# terms

id: PBO:0031352
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_respiration","termid":"PBO:0031352"}


id: MONDO:0004886
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"choroidal sclerosis","termid":"MONDO:0004885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005328"],"is_obsolete":false,"name":"diffuse secondary choroid atrophy","secondary_identifiers":["MEDGEN:509702","SCTID:193463006","UMLS:C0154892","DOID:981","ICD9:363.42"],"termid":"MONDO:0004886","xrefs":{"Monarch":{"xref_id":"0004886"}}}


id: GO:0015051
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with an opioid to initiate a change in cell activity, with the pharmacological characteristics of X-opioid receptors.","definition_xrefs":["InterPro:IPR001420"],"gene_count":0,"genotype_count":0,"name":"obsolete X-opioid receptor activity (obsolete GO:0015051)","synonyms":[{"name":"X-opioid receptor activity","type":"exact"}],"termid":"GO:0015051"}


id: PATO:0002422
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Pertaining to the individual parts making up an aggregate fruit like a many-lobed \\\"berry,\\\" such as a raspberry.","definition_xrefs":["wikipedia:https://en.wikipedia.org/wiki/Acinus"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acinar","termid":"PATO:0002422"}


id: PBO:0026851
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromatin_at_ncRNA_gene","termid":"PBO:0026851"}


id: GO:0015700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of arsenite into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"arsenite transport","termid":"GO:0015700"}


id: GO:1903856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cytokinin dehydrogenase activity.","definition_xrefs":["PMID:25535363","GOC:TermGenie","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cytokinin dehydrogenase activity (obsolete GO:1903856)","synonyms":[{"name":"regulation of 6-N-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"regulation of N6-dimethylallyladenine:(acceptor) oxidoreductase activity","type":"exact"},{"name":"regulation of N6-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"regulation of cytokinin oxidase activity","type":"related"}],"termid":"GO:1903856"}


id: PBO:0060283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain gene cluster antisense RNA","termid":"PBO:0060283"}


id: MONDO:0001073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polyneuropathy","termid":"MONDO:0001824"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"idiopathic progressive polyneuropathy","secondary_identifiers":["MEDGEN:509646","UMLS:C0154756","SCTID:33209009","DOID:10593","ICD9:356.4"],"termid":"MONDO:0001073","xrefs":{"Monarch":{"xref_id":"0001073"}}}


id: PBO:0050759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 21","termid":"PBO:0050759"}


id: GO:0001703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A gastrulation process in which the initial invagination becomes the mouth and the anus forms second.","definition_xrefs":["GOC:mtg_sensu","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastrulation","termid":"GO:0007369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gastrulation with mouth forming first","synonyms":[{"name":"protostomic gastrulation","type":"narrow"}],"termid":"GO:0001703"}


id: PBO:0045187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member B6","termid":"PBO:0045187"}


id: PBO:0083184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the Ty1 long terminal repeat, YPRWdelta12","termid":"PBO:0083184"}


id: MONDO:1010880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neuronal ceroid lipofuscinosis that occurs in cats due to a mutation in the CLN6 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, domestic cat","termid":"MONDO:1011571"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, CLN6-related, domestic cat","secondary_identifiers":["OMIA:001443-9685"],"synonyms":[{"name":"CLN6","type":"exact"},{"name":"neuronal ceroid lipofuscinosis, 6, domestic cat","type":"related"}],"termid":"MONDO:1010880","xrefs":{"Monarch":{"xref_id":"1010880"}}}


id: GO:0071309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a phylloquinone (vitamin K1) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to phylloquinone","termid":"GO:0032573"},{"relation_name":"is_a","term_name":"cellular response to vitamin K","termid":"GO:0071307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to phylloquinone","synonyms":[{"name":"cellular response to vitamin K1","type":"exact"}],"termid":"GO:0071309"}


id: PBO:0089157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"traub family protein involved in ribosome biogenesis","termid":"PBO:0089157"}


id: PBO:0116859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histones H3-H4 binding DNAJ domain protein, DNAJC9 family, Djc9","termid":"PBO:0116859"}


id: PBO:0033744
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_linear_minichromosome_loss_during_vegetative_growth","termid":"PBO:0033744"}


