autosomal recessive","type":"related"},{"name":"OPTB1","type":"exact"},{"name":"TCIRG1 autosomal recessive malignant osteopetrosis","type":"exact"},{"name":"TCIRG1 autosomal recessive osteopetrosis","type":"exact"},{"name":"autosomal recessive Albers-Schonberg disease","type":"exact"},{"name":"autosomal recessive malignant osteopetrosis caused by mutation in TCIRG1","type":"exact"},{"name":"autosomal recessive osteopetrosis 1","type":"exact"},{"name":"autosomal recessive osteopetrosis caused by mutation in TCIRG1","type":"exact"},{"name":"autosomal recessive osteopetrosis type 1","type":"exact"},{"name":"infantile malignant osteopetrosis 1","type":"exact"},{"name":"marble bones autosomal recessive","type":"related"},{"name":"marble bones, autosomal recessive","type":"related"},{"name":"osteopetrosis autosomal recessive 1","type":"related"},{"name":"osteopetrosis infantile malignant 1","type":"related"},{"name":"osteopetrosis, autosomal recessive 1","type":"related"},{"name":"osteopetrosis, autosomal recessive type 1","type":"exact"},{"name":"osteopetrosis, infantile malignant 1","type":"related"}],"termid":"MONDO:0009815","terms_by_termid":{"MONDO:0009815":null},"xrefs":{"Monarch":{"xref_id":"0009815"}}}


id: GO:0019452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-cysteine into other compounds, including taurine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cysteine catabolic process","termid":"GO:0019448"},{"relation_name":"is_a","term_name":"taurine metabolic process","termid":"GO:0019530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520","GO:0006790"],"is_obsolete":false,"name":"L-cysteine catabolic process to taurine","synonyms":[{"name":"L-cysteine breakdown to taurine","type":"exact"},{"name":"L-cysteine degradation to taurine","type":"exact"}],"termid":"GO:0019452"}


id: MONDO:0017661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare parkinsonian syndrome due to genetic neurodegenerative disease (obsolete MONDO:0017661)","secondary_identifiers":["Orphanet:307055"],"termid":"MONDO:0017661","xrefs":{"Monarch":{"xref_id":"0017661"}}}


id: MONDO:0000192
data:
  {"annotated_genes":["SJAG_03150","SJAG_03149"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88521,88522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014526"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopathy","termid":"MONDO:0005336"},{"relation_name":"is_a","term_name":"hereditary skeletal muscle disorder","termid":"MONDO:0700223"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03149":null,"SJAG_03150":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"polyglucosan body myopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:615895"],"termid":"MONDO:0000192","terms_by_termid":{"MONDO:0014526":null},"xrefs":{"Monarch":{"xref_id":"0000192"}}}


id: PR:O74855
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A notchless protein homolog 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04884","PANTHER:PTHR19848:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome assembly protein 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.05c","secondary_identifiers":["UniProtKB:O74855"],"synonyms":[{"name":"Spom972h-NLE1","type":"exact"},{"name":"notchless protein homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ribosome biogenesis factor rsa4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74855"}


id: PBO:0113067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the TOM (translocase of outer membrane) complex; involved in the recognition and initial import steps for all mitochondrially-directed proteins, acting as a receptor for incoming precursor proteins; moonlighting role as a transcriptional regulator of mitochondrial proteins; age-dependent reduction in Tom70p results in mitochondrial dysfunction, a hallmark of aging; localizes to mitochondria–ER contact sites; TOM70 has a paralog, TOM71, that arose from the whole genome duplication","termid":"PBO:0113067"}


id: GO:0030841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intermediate filament polymerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intermediate filament polymerization","termid":"GO:0030839"},{"relation_name":"is_a","term_name":"positive regulation of protein polymerization","termid":"GO:0032273"},{"relation_name":"is_a","term_name":"positive regulation of cytoskeleton organization","termid":"GO:0051495"},{"relation_name":"positively_regulates","term_name":"intermediate filament polymerization","termid":"GO:0045107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0007010","GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of intermediate filament polymerization","synonyms":[{"name":"activation of intermediate filament polymerization","type":"narrow"},{"name":"positive regulation of intermediate filament polymerization and/or depolymerization","type":"broad"},{"name":"stimulation of intermediate filament polymerization","type":"narrow"},{"name":"up regulation of intermediate filament polymerization","type":"exact"},{"name":"up-regulation of intermediate filament polymerization","type":"exact"},{"name":"upregulation of intermediate filament polymerization","type":"exact"}],"termid":"GO:0030841"}


id: MONDO:0009732
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital nephrotic syndrome, Finnish type is characterized by protein loss beginning during fetal life.","definition_xrefs":["Orphanet:839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial nephrotic syndrome","termid":"MONDO:0002350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"congenital nephrotic syndrome, Finnish type","secondary_identifiers":["OMIM:256300","MEDGEN:98011","GARD:1500","SCTID:197601003","UMLS:C0403399","NCIT:C122795","NANDO:2200110","DOID:0080390","MedDRA:10060740"],"synonyms":[{"name":"CnF","type":"related"},{"name":"Finnish congenital nephrosis","type":"exact"},{"name":"NPHS1","type":"related"},{"name":"congenital nephrotic syndrome - Finnish type","type":"exact"},{"name":"congenital nephrotic syndrome 1","type":"related"},{"name":"congenital nephrotic syndrome Finnish type","type":"related"},{"name":"congenital nephrotic syndrome, Finnish type","type":"exact"},{"name":"nephrosis 1, congenital, Finnish type","type":"related"},{"name":"nephrosis, congenital","type":"related"},{"name":"nephrotic syndrome - NPHS1 associated","type":"exact"},{"name":"nephrotic syndrome, congenital","type":"related"},{"name":"nephrotic syndrome, type 1","type":"related"}],"termid":"MONDO:0009732","xrefs":{"Monarch":{"xref_id":"0009732"}}}


id: PR:O43125
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lsb1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein csh3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.05c","synonyms":[{"name":"Spom972h-lsb1","type":"exact"}],"termid":"PR:O43125"}


id: MONDO:0001294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Horner's syndrome is a rare condition characterized by miosis (constriction of thepupil), ptosis (drooping of the upper eyelid), and anhidrosis (absence of sweating of the face). It iscaused by damage to the sympathetic nerves of the face. The underlying causes of Horner's syndrome vary greatly and may include a tumor, stroke, or other damage to a part of the brain called the brain stem ; injury to the carotid artery ;and trauma to the brachial plexus. In rare cases, Horner's syndrome is congenital (present from birth) and associated with a lack of pigmentation of the iris (colored part of the eye). Treatment of Horner's syndrome depends on the underlying cause.","direct_ancestors":[{"relation_name":"is_a","term_name":"autonomic neuropathy","termid":"MONDO:0001300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Horner syndrome","secondary_identifiers":["NCIT:C28155","icd11.foundation:178756462","ICD10CM:G90.2","MEDGEN:5616","SCTID:192915005","UMLS:C0019937","ICD9:337.09","MESH:D006732","DOID:11486"],"synonyms":[{"name":"Bernard Horner syndrome","type":"exact"},{"name":"Bernard-Horner syndrome","type":"related"},{"name":"Horner syndrome","type":"exact"},{"name":"Horner's syndrome","type":"exact"},{"name":"cervical sympathetic paralysis","type":"exact"},{"name":"oculosympathetic palsy","type":"related"}],"termid":"MONDO:0001294","xrefs":{"Monarch":{"xref_id":"0001294"}}}


id: PBO:0069379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 639, pseudogene","termid":"PBO:0069379"}


id: GO:1905086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of bioluminescence.","definition_xrefs":["PMID:10913092","GO_REF:0000058","GOC:BHF","GOC:rph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of bioluminescence","termid":"GO:1905085"},{"relation_name":"negatively_regulates","term_name":"bioluminescence","termid":"GO:0008218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of bioluminescence","synonyms":[{"name":"down regulation of bioluminescence","type":"exact"},{"name":"down-regulation of bioluminescence","type":"exact"},{"name":"downregulation of bioluminescence","type":"exact"},{"name":"inhibition of bioluminescence","type":"narrow"}],"termid":"GO:1905086"}


id: PBO:0028435
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_superoxide_dismutase_activity","termid":"PBO:0028435"}


id: PBO:0044825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 112","termid":"PBO:0044825"}


id: PBO:0080847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 2","termid":"PBO:0080847"}


id: GO:0031843
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2 neuropeptide Y receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide Y receptor binding","termid":"GO:0031841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"type 2 neuropeptide Y receptor binding","synonyms":[{"name":"type 2 neuropeptide Y receptor ligand","type":"narrow"}],"termid":"GO:0031843"}


id: PBO:0054578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1980","termid":"PBO:0054578"}


id: GO:0030304
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Stops, prevents or reduces the activity of the serine endopeptidase trypsin.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete trypsin inhibitor activity (obsolete GO:0030304)","synonyms":[{"name":"trypsin inhibitor activity","type":"exact"}],"termid":"GO:0030304"}


id: GO:1900387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A negative regulation of transcription from RNA polymerase II promoter that results in negative regulation of cell-cell adhesion.","definition_xrefs":["GOC:BHF","GOC:TermGenie","PMID:15737616"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cell-cell adhesion by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900387)","termid":"GO:1900387"}


id: PBO:0067533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 677, pseudogene","termid":"PBO:0067533"}


id: GO:0120205
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The proximal region of the photoreceptor connecting cilium is similar to the transition zone of unspecialized primary cilia and houses several major transition zone complexes, including NPHP, MKS, and RPGR.","definition_xrefs":["GOC:krc","PMID:29899041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"photoreceptor connecting cilium","termid":"GO:0032391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"photoreceptor proximal connecting cilium","synonyms":[{"name":"PCC","type":"related"},{"name":"photoreceptor PCC","type":"related"}],"termid":"GO:0120205"}


id: PBO:0061738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurexophilin and PC-esterase domain family member 2","termid":"PBO:0061738"}


id: PBO:0062231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily B member 10 pseudogene","termid":"PBO:0062231"}


id: GO:0031164
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding the contractile vacuole.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar membrane","termid":"GO:0005774"},{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"part_of","term_name":"contractile vacuole","termid":"GO:0000331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410","GO:0005773"],"is_obsolete":false,"name":"contractile vacuolar membrane","synonyms":[{"name":"contractile vacuole membrane","type":"exact"}],"termid":"GO:0031164"}


id: GO:0014863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a inactivity stimulus is received by a cell or organism and converted into a molecular signal.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to inactivity","termid":"GO:0014854"},{"relation_name":"is_a","term_name":"detection of stimulus","termid":"GO:0051606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of inactivity","termid":"GO:0014863"}


id: MONDO:0012829
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease that has material basis in variation in the chromosome region 3p21.3","definition_xrefs":["PMID:17804789","DOID:0110887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"inflammatory bowel disease 12","secondary_identifiers":["MEDGEN:436861","MESH:C567388","OMIM:612241","UMLS:C2677105"],"synonyms":[{"name":"IBD12","type":"exact"},{"name":"inflammatory bowel disease 12","type":"exact"},{"name":"inflammatory bowel disease type 12","type":"exact"}],"termid":"MONDO:0012829","xrefs":{"Monarch":{"xref_id":"0012829"}}}


id: PBO:0046339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 4","termid":"PBO:0046339"}


id: PBO:0069181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 435, pseudogene","termid":"PBO:0069181"}


id: GO:0140010
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of D-aspartate from one side of a membrane to the other.","definition_xrefs":["PMID:7914198","GO_REF:0000070"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"},{"relation_name":"is_a","term_name":"C4-dicarboxylate transmembrane transporter activity","termid":"GO:0015556"},{"relation_name":"is_a","term_name":"D-amino acid transmembrane transporter activity","termid":"GO:0042943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"D-aspartate transmembrane transporter activity","termid":"GO:0140010"}


id: PR:Q10057
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein disulfide-isomerase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00106","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide-isomerase C1F5.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F5.02","secondary_identifiers":["UniProtKB:Q10057"],"synonyms":[{"name":"Spom972h-P4HB","type":"exact"}],"termid":"PR:Q10057"}


id: FYPO:0007975
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed during anaphase B in which the distribution of the positions of interpolar microtubule rescues is abnormal.\\nThe positions of interpolar microtubule rescues are where the transitions from shrinkage to growth occur.","definition_xrefs":["PMID:35293864","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule rescue","termid":"FYPO:0007957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000054","FYPO:0001985"],"is_obsolete":false,"name":"abnormal distribution of interpolar microtubule rescue during anaphase B","termid":"FYPO:0007975"}


id: GO:0048800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the antenna are generated and organized.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"is_a","term_name":"appendage morphogenesis","termid":"GO:0035107"},{"relation_name":"part_of","term_name":"eye-antennal disc morphogenesis","termid":"GO:0007455"},{"relation_name":"part_of","term_name":"antennal development","termid":"GO:0007469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antennal morphogenesis","termid":"GO:0048800"}


id: GO:1903117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of actin filament organization involved in cytokinetic actomyosin contractile ring assembly.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24798735"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of actin filament organization involved in cytokinetic actomyosin contractile ring assembly (obsolete GO:1903117)","synonyms":[{"name":"regulation of actin filament organisation of constriction ring assembly","type":"related"},{"name":"regulation of actin filament organisation of contractile ring assembly","type":"exact"},{"name":"regulation of actin filament organisation of cytokinesis, actomyosin contractile ring assembly","type":"exact"},{"name":"regulation of actin filament organisation of cytokinesis, actomyosin contractile ring formation","type":"related"},{"name":"regulation of actin filament organisation of cytokinesis, actomyosin ring biosynthesis","type":"related"},{"name":"regulation of actin filament organisation of cytokinesis, actomyosin ring formation","type":"related"},{"name":"regulation of actin filament organisation of cytokinesis, contractile ring assembly","type":"related"},{"name":"regulation of actin filament organization of constriction ring assembly","type":"related"},{"name":"regulation of actin filament organization of contractile ring assembly","type":"exact"},{"name":"regulation of actin filament organization of cytokinesis, actomyosin contractile ring assembly","type":"exact"},{"name":"regulation of actin filament organization of cytokinesis, actomyosin contractile ring formation","type":"related"},{"name":"regulation of actin filament organization of cytokinesis, actomyosin ring biosynthesis","type":"related"},{"name":"regulation of actin filament organization of cytokinesis, actomyosin ring formation","type":"related"},{"name":"regulation of actin filament organization of cytokinesis, contractile ring assembly","type":"related"},{"name":"regulation of regulation of actin filament localization of constriction ring assembly","type":"related"},{"name":"regulation of regulation of actin filament localization of contractile ring assembly","type":"related"},{"name":"regulation of regulation of actin filament localization of cytokinesis, actomyosin contractile ring assembly","type":"related"},{"name":"regulation of regulation of actin filament localization of cytokinesis, actomyosin contractile ring formation","type":"related"},{"name":"regulation of regulation of actin filament localization of cytokinesis, actomyosin ring biosynthesis","type":"related"},{"name":"regulation of regulation of actin filament localization of cytokinesis, actomyosin ring formation","type":"related"},{"name":"regulation of regulation of actin filament localization of cytokinesis, contractile ring assembly","type":"related"}],"termid":"GO:1903117"}


id: PBO:0039978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARL5A pseudogene 1","termid":"PBO:0039978"}


id: GO:0046842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of trisporic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisporic acid metabolic process","termid":"GO:0046841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"trisporic acid biosynthetic process","synonyms":[{"name":"trisporic acid anabolism","type":"exact"},{"name":"trisporic acid biosynthesis","type":"exact"},{"name":"trisporic acid formation","type":"exact"},{"name":"trisporic acid synthesis","type":"exact"}],"termid":"GO:0046842"}


id: PBO:0073134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC14 like lipid binding 6","termid":"PBO:0073134"}


id: PBO:0077053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF and HNRNPL related immunoregulatory long non-coding RNA","termid":"PBO:0077053"}


id: MONDO:0017151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Pulmonary arterial hypertension (PAH) associated with connective tissue disease (PAH-CTD) is a form of pulmonary arterial hypertension (PAH) characterized by an elevated pulmonary arterial resistance leading to right heart failure observed as a complication of a connective tissue disease.","definition_xrefs":["Orphanet:275798"],"gene_count":0,"genotype_count":0,"name":"obsolete pulmonary arterial hypertension associated with connective tissue disease (obsolete MONDO:0017151)","secondary_identifiers":["ICD9:416.8","SCTID:697903007"],"synonyms":[{"name":"PAH associated with connective tissue disease","type":"exact"}],"termid":"MONDO:0017151","xrefs":{"Monarch":{"xref_id":"0017151"}}}