id: MONDO:0020460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acquired von Willebrand syndrome (AVWS) is a bleeding disorder marked by the same biological anomalies as those seen in hereditary von Willebrand disease (VWD) but which occurs in association with another underlying pathology, generally in elderly patients without any personal or family history of bleeding anomalies.","definition_xrefs":["Orphanet:99147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"},{"relation_name":"is_a","term_name":"acquired coagulation factor deficiency","termid":"MONDO:0020599"},{"relation_name":"is_a","term_name":"von Willebrand disease (hereditary or acquired)","termid":"MONDO:0024574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"acquired von willebrand syndrome","secondary_identifiers":["DOID:0111146","GARD:5573","NANDO:1200899","UMLS:C0272362","SCTID:234451005","PMID:28028990","MEDGEN:543999","MedDRA:10069495"],"synonyms":[{"name":"AVWS","type":"exact"},{"name":"Willebrand disease, acquired","type":"related"},{"name":"acquired von Willebrand disease","type":"exact"},{"name":"acquired von Willebrand disease (hereditary or acquired)","type":"exact"},{"name":"acquired von willebrand disease","type":"exact"}],"termid":"MONDO:0020460","xrefs":{"Monarch":{"xref_id":"0020460"}}}


id: GO:0047977
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (5Z,9E,14Z)-(8x,11R,12S)-11,12-epoxy-8-hydroxyicosa-5,9,14-trienoate + H2O = (5Z,9E,14Z)-(8x,11x,12S)-8,11,12-trihydroxyicosa-5,9,14-trienoate.","definition_xrefs":["MetaCyc:HEPOXILIN-EPOXIDE-HYDROLASE-RXN","EC:3.3.2.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epoxide hydrolase activity","termid":"GO:0004301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"hepoxilin-epoxide hydrolase activity","secondary_identifiers":["RHEA:16665","Reactome:R-HSA-2161949"],"synonyms":[{"name":"(5Z,9E,14Z)-(8xi,11R,12S)-11,12-epoxy-8-hydroxyicosa-5,9,14-trienoate hydrolase activity","type":"related"},{"name":"hepoxilin A(3) hydrolase activity","type":"related"},{"name":"hepoxilin A3 hydrolase activity","type":"related"},{"name":"hepoxilin epoxide hydrolase activity","type":"related"},{"name":"hepoxylin hydrolase activity","type":"related"}],"termid":"GO:0047977"}


id: MONDO:1010689
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"AA amyloidosis that occurs in Sumatran tiger.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AA amyloidosis, non-human animal","termid":"MONDO:1010092"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AA amyloidosis, Sumatran tiger","secondary_identifiers":["OMIA:000038-9695"],"termid":"MONDO:1010689","xrefs":{"Monarch":{"xref_id":"1010689"}}}


id: PBO:0080814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-ray repair cross complementing 6 pseudogene 4","termid":"PBO:0080814"}


id: PBO:0050171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 27","termid":"PBO:0050171"}


id: FYPO:0003390
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found at the medial cortex is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"protein mislocalized to medial cortex during vegetative growth","synonyms":[{"name":"ectopic protein localization to medial cortex during vegetative growth","type":"exact"},{"name":"protein mislocalised to medial cortex during vegetative growth","type":"exact"},{"name":"protein mislocalized to medial cortex during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003390"}


id: PATO:0000643
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's bodily structure that has protruded through an abnormal opening in the wall that contains it.","definition_xrefs":["spinalstenosis:spinalstenosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protruding","termid":"PATO:0001598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"herniated","termid":"PATO:0000643"}


id: GO:0003176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the aortic valve over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"semi-lunar valve development","termid":"GO:1905314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aortic valve development","termid":"GO:0003176"}


id: MONDO:0000518
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chordoma (disease) that involves the fused sacrum.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vertebral column disorder","termid":"MONDO:0000812"},{"relation_name":"is_a","term_name":"spinal chordoma","termid":"MONDO:0002894"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sacrum chordoma","secondary_identifiers":["UMLS:C3164279","DOID:0050900","SCTID:447730004","MEDGEN:756688","NCIT:C129927"],"synonyms":[{"name":"chordoma (disease) of fused sacrum","type":"exact"},{"name":"fused sacrum chordoma (disease)","type":"exact"}],"termid":"MONDO:0000518","xrefs":{"Monarch":{"xref_id":"0000518"}}}