id: GO:0047380
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + a medium-chain acyl-CoA = a medium-chain carboxylate + CoA. Requires ADP.","definition_xrefs":["EC:3.1.2.19","MetaCyc:3.1.2.19-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete ADP-dependent medium-chain-acyl-CoA hydrolase activity (obsolete GO:0047380)","synonyms":[{"name":"ADP-dependent medium-chain acyl coenzyme A hydrolase activity","type":"related"},{"name":"ADP-dependent medium-chain acyl-CoA hydrolase activity","type":"related"},{"name":"ADP-dependent medium-chain acyl-thioester hydrolase activity","type":"related"},{"name":"ADP-dependent medium-chain hydrolase activity","type":"related"},{"name":"ADP-dependent myristoyl-CoA thioesterase activity","type":"narrow"},{"name":"ADP-dependent-medium-chain-acyl-CoA hydrolase activity","type":"related"}],"termid":"GO:0047380"}


id: PBO:0079764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UFD1 antisense RNA 1","termid":"PBO:0079764"}


id: GO:1901936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of beta-caryophyllene.","definition_xrefs":["PMID:22867794","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene catabolic process","termid":"GO:0051763"},{"relation_name":"is_a","term_name":"beta-caryophyllene metabolic process","termid":"GO:1901935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"beta-caryophyllene catabolic process","synonyms":[{"name":"beta-caryophyllene breakdown","type":"exact"},{"name":"beta-caryophyllene catabolism","type":"exact"},{"name":"beta-caryophyllene degradation","type":"exact"}],"termid":"GO:1901936"}


id: MONDO:0100237
data:
  {"annotated_genes":["SJAG_00660","SJAG_03457","SJAG_00516","SJAG_00120","SJAG_01471","SJAG_02399","SJAG_00212"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89047,89048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009053"},{"annotations":[88891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018163"},{"annotations":[86946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013051"},{"annotations":[88609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0027462"},{"annotations":[88608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0027451"},{"annotations":[87780,87779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014706"},{"annotations":[88905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010572"},{"annotations":[88417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013755"},{"annotations":[87386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010208"}]},"cv_name":"mondo","definition":"An instance of cutis laxa that is inherited.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"cutis laxa","termid":"MONDO:0016175"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00120":null,"SJAG_00212":null,"SJAG_00516":null,"SJAG_00660":null,"SJAG_01471":null,"SJAG_02399":null,"SJAG_03457":null},"genotype_count":0,"is_obsolete":false,"name":"inherited cutis laxa","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:609465","UMLS:C0432334","OMIMPS:123700"],"synonyms":[{"name":"hereditary cutis laxa","type":"exact"}],"termid":"MONDO:0100237","terms_by_termid":{"MONDO:0009053":null,"MONDO:0010208":null,"MONDO:0010572":null,"MONDO:0013051":null,"MONDO:0013755":null,"MONDO:0014706":null,"MONDO:0018163":null,"MONDO:0027451":null,"MONDO:0027462":null},"xrefs":{"Monarch":{"xref_id":"0100237"}}}


id: GO:0047552
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2-oxoaldehyde + NADP+ + H2O = a 2-oxo acid + NADPH + H+.","definition_xrefs":["RHEA:18129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NADP+) activity","termid":"GO:0033721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2-oxoaldehyde dehydrogenase (NADP+) activity","secondary_identifiers":["EC:1.2.1.49","MetaCyc:2-OXOALDEHYDE-DEHYDROGENASE-NADP+-RXN"],"synonyms":[{"name":"2-ketoaldehyde dehydrogenase","type":"broad"},{"name":"2-oxoaldehyde:NADP+ 2-oxidoreductase activity","type":"related"},{"name":"NADP-dependent alpha-ketoaldehyde dehydrogenase activity","type":"related"},{"name":"NADP-linked alpha-ketoaldehyde dehydrogenase activity","type":"related"},{"name":"alpha-ketoaldehyde dehydrogenase activity","type":"broad"},{"name":"methylglyoxal dehydrogenase activity","type":"broad"}],"termid":"GO:0047552"}


id: GO:0031304
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the mitochondrial inner membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of mitochondrial inner membrane (obsolete GO:0031304)","synonyms":[{"name":"intrinsic to mitochondrial inner membrane","type":"narrow"}],"termid":"GO:0031304"}


id: MONDO:0013843
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any meconium ileus in which the cause of the disease is a mutation in the GUCY2C gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"intestinal motility disease","termid":"MONDO:0021189"},{"relation_name":"is_a","term_name":"meconium ileus","termid":"MONDO:0054868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intestinal obstruction in the newborn due to guanylate cyclase 2C deficiency","secondary_identifiers":["ICD9:777.1","MEDGEN:1390359","Orphanet:314376","UMLS:C4518781","GARD:17418","OMIM:614665","SCTID:733447005"],"synonyms":[{"name":"GUCY2C meconium ileus","type":"exact"},{"name":"meconium ileus","type":"broad"},{"name":"meconium ileus caused by mutation in GUCY2C","type":"exact"},{"name":"meconium ileus due to guanylate cyclase 2C deficiency","type":"exact"}],"termid":"MONDO:0013843","xrefs":{"Monarch":{"xref_id":"0013843"}}}


id: PBO:0063277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily A, 3","termid":"PBO:0063277"}


id: PBO:0064253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing A2","termid":"PBO:0064253"}


id: PATO:0000565
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000565 volume value (obsolete PATO:0000565)","termid":"PATO:0000565"}


id: GO:0019679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving propionate that occur in the methylcitrate cycle.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"propionate metabolic process","termid":"GO:0019541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"propionate metabolic process, methylcitrate cycle","secondary_identifiers":["MetaCyc:PWY0-42"],"synonyms":[{"name":"propionate metabolism, methylcitrate cycle","type":"exact"}],"termid":"GO:0019679"}


id: PBO:0074688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 68","termid":"PBO:0074688"}


id: GO:0003101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which epinephrine-norepinephrine modulate the force with which blood passes through the circulatory system.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by hormone","termid":"GO:0001990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by circulatory epinephrine-norepinephrine","synonyms":[{"name":"regulation of blood pressure by circulating adrenaline-noradrenaline","type":"related"}],"termid":"GO:0003101"}


id: GO:0045003
data:
  {"annotated_genes":["SJAG_04530","SJAG_02465","SJAG_00757","SJAG_01708","SJAG_02690","SJAG_01410","SJAG_03221","SJAG_02294","SJAG_02079","SJAG_02267","SJAG_02460","SJAG_02708","SJAG_00935"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72784,79798,109984,119306],"is_not":false,"summary":null,"term":"GO:0045003"},{"annotations":[66140,74050,66976,76848,77522],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000730"},{"annotations":[80293],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000707"},{"annotations":[109497,112149],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010772"},{"annotations":[102463],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902346"}]},"cv_name":"biological_process","definition":"SDSA is a major mechanism of double-strand break repair in mitosis which allows for the error-free repair of a double-strand break without the exchange of adjacent sequences. The broken DNA searches for and base pairs with a homologous region in an intact chromosome. DNA synthesis initiates from the 3' end of the invading DNA strand, using the intact chromosome as the template. Newly synthesized DNA is then displaced from the template and anneal with its complement on the other side of the double-strand break.","definition_xrefs":["PMID:10357855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-strand break repair via homologous recombination","termid":"GO:0000724"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00757":null,"SJAG_00935":null,"SJAG_01410":null,"SJAG_01708":null,"SJAG_02079":null,"SJAG_02267":null,"SJAG_02294":null,"SJAG_02460":null,"SJAG_02465":null,"SJAG_02690":null,"SJAG_02708":null,"SJAG_03221":null,"SJAG_04530":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"double-strand break repair via synthesis-dependent strand annealing","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5693554"],"synonyms":[{"name":"SDSA","type":"broad"},{"name":"mitotic gene conversion","type":"related"}],"termid":"GO:0045003","terms_by_termid":{"GO:0000707":null,"GO:0000730":null,"GO:0010772":null,"GO:0045003":null,"GO:1902346":null}}


id: GO:1904921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of MAPK cascade involved in axon regeneration.","definition_xrefs":["PMID:20203177","GOC:TermGenie","GOC:kmv","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of MAPK cascade involved in axon regeneration (obsolete GO:1904921)","synonyms":[{"name":"down regulation of ERK/MAPK cascade involved in axon regeneration","type":"narrow"},{"name":"down regulation of MAP kinase cascade involved in axon regeneration","type":"exact"},{"name":"down regulation of MAP kinase kinase kinase cascade involved in axon regeneration","type":"exact"},{"name":"down regulation of MAPK cascade involved in axon regeneration","type":"exact"},{"name":"down regulation of MAPK signal transduction involved in axon regeneration","type":"exact"},{"name":"down regulation of MAPK signaling involved in axon regeneration","type":"related"},{"name":"down regulation of MAPK signalling involved in axon regeneration","type":"related"},{"name":"down regulation of MAPKKK cascade during sporulation involved in axon regeneration","type":"narrow"},{"name":"down regulation of MAPKKK cascade involved in axon regeneration","type":"exact"},{"name":"down regulation of mitogen-activated protein kinase cascade involved in axon regeneration","type":"exact"},{"name":"down-regulation of ERK/MAPK cascade involved in axon regeneration","type":"narrow"},{"name":"down-regulation of MAP kinase cascade involved in axon regeneration","type":"exact"},{"name":"down-regulation of MAP kinase kinase kinase cascade involved in axon regeneration","type":"exact"},{"name":"down-regulation of MAPK cascade involved in axon regeneration","type":"exact"},{"name":"down-regulation of MAPK signal transduction involved in axon regeneration","type":"exact"},{"name":"down-regulation of MAPK signaling involved in axon regeneration","type":"related"},{"name":"down-regulation of MAPK signalling involved in axon regeneration","type":"related"},{"name":"down-regulation of MAPKKK cascade during sporulation involved in axon regeneration","type":"narrow"},{"name":"down-regulation of MAPKKK cascade involved in axon regeneration","type":"exact"},{"name":"down-regulation of mitogen-activated protein kinase cascade involved in axon regeneration","type":"exact"},{"name":"downregulation of ERK/MAPK cascade involved in axon regeneration","type":"narrow"},{"name":"downregulation of MAP kinase cascade involved in axon regeneration","type":"exact"},{"name":"downregulation of MAP kinase kinase kinase cascade involved in axon regeneration","type":"exact"},{"name":"downregulation of MAPK cascade involved in axon regeneration","type":"exact"},{"name":"downregulation of MAPK signal transduction involved in axon regeneration","type":"exact"},{"name":"downregulation of MAPK signaling involved in axon regeneration","type":"related"},{"name":"downregulation of MAPK signalling involved in axon regeneration","type":"related"},{"name":"downregulation of MAPKKK cascade during sporulation involved in axon regeneration","type":"narrow"},{"name":"downregulation of MAPKKK cascade involved in axon regeneration","type":"exact"},{"name":"downregulation of mitogen-activated protein kinase cascade involved in axon regeneration","type":"exact"},{"name":"inhibition of ERK/MAPK cascade involved in axon regeneration","type":"narrow"},{"name":"inhibition of MAP kinase cascade involved in axon regeneration","type":"narrow"},{"name":"inhibition of MAP kinase kinase kinase cascade involved in axon regeneration","type":"narrow"},{"name":"inhibition of MAPK cascade involved in axon regeneration","type":"narrow"},{"name":"inhibition of MAPK signal transduction involved in axon regeneration","type":"narrow"},{"name":"inhibition of MAPK signaling involved in axon regeneration","type":"related"},{"name":"inhibition of MAPK signalling involved in axon regeneration","type":"related"},{"name":"inhibition of MAPKKK cascade during sporulation involved in axon regeneration","type":"narrow"},{"name":"inhibition of MAPKKK cascade involved in axon regeneration","type":"narrow"},{"name":"inhibition of mitogen-activated protein kinase cascade involved in axon regeneration","type":"narrow"},{"name":"negative regulation of ERK/MAPK cascade involved in axon regeneration","type":"narrow"},{"name":"negative regulation of MAP kinase cascade involved in axon regeneration","type":"exact"},{"name":"negative regulation of MAP kinase kinase kinase cascade involved in axon regeneration","type":"exact"},{"name":"negative regulation of MAPK signal transduction involved in axon regeneration","type":"exact"},{"name":"negative regulation of MAPK signaling involved in axon regeneration","type":"related"},{"name":"negative regulation of MAPK signalling involved in axon regeneration","type":"related"},{"name":"negative regulation of MAPKKK cascade during sporulation involved in axon regeneration","type":"narrow"},{"name":"negative regulation of MAPKKK cascade involved in axon regeneration","type":"exact"},{"name":"negative regulation of mitogen-activated protein kinase cascade involved in axon regeneration","type":"exact"}],"termid":"GO:1904921"}


id: PR:Q9UT32
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosomal L1 domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein C8F11.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8F11.04","secondary_identifiers":["UniProtKB:Q9UT32"],"synonyms":[{"name":"Spom972h-RSL1D1","type":"exact"},{"name":"U3 snoRNP-associated protein C8F11.04 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT32"}


id: PR:O59868
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A calcium-transporting ATPase type 2C member 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium-transporting ATPase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31E1.02c","secondary_identifiers":["UniProtKB:O59868"],"synonyms":[{"name":"Golgi Ca(2+)-ATPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ATP2C1","type":"exact"}],"termid":"PR:O59868"}


id: MOD:01618
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alaine residue and an L-asparagine residue to L-alanyl-L-isoaspartyl cyclopeptide.","definition_xrefs":["PubMed:19928958","PubMed:3207697","RESID:AA0515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isopeptide crosslinked residues","termid":"MOD:00688"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of ammonia","termid":"MOD:00946"},{"relation_name":"is_a","term_name":"crosslinked L-alanine residue","termid":"MOD:02040"},{"relation_name":"is_a","term_name":"crosslinked L-asparagine residue","termid":"MOD:02042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-alanyl-L-isoaspartyl cyclopeptide","synonyms":[{"name":"(2S,5S)-2-methyl-3,7-dioxo-1,4-diazepane-5-carboxylic acid","type":"exact"},{"name":"1,4.2-anhydro(L-alanyl-L-aspartic acid)","type":"exact"},{"name":"CROSSLNK Alanine isoaspartyl cyclopeptide (Ala-Asn)","type":"exact"},{"name":"L-alanyl-L-isoaspartyl cyclopeptide","type":"exact"}],"termid":"MOD:01618"}


id: GO:0004566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a beta-D-glucuronoside + H2O = an alcohol + D-glucuronate.","definition_xrefs":["EC:3.2.1.31"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"beta-glucuronidase activity","secondary_identifiers":["MetaCyc:BETA-GLUCURONID-RXN","RHEA:17633","Reactome:R-HSA-1678854","Reactome:R-HSA-9036070","Reactome:R-HSA-9036068","Reactome:R-HSA-2162226","Reactome:R-HSA-2162227","Reactome:R-HSA-2318373"],"synonyms":[{"name":"beta-D-glucuronoside glucuronosohydrolase activity","type":"related"},{"name":"beta-glucuronide glucuronohydrolase activity","type":"related"},{"name":"exo-beta-D-glucuronidase activity","type":"related"},{"name":"glucuronidase activity","type":"related"},{"name":"ketodase activity","type":"related"}],"termid":"GO:0004566"}


id: PBO:0054247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1629","termid":"PBO:0054247"}


id: PBO:0111737
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exogenous_promoter","termid":"PBO:0111737"}


id: GO:0052234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a lower concentration of environmental oxygen on or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative aerotaxis on or near other organism involved in symbiotic interaction (obsolete GO:0052234)","synonyms":[{"name":"negative aerotaxis on or near other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052234"}


id: PBO:0040691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCA2 and CDKN1A interacting protein","termid":"PBO:0040691"}


id: PBO:0053089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 2A","termid":"PBO:0053089"}


id: PBO:0038759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR3B pseudogene 4","termid":"PBO:0038759"}


id: FYPO:0000694
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which DNA-1,N6-ethenoadenine N-glycosylase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal DNA-1,N6-ethenoadenine N-glycosylase activity","termid":"FYPO:0000692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"abolished DNA-1,N6-ethenoadenine N-glycosylase activity","synonyms":[{"name":"DNA-1,N6-ethenoadenine N-glycosylase activity abolished","type":"exact"}],"termid":"FYPO:0000694"}


id: PBO:0024873
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae ERO1","termid":"PBO:0024873"}


id: MONDO:0002276
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete arteriosclerotic cardiovascular disease (obsolete MONDO:0002276)","termid":"MONDO:0002276","xrefs":{"Monarch":{"xref_id":"0002276"}}}


id: GO:0030388
data:
  {"annotated_genes":["SJAG_00605"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79582],"is_not":false,"summary":null,"term":"GO:0030388"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving fructose 1,6-bisphosphate, also known as FBP. The D enantiomer is a metabolic intermediate in glycolysis and gluconeogenesis.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00605":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fructose 1,6-bisphosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"fructose 1,6-bisphosphate metabolism","type":"exact"}],"termid":"GO:0030388","terms_by_termid":{"GO:0030388":null}}


id: PBO:0044084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 45 member A3","termid":"PBO:0044084"}


id: MONDO:0017125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete oculofaciocardiodental syndrome (obsolete MONDO:0017125)","termid":"MONDO:0017125","xrefs":{"Monarch":{"xref_id":"0017125"}}}


id: PR:Q9UUD1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An sre1-type sterol regulatory element-binding protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:CNA","UniProtKB:Q9UUD1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sre1-type sterol regulatory element-binding protein 1","termid":"PR:000028989"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol regulatory element-binding protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C2.09","synonyms":[{"name":"Spom972h-sre1","type":"exact"}],"termid":"PR:Q9UUD1"}


id: MONDO:1012644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any von Willebrand disease that occurs in pigs and is characterized by no detectable or a severe quantitative deficiency of the glycoprotein von Willebrand factor (vWF) due to a mutation in the VWF gene.","definition_xrefs":["OMIA:001058-9823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"Von Willebrand disease, pig","termid":"MONDO:1011615"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand disease III, pig","termid":"MONDO:1012644","xrefs":{"Monarch":{"xref_id":"1012644"}}}


id: PBO:0005102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroid oxidoreductase superfamily protein (predicted)","termid":"PBO:0005102"}


id: GO:1903075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of pyridoxine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:15701794","GO_REF:0000075","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"pyridoxine transmembrane transport","termid":"GO:1903092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"pyridoxine import across plasma membrane","synonyms":[{"name":"pyridoxine import into cell","type":"exact"}],"termid":"GO:1903075"}


id: PBO:0064221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C delta 3","termid":"PBO:0064221"}


id: MONDO:0010808
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fatal familial insomnia (FFI) is a very rare form of prion disease characterized by subacute onset of insomnia showing as a reduced overall sleep time, autonomic dysfunction, and motor disturbances.","definition_xrefs":["Orphanet:466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prion disease","termid":"MONDO:0005429"},{"relation_name":"is_a","term_name":"insomnia","termid":"MONDO:0013600"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"fatal familial insomnia","secondary_identifiers":["icd11.foundation:669154658","ICD10CM:A81.83","MedDRA:10072077","ICD9:046.72","GARD:6429","MEDGEN:104768","DOID:0050433","MESH:D034062","NCIT:C84711","OMIM:600072","SCTID:83157008","NANDO:1200191","NORD:1920","UMLS:C0206042"],"synonyms":[{"name":"FFI","type":"related"},{"name":"Insomnia familial fatal","type":"related"},{"name":"Insomnia, fatal familial","type":"related"},{"name":"familial fatal insomnia","type":"related"},{"name":"fatal familial INSOMNIA","type":"related"},{"name":"fatal familial insomnia","type":"exact"}],"termid":"MONDO:0010808","xrefs":{"Monarch":{"xref_id":"0010808"}}}


id: PBO:0061908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily A member 2","termid":"PBO:0061908"}


id: FYPO:0002271
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize glutamine, and therefore requires glutamine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for glutamine","synonyms":[{"name":"glutamine auxotrophy","type":"exact"},{"name":"growth auxotrophic for glutamine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for glutamine during vegetative growth","type":"exact"}],"termid":"FYPO:0002271"}


id: MONDO:1012740
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any xanthinuria that occurs in cattle due to a mutation in the MOCOS gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"xanthinuria, non-human animal","termid":"MONDO:1011450"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xanthinuria, MOCOS-related, cattle","secondary_identifiers":["OMIA:001819-9913"],"synonyms":[{"name":"xanthinuria, type II, cattle","type":"exact"}],"termid":"MONDO:1012740","xrefs":{"Monarch":{"xref_id":"1012740"}}}


id: MONDO:0000841
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete metaphyseal dysplasia (obsolete MONDO:0000841)","termid":"MONDO:0000841","xrefs":{"Monarch":{"xref_id":"0000841"}}}


id: PBO:0050750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 12","termid":"PBO:0050750"}


id: GO:1900586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of arugosin.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"arugosin metabolic process","termid":"GO:1900585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"arugosin catabolic process","synonyms":[{"name":"arugosin breakdown","type":"exact"},{"name":"arugosin catabolism","type":"exact"},{"name":"arugosin degradation","type":"exact"}],"termid":"GO:1900586"}


id: MONDO:0035821
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypospadias","termid":"MONDO:0005345"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated female hypospadias","secondary_identifiers":["GARD:22434","Orphanet:603515","UMLS:C5681495","MEDGEN:1842898"],"termid":"MONDO:0035821","xrefs":{"Monarch":{"xref_id":"0035821"}}}


id: MONDO:0014372
data:
  {"annotated_genes":["SJAG_01897"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88223],"is_not":false,"summary":null,"term":"MONDO:0014372"}]},"cv_name":"mondo","definition":"Any cone-rod dystrophy in which the cause of the disease is a mutation in the TTLL5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy","termid":"MONDO:0015993"},{"relation_name":"is_a","term_name":"TTLL5-related retinopathy","termid":"MONDO:1040038"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01897":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cone-rod dystrophy 19","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:862938","GARD:16022","OMIM:615860","DOID:0111025","UMLS:C4014501"],"synonyms":[{"name":"CORD19","type":"exact"},{"name":"TTLL5 cone-rod dystrophy","type":"exact"},{"name":"cone-rod dystrophy 19","type":"exact"},{"name":"cone-rod dystrophy caused by mutation in TTLL5","type":"exact"},{"name":"cone-rod dystrophy type 19","type":"exact"}],"termid":"MONDO:0014372","terms_by_termid":{"MONDO:0014372":null},"xrefs":{"Monarch":{"xref_id":"0014372"}}}


id: PBO:0046764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome component 4","termid":"PBO:0046764"}


id: PBO:0077849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triosephosphate isomerase 1","termid":"PBO:0077849"}


id: GO:0033074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the breakdown of the monoterpenoid pinene; alpha-pinene is (1S,5S)-2,6,6-trimethylbicyclo[3.1.1]hept-2-ene, and beta-pinene is (1S,5S)-6,6-dimethyl-2-methylenebicyclo[3.1.1]heptane.","definition_xrefs":["PMID:11452597","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pinene metabolic process","termid":"GO:0033073"},{"relation_name":"is_a","term_name":"monoterpene catabolic process","termid":"GO:0043694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"pinene catabolic process","synonyms":[{"name":"pinene breakdown","type":"exact"},{"name":"pinene catabolism","type":"exact"},{"name":"pinene degradation","type":"exact"}],"termid":"GO:0033074"}


id: PBO:0033769
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cytoplasm_with_protein_mislocalized_to_nucleus_during_mitotic_interphase","termid":"PBO:0033769"}


id: PBO:0077778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of outer mitochondrial membrane 70","termid":"PBO:0077778"}


id: GO:0048490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of synaptic vesicle along axonal microtubules from the cell body to the presynapse.","definition_xrefs":["GOC:jid","GOC:lmg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterograde axonal transport","termid":"GO:0008089"},{"relation_name":"is_a","term_name":"synaptic vesicle transport along microtubule","termid":"GO:0099517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"anterograde synaptic vesicle transport","synonyms":[{"name":"anterograde axonal transport of synaptic vesicle","type":"exact"}],"termid":"GO:0048490"}


id: GO:0043112
data:
  {"annotated_genes":["SJAG_05950","SJAG_02619","SJAG_04428","SJAG_03324","SJAG_01448"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[119172,65297,117159,100384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016562"},{"annotations":[104485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001881"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule metabolic process","termid":"GO:0043170"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01448":null,"SJAG_02619":null,"SJAG_03324":null,"SJAG_04428":null,"SJAG_05950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"receptor metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"receptor metabolism","type":"exact"}],"termid":"GO:0043112","terms_by_termid":{"GO:0001881":null,"GO:0016562":null}}


id: PBO:0046171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extracellular leucine rich repeat and fibronectin type III domain containing 2","termid":"PBO:0046171"}


id: PBO:0075069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 118","termid":"PBO:0075069"}


id: GO:0007517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work.","definition_xrefs":["ISBN:0198506732","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"is_a","term_name":"muscle structure development","termid":"GO:0061061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle organ development","termid":"GO:0007517"}


id: MONDO:0005678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A multifactorial disease of cattle resulting from complex interactions between environmental factors, host factors, and pathogens. The environmental factors act as stressors adversely affecting the immune system and other host defenses and enhancing transmission of infecting agents.","definition_xrefs":["MESH:D048090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cattle disease","termid":"MONDO:0024913"},{"relation_name":"is_a","term_name":"respiratory system disorder, non-human animal","termid":"MONDO:0700104"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bovine respiratory disease complex","secondary_identifiers":["EFO:0007180"],"termid":"MONDO:0005678","xrefs":{"Monarch":{"xref_id":"0005678"}}}


id: GO:0031726
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CCR1 chemokine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CCR chemokine receptor binding","termid":"GO:0048020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"CCR1 chemokine receptor binding","synonyms":[{"name":"CCR1 chemokine receptor ligand","type":"narrow"},{"name":"macrophage inflammatory protein-1 alpha receptor binding","type":"exact"}],"termid":"GO:0031726"}


id: PBO:0048246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 12G","termid":"PBO:0048246"}


id: PBO:0065035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 1","termid":"PBO:0065035"}


id: PBO:0071707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 5","termid":"PBO:0071707"}


id: GO:0140712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a Frizzled Nuclear Import pathway.","definition_xrefs":["PMID:22510459","PMID:22579286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Frizzled Nuclear Import pathway","termid":"GO:0140710"},{"relation_name":"is_a","term_name":"negative regulation of non-canonical Wnt signaling pathway","termid":"GO:2000051"},{"relation_name":"negatively_regulates","term_name":"Frizzled Nuclear Import pathway","termid":"GO:0140709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of Frizzled Nuclear Import pathway","synonyms":[{"name":"negative regulation of FNI","type":"broad"},{"name":"negative regulation of Frizzled Nuclear Import Wnt Pathway","type":"exact"}],"termid":"GO:0140712"}


id: GO:0150064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Early postnatal vertebrate developmental process, during which axons of retinal ganglion cells (RGCs), transmitting overlapping inputs from both eyes, segregate into distinct eye-specific non-overlapping regions in the dorsal lateral geniculate nucleus (dLGN) of the thalamus.","definition_xrefs":["GOC:aruk","PMID:16025107","GOC:bc","PMID:29322522","PMID:22632727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"},{"relation_name":"part_of","term_name":"visual system development","termid":"GO:0150063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vertebrate eye-specific patterning","synonyms":[{"name":"binocular vision development","type":"related"},{"name":"eye-specific patterning","type":"broad"},{"name":"eye-specific segregation","type":"broad"},{"name":"vertebrate eye-specific segregation","type":"exact"}],"termid":"GO:0150064"}


id: FYPO:0006099
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cytoplasm is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cytoplasm","termid":"FYPO:0006098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to cytoplasm","synonyms":[{"name":"decreased protein localisation to cytoplasm","type":"exact"},{"name":"decreased protein localization to cytoplasm during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to cytoplasm during vegetative growth","type":"exact"},{"name":"reduced protein localization to cytoplasm","type":"exact"}],"termid":"FYPO:0006099"}


id: PBO:0061590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurotrophic receptor tyrosine kinase 1","termid":"PBO:0061590"}


id: PBO:0071998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7","termid":"PBO:0071998"}


id: MONDO:0011388
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cervical cancer (obsolete MONDO:0011388)","synonyms":[{"name":"cervical cancer","type":"related"}],"termid":"MONDO:0011388","xrefs":{"Monarch":{"xref_id":"0011388"}}}


id: PBO:0089971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smaug family RNA-binding protein Vts1","termid":"PBO:0089971"}


id: GO:0000277
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + cytochrome c L-lysine = S-adenosyl-L-homocysteine + cytochrome c N6-methyl-L-lysine. This is the addition of a methyl group to the N6 atom of a lysine residue in cytochrome c.","definition_xrefs":["EC:2.1.1.59"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lysine N-methyltransferase activity","termid":"GO:0016279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008276","GO:0003824","GO:0140096","GO:0016741","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"[cytochrome c]-lysine N-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.59-RXN","RHEA:24312"],"synonyms":[{"name":"S-adenosyl-L-methionine:cytochrome c-L-lysine 6-N-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:cytochrome c-L-lysine N6-methyltransferase activity","type":"related"},{"name":"cytochrome c (lysine) methyltransferase activity","type":"related"},{"name":"cytochrome c methyltransferase activity","type":"related"},{"name":"cytochrome c-lysine N-methyltransferase activity","type":"related"},{"name":"cytochrome c-specific protein methylase III activity","type":"related"},{"name":"cytochrome c-specific protein-lysine methyltransferase activity","type":"related"}],"termid":"GO:0000277"}


id: GO:0089715
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + tRNA containing N6-threonylcarbamoyladenosine at position 37 = S-adenosyl-L-homocysteine + tRNA containing N6-methylthreonylcarbamoyladenosine at position 37.","definition_xrefs":["RHEA:70027","PMID:25063302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (adenine) methyltransferase activity","termid":"GO:0016426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140101","GO:0003674","GO:0003824","GO:0016741","GO:0016740","GO:0140098"],"is_obsolete":false,"name":"tRNA (L-threonylcarbamoyladenosine(37)-C2) methyltransferase activity","secondary_identifiers":["MetaCyc:RXN0-7114"],"synonyms":[{"name":"tRNA (L-threonylcarbamoyladenosine(37)-C(2)) methyltransferase activity","type":"exact"},{"name":"tRNA (L-threonylcarbamoyladenosine37-C2-) methyltransferase activity","type":"exact"},{"name":"tRNA m6t6A37 methyltransferase activity","type":"exact"}],"termid":"GO:0089715"}


id: FYPO:0000815
data:
  {"alleles_by_uniquename":{"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03891:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03891","name":"alx1delta","uniquename":"SJAG_03891:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121070],"is_not":false,"summary":null,"term":"FYPO:0000815"},{"annotations":[121053,121051,121046,121100],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003779"},{"annotations":[121281,121280,121274,121326,121325,121273,121333,121101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007772"},{"annotations":[121257,121249,121241,121245,121242,121254],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001556"},{"annotations":[121064],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003976"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear envelope organization is abnormal. 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S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1cat(D422E,D424E aa)","display_uniquename":"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-2","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"vps32delta":{"display_name":"vps32delta","display_uniquename":"vps32delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01242:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal nuclear envelope organization","references_by_uniquename":{"PMID:21802294":null,"PMID:24184107":null,"PMID:26774782":null,"PMID:28954740":null,"PMID:32109380":null,"PMID:32243490":null},"single_locus_annotated_genes":["SJAG_03449","SJAG_03940","SJAG_03892","SJAG_02763","SJAG_01906","SJAG_03891","SJAG_04464","SJAG_01242","SJAG_05207","SJAG_04284","SJAG_01745"],"single_locus_genotype_uniquenames":["vps32delta","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","nup61delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","nem1delta","man1delta","cmp7delta","lem2delta","ned1delta","alx1delta","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","vps4delta","nem2delta"],"synonyms":[{"name":"abnormal nuclear envelope organisation","type":"exact"},{"name":"abnormal nuclear envelope organization during mitotic cell cycle","type":"related"},{"name":"abnormal nuclear envelope organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000815","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000815":null,"FYPO:0001556":null,"FYPO:0003779":null,"FYPO:0003976":null,"FYPO:0007772":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: GO:0033061
data:
  {"annotated_genes":["SJAG_03221","SJAG_02708","SJAG_00757","SJAG_01708"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[80295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033063"},{"annotations":[94485,80296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033065"},{"annotations":[62613,109491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032798"}]},"cv_name":"cellular_component","definition":"A protein complex containing accessory proteins which bind a recombinase (e.g. Rad51) and bind single-stranded DNA (ssDNA), and promote nucleation of the recombinase onto ssDNA through facilitating recombinase-RPA exchange.","definition_xrefs":["GOC:elh","GOC:vw","InterPro:IPR003488","GOC:mah","PMID:12912992","PMID:32414915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00757":null,"SJAG_01708":null,"SJAG_02708":null,"SJAG_03221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"DNA recombinase mediator complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0033061","terms_by_termid":{"GO:0032798":null,"GO:0033063":null,"GO:0033065":null}}