id: GO:0070020
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that consists of a dimeric transforming growth factor beta (TGF-beta) type II receptor bound to a TGF-beta1 dimer.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta1-type II receptor complex (obsolete GO:0070020)","synonyms":[{"name":"TGF-beta receptor II-TGF-beta1 complex","type":"exact"},{"name":"TGF-beta1-type II receptor complex","type":"exact"}],"termid":"GO:0070020"}


id: MONDO:0012758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial prostate cancer in which the cause of the disease is a mutation in the MSMB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostate cancer, hereditary","termid":"MONDO:0700275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate cancer, hereditary, 13","secondary_identifiers":["GARD:15534","MESH:C567456","OMIM:611928","MEDGEN:383198","UMLS:C2677821"],"synonyms":[{"name":"HPC13","type":"related"},{"name":"MSMB familial prostate cancer","type":"exact"},{"name":"familial prostate cancer caused by mutation in MSMB","type":"exact"},{"name":"prostate cancer, hereditary, 13","type":"exact"},{"name":"prostate cancer, hereditary, type 13","type":"exact"}],"termid":"MONDO:0012758","xrefs":{"Monarch":{"xref_id":"0012758"}}}


id: PBO:0048199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit alpha3","termid":"PBO:0048199"}


id: PBO:0063213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCCA antisense RNA 1","termid":"PBO:0063213"}


id: PBO:0090914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Sak1","termid":"PBO:0090914"}


id: PBO:0080665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP four-disulfide core domain 10B","termid":"PBO:0080665"}


id: PBO:0076158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUGT1 pseudogene 2","termid":"PBO:0076158"}


id: GO:0140783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (M)-viriditoxin, a fungal secondary metabolite with antibacterial activity.","definition_xrefs":["PMID:31045362","PMID:31304040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"(M)-viriditoxin biosynthetic process","synonyms":[{"name":"(M)-viriditoxin anabolism","type":"exact"},{"name":"(M)-viriditoxin biosynthesis","type":"exact"},{"name":"(M)-viriditoxin formation","type":"exact"},{"name":"(M)-viriditoxin synthesis","type":"exact"},{"name":"viriditoxin anabolism","type":"broad"},{"name":"viriditoxin biosynthesis","type":"broad"},{"name":"viriditoxin formation","type":"broad"},{"name":"viriditoxin synthesis","type":"broad"}],"termid":"GO:0140783"}


id: _global:positively_regulated_by
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"inverse of positively regulates","direct_ancestors":[{"relation_name":"is_a","term_name":"regulated_by","termid":"_global:regulated_by"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"positively_regulated_by","secondary_identifiers":["RO:0002336"],"termid":"_global:positively_regulated_by"}


id: PATO:0001862
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fertility quality inhering in a bearer by virtue of the bearer's disposition to make its offspring sterile.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fertility","termid":"PATO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lack of fertility in offspring","synonyms":[{"name":"grandchildless","type":"related"}],"termid":"PATO:0001862"}


id: MONDO:0006371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pineocytoma (obsolete MONDO:0006371)","termid":"MONDO:0006371","xrefs":{"Monarch":{"xref_id":"0006371"}}}


id: PBO:0060839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofilament heavy chain","termid":"PBO:0060839"}


id: GO:0048340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the paraxial mesoderm are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesoderm morphogenesis","termid":"GO:0048332"},{"relation_name":"is_a","term_name":"mesenchyme morphogenesis","termid":"GO:0072132"},{"relation_name":"part_of","term_name":"paraxial mesoderm development","termid":"GO:0048339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"paraxial mesoderm morphogenesis","termid":"GO:0048340"}


id: MONDO:0018139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete scleredema (obsolete MONDO:0018139)","termid":"MONDO:0018139","xrefs":{"Monarch":{"xref_id":"0018139"}}}


id: GO:0030087
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete PSII associated light-harvesting complex II, core complex, LHCIIc subcomplex (obsolete GO:0030087)","synonyms":[{"name":"PSII associated light-harvesting complex II, core complex, LHCIIc subcomplex","type":"exact"}],"termid":"GO:0030087"}


id: GO:0035940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of peptidase activity, the catalysis of the hydrolysis of peptide bonds in a protein, in a second organism.","definition_xrefs":["GOC:klp","PMID:10595640"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of peptidase activity in other organism (obsolete GO:0035940)","synonyms":[{"name":"down regulation of peptidase activity in other organism","type":"exact"},{"name":"down-regulation of protease activity in other organism","type":"narrow"},{"name":"downregulation of peptidase activity in other organism","type":"exact"},{"name":"inhibition of protease activity in other organism","type":"narrow"},{"name":"negative regulation of protease activity in other organism","type":"narrow"}],"termid":"GO:0035940"}