id: PBO:0068867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 107, pseudogene","termid":"PBO:0068867"}


id: PBO:0001575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RING finger-like protein Ini1","termid":"PBO:0001575"}


id: GO:0044867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a host organism effects a change in the enzyme activity of a virus with which it is infected.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by host of viral molecular function","termid":"GO:0044868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation by host of viral catalytic activity","termid":"GO:0044867"}


id: PR:O74825
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit RPB4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02695","PANTHER:PTHR21297:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II subunit rpb4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.14","secondary_identifiers":["UniProtKB:O74825"],"synonyms":[{"name":"RNA polymerase II subunit B4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR2D","type":"exact"}],"termid":"PR:O74825"}


id: PBO:0060522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparaginyl-tRNA synthetase 1","termid":"PBO:0060522"}


id: GO:0141193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a signaling molecule binding to an intracellular receptor of the nuclear receptor protein family, and ending with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:25614732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular receptor signaling pathway","termid":"GO:0030522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"nuclear receptor-mediated signaling pathway","synonyms":[{"name":"nuclear receptor signaling pathway","type":"exact"}],"termid":"GO:0141193"}


id: GO:0015341
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a zinc ion or zinc ions from the inside of the cell to the outside of the cell across a membrane according to the reaction H+(out) + Zn2+(in) = H+(in) + Zn2+(out). The activity is driven by proton motive force.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport","PMID:35226479","TC:2.A.4.2.3","TC:2.A.4.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc:proton antiporter activity","termid":"GO:0140826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"zinc efflux antiporter activity","synonyms":[{"name":"zinc efflux permease activity","type":"broad"}],"termid":"GO:0015341"}


id: PBO:0060607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCBP2 antisense RNA 1","termid":"PBO:0060607"}


id: PATO:0002468
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structure quality inhering in a bearer by virtue of the bearer's being capable of swelling or stretching.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distensible","termid":"PATO:0002468"}


id: PATO:0000896
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000896 f2 fertility value (obsolete PATO:0000896)","termid":"PATO:0000896"}


id: MONDO:0015845
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine cervical aplasia and agenesis","secondary_identifiers":["GARD:20186","MEDGEN:1673872","UMLS:C5190813","Orphanet:180145","icd11.foundation:1670353767"],"termid":"MONDO:0015845","xrefs":{"Monarch":{"xref_id":"0015845"}}}


id: GO:0046232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of carbazole, a heterocyclic aromatic compound containing a dibenzopyrrole system that is produced during coal gasification and is present in cigarette smoke. Coal tar produced at high temperature contains an average of 1.5% carbazole. It is used widely in synthesis of dyes, pharmaceuticals, and plastics and is a suspected carcinogen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbazole metabolic process","termid":"GO:0018884"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carbazole catabolic process","synonyms":[{"name":"carbazole breakdown","type":"exact"},{"name":"carbazole catabolism","type":"exact"},{"name":"carbazole degradation","type":"exact"}],"termid":"GO:0046232"}


id: GO:0060228
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of phosphatidylcholine-sterol O-acyltransferase.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph","PMID:4335615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0140677","GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"phosphatidylcholine-sterol O-acyltransferase activator activity","synonyms":[{"name":"LCAT activator activity","type":"narrow"}],"termid":"GO:0060228"}


id: PBO:0027255
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_nitrogen_starvation","termid":"PBO:0027255"}


id: PBO:0082994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic L-asparaginase, involved in asparagine catabolism; catalyzes hydrolysis of L-asparagine to aspartic acid and ammonia; important enzyme for the treatment of acute lymphoblastic leukemia; has low glutaminase activity and dependence; synthesized constitutively","termid":"PBO:0082994"}


id: PBO:0041330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 88","termid":"PBO:0041330"}


id: PBO:0000242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GNS1/SUR4 family protein (predicted)","termid":"PBO:0000242"}


id: PR:O14296
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A charged multivesicular body protein 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10476:SF1","OMA:SCHPO01849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 24 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.14","secondary_identifiers":["UniProtKB:O14296"],"synonyms":[{"name":"Spom972h-CHMP3","type":"exact"}],"termid":"PR:O14296"}


id: PBO:0018035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium ion transmembrane transporter (predicted)","termid":"PBO:0018035"}


id: GO:0071625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The behavior in which an organism produces sounds by a mechanism involving its respiratory system.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vocalization behavior","synonyms":[{"name":"vocalisation behaviour","type":"exact"}],"termid":"GO:0071625"}


id: PBO:0077890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p63 regulated 1 like pseudogene 1","termid":"PBO:0077890"}


id: PBO:0031268
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_stress","termid":"PBO:0031268"}


id: GO:0047711
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: blasticidin S + H2O = deaminohydroxyblasticidin S + NH3.","definition_xrefs":["MetaCyc:BLASTICIDIN-S-DEAMINASE-RXN","EC:3.5.4.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"blasticidin-S deaminase activity","secondary_identifiers":["RHEA:10148"],"synonyms":[{"name":"blasticidin-S aminohydrolase activity","type":"related"}],"termid":"GO:0047711"}


id: MONDO:0015927
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"eosinophilic pneumonia","termid":"MONDO:0005749"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic eosinophilic pneumonia","secondary_identifiers":["Orphanet:182101","GARD:20246","SCTID:708031000","UMLS:C3872845","MEDGEN:836928"],"termid":"MONDO:0015927","xrefs":{"Monarch":{"xref_id":"0015927"}}}


id: PBO:0053275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LILRB1 antisense RNA 1","termid":"PBO:0053275"}


id: GO:0051754
data:
  {"annotated_genes":["SJAG_01805","SJAG_01601","SJAG_04126","SJAG_00600","SJAG_03926","SJAG_03418","SJAG_03353","SJAG_01082","SJAG_00229","SJAG_03989","SJAG_04699","SJAG_04259","SJAG_03681"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66106,72294,92734],"is_not":false,"summary":null,"term":"GO:0051754"},{"annotations":[116357,95610,103614,100935,115083,103089,109658,115643,117761,106321],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990813"}]},"cv_name":"biological_process","definition":"The cell cycle process in which centromeres of sister chromatids are joined during meiosis.","definition_xrefs":["PMID:14730319","PMID:16325576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic sister chromatid cohesion","termid":"GO:0051177"},{"relation_name":"is_a","term_name":"centromeric sister chromatid cohesion","termid":"GO:0070601"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00600":null,"SJAG_01082":null,"SJAG_01601":null,"SJAG_01805":null,"SJAG_03353":null,"SJAG_03418":null,"SJAG_03681":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"meiotic sister chromatid cohesion, centromeric","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"centromeric meiotic sister chromatin cohesion","type":"exact"},{"name":"meiotic sister chromatid cohesion at centromere","type":"exact"},{"name":"sister chromatid cohesion at centromere at meiosis I","type":"exact"}],"termid":"GO:0051754","terms_by_termid":{"GO:0051754":null,"GO:1990813":null}}


id: GO:0048781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cyanophore differentiation.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pigment cell differentiation","termid":"GO:0050932"},{"relation_name":"regulates","term_name":"cyanophore differentiation","termid":"GO:0048774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cyanophore differentiation","termid":"GO:0048781"}


id: GO:0016987
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Sigma factors act as the promoter specificity subunit of eubacterial and plant plastid multisubunit RNA polymerases, whose core subunit composition is often described as alpha(2)-beta-beta-prime. Although sigma does not bind DNA on its own, when combined with the core to form the holoenzyme, the sigma factor binds specifically to promoter elements. The sigma subunit is released once elongation begins.","definition_xrefs":["GOC:txnOH-2018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription factor activity","termid":"GO:0003700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003700"},{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140110","GO:0003674","GO:0003700"],"is_obsolete":false,"name":"sigma factor activity","secondary_identifiers":["GO:0001053","GO:0000996"],"synonyms":[{"name":"DNA-dependent RNA polymerase promoter selection factor","type":"exact"},{"name":"bacterial sigma factor activity","type":"narrow"},{"name":"core DNA-dependent RNA polymerase binding promoter specificity activity","type":"exact"},{"name":"plastid sigma factor activity","type":"narrow"},{"name":"promoter selection factor activity","type":"narrow"},{"name":"sigma transcription factor","type":"exact"}],"termid":"GO:0016987"}


id: PBO:0014602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bin3 family, 7SK RNA methyltransferase (predicted)","termid":"PBO:0014602"}


id: PBO:0005131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex subunit Alp16","termid":"PBO:0005131"}


id: PBO:0073105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sidekick cell adhesion molecule 1","termid":"PBO:0073105"}


id: PBO:0030168
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_lysis","termid":"PBO:0030168"}


id: PBO:0054292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1683","termid":"PBO:0054292"}


id: GO:1900323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of maltotetraose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of maltotetraose transport","termid":"GO:1900321"},{"relation_name":"positively_regulates","term_name":"maltotetraose transport","termid":"GO:2001099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of maltotetraose transport","synonyms":[{"name":"activation of maltotetraose transport","type":"narrow"},{"name":"up regulation of maltotetraose transport","type":"exact"},{"name":"up-regulation of maltotetraose transport","type":"exact"},{"name":"upregulation of maltotetraose transport","type":"exact"}],"termid":"GO:1900323"}


id: GO:0099163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling to or from a synapse, mediated by nitric oxide.","definition_xrefs":["PMID:19038221","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic signaling","termid":"GO:0099536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"synaptic signaling by nitric oxide","termid":"GO:0099163"}


id: GO:0051056
data:
  {"annotated_genes":["SJAG_04462","SJAG_01790","SJAG_00082","SJAG_01805","SJAG_00078","SJAG_01464","SJAG_02514","SJAG_03592","SJAG_02169","SJAG_04943","SJAG_00526","SJAG_04329","SJAG_03488","SJAG_04776","SJAG_00600","SJAG_02379","SJAG_03631","SJAG_06270","SJAG_03936","SJAG_01386","SJAG_04455","SJAG_03353","SJAG_00883","SJAG_03508","SJAG_00229","SJAG_03681","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046580"},{"annotations":[73283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035024"},{"annotations":[97453,109065,92538,106871,117763,103090,93549,94741,109375,101405,94656,95269,112015,108932,74647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"},{"annotations":[91817,112374,95620,89344,104206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031031"},{"annotations":[71748,76616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032483"},{"annotations":[91779,106324,115223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031029"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"small GTPase-mediated signal transduction","termid":"GO:0007264"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00082":null,"SJAG_00229":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00883":null,"SJAG_01386":null,"SJAG_01464":null,"SJAG_01790":null,"SJAG_01805":null,"SJAG_02169":null,"SJAG_02379":null,"SJAG_02514":null,"SJAG_03048":null,"SJAG_03353":null,"SJAG_03488":null,"SJAG_03508":null,"SJAG_03592":null,"SJAG_03631":null,"SJAG_03681":null,"SJAG_03936":null,"SJAG_04329":null,"SJAG_04455":null,"SJAG_04462":null,"SJAG_04776":null,"SJAG_04943":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of small GTPase mediated signal transduction","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9012999"],"synonyms":[{"name":"regulation of small GTPase-mediated signal transduction","type":"exact"}],"termid":"GO:0051056","terms_by_termid":{"GO:0031029":null,"GO:0031030":null,"GO:0031031":null,"GO:0032483":null,"GO:0035024":null,"GO:0046580":null}}


id: SO:0000119
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a sequence that is regulated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_attribute","termid":"SO:0000401"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulated","termid":"SO:0000119"}


id: PATO:0000516
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's having sensitivity toward an external stimulus.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitivity toward","termid":"PATO:0000085"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensitive toward","synonyms":[{"name":"sensitive","type":"exact"}],"termid":"PATO:0000516"}


id: GO:0006681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving galactosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of galactose by a ceramide group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylceramide metabolic process","termid":"GO:0006677"},{"relation_name":"is_a","term_name":"galactolipid metabolic process","termid":"GO:0019374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"galactosylceramide metabolic process","synonyms":[{"name":"galactosylceramide metabolism","type":"exact"}],"termid":"GO:0006681"}


id: PBO:0062936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl 4-hydroxylase subunit alpha 2","termid":"PBO:0062936"}


id: PBO:0079097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (GTA) 10-1","termid":"PBO:0079097"}


id: MONDO:0009524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intellectual disability-spasticity-ectrodactyly syndrome is a rare intellectual disability syndrome characterized by severe intellectual disability, spastic paraplegia (with wasting of the lower limbs) and distal transverse defects of the limbs (e.g. ectrodactyly, syndactyly, clinodactyly of the hands and/or feet).","definition_xrefs":["Orphanet:1891"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"intellectual disability-spasticity-ectrodactyly syndrome","secondary_identifiers":["OMIM:246555","UMLS:C1855501","GARD:3523","MESH:C537446","MEDGEN:340888","SCTID:763743003"],"synonyms":[{"name":"Jancar syndrome","type":"exact"},{"name":"ectrodactyly, spastic paraplegia and intellectual disability","type":"related"},{"name":"ectrodactyly, spastic paraplegia and mental retardation","type":"related"},{"name":"intellectual disability spasticity ectrodactyly","type":"related"},{"name":"intellectual disability, spasticity and transverse limb defects","type":"related"},{"name":"limb defects, distal transverse, with intellectual disability and spasticity","type":"related"},{"name":"limb defects, distal transverse, with mental retardation and spasticity","type":"related"},{"name":"mental retardation spasticity ectrodactyly","type":"related"},{"name":"mental retardation, spasticity and transverse limb defects","type":"related"}],"termid":"MONDO:0009524","xrefs":{"Monarch":{"xref_id":"0009524"}}}


id: PBO:0028663
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_gross_chromosomal_rearrangement_during_replication_fork_processing","termid":"PBO:0028663"}


id: PBO:0041066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRI3 binding protein","termid":"PBO:0041066"}


id: GO:1904161
data:
  {"annotated_genes":["SJAG_04877","SJAG_02818","SJAG_00814","SJAG_05197"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78623,97053,104648,110949],"is_not":false,"summary":null,"term":"GO:1904161"}]},"cv_name":"biological_process","definition":"Any DNA synthesis that is involved in UV-damage excision repair.","definition_xrefs":["PMID:10704216","GO_REF:0000060","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA synthesis involved in DNA repair","termid":"GO:0000731"},{"relation_name":"part_of","term_name":"UV-damage excision repair","termid":"GO:0070914"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00814":null,"SJAG_02818":null,"SJAG_04877":null,"SJAG_05197":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"DNA synthesis involved in UV-damage excision repair","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA synthesis during UV-damage excision repair","type":"related"},{"name":"DNA synthesis during UV-damaged DNA endonuclease-dependent excision repair","type":"related"},{"name":"DNA synthesis during UVDE-dependent excision repair","type":"related"},{"name":"DNA synthesis during UVER","type":"related"},{"name":"DNA synthesis involved in AER","type":"related"},{"name":"DNA synthesis involved in UV-damaged DNA endonuclease-dependent excision repair","type":"exact"},{"name":"DNA synthesis involved in UVDE-dependent excision repair","type":"exact"},{"name":"DNA synthesis involved in UVER","type":"exact"},{"name":"DNA synthesis involved in alternative excision repair","type":"related"},{"name":"mitotic DNA repair synthesis involved in UV-damage excision repair","type":"narrow"},{"name":"mitotic DNA repair synthesis involved in UV-damaged DNA endonuclease-dependent excision repair","type":"narrow"},{"name":"mitotic DNA repair synthesis involved in UVDE-dependent excision repair","type":"narrow"},{"name":"mitotic DNA repair synthesis involved in UVER","type":"narrow"}],"termid":"GO:1904161","terms_by_termid":{"GO:1904161":null}}


id: SO:0000525
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one VJ-gene and one J-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"VJ_gene_segment","termid":"SO:0000576"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_VJ_J_cluster","synonyms":[{"name":"V VJ J cluster","type":"exact"},{"name":"V-(VJ)-J-CLUSTER","type":"exact"}],"termid":"SO:0000525"}


id: PBO:0036258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Pex12 involved in peroxisome organization and biogenesis (predicted)","termid":"PBO:0036258"}