id: MONDO:0010679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Duchenne muscular dystrophy (DMD) is a neuromuscular disease characterized by rapidly progressive muscle weakness and wasting due to degeneration of skeletal, smooth and cardiac muscle.","definition_xrefs":["Orphanet:98896"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"is_a","term_name":"DMD-related muscular dystrophy","termid":"MONDO:0700285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"Duchenne muscular dystrophy","secondary_identifiers":["NANDO:2200856","NCIT:C75482","MEDGEN:3925","NORD:1065","OMIM:310200","MESH:D020388","DOID:11723","icd11.foundation:1479561744","SCTID:76670001","UMLS:C0013264","MedDRA:10013801","GARD:6291","NANDO:1200488"],"synonyms":[{"name":"DMD","type":"exact"},{"name":"Duchenne muscular dystrophy","type":"exact"},{"name":"Duchenne muscular dystrophy, X-linked recessive","type":"exact"},{"name":"muscular dystrophy, Duchenne","type":"exact"},{"name":"muscular dystrophy, Duchenne type","type":"related"},{"name":"muscular dystrophy, pseudohypertrophic progressive, Duchenne type","type":"related"},{"name":"severe dystrophinopathy, Duchenne type","type":"exact"}],"termid":"MONDO:0010679","xrefs":{"Monarch":{"xref_id":"0010679"}}}


id: GO:0015468
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Plasmid-encoded bacteriocins which are produced by enteric bacteria. Exert a lethal effect on other bacteria including E. coli strains that lack the Col plasmid. Bind to a cell surface receptor and are transported into the periplasm via an energy-dependent process involving a TonB- or TolA-dependent hetero-oligomeric protein complex. Some colicins kill their target cell by inserting into the cytoplasmic membrane where they form voltage-sensitive (trans-negative) channels that depolarize and deenergize the cell, and thereby kill it.","definition_xrefs":["TC:1.C.1.-.-"],"gene_count":0,"genotype_count":0,"name":"obsolete colicin (obsolete GO:0015468)","synonyms":[{"name":"colicin","type":"exact"}],"termid":"GO:0015468"}


id: PBO:0034676
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_frequency_of_meiotic_crossover_associated_with_gene_conversion","termid":"PBO:0034676"}


id: PBO:0017824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF2 family ATP-dependent DNA helicase Swr1","termid":"PBO:0017824"}


id: SO:0001167
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non directional promoter motif with consensus CGMYGYCR.","definition_xrefs":["PMID:16827941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"},{"relation_name":"part_of","term_name":"RNApol_II_promoter","termid":"SO:0000170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDM2_motif","synonyms":[{"name":"NDM2","type":"exact"},{"name":"NDM2 motif","type":"exact"},{"name":"non directional promoter motif 2","type":"exact"}],"termid":"SO:0001167"}


id: PBO:0063217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 7","termid":"PBO:0063217"}


id: PBO:0000622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit Taf111","termid":"PBO:0000622"}


id: GO:0035125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the embryo, by which the anatomical structures of the embryonic anal fin are generated and organized. An anal fin is an unpaired medial fin on the ventral aspect near the caudal end of a fish, which provides lateral stability while swimming.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic medial fin morphogenesis","termid":"GO:0035122"},{"relation_name":"is_a","term_name":"anal fin morphogenesis","termid":"GO:0035144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic anal fin morphogenesis","termid":"GO:0035125"}


id: PBO:0073967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 16","termid":"PBO:0073967"}


id: PBO:0085034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Noncatalytic subunit of a tRNA methyltransferase complex; Trm8p and Trm82p comprise an enzyme that catalyzes a methyl-transfer from S-adenosyl-l-methionine to the N(7) atom of guanine at position 46 in tRNA; Trm8 lacks catalytic activity if not bound to Trm82p; relocalizes to the cytosol in response to hypoxia; mutation in human ortholog WDR4 causes microcephalic primordial dwarfism","termid":"PBO:0085034"}


id: PBO:0090720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic ATP-dependent RNA helicase Dbp5","termid":"PBO:0090720"}