id: GO:0031855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an oxytocin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"oxytocin receptor binding","synonyms":[{"name":"oxytocin receptor ligand","type":"narrow"}],"termid":"GO:0031855"}


id: PBO:0049867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helt bHLH transcription factor","termid":"PBO:0049867"}


id: PBO:0061135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NME/NM23 nucleoside diphosphate kinase 1 pseudogene 1","termid":"PBO:0061135"}


id: MONDO:0022999
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distichiasis heart congenital anomalies","termid":"MONDO:0022999","xrefs":{"Monarch":{"xref_id":"0022999"}}}


id: MONDO:1011126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Priapism that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"priapism, non-human animal","termid":"MONDO:1010280"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"priapism, domestic cat","secondary_identifiers":["OMIA:001166-9685"],"termid":"MONDO:1011126","xrefs":{"Monarch":{"xref_id":"1011126"}}}


id: PBO:0005044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set3 complex subunit Hif2","termid":"PBO:0005044"}


id: MONDO:0003766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer involving a dorsal plus ventral thalamus.","definition_xrefs":["MONDO:patterns/cancer"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diencephalic cancer","termid":"MONDO:0002786"},{"relation_name":"is_a","term_name":"thalamic disorder","termid":"MONDO:0003081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"thalamic cancer","secondary_identifiers":["MEDGEN:83429","UMLS:C0346902","SCTID:188287005","icd11.foundation:610018988","DOID:6098","NCIT:C4576"],"synonyms":[{"name":"cancer of dorsal plus ventral thalamus","type":"exact"},{"name":"dorsal plus ventral thalamus cancer","type":"exact"},{"name":"malignant dorsal plus ventral thalamus neoplasm","type":"exact"},{"name":"malignant neoplasm of dorsal plus ventral thalamus","type":"exact"},{"name":"malignant neoplasm of thalamus","type":"exact"},{"name":"malignant neoplasm of the thalamus","type":"exact"},{"name":"malignant thalamic neoplasm","type":"exact"},{"name":"malignant thalamic neoplasms","type":"exact"},{"name":"malignant thalamic tumor","type":"exact"},{"name":"malignant thalamic tumors","type":"exact"},{"name":"malignant thalamic tumour","type":"exact"},{"name":"malignant thalamic tumours","type":"exact"},{"name":"malignant thalamus neoplasm","type":"exact"},{"name":"malignant thalamus neoplasms","type":"exact"},{"name":"malignant thalamus tumor","type":"exact"},{"name":"malignant thalamus tumors","type":"exact"},{"name":"malignant thalamus tumour","type":"exact"},{"name":"malignant thalamus tumours","type":"exact"},{"name":"malignant tumor of thalamus","type":"exact"},{"name":"malignant tumor of the thalamus","type":"exact"},{"name":"malignant tumour of thalamus","type":"exact"},{"name":"malignant tumour of the thalamus","type":"exact"},{"name":"thalamic neoplasm","type":"related"},{"name":"tumor of thalamus","type":"exact"},{"name":"tumour of thalamus","type":"exact"}],"termid":"MONDO:0003766","xrefs":{"Monarch":{"xref_id":"0003766"}}}


id: PBO:0060844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofilament medium pseudogene 1","termid":"PBO:0060844"}


id: PBO:0052536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein related peptidase 9","termid":"PBO:0052536"}


id: PBO:0080993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB24 divergent transcript","termid":"PBO:0080993"}


id: PBO:0077603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 11E","termid":"PBO:0077603"}


id: PBO:0078351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (CTC) 17-1","termid":"PBO:0078351"}


id: PBO:0027880
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_H4-K20_monomethylation","termid":"PBO:0027880"}


id: MONDO:0018154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Madelung disease, or deformity (MD) is a predominantly bilateral wrist anomaly characterized by shortened and bowed radii and long ulnae leading to dorsal dislocation of the distal ulna and limited mobility of the wrist and elbow.","definition_xrefs":["Orphanet:35688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Leri-Weill dyschondrosteosis","termid":"MONDO:0007481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Madelung deformity","secondary_identifiers":["SCTID:4530000","ICD9:755.54","icd11.foundation:1398663515","MESH:C562398","GARD:12973","MedDRA:10007700","UMLS:C0152441","MEDGEN:57537"],"termid":"MONDO:0018154","xrefs":{"Monarch":{"xref_id":"0018154"}}}


id: PBO:0016086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein Pwp1 (predicted)","termid":"PBO:0016086"}


id: PBO:0069245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 500, pseudogene","termid":"PBO:0069245"}


id: PBO:0064479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase eta","termid":"PBO:0064479"}


id: PBO:0041044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 1","termid":"PBO:0041044"}


id: PBO:0002850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic serine-tRNA ligase Srs1 (predicted)","termid":"PBO:0002850"}


id: PBO:0029325
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H2A_phosphorylation_at_rDNA","termid":"PBO:0029325"}


id: PR:P48003
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pht1 gene.","definition_xrefs":["UniProtKB:P48003","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A.Z (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11B10.10c","synonyms":[{"name":"Spom972h-pht1","type":"exact"}],"termid":"PR:P48003"}


id: PBO:0067800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 102","termid":"PBO:0067800"}


id: SO:0000234
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Messenger RNA is the intermediate molecule between DNA and protein. It includes UTR and coding sequences. It does not contain introns.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature_transcript","termid":"SO:0000233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/MRNA","http://www.gencodegenes.org/gencode_biotypes.html"],"synonyms":[{"name":"INSDC_feature:mRNA","type":"exact"},{"name":"messenger RNA","type":"exact"},{"name":"protein_coding_transcript","type":"exact"}],"termid":"SO:0000234"}


id: GO:0009830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the breakdown of the cell wall that contributes to the process of abscission.","definition_xrefs":["GOC:lr","GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type cell wall modification","termid":"GO:0009827"},{"relation_name":"is_a","term_name":"cell wall disassembly","termid":"GO:0044277"},{"relation_name":"part_of","term_name":"abscission","termid":"GO:0009838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"cell wall modification involved in abscission","synonyms":[{"name":"cell wall modification during abscission","type":"related"}],"termid":"GO:0009830"}


id: GO:0015923
data:
  {"annotated_genes":["SJAG_01858","SJAG_01883","SJAG_05272","SJAG_03032","SJAG_00310","SJAG_02711","SJAG_04851","SJAG_04850"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004559"},{"annotations":[57639,58025,58256,64104,98744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008496"},{"annotations":[80509,68179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004571"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of mannosyl compounds, substances containing a group derived from a cyclic form of mannose or a mannose derivative.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00310":null,"SJAG_01858":null,"SJAG_01883":null,"SJAG_02711":null,"SJAG_03032":null,"SJAG_04850":null,"SJAG_04851":null,"SJAG_05272":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"mannosidase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0015923","terms_by_termid":{"GO:0004559":null,"GO:0004571":null,"GO:0008496":null}}


id: MONDO:0000444
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ARC syndrome (obsolete MONDO:0000444)","synonyms":[{"name":"pericyte cell syndromic disease","type":"exact"}],"termid":"MONDO:0000444","xrefs":{"Monarch":{"xref_id":"0000444"}}}


id: PBO:0079081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-iMet (anticodon CAT) 2-1","termid":"PBO:0079081"}


id: PBO:0072067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S11 pseudogene 5","termid":"PBO:0072067"}


id: MONDO:0002186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of maxillary sinusitis.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maxillary sinusitis","termid":"MONDO:0005842"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute maxillary sinusitis","secondary_identifiers":["UMLS:C0155804","ICD10CM:J01.0","icd11.foundation:1617309258","DOID:2050","ICD9:461.0","SCTID:68272006","MEDGEN:510086"],"synonyms":[{"name":"acute antritis","type":"exact"},{"name":"maxillary sinusitis, acute","type":"exact"}],"termid":"MONDO:0002186","xrefs":{"Monarch":{"xref_id":"0002186"}}}


id: PBO:0080597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 27","termid":"PBO:0080597"}


id: GO:0045320
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A proton-transporting ATP synthase complex found in the chloroplast thylakoid membrane; it catalyzes the phosphorylation of ADP to ATP during photo-phosphorylation.","definition_xrefs":["GOC:pj","ISBN:0716743663","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete chloroplast proton-transporting ATP synthase complex (obsolete GO:0045320)","synonyms":[{"name":"chloroplast hydrogen-translocating F-type ATPase complex","type":"exact"},{"name":"chloroplast proton-transporting F-type ATPase complex","type":"exact"},{"name":"hydrogen-translocating F-type ATPase complex","type":"broad"}],"termid":"GO:0045320"}


id: PBO:0051343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2D-24 (non-functional)","termid":"PBO:0051343"}


id: MONDO:0001661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An early stage of diabetic retinopathy that is characterized by retinal hemorrhage and exudate, but without proliferation of the blood vessels.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetic retinopathy","termid":"MONDO:0005266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066"],"is_obsolete":false,"name":"background diabetic retinopathy","secondary_identifiers":["DOID:13208","NCIT:C35668","UMLS:C0004606","ICD9:362.03","MEDGEN:2531","ICD9:362.01","SCTID:390834004"],"synonyms":[{"name":"non proliferative diabetic retinopathy","type":"exact"},{"name":"non-proliferative diabetic retinopathy","type":"exact"}],"termid":"MONDO:0001661","xrefs":{"Monarch":{"xref_id":"0001661"}}}


id: PBO:0039560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 53","termid":"PBO:0039560"}


id: PBO:0079104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSC complex subunit 2","termid":"PBO:0079104"}


id: MOD:01831
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-carboxamidomethyl-L-cysteine sulfone.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"S-carboxamidomethyl-L-cysteine","termid":"MOD:01060"},{"relation_name":"is_a","term_name":"iodoacetamide derivatized residue","termid":"MOD:00397"},{"relation_name":"is_a","term_name":"sulfur oxygenated L-cysteine","termid":"MOD:00708"},{"relation_name":"is_a","term_name":"sulfur dioxygenated residue","termid":"MOD:01855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-carboxamidomethyl-L-cysteine sulfone","synonyms":[{"name":"CamCO2","type":"exact"},{"name":"S-carbamoylmethyl-L-cysteine sulfone","type":"exact"}],"termid":"MOD:01831"}


id: GO:0102727
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: campest-4-en-3beta-ol + NAD = campest-4-en-3-one + NADH + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3beta-hydroxysteroid dehydrogenase activity (obsolete GO:0102727)","termid":"GO:0102727"}


id: MONDO:0020372
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset zonular cataract","termid":"MONDO:0020379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"early-onset sutural cataract","secondary_identifiers":["Orphanet:98985","GARD:16885"],"synonyms":[{"name":"early-onset cataract with Y-shaped suture opacities","type":"exact"}],"termid":"MONDO:0020372","xrefs":{"Monarch":{"xref_id":"0020372"}}}


id: PBO:0067427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 546, pseudogene","termid":"PBO:0067427"}


id: PBO:0113068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the TOM (Translocase of Outer Membrane) complex; responsible for initial import of mitochondrially directed proteins; mediates interaction between TOM and TIM complexes and acts as receptor for precursor proteins; implicated in mitochondrial accumulation of amyloid beta peptides via direct interaction with amyloid beta peptide residues 25-42 followed by transfer to Tom40p and transport through the TOM channel","termid":"PBO:0113068"}


id: GO:0052919
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aliphatic (R)-hydroxynitrile = an aliphatic aldehyde or ketone + hydrogen cyanide.","definition_xrefs":["EC:4.1.2.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"aliphatic (R)-hydroxynitrile lyase activity","synonyms":[{"name":"(R)-HNL activity","type":"broad"},{"name":"(R)-hydroxynitrile lyase activity","type":"broad"},{"name":"(R)-oxynitrilase activity","type":"broad"}],"termid":"GO:0052919"}


id: GO:2000755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sphingomyelin catabolic process.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of phospholipid catabolic process","termid":"GO:0060697"},{"relation_name":"is_a","term_name":"regulation of sphingomyelin catabolic process","termid":"GO:2000754"},{"relation_name":"positively_regulates","term_name":"sphingomyelin catabolic process","termid":"GO:0006685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of sphingomyelin catabolic process","synonyms":[{"name":"positive regulation of sphingomyelin breakdown","type":"exact"},{"name":"positive regulation of sphingomyelin catabolism","type":"exact"},{"name":"positive regulation of sphingomyelin degradation","type":"exact"}],"termid":"GO:2000755"}


id: PBO:0067033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 47, pseudogene","termid":"PBO:0067033"}


id: PBO:0085585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in Arf3p regulation and in transcription regulation; localizes to the nucleus and to endocytic patches; contains an N-terminal Zn-finger and ArfGAP homology domain, a C-terminal glutamine-rich region, and a UBA (ubiquitin associated) domain; gts1 mutations affect budding, cell size, heat tolerance, sporulation, life span, ultradian rhythms, endocytosis; expression oscillates in a pattern similar to metabolic oscillations","termid":"PBO:0085585"}


id: GO:0016972
data:
  {"annotated_genes":["SJAG_02489","SJAG_01647","SJAG_00196","SJAG_02827","SJAG_03992"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59914,70677,100304],"is_not":false,"summary":null,"term":"GO:0016972"},{"annotations":[58258,65553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016971"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 R'C(R)SH + O2 = R'C(R)S-S(R)CR' + 2 H2O2.","definition_xrefs":["RHEA:17357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disulfide oxidoreductase activity","termid":"GO:0015036"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor","termid":"GO:0016670"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00196":null,"SJAG_01647":null,"SJAG_02489":null,"SJAG_02827":null,"SJAG_03992":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0015036"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674","GO:0015036"],"is_obsolete":false,"name":"thiol oxidase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:THIOL-OXIDASE-RXN","UM-BBD_reactionID:r1293","EC:1.8.3.2"],"synonyms":[{"name":"sulfhydryl oxidase activity","type":"related"},{"name":"thiol:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0016972","terms_by_termid":{"GO:0016971":null,"GO:0016972":null}}


id: GO:0019557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-histidine into other compounds, including glutamate and formate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate metabolic process","termid":"GO:0006536"},{"relation_name":"is_a","term_name":"L-histidine catabolic process","termid":"GO:0006548"},{"relation_name":"is_a","term_name":"formate metabolic process","termid":"GO:0015942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-histidine catabolic process to glutamate and formate","secondary_identifiers":["MetaCyc:PWY-5028"],"synonyms":[{"name":"histidine breakdown to glutamate and formate","type":"exact"},{"name":"histidine catabolic process to glutamate and formate","type":"broad"},{"name":"histidine degradation to glutamate and formate","type":"exact"}],"termid":"GO:0019557"}


id: PBO:0064554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proopiomelanocortin","termid":"PBO:0064554"}


id: PBO:0058697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6825","termid":"PBO:0058697"}


id: MONDO:0024559
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial thoracic aortic aneurysm and aortic dissection","termid":"MONDO:0019625"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aortic aneurysm, familial thoracic 1","secondary_identifiers":["UMLS:C0345050","GARD:15408","OMIM:607086","MEDGEN:91038","MESH:C562834","Orphanet:229"],"synonyms":[{"name":"AAT1","type":"exact"},{"name":"Erdheim cystic medial necrosis of aorta","type":"related"},{"name":"FAA1","type":"related"},{"name":"aneurysm, thoracic aortic","type":"related"},{"name":"annuloaortic ectasia","type":"related"},{"name":"aortic aneurysm, familial thoracic","type":"related"},{"name":"aortic dissection, familial","type":"related"}],"termid":"MONDO:0024559","xrefs":{"Monarch":{"xref_id":"0024559"}}}


id: GO:0051247
data:
  {"annotated_genes":["SJAG_05265","SJAG_03699","SJAG_01047","SJAG_04477","SJAG_02043","SJAG_01131","SJAG_01517","SJAG_01249","SJAG_01544","SJAG_02812","SJAG_01436","SJAG_02189","SJAG_02723","SJAG_00642","SJAG_03048","SJAG_01489","SJAG_00766","SJAG_00712","SJAG_00071","SJAG_01210","SJAG_03550","SJAG_04990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"},{"annotations":[108487,118994,71520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000767"},{"annotations":[114530,100518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070131"},{"annotations":[102279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070134"},{"annotations":[66698,62259,68858,69836,70345,68352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901800"},{"annotations":[113566,110736,104203,118936,108490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032436"},{"annotations":[101206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904352"},{"annotations":[70301,67841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045901"},{"annotations":[74472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045948"},{"annotations":[67842,78279,70302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045905"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"positively_regulates","term_name":"protein metabolic process","termid":"GO:0019538"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00642":null,"SJAG_00712":null,"SJAG_00766":null,"SJAG_01047":null,"SJAG_01131":null,"SJAG_01210":null,"SJAG_01249":null,"SJAG_01436":null,"SJAG_01489":null,"SJAG_01517":null,"SJAG_01544":null,"SJAG_02043":null,"SJAG_02189":null,"SJAG_02723":null,"SJAG_02812":null,"SJAG_03048":null,"SJAG_03550":null,"SJAG_03699":null,"SJAG_04477":null,"SJAG_04990":null,"SJAG_05265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0032270"],"synonyms":[{"name":"activation of cellular protein metabolic process","type":"narrow"},{"name":"activation of protein metabolic process","type":"narrow"},{"name":"positive regulation of cellular protein metabolic process","type":"exact"},{"name":"positive regulation of cellular protein metabolism","type":"exact"},{"name":"positive regulation of protein metabolism","type":"exact"},{"name":"stimulation of cellular protein metabolic process","type":"narrow"},{"name":"stimulation of protein metabolic process","type":"narrow"},{"name":"up regulation of cellular protein metabolic process","type":"exact"},{"name":"up regulation of protein metabolic process","type":"exact"},{"name":"up-regulation of cellular protein metabolic process","type":"exact"},{"name":"up-regulation of protein metabolic process","type":"exact"},{"name":"upregulation of cellular protein metabolic process","type":"exact"},{"name":"upregulation of protein metabolic process","type":"exact"}],"termid":"GO:0051247","terms_by_termid":{"GO:0032436":null,"GO:0045901":null,"GO:0045905":null,"GO:0045948":null,"GO:0070131":null,"GO:0070134":null,"GO:1901800":null,"GO:1904352":null,"GO:1905786":null,"GO:2000767":null}}


id: GO:0032868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to peptide hormone","termid":"GO:0043434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to insulin","synonyms":[{"name":"response to insulin stimulus","type":"exact"}],"termid":"GO:0032868"}


id: GO:0070333
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha6-beta4 integrin complex bound to the adaptor proteins Shc and Grb2.","definition_xrefs":["PMID:7556090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"alpha6-beta4 integrin-Shc-Grb2 complex","synonyms":[{"name":"ITGA6-ITGB4-SHC-GRB2 complex","type":"narrow"}],"termid":"GO:0070333"}


id: MONDO:0030490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited oocyte maturation defect","termid":"MONDO:0014769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"oocyte maturation defect 11","secondary_identifiers":["MEDGEN:1794243","OMIM:619643","UMLS:C5562033"],"synonyms":[{"name":"OOMD11","type":"exact"}],"termid":"MONDO:0030490","xrefs":{"Monarch":{"xref_id":"0030490"}}}


id: PBO:0084366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipid-binding ER protein involved in ER-plasma membrane tethering; one of 6 proteins (Ist2p, Scs2p, Scs22p, Tcb1p, Tcb2p, Tcb3p) that connect ER to plasma membrane and regulate PI4P levels by controlling access of Sac1p phosphatase to its substrate PI4P in PM; contains 3 calcium and lipid binding domains; non-tagged protein also localizes to mitochondria; C-termini of Tcb1p, Tcb2p and Tcb3p interact; TCB1 has a paralog, TCB2, that arose from the whole genome duplication","termid":"PBO:0084366"}


id: PBO:0058564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6506","termid":"PBO:0058564"}


id: GO:1990225
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Narrow, electron-dense part of the rhoptry that extends through the conoid at the apical tip of an apicomplexan parasite. The rhoptry neck serves as a duct through which the contents of the rhoptry are secreted after attachment to the host has been completed and at the commencement of invasion.","definition_xrefs":["GOC:giardia","GOC:pr","PMID:24070999","PMID:24002067","PMID:23499754","PMID:23937520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"rhoptry","termid":"GO:0020008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"rhoptry neck","termid":"GO:1990225"}


id: PBO:0062003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily H member 2","termid":"PBO:0062003"}


id: MONDO:0005031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A poorly circumscribed neoplasm arising from the soft tissues. It is characterized by the presence of spindle-shaped fibroblasts and an infiltrative growth pattern.","definition_xrefs":["NCIT:C3042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblastic neoplasm","termid":"MONDO:0006209"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibromatosis","secondary_identifiers":["SCTID:723976005","EFO:0000497","MEDGEN:8836","UMLS:C0016048"],"synonyms":[{"name":"fibromatosis","type":"exact"}],"termid":"MONDO:0005031","xrefs":{"Monarch":{"xref_id":"0005031"}}}


id: PBO:0088952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2406 family conserved fungal protein","termid":"PBO:0088952"}


id: PBO:0078397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 7-1","termid":"PBO:0078397"}


id: GO:0009603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a symbiotic fungus, a fungus living in close physical association with another organism, is received and converted into a molecular signal.","definition_xrefs":["GOC:hb","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of symbiont","termid":"GO:0009602"},{"relation_name":"is_a","term_name":"response to symbiotic fungus","termid":"GO:0009610"},{"relation_name":"is_a","term_name":"detection of fungus","termid":"GO:0016046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of symbiotic fungus","synonyms":[{"name":"detection of symbiotic fungi","type":"exact"},{"name":"perception of symbiotic fungi","type":"related"},{"name":"perception of symbiotic fungus","type":"related"}],"termid":"GO:0009603"}


id: FYPO:0008036
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is higher than normal at the CENP-A boundary. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:36200823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased nucleosome occupancy","termid":"FYPO:0007655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000641","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased nucleosome occupancy at CENP-A boundary","termid":"FYPO:0008036"}


id: GO:0035594
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a ganglioside, a ceramide oligosaccharide carrying in addition to other sugar residues, one or more sialic acid residues.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosphingolipid binding","termid":"GO:0043208"},{"relation_name":"is_a","term_name":"ceramide binding","termid":"GO:0097001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0008289"],"is_obsolete":false,"name":"ganglioside binding","termid":"GO:0035594"}


id: PBO:0055162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2582","termid":"PBO:0055162"}


id: MONDO:0006326
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma arising from and extending beyond the structures of the eye.","definition_xrefs":["NCIT:C7913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ocular melanoma","termid":"MONDO:0006325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"ocular melanoma with extraocular extension","secondary_identifiers":["UMLS:C0278869","MEDGEN:75884"],"synonyms":[{"name":"extraocular extension melanoma","type":"exact"},{"name":"extraocular extension of melanoma","type":"exact"},{"name":"ocular melanoma with extraocular extension","type":"exact"}],"termid":"MONDO:0006326","xrefs":{"Monarch":{"xref_id":"0006326"}}}


id: PBO:0055178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2602","termid":"PBO:0055178"}


id: PBO:0084461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannosyltransferase of the cis-Golgi apparatus; initiates the polymannose outer chain elongation of N-linked oligosaccharides of glycoproteins","termid":"PBO:0084461"}


id: GO:0051629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that prevents the activation of the directed movement of epinephrine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibition of neurotransmitter uptake","termid":"GO:0051609"},{"relation_name":"is_a","term_name":"negative regulation of epinephrine uptake","termid":"GO:0051627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"inhibition of epinephrine uptake","synonyms":[{"name":"inhibition of adrenaline uptake","type":"exact"},{"name":"inhibition of epinephrine import","type":"exact"}],"termid":"GO:0051629"}


id: GO:0033393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of homogalacturonan, a pectidic polymer, characterized by a backbone of 1,4-linked alpha-D-GalpA residues that can be methyl-esterified at C-6 and carry acetyl groups on O-2 and O-3.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide catabolic process","termid":"GO:0000272"},{"relation_name":"is_a","term_name":"homogalacturonan metabolic process","termid":"GO:0010394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"homogalacturonan catabolic process","secondary_identifiers":["MetaCyc:PWY-1081"],"synonyms":[{"name":"homogalacturonan breakdown","type":"exact"},{"name":"homogalacturonan catabolism","type":"exact"},{"name":"homogalacturonan degradation","type":"exact"}],"termid":"GO:0033393"}


id: MONDO:0010830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neuronal ceroid lipofuscinosis in which the cause of the disease is a mutation in the CLN8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"late infantile neuronal ceroid lipofuscinosis","termid":"MONDO:0015674"},{"relation_name":"is_a","term_name":"juvenile neuronal ceroid lipofuscinosis","termid":"MONDO:0019262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005559","MONDO:0002525","MONDO:0002561","MONDO:0002039"],"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis 8","secondary_identifiers":["SCTID:703526007","GARD:17152","DOID:0110723","Orphanet:228354","UMLS:C1838570","OMIM:600143","MESH:C537952","MEDGEN:374004"],"synonyms":[{"name":"CLN8","type":"exact"},{"name":"CLN8 disease","type":"related"},{"name":"CLN8 neuronal ceroid lipofuscinosis","type":"exact"},{"name":"ceroid lipofuscinosis, neuronal, 8","type":"related"},{"name":"ceroid lipofuscinosis, neuronal, type 8","type":"exact"},{"name":"neuronal ceroid lipofuscinosis 8","type":"exact"},{"name":"neuronal ceroid lipofuscinosis caused by mutation in CLN8","type":"exact"},{"name":"neuronal ceroid lipofuscinosis type 8","type":"exact"}],"termid":"MONDO:0010830","xrefs":{"Monarch":{"xref_id":"0010830"}}}


id: GO:0060605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a lumen by hollowing out a solid rod or cord.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube formation","termid":"GO:0035148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tube lumen cavitation","termid":"GO:0060605"}


id: PBO:0091876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extracellular acid phosphatase Pho1","termid":"PBO:0091876"}


id: GO:0005848
data:
  {"annotated_genes":["SJAG_04022","SJAG_02037","SJAG_01791","SJAG_03594","SJAG_03853","SJAG_01412"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95273,99947,100901,101438,111662,113423],"is_not":false,"summary":null,"term":"GO:0005848"}]},"cv_name":"cellular_component","definition":"A protein complex required for mRNA cleavage but not for poly(A) addition.","definition_xrefs":["PMID:10357856","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA cleavage factor complex","termid":"GO:0005849"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01412":null,"SJAG_01791":null,"SJAG_02037":null,"SJAG_03594":null,"SJAG_03853":null,"SJAG_04022":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"mRNA cleavage stimulating factor complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CstF complex","type":"narrow"},{"name":"cleavage stimulation factor activity","type":"related"}],"termid":"GO:0005848","terms_by_termid":{"GO:0005848":null}}


id: PBO:0083872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein of unknown function; predicted to be part of an SCF ubiquitin protease complex; involved in regulating protein levels of sulfur metabolism enzymes; may interact with ribosomes, based on co-purification experiments","termid":"PBO:0083872"}


id: MONDO:0024876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease that involves the tendon sheath.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disease of the tendon","termid":"MONDO:0100010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tendon sheath disorder","secondary_identifiers":["MEDGEN:675994","ICD9:727.9","SCTID:312381009","UMLS:C0729734"],"synonyms":[{"name":"disease of tendon sheath","type":"exact"},{"name":"disease or disorder of tendon sheath","type":"exact"},{"name":"disorder of tendon sheath","type":"exact"},{"name":"tendon sheath disease","type":"exact"},{"name":"tendon sheath disease or disorder","type":"exact"},{"name":"tendon sheath disorder","type":"exact"}],"termid":"MONDO:0024876","xrefs":{"Monarch":{"xref_id":"0024876"}}}


id: PBO:0012608
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae ADR2","termid":"PBO:0012608"}


id: PBO:0002870
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.21","termid":"PBO:0002870"}


id: PBO:0050512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox C12","termid":"PBO:0050512"}


id: GO:0097732
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A non-motile cilium where the axoneme has a ring of nine outer microtubule doublets plus two central microtubules (and is therefore called a 9+2 axoneme).","definition_xrefs":["GOC:cilia","PMID:21307074","PMID:22118931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-motile cilium","termid":"GO:0097730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"9+2 non-motile cilium","synonyms":[{"name":"9+2 immotile cilium","type":"related"},{"name":"non-motile 9+2 cilium","type":"exact"}],"termid":"GO:0097732"}


id: PBO:0070566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 32","termid":"PBO:0070566"}


id: PBO:0066519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ral guanine nucleotide dissociation stimulator like 4","termid":"PBO:0066519"}


id: MONDO:0022435
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A complication of poorly controlled type 1 diabetes mellitus in children characterized by linear growth impairment, glycogenic hepatopathy, and Cushingoid features.","definition_xrefs":["NCIT:C130997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mauriac syndrome","secondary_identifiers":["MEDGEN:526123","ICD9:258.1","UMLS:C0221005","SCTID:80660001","GTR:AN0543843","GTR:AN0543890"],"synonyms":[{"name":"Mauriac syndrome","type":"exact"},{"name":"Mauriac's syndrome","type":"exact"},{"name":"dwarfism-hepatomegaly-obesity-juvenile diabetes syndrome","type":"related"}],"termid":"MONDO:0022435","xrefs":{"Monarch":{"xref_id":"0022435"}}}


id: PBO:0086066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that interacts with Sec72p and Hrr25p","termid":"PBO:0086066"}


id: GO:0009254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The continual breakdown and regeneration of peptidoglycan required to maintain the bacterial cell wall. Peptidoglycans consist of long glycan strands of alternating residues of beta-(1,4) linked N-acetylglucosamine and N-acetylmuramic acid, cross-linked by short peptides.","definition_xrefs":["PMID:31296364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidoglycan metabolic process","termid":"GO:0000270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidoglycan turnover","secondary_identifiers":["GO:0009287"],"synonyms":[{"name":"murein turnover","type":"exact"}],"termid":"GO:0009254"}


id: GO:0072094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signaling at short range between cells of the ureteric bud terminus and the kidney mesenchyme that positively regulates the formation of the metanephric renal vesicle.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal vesicle induction","termid":"GO:0072034"},{"relation_name":"is_a","term_name":"positive regulation of metanephros development","termid":"GO:0072216"},{"relation_name":"positively_regulates","term_name":"metanephric renal vesicle formation","termid":"GO:0072093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric renal vesicle induction","synonyms":[{"name":"positive regulation of metanephros formation","type":"broad"}],"termid":"GO:0072094"}


id: GO:0000182
data:
  {"annotated_genes":["SJAG_04766","SJAG_04855","SJAG_04527","SJAG_03354","SJAG_05253","SJAG_03905","SJAG_00247"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73831,75892,103993,104735],"is_not":false,"summary":null,"term":"GO:0000182"},{"annotations":[116888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043110"},{"annotations":[104101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110035"},{"annotations":[71547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001002"}]},"cv_name":"molecular_function","definition":"Binding to a DNA sequence encoding a ribosomal RNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_03354":null,"SJAG_03905":null,"SJAG_04527":null,"SJAG_04766":null,"SJAG_04855":null,"SJAG_05253":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"rDNA binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ribosomal DNA binding","type":"exact"}],"termid":"GO:0000182","terms_by_termid":{"GO:0000182":null,"GO:0001002":null,"GO:0043110":null,"GO:0110035":null}}


id: MONDO:0008433
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Small cell lung cancer (SCLC) is a highly aggressive malignant neoplasm, accounting for 10-15% of lung cancer cases, characterized byrapid growth, and early metastasis. SCLC usually manifests as a large hilar mass with bulky mediastinal lymphadenopathy presenting clinically with chest pain, persistent cough, dyspnea, wheezing, hoarseness, hemoptysis, loss of appetite, weight loss, and neurological and endocrine paraneoplastic syndromes. SCLC is primarily reported in elderly people with a history of long-term tobacco exposure.","definition_xrefs":["Orphanet:70573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell carcinoma","termid":"MONDO:0000402"},{"relation_name":"is_a","term_name":"lung carcinoma","termid":"MONDO:0005138"},{"relation_name":"is_a","term_name":"lung neuroendocrine neoplasm","termid":"MONDO:0005454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"small cell lung carcinoma","secondary_identifiers":["DOID:5411","ICD9:162.9","GARD:9344","NCIT:C4917","DOID:5409","icd11.foundation:1800431439","ONCOTREE:SCLC","EFO:0000702","SCTID:254632001","MESH:D055752","OMIM:182280","MEDGEN:57450","UMLS:C0149925"],"synonyms":[{"name":"SCLC","type":"broad"},{"name":"SCLC1","type":"related"},{"name":"Small cell lung cancer","type":"exact"},{"name":"lung oat cell carcinoma","type":"exact"},{"name":"lung small cell carcinoma","type":"exact"},{"name":"lung small cell neuroendocrine carcinoma","type":"exact"},{"name":"oat cell carcinoma","type":"broad"},{"name":"oat cell carcinoma (morphologic abnormality)","type":"broad"},{"name":"oat cell carcinoma of lung","type":"exact"},{"name":"oat cell carcinoma of the lung","type":"exact"},{"name":"oat cell lung carcinoma","type":"exact"},{"name":"poorly differentiated endocrine neoplasm","type":"broad"},{"name":"small cell cancer of the lung","type":"related"},{"name":"small cell cancer of the lung, somatic","type":"exact"},{"name":"small cell carcinoma of lung","type":"exact"},{"name":"small cell carcinoma of the lung","type":"exact"},{"name":"small cell lung cancer","type":"exact"},{"name":"small cell neuroendocrine carcinoma of lung","type":"exact"},{"name":"small cell neuroendocrine carcinoma of the lung","type":"exact"},{"name":"small-cell cancer of lung","type":"exact"}],"termid":"MONDO:0008433","xrefs":{"Monarch":{"xref_id":"0008433"}}}