id: GO:0097340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that prevents the activation of an inactive cysteine-type endopeptidase.","definition_xrefs":["PMID:20383739","GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete inhibition of cysteine-type endopeptidase activity (obsolete GO:0097340)","synonyms":[{"name":"inhibition of caspase activity","type":"narrow"},{"name":"prevention of caspase activity","type":"narrow"},{"name":"prevention of cysteine-type endopeptidase activity","type":"exact"}],"termid":"GO:0097340"}


id: GO:0051667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a plastid to a specific location in the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid localization","termid":"GO:0051644"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"establishment of organelle localization","termid":"GO:0051656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of plastid localization","synonyms":[{"name":"establishment of plastid localisation","type":"exact"}],"termid":"GO:0051667"}


id: GO:0010442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation and organization of the polarized cell that is capable of turgor driven movement.","definition_xrefs":["GOC:expert_db","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"is_a","term_name":"post-embryonic plant morphogenesis","termid":"GO:0090698"},{"relation_name":"part_of","term_name":"guard cell development","termid":"GO:0010441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"guard cell morphogenesis","synonyms":[{"name":"guard cell morphogenesis during differentiation","type":"exact"}],"termid":"GO:0010442"}


id: GO:0000003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The production of new individuals that contain some portion of genetic material inherited from one or more parent organisms.","definition_xrefs":["GOC:isa_complete","GOC:jl","ISBN:0198506732","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete reproduction (obsolete GO:0000003)","synonyms":[{"name":"reproductive physiological process","type":"exact"}],"termid":"GO:0000003"}


id: GO:0071835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of a mating pheromone, a peptide hormone that induces a behavioral or physiological response(s) from a responding organism or cell, that regulates the union or introduction of genetic information from compatible mating types that results in a genetically different individual. Conjugation requires direct cellular contact between the organisms.","definition_xrefs":["GOC:jh","GOC:mah","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating pheromone secretion","termid":"GO:0071834"},{"relation_name":"part_of","term_name":"conjugation with cellular fusion","termid":"GO:0000747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810","GO:0051179","GO:0000747"],"is_obsolete":false,"name":"mating pheromone secretion involved in regulation of conjugation with cellular fusion","secondary_identifiers":["GO:0071832"],"synonyms":[{"name":"mating pheromone secretion involved in regulation of conjugation","type":"related"},{"name":"mating-type pheromone secretion involved in conjugation","type":"exact"},{"name":"peptide pheromone export involved in regulation of conjugation","type":"broad"}],"termid":"GO:0071835"}


id: PBO:0067766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 66","termid":"PBO:0067766"}


id: MONDO:0035648
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myotonic dystrophy","termid":"MONDO:0016107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"juvenile-onset Steinert myotonic dystrophy","secondary_identifiers":["Orphanet:589827","GARD:22363","UMLS:C5680306","ICD10CM:G71.1","MEDGEN:1843227"],"synonyms":[{"name":"Juvenile-onset Steinert disease","type":"exact"},{"name":"Juvenile-onset myotonic dystrophy type 1","type":"exact"}],"termid":"MONDO:0035648","xrefs":{"Monarch":{"xref_id":"0035648"}}}


id: MONDO:1012904
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary neurological disease that occurs in white-tufted-ear marmoset due to a mutation in the FMR1 gene created by genetic engineering or gene editing.","definition_xrefs":["PMID:35626665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile X syndrome, FMR1-related, white-tufted-ear marmoset","secondary_identifiers":["OMIA:002455-9483"],"termid":"MONDO:1012904","xrefs":{"Monarch":{"xref_id":"1012904"}}}


id: MONDO:1010114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Phenylketonuria that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism, non-human animal","termid":"MONDO:1012979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenylketonuria, non-human animal","secondary_identifiers":["OMIA:002293"],"termid":"MONDO:1010114","xrefs":{"Monarch":{"xref_id":"1010114"}}}


id: PBO:0065932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rac family small GTPase 1 pseudogene 6","termid":"PBO:0065932"}


id: PBO:0039709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein A1","termid":"PBO:0039709"}


id: MONDO:0000289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete selective IgM deficiency disease (obsolete MONDO:0000289)","termid":"MONDO:0000289","xrefs":{"Monarch":{"xref_id":"0000289"}}}