id: PBO:0060242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin binding protein H like","termid":"PBO:0060242"}


id: PBO:0067808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 110","termid":"PBO:0067808"}


id: GO:1901952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of anterograde dense core granule transport.","definition_xrefs":["GOC:kmv","GOC:TermGenie","PMID:23358451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of vesicle transport along microtubule","termid":"GO:1901609"},{"relation_name":"is_a","term_name":"regulation of anterograde dense core granule transport","termid":"GO:1901951"},{"relation_name":"is_a","term_name":"negative regulation of dense core granule transport","termid":"GO:1904810"},{"relation_name":"negatively_regulates","term_name":"anterograde neuronal dense core vesicle transport","termid":"GO:1990048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of anterograde dense core granule transport","synonyms":[{"name":"down regulation of anterograde dense core granule transport","type":"exact"},{"name":"down-regulation of anterograde dense core granule transport","type":"exact"},{"name":"downregulation of anterograde dense core granule transport","type":"exact"},{"name":"inhibition of anterograde dense core granule transport","type":"narrow"}],"termid":"GO:1901952"}


id: PBO:0001149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ammonium transporter Amt2","termid":"PBO:0001149"}


id: PBO:0034423
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-condition_(obsolete_condition)","termid":"PBO:0034423"}


id: GO:0034957
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-nitrophenol + 2 NADH + 2 H+ = 3-hydroxyaminophenol + 2 NAD+ + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-nitrophenol nitroreductase activity (obsolete GO:0034957)","termid":"GO:0034957"}


id: GO:0007598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein activation cascade that contributes to blood coagulation and consists of the self-limited process linking exposure and activation of tissue factor to the activation of clotting factor X.","definition_xrefs":["GOC:pde","GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein activation cascade","termid":"GO:0072376"},{"relation_name":"part_of","term_name":"blood coagulation, fibrin clot formation","termid":"GO:0072378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"blood coagulation, extrinsic pathway","secondary_identifiers":["Reactome:R-HSA-140834"],"termid":"GO:0007598"}


id: PBO:0088307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein translocation subcomplex subunit Sec63","termid":"PBO:0088307"}


id: GO:0008890
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + glycine = L-2-amino-3-oxobutanoate + CoA.","definition_xrefs":["RHEA:20736","EC:2.3.1.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-acetyltransferase activity","termid":"GO:0016453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glycine C-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R00371","MetaCyc:AKBLIG-RXN"],"synonyms":[{"name":"glycine acetyltransferase activity","type":"related"}],"termid":"GO:0008890"}


id: PBO:0109935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mov10 RNA helicase","termid":"PBO:0109935"}


id: FYPO:0002216
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are viable and are curved along the long axis in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable curved vegetative cell population (obsolete FYPO:0002216)","synonyms":[{"name":"population of curved viable cells","type":"exact"}],"termid":"FYPO:0002216"}


id: GO:0003122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A vasodilation process resulting from secretion of norepinephrine into the bloodstream or released by nerve endings.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasodilation","termid":"GO:0042311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"norepinephrine-mediated vasodilation","secondary_identifiers":["GO:0003126","GO:0003125"],"synonyms":[{"name":"regulation of vasodilation by circulating noradrenaline","type":"related"},{"name":"regulation of vasodilation by circulating norepinephrine","type":"related"},{"name":"regulation of vasodilation by neuronal noradrenaline","type":"related"},{"name":"regulation of vasodilation by neuronal norepinephrine","type":"related"},{"name":"regulation of vasodilation by noradrenaline","type":"related"},{"name":"regulation of vasodilation by norepinephrine","type":"related"}],"termid":"GO:0003122"}


id: GO:1905875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of postsynaptic density organization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:21887379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"regulation of postsynaptic density organization","termid":"GO:1905874"},{"relation_name":"negatively_regulates","term_name":"postsynaptic density organization","termid":"GO:0097106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of postsynaptic density organization","synonyms":[{"name":"down regulation of PSD organization","type":"exact"},{"name":"down regulation of post synaptic density organization","type":"exact"},{"name":"down regulation of post-synaptic density organization","type":"exact"},{"name":"down regulation of postsynaptic density organisation","type":"exact"},{"name":"down regulation of postsynaptic density organization","type":"exact"},{"name":"down-regulation of PSD organization","type":"exact"},{"name":"down-regulation of post synaptic density organization","type":"exact"},{"name":"down-regulation of post-synaptic density organization","type":"exact"},{"name":"down-regulation of postsynaptic density organisation","type":"exact"},{"name":"down-regulation of postsynaptic density organization","type":"exact"},{"name":"downregulation of PSD organization","type":"exact"},{"name":"downregulation of post synaptic density organization","type":"exact"},{"name":"downregulation of post-synaptic density organization","type":"exact"},{"name":"downregulation of postsynaptic density organisation","type":"exact"},{"name":"downregulation of postsynaptic density organization","type":"exact"},{"name":"inhibition of PSD organization","type":"narrow"},{"name":"inhibition of post synaptic density organization","type":"narrow"},{"name":"inhibition of post-synaptic density organization","type":"narrow"},{"name":"inhibition of postsynaptic density organisation","type":"narrow"},{"name":"inhibition of postsynaptic density organization","type":"narrow"},{"name":"negative regulation of PSD organization","type":"exact"},{"name":"negative regulation of post synaptic density organization","type":"exact"},{"name":"negative regulation of post-synaptic density organization","type":"exact"},{"name":"negative regulation of postsynaptic density organisation","type":"exact"}],"termid":"GO:1905875"}


id: GO:0004285
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of protein hormones, neuropeptides and renin from their precursors, generally by cleavage of -Lys-Arg-Xaa at the Arg-Xaa bond.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete proprotein convertase 1 activity (obsolete GO:0004285)","synonyms":[{"name":"NEC 1 activity","type":"narrow"},{"name":"PC1 activity","type":"narrow"},{"name":"neuroendocrine convertase 1 activity","type":"narrow"},{"name":"prohormone convertase 3","type":"related"},{"name":"prohormone convertase I activity","type":"narrow"},{"name":"proprotein convertase 1 activity","type":"exact"}],"termid":"GO:0004285"}


id: MONDO:0013454
data:
  {"annotated_genes":["SJAG_01298"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88710],"is_not":false,"summary":null,"term":"MONDO:0013454"}]},"cv_name":"mondo","definition":"Any Leber congenital amaurosis in which the cause of the disease is a mutation in the IMPDH1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Leber congenital amaurosis","termid":"MONDO:0018998"},{"relation_name":"is_a","term_name":"IMPDH1-related retinopathy","termid":"MONDO:1040051"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01298":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005328"],"is_obsolete":false,"name":"Leber congenital amaurosis 11","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["HGNC:6052","MEDGEN:326698","DOID:0110216","ICD10CM:H35.5","OMIM:613837","MESH:C564140","UMLS:C1840284","GARD:10488"],"synonyms":[{"name":"IMPDH1 Leber congenital amaurosis","type":"exact"},{"name":"LCA11","type":"exact"},{"name":"Leber congenital amaurosis 11","type":"exact"},{"name":"Leber congenital amaurosis caused by mutation in IMPDH1","type":"exact"},{"name":"Leber congenital amaurosis type 11","type":"exact"},{"name":"amaurosis congenita of Leber, type 11","type":"related"}],"termid":"MONDO:0013454","terms_by_termid":{"MONDO:0013454":null},"xrefs":{"Monarch":{"xref_id":"0013454"}}}


id: GO:0102539
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-alpha-D-fucosamine + NAD(P) = UDP-2-acetamido-4-dehydro-2,6-dideoxy-beta-D-glucose + H+ + NAD(P)H.","definition_xrefs":["GOC:pz","PMID:10627048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"UDP-N-acetyl-alpha-D-fucosamine dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-14769"],"termid":"GO:0102539"}


id: PR:O42699
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl1902 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L19-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.14","synonyms":[{"name":"Spom972h-rpl1902","type":"exact"}],"termid":"PR:O42699"}


id: PBO:0041123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain containing 6 pseudogene 1","termid":"PBO:0041123"}


id: PBO:0039637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminopeptidase O (putative)","termid":"PBO:0039637"}


id: MONDO:0000049
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete invasive pneumococcal disease, recurrent isolated (obsolete MONDO:0000049)","secondary_identifiers":["OMIMPS:610799"],"termid":"MONDO:0000049","xrefs":{"Monarch":{"xref_id":"0000049"}}}


id: MONDO:0010696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"omphalocele","termid":"MONDO:0019015"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"omphalocele, X-linked","secondary_identifiers":["GARD:18587","UMLS:C3275625","MEDGEN:477256","OMIM:310980"],"synonyms":[{"name":"omphalocele, X-linked","type":"exact"}],"termid":"MONDO:0010696","xrefs":{"Monarch":{"xref_id":"0010696"}}}


id: PBO:0055965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 78, pseudogene","termid":"PBO:0055965"}


id: MONDO:0003840
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare benign adipose tissue neoplasm of the epicardium of the heart.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart lipoma","termid":"MONDO:0003841"},{"relation_name":"is_a","term_name":"benign neoplasm of epicardium","termid":"MONDO:0021508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"epicardium lipoma","secondary_identifiers":["DOID:6284","UMLS:C1333411","MEDGEN:234221","NCIT:C6742"],"synonyms":[{"name":"epicardial lipoma","type":"exact"},{"name":"epicardium lipoma","type":"exact"},{"name":"lipoma of epicardium","type":"exact"},{"name":"lipoma of the epicardium","type":"exact"}],"termid":"MONDO:0003840","xrefs":{"Monarch":{"xref_id":"0003840"}}}


id: GO:0090418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription of target genes that are transcribed as part of the S phase of the mitotic cell cycle.","definition_xrefs":["PMID:16912276"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription involved in S-phase of mitotic cell cycle (obsolete GO:0090418)","synonyms":[{"name":"activation of S phase specific transcription in the mitotic cell cycle","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter during S phase of the mitotic cell cycle","type":"related"},{"name":"activation of transcription involved in S phase of mitotic cell cycle","type":"related"},{"name":"positive regulation of S phase specific transcription in the mitotic cell cycle","type":"related"},{"name":"positive regulation of transcription from RNA polymerase II promoter during S phase of the mitotic cell cycle","type":"related"},{"name":"positive regulation of transcription involved in S-phase of mitotic cell cycle","type":"exact"},{"name":"up-regulation of S phase specific transcription in the mitotic cell cycle","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter during S phase of the mitotic cell cycle","type":"related"},{"name":"up-regulation of transcription involved in S phase of mitotic cell cycle","type":"related"}],"termid":"GO:0090418"}


id: PR:Q9C102
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutamate synthase [NADPH] large chain that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate synthase [NADPH] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1E7.07","secondary_identifiers":["UniProtKB:Q9C102"],"synonyms":[{"name":"NADPH-GOGAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gltB","type":"exact"}],"termid":"PR:Q9C102"}


id: PBO:0011466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inheritance GTPase, tubulin-like (predicted)","termid":"PBO:0011466"}


id: FYPO:0001106
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione-disulfide reductase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"},{"relation_name":"is_a","term_name":"abnormal glutathione disulfide oxidoreductase activity","termid":"FYPO:0003963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000661","FYPO:0000654","FYPO:0000652","FYPO:0000707","FYPO:0000002"],"is_obsolete":false,"name":"abnormal glutathione-disulfide reductase activity","synonyms":[{"name":"abnormal glutathione-disulphide reductase activity","type":"exact"}],"termid":"FYPO:0001106"}


id: PBO:0028219
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiseptate_cell_during_cellular_response_to_salt_stress","termid":"PBO:0028219"}


id: FYPO:0001146
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of misfolded glycoprotein degradation is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein degradation during vegetative growth","termid":"FYPO:0000846"},{"relation_name":"is_a","term_name":"decreased proteolysis during vegetative growth","termid":"FYPO:0005443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"decreased misfolded glycoprotein degradation during vegetative growth","synonyms":[{"name":"decreased misfolded glycoprotein catabolic process during vegetative growth","type":"exact"},{"name":"decreased misfolded glycoprotein catabolism during vegetative growth","type":"exact"},{"name":"decreased misfolded glycoprotein degradation during mitotic cell cycle","type":"related"},{"name":"reduced misfolded glycoprotein degradation during vegetative growth","type":"exact"}],"termid":"FYPO:0001146"}


id: PBO:0059150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGUK p55 scaffold protein 2","termid":"PBO:0059150"}


id: GO:0006783
data:
  {"annotated_genes":["SJAG_00626","SJAG_01841","SJAG_03173","SJAG_04944","SJAG_01192","SJAG_01155","SJAG_04984","SJAG_00097","SJAG_05283","SJAG_02876","SJAG_01372","SJAG_04397","SJAG_04109","SJAG_00699","SJAG_03961","SJAG_03862","SJAG_01786","SJAG_04515","SJAG_02896"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76056,100037,102060,102909,107021,113726,115734],"is_not":false,"summary":null,"term":"GO:0006783"},{"annotations":[81786,80137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006784"},{"annotations":[59546,60690,63936,68926,57318,81783,65914,63949],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006782"},{"annotations":[78671,73099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019354"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, from less complex precursors.","definition_xrefs":["GOC:jl","PMID:11788607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin-containing compound biosynthetic process","termid":"GO:0006779"},{"relation_name":"is_a","term_name":"heme metabolic process","termid":"GO:0042168"},{"relation_name":"is_a","term_name":"pigment biosynthetic process","termid":"GO:0046148"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_00626":null,"SJAG_00699":null,"SJAG_01155":null,"SJAG_01192":null,"SJAG_01372":null,"SJAG_01786":null,"SJAG_01841":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03173":null,"SJAG_03862":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04397":null,"SJAG_04515":null,"SJAG_04944":null,"SJAG_04984":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"heme biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:HEMESYN2-PWY","Reactome:R-HSA-189451"],"synonyms":[{"name":"haem biosynthesis","type":"exact"},{"name":"haem biosynthetic process","type":"exact"},{"name":"heme anabolism","type":"exact"},{"name":"heme biosynthesis","type":"exact"},{"name":"heme formation","type":"exact"},{"name":"heme synthesis","type":"exact"}],"termid":"GO:0006783","terms_by_termid":{"GO:0006782":null,"GO:0006783":null,"GO:0006784":null,"GO:0019354":null}}


id: PBO:0057414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548o-2","termid":"PBO:0057414"}


id: GO:0060234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The negative regulation of cell adhesion process in which a neuroblast splits off of a neurectodermal sheet.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delamination","termid":"GO:0060232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"neuroblast delamination","termid":"GO:0060234"}


id: MONDO:1012179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myoclonus epilepsy of Lafora, non-human animal","termid":"MONDO:1011627"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myoclonus epilepsy of Lafora, domestic cat","secondary_identifiers":["OMIA:000690-9685"],"termid":"MONDO:1012179","xrefs":{"Monarch":{"xref_id":"1012179"}}}


id: PBO:0120175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the DSC ubiquitin ligase complex; involved in the endosome and Golgi-associated degradation pathway (EGAD), contributing to proteostasis and lipid homeostasis; localizes to the ER and vacuole lumen; overexpression affects endocytic protein trafficking; ortholog of fission yeast dsc3","termid":"PBO:0120175"}


id: PBO:0055647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3086","termid":"PBO:0055647"}