id: GO:0019915
data:
  {"annotated_genes":["SJAG_03609","SJAG_01180","SJAG_03162","SJAG_02980","SJAG_04049","SJAG_01906","SJAG_04041","SJAG_04059","SJAG_01537","SJAG_02763"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91846,111575,121264],"is_not":false,"summary":null,"term":"GO:0019915"},{"annotations":[90580,116044,120759,63059,113915,112839,96462],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140042"}]},"cv_name":"biological_process","definition":"The accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development.","definition_xrefs":["GOC:tb","GOC:dph","PMID:11102830","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nutrient storage","termid":"GO:0170062"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01180":null,"SJAG_01537":null,"SJAG_01906":null,"SJAG_02763":null,"SJAG_02980":null,"SJAG_03162":null,"SJAG_03609":null,"SJAG_04041":null,"SJAG_04049":null,"SJAG_04059":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipid storage","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:26774782":null},"synonyms":[{"name":"lipid retention","type":"exact"},{"name":"lipid sequestering","type":"narrow"},{"name":"lipid sequestration","type":"narrow"},{"name":"retention of lipids","type":"exact"},{"name":"sequestering of lipids","type":"narrow"},{"name":"sequestration of lipid","type":"narrow"},{"name":"sequestration of lipids","type":"exact"},{"name":"storage of lipids","type":"exact"}],"termid":"GO:0019915","terms_by_termid":{"GO:0019915":null,"GO:0140042":null}}


id: MONDO:1011959
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth-hormone deficiency dwarfism,, non-human animal","secondary_identifiers":["OMIA:001473"],"termid":"MONDO:1011959","xrefs":{"Monarch":{"xref_id":"1011959"}}}


id: GO:0019907
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A cyclin-dependent kinase activating kinase complex capable of activating cyclin-dependent kinases by threonine phosphorylation, thus regulating cell cycle progression. consists of a kinase, cyclin and optional assembly factors, in human CDK7, CCNH and MNAT1. CAK activity is itself regulated throughout the cell cycle by T-loop phosphorylation of its kinase component (CDK7 in human). Phosphorylation of serine residues during mitosis inactivates the enzyme. Also capable of CAK phosphorylating the carboxyl-terminal domain (CTD) of RNA polymerase II and other transcription activating proteins, as part of the general transcription factor TFIIH.","definition_xrefs":["PMID:8752210","GOC:bhm"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclin-dependent protein kinase activating kinase holoenzyme complex (obsolete GO:0019907)","termid":"GO:0019907"}


id: FYPO:0007154
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the biosynthesis of polyphosphate is normal (i.e. indistinguishable from wild type) during a cellular response to replete phosphate.","definition_xrefs":["PMID:1318242","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal polyphosphate biosynthesis during cellular response to replete phosphate","synonyms":[{"name":"normal polyphosphate biosynthesis during cellular response to phosphate starvation during mitotic cell cycle","type":"related"},{"name":"normal polyphosphate biosynthesis during cellular response to replete phosphate during vegetative growth","type":"exact"},{"name":"normal polyphosphate biosynthetic process during cellular response to phosphate starvation","type":"exact"},{"name":"normal polyphosphate formation during cellular response to replete phosphate","type":"exact"}],"termid":"FYPO:0007154"}


id: PBO:0001663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Brix domain protein Rpf1 (predicted)","termid":"PBO:0001663"}


id: PBO:0087337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Specificity factor required for Rsp5p-dependent ubiquitination; also required for sorting of cargo proteins at the multivesicular body; identified as a high-copy suppressor of a SHR3 deletion, increasing steady-state levels of amino acid permeases","termid":"PBO:0087337"}


id: PBO:0061638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 16 like 2, pseudogene","termid":"PBO:0061638"}


id: GO:0015374
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neutral/basic amino acid(out) + Na+(out) + Cl-(out) = neutral/basic amino acid(in) + Na+(in) + Cl-(in).","definition_xrefs":["TC:2.A.22.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:sodium symporter activity","termid":"GO:0005283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"neutral, basic amino acid:sodium:chloride symporter activity","synonyms":[{"name":"neutral, cationic amino acid:sodium:chloride symporter activity","type":"related"}],"termid":"GO:0015374"}


id: PR:O74870
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug73 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74870"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 73 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC31H12.02c","synonyms":[{"name":"Spom972h-mug73","type":"exact"}],"termid":"PR:O74870"}