id: PR:O60160
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- omh1 gene.","definition_xrefs":["UniProtKB:O60160","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycoside alpha-1,2-mannosyltransferase omh1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C7.12c","synonyms":[{"name":"Spom972h-omh1","type":"exact"}],"termid":"PR:O60160"}


id: PATO:0000700
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A texture quality inhering in a bearer by virtue of the bearer's irregular surface.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"texture","termid":"PATO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rough","secondary_identifiers":["PATO:0001616"],"synonyms":[{"name":"coarse","type":"exact"}],"termid":"PATO:0000700"}


id: GO:0019119
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenanthrene-9,10-oxide + H2O = trans-9,10-dihydrodiolphenanthrene.","definition_xrefs":["GOC:mah","UM-BBD_reactionID:r0496","UM-BBD_reactionID:r0560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenanthrene-epoxide hydrolase activity","termid":"GO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"phenanthrene-9,10-epoxide hydrolase activity","termid":"GO:0019119"}


id: GO:0030848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3S)-3-hydroxy-L-aspartate = NH4 + oxaloacetate.","definition_xrefs":["EC:4.3.1.16","RHEA:12424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"threo-3-hydroxyaspartate ammonia-lyase activity","secondary_identifiers":["KEGG_REACTION:R05758","MetaCyc:4.3.1.16-RXN"],"synonyms":[{"name":"3-hydroxyaspartate dehydratase activity","type":"broad"},{"name":"L-threo-3-hydroxyaspartate dehydratase activity","type":"related"},{"name":"threo-3-hydroxy-L-aspartate ammonia-lyase (oxaloacetate-forming)","type":"related"},{"name":"threo-3-hydroxy-L-aspartate ammonia-lyase activity","type":"related"},{"name":"threo-3-hydroxyaspartate dehydratase activity","type":"related"}],"termid":"GO:0030848"}


id: PBO:0079997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 35","termid":"PBO:0079997"}


id: PBO:0084498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein of unknown function; required for spore wall formation during sporulation; dispensable for both nuclear divisions during meiosis","termid":"PBO:0084498"}


id: GO:0052242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism in response to a specific chemical concentration gradient within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete chemotaxis in other organism involved in symbiotic interaction (obsolete GO:0052242)","synonyms":[{"name":"chemotaxis in other organism during symbiotic interaction","type":"related"},{"name":"chemotaxis within other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0052242"}


id: PBO:0064265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology and FYVE domain containing 1","termid":"PBO:0064265"}


id: MONDO:1040003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurodevelopmental disorder caused by variation in the KCND2 gene. This disorder is characterized by early-onset global developmental delay with impaired motor, speech and cognitive development. Patients often present muscle hypotonia, and less frequently, developmental epileptic encephalopathy, visual impairment and physical dysmorphisms.","definition_xrefs":["PMID:34245260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"KCND2-related neurodevelopmental disorder with or without seizures","termid":"MONDO:1040003","xrefs":{"Monarch":{"xref_id":"1040003"}}}


id: MONDO:0008014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nondisjunction","secondary_identifiers":["MEDGEN:320427","UMLS:C1834741","OMIM:158250"],"synonyms":[{"name":"mixoploidy, familial","type":"related"},{"name":"mosaicism, chromosomal","type":"related"},{"name":"nondisjunction","type":"exact"}],"termid":"MONDO:0008014","xrefs":{"Monarch":{"xref_id":"0008014"}}}


id: PBO:0071601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 18","termid":"PBO:0071601"}


id: SO:0005836
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence that is involved in the control of a biological process.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_member_region","termid":"SO:0000831"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory_region","secondary_identifiers":["http://en.wikipedia.org/wiki/Regulatory_region"],"synonyms":[{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:other","type":"exact"},{"name":"regulatory region","type":"exact"}],"termid":"SO:0005836"}


id: PBO:0061679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUP93 divergent transcript","termid":"PBO:0061679"}


id: PBO:0087121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RING finger ubiquitin ligase (E3); subunit of ribosome-associated quality control trigger complex (RQT); involved in ubiquitination and degradation of excess histones; interacts with Ubc4p and Rad53p; required to trigger ribosome-associated quality control (RQC) and canonical no-go decay; ubiquitinates Rps20 and Rps3; binds to ribosomal RNA, mRNA and tRNA","termid":"PBO:0087121"}


id: PBO:0084403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lysine permease; one of three amino acid permeases (Alp1p, Can1p, Lyp1p) responsible for uptake of cationic amino acids","termid":"PBO:0084403"}


id: PBO:0047245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 237 member A","termid":"PBO:0047245"}


id: PBO:0042994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHEK2 pseudogene 7","termid":"PBO:0042994"}


id: MONDO:0018411
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of rare female infertility due to hypothalamic-pituitary-gonadal axis disorder that is caused by a modification of the individual's genome.","definition_xrefs":["MONDO:patterns/genetic"],"gene_count":0,"genotype_count":0,"name":"obsolete rare female infertility due to hypothalamic-pituitary-gonadal axis disorder of genetic origin (obsolete MONDO:0018411)","secondary_identifiers":["Orphanet:400011"],"synonyms":[{"name":"genetic rare female infertility due to hypothalamic-pituitary-gonadal axis disorder","type":"exact"},{"name":"rare female infertility due to gonadotropic axis disorder of genetic origin","type":"exact"},{"name":"rare female infertility due to hypothalamic-pituitary-testicular axis disorder of genetic origin","type":"exact"}],"termid":"MONDO:0018411","xrefs":{"Monarch":{"xref_id":"0018411"}}}


id: PBO:0001718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OB fold","termid":"PBO:0001718"}


id: PBO:0059862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitoregulin","termid":"PBO:0059862"}


id: MONDO:0044324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Al Kaissi syndrome is an autosomal recessive developmental disorder characterized by growth retardation, spine malformation, particularly of the cervical spine, dysmorphic facial features, and delayed psychomotor development with moderate to severe intellectual disability (summary by {1:Windpassinger et al., 2017}).","definition_xrefs":["OMIM:617694"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive syndromic intellectual disability","termid":"MONDO:0100598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Al Kaissi syndrome","secondary_identifiers":["MEDGEN:1611968","UMLS:C4540156"],"synonyms":[{"name":"AL KAISSI syndrome","type":"related"},{"name":"ALKAS","type":"related"},{"name":"Growth retardation, spine malformation, dysmorphic facies, and developmental delay","type":"related"}],"termid":"MONDO:0044324","xrefs":{"Monarch":{"xref_id":"0044324"}}}


id: PBO:0068674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 55, pseudogene","termid":"PBO:0068674"}


id: PBO:0041546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 18 putative open reading frame 15","termid":"PBO:0041546"}


id: PBO:0056693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis/spermiogenesis associated 1","termid":"PBO:0056693"}


id: MONDO:0003824
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited condition characterized by the development of kidney oncocytomas which are often bilateral and multifocal. This condition may be connected to Birt-Hogg-Dube syndrome.","definition_xrefs":["NCIT:C8960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney oncocytoma","termid":"MONDO:0003825"},{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"hereditary kidney oncocytoma","secondary_identifiers":["UMLS:C0879606","DOID:6244","MEDGEN:209307"],"synonyms":[{"name":"familial renal oncocytoma","type":"exact"},{"name":"hereditary kidney oncocytoma","type":"exact"},{"name":"hereditary renal oncocytoma","type":"exact"}],"termid":"MONDO:0003824","xrefs":{"Monarch":{"xref_id":"0003824"}}}


id: GO:0001019
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a DNA region that controls transcription by a plastid RNA polymerase. Binding may occur as a sequence specific interaction or as an interaction observed only once a factor has been recruited to the DNA by other factors.","definition_xrefs":["GOC:vw","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription cis-regulatory region binding","termid":"GO:0000976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0000976"}],"interesting_parent_ids":["GO:0000976","GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"plastid promoter transcription regulatory region sequence-specific DNA binding","termid":"GO:0001019"}


id: PBO:0108912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAG1 cohesin complex component","termid":"PBO:0108912"}


id: PBO:0028151
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spliceosomal_complex_assembly","termid":"PBO:0028151"}


id: PBO:0046552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group H member 6","termid":"PBO:0046552"}


id: GO:1900805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of brevianamide F. Brevianamide F is the biosynthetic precursor of a large family of biologically active prenylated tryptophan-proline 2,5-diketopiperazines that are produced by some fungi.","definition_xrefs":["PMID:16755625","GOC:TermGenie","GOC:di","PMID:17464044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole alkaloid biosynthetic process","termid":"GO:0035835"},{"relation_name":"is_a","term_name":"indole-containing compound biosynthetic process","termid":"GO:0042435"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"brevianamide F biosynthetic process","secondary_identifiers":["GO:1900803"],"synonyms":[{"name":"C16H17N3O2 anabolism","type":"related"},{"name":"C16H17N3O2 biosynthesis","type":"related"},{"name":"C16H17N3O2 biosynthetic process","type":"related"},{"name":"C16H17N3O2 formation","type":"related"},{"name":"C16H17N3O2 synthesis","type":"related"},{"name":"L-prolyl-L-tryptophan anhydride anabolism","type":"related"},{"name":"L-prolyl-L-tryptophan anhydride biosynthesis","type":"related"},{"name":"L-prolyl-L-tryptophan anhydride biosynthetic process","type":"related"},{"name":"L-prolyl-L-tryptophan anhydride formation","type":"related"},{"name":"L-prolyl-L-tryptophan anhydride synthesis","type":"related"},{"name":"L-tryptophyl-L-proline cyclic anhydride anabolism","type":"related"},{"name":"L-tryptophyl-L-proline cyclic anhydride biosynthesis","type":"related"},{"name":"L-tryptophyl-L-proline cyclic anhydride biosynthetic process","type":"related"},{"name":"L-tryptophyl-L-proline cyclic anhydride formation","type":"related"},{"name":"L-tryptophyl-L-proline cyclic anhydride synthesis","type":"related"},{"name":"brevianamide F anabolism","type":"exact"},{"name":"brevianamide F biosynthesis","type":"exact"},{"name":"brevianamide F formation","type":"exact"},{"name":"brevianamide F metabolic process","type":"narrow"},{"name":"brevianamide F synthesis","type":"exact"},{"name":"cyclo-(Trp-Pro) anabolism","type":"related"},{"name":"cyclo-(Trp-Pro) biosynthesis","type":"related"},{"name":"cyclo-(Trp-Pro) biosynthetic process","type":"related"},{"name":"cyclo-(Trp-Pro) formation","type":"related"},{"name":"cyclo-(Trp-Pro) synthesis","type":"related"},{"name":"cyclo-L-Trp-L-Pro anabolism","type":"related"},{"name":"cyclo-L-Trp-L-Pro biosynthesis","type":"related"},{"name":"cyclo-L-Trp-L-Pro biosynthetic process","type":"related"},{"name":"cyclo-L-Trp-L-Pro formation","type":"related"},{"name":"cyclo-L-Trp-L-Pro synthesis","type":"related"},{"name":"cyclo-L-tryptophanyl-L-proline anabolism","type":"related"},{"name":"cyclo-L-tryptophanyl-L-proline biosynthesis","type":"related"},{"name":"cyclo-L-tryptophanyl-L-proline biosynthetic process","type":"related"},{"name":"cyclo-L-tryptophanyl-L-proline formation","type":"related"},{"name":"cyclo-L-tryptophanyl-L-proline synthesis","type":"related"},{"name":"tryptophan-proline diketopiperazine anabolism","type":"related"},{"name":"tryptophan-proline diketopiperazine biosynthesis","type":"related"},{"name":"tryptophan-proline diketopiperazine biosynthetic process","type":"related"},{"name":"tryptophan-proline diketopiperazine formation","type":"related"},{"name":"tryptophan-proline diketopiperazine synthesis","type":"related"}],"termid":"GO:1900805"}


id: PBO:0068128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 435","termid":"PBO:0068128"}


id: GO:0060310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of elastin catabolism, the chemical reactions and pathways resulting in the breakdown of elastin.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein catabolic process","termid":"GO:0042176"},{"relation_name":"is_a","term_name":"regulation of glycoprotein metabolic process","termid":"GO:1903018"},{"relation_name":"regulates","term_name":"elastin catabolic process","termid":"GO:0060309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"regulation of elastin catabolic process","synonyms":[{"name":"regulation of elastin breakdown","type":"related"},{"name":"regulation of elastin catabolism","type":"exact"},{"name":"regulation of elastin degradation","type":"exact"}],"termid":"GO:0060310"}


id: PBO:0078117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 6","termid":"PBO:0078117"}


id: PR:Q10369
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- snt1 gene.","definition_xrefs":["UniProtKB:Q10369","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C22E12.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.19","synonyms":[{"name":"Spom972h-snt1","type":"exact"}],"termid":"PR:Q10369"}


id: PBO:0111803
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-MIZ","termid":"PBO:0111803"}


id: GO:0048236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of plant spores derived from the products of meiosis. The spore gives rise to gametophytes.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sexual sporulation","termid":"GO:0034293"},{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"},{"relation_name":"is_a","term_name":"meiotic cell cycle","termid":"GO:0051321"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"plant-type sporogenesis","synonyms":[{"name":"plant spore formation","type":"exact"}],"termid":"GO:0048236"}


id: PBO:0058262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4640","termid":"PBO:0058262"}


id: PBO:0047361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 15","termid":"PBO:0047361"}


id: PBO:0003230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kip3 subfamily","termid":"PBO:0003230"}


id: MONDO:0012391
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Progressive epilepsy-intellectual deficit, Finnish type (also known as Northern epilepsy) is a subtype of neuronal ceroid lipofuscinosis (NCL) characterized by seizures, progressive decline of intellectual capacities and variable loss of vision.","definition_xrefs":["Orphanet:1947"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile myoclonic epilepsy","termid":"MONDO:0009696"},{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis 8","termid":"MONDO:0010830"},{"relation_name":"is_a","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"},{"relation_name":"is_a","term_name":"progressive myoclonus epilepsy","termid":"MONDO:0020074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0002525","MONDO:0005066","MONDO:0002039","MONDO:0005027","MONDO:0005559"],"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis 8 northern epilepsy variant","secondary_identifiers":["GARD:4010","Orphanet:530298","ICD10CM:G40.3","MEDGEN:355328","OMIM:610003","UMLS:C1864923","DOID:0110724"],"synonyms":[{"name":"CLN8","type":"related"},{"name":"CLN8 disease, EPMR (subtype)","type":"related"},{"name":"CLN8 disease, Northern epilepsy variant","type":"exact"},{"name":"CLN8 disease, late infantile (subtype)","type":"related"},{"name":"EPMR","type":"exact"},{"name":"NCL, Northern epilepsy variant","type":"exact"},{"name":"Northern epilepsy","type":"exact"},{"name":"ceroid lipofuscinosis neuronal 8","type":"related"},{"name":"ceroid lipofuscinosis, neuronal, 8, NORTHERN epilepsy variant","type":"related"},{"name":"early onset familial encephalopathy with neuroserpin inclusion bodies","type":"exact"},{"name":"epilepsy mental deterioration Finnish type","type":"related"},{"name":"epilepsy, progressive, with intellectual disability","type":"related"},{"name":"epilepsy, progressive, with mental retardation","type":"related"},{"name":"neuronal ceroid lipofuscinosis 8","type":"related"},{"name":"neuronal ceroid lipofuscinosis, Northern epilepsy variant","type":"exact"},{"name":"northern epilepsy variant, neuronal ceroid lipofuscinosis, Northern epilepsy variant","type":"exact"},{"name":"progressive epilepsy - intellectual disability, Finnish type","type":"related"},{"name":"progressive epilepsy with intellectual disability, northern epilepsy","type":"exact"},{"name":"progressive epilepsy with mental retardation, northern epilepsy","type":"exact"},{"name":"progressive epilepsy-intellectual disability syndrome, Finnish type","type":"exact"},{"name":"progressive myoclonic epilepsy with neuroserpin inclusion bodies","type":"exact"}],"termid":"MONDO:0012391","xrefs":{"Monarch":{"xref_id":"0012391"}}}


id: GO:0009568
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Plant storage body for amylose and amylopectin, 1-100um in diameter, and located in amyloplasts. Also contains small amounts of enzymes, amino acids, lipids and nucleic acids. The shape of the grain varies widely amongst species, but is often spherical or disk-shaped.","definition_xrefs":["PMID:11217978","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"starch grain","termid":"GO:0043036"},{"relation_name":"part_of","term_name":"amyloplast","termid":"GO:0009501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"amyloplast starch grain","synonyms":[{"name":"amyloplast starch granule","type":"exact"}],"termid":"GO:0009568"}