id: PBO:0004071
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.16","termid":"PBO:0004071"}


id: PBO:0043582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XIV alpha 1 chain","termid":"PBO:0043582"}


id: MONDO:0100189
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare lipoprotein metabolism disorder characterized biochemically by complete absence of apolipoprotein AI and extremely low plasma high density lipoprotein (HDL) cholesterol, and clinically by corneal opacities and xanthomas complicated with premature coronary heart disease (CHD).","definition_xrefs":["Orphanet:425"],"gene_count":0,"genotype_count":0,"name":"obsolete apolipoprotein A-I deficiency (obsolete MONDO:0100189)","secondary_identifiers":["NANDO:2200605"],"synonyms":[{"name":"ApoA-I deficiency","type":"exact"},{"name":"familial apoA-I deficiency","type":"exact"},{"name":"familial hypoalphalipoproteinemia","type":"exact"}],"termid":"MONDO:0100189","xrefs":{"Monarch":{"xref_id":"0100189"}}}


id: MONDO:0006449
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete testicular yolk sac tumor (obsolete MONDO:0006449)","termid":"MONDO:0006449","xrefs":{"Monarch":{"xref_id":"0006449"}}}


id: GO:0030157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of pancreatic juice by the exocrine pancreas into the upper part of the intestine. Pancreatic juice is slightly alkaline and contains numerous enzymes and inactive enzyme precursors including alpha-amylase, chymotrypsinogen, lipase, procarboxypeptidase, proelastase, prophospholipase A2, ribonuclease, and trypsinogen. Its high concentration of bicarbonate ions helps to neutralize the acid from the stomach.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"body fluid secretion","termid":"GO:0007589"},{"relation_name":"is_a","term_name":"digestive system process","termid":"GO:0022600"},{"relation_name":"is_a","term_name":"secretion by tissue","termid":"GO:0032941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"pancreatic juice secretion","termid":"GO:0030157"}


id: MONDO:0003474
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A variant of ependymoma, often found in the spinal cord, with tumor cells arranged in fascicles of variable width and cell density. Ependymal rosettes are generally absent, so this lesion must be distinguished from astrocytic neoplasms, but its EM characteristics are ependymal. (Adapted from WHO.)","definition_xrefs":["NCIT:C6903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ependymoma","termid":"MONDO:0016698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tanycytic ependymoma","secondary_identifiers":["DOID:5504","MEDGEN:237159","UMLS:C1370500"],"synonyms":[{"name":"tanycytic ependymoma","type":"exact"}],"termid":"MONDO:0003474","xrefs":{"Monarch":{"xref_id":"0003474"}}}


id: MONDO:0006042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bacterial infection of the membranes covering the brain and the spinal cord caused by Mycobacterium tuberculosis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tuberculous salpingitis","termid":"MONDO:0000271"},{"relation_name":"is_a","term_name":"central nervous system tuberculosis","termid":"MONDO:0005696"},{"relation_name":"is_a","term_name":"bacterial meningitis","termid":"MONDO:0006670"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meningeal tuberculosis","secondary_identifiers":["EFO:1000039","GARD:7828","MESH:D014390","Orphanet:499004","ICD10CM:A17.0","NCIT:C84888","UMLS:C0041318","SCTID:58437007","MEDGEN:21725","NORD:1437"],"synonyms":[{"name":"Meningitis, Tuberculous","type":"exact"},{"name":"TB meningitis","type":"exact"},{"name":"TBM","type":"exact"},{"name":"tubercular meningitis","type":"exact"},{"name":"tuberculous meningitis","type":"exact"}],"termid":"MONDO:0006042","xrefs":{"Monarch":{"xref_id":"0006042"}}}


id: FYPO:0005832
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein transport along microtubules to the cortex of the cell tip is abnormal. Transport of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah","GO:0099110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein transport along microtubule during vegetative growth","termid":"FYPO:0005830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein transport along microtubule to cell tip cortex during vegetative growth","synonyms":[{"name":"abnormal protein movement along microtubule to cell tip cortex during vegetative growth","type":"exact"},{"name":"abnormal protein transport along microtubule to cell cortex of cell tip during vegetative growth","type":"exact"},{"name":"abnormal protein transport along microtubule to cell tip cortex during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005832"}


id: PBO:0048573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gametogenetin","termid":"PBO:0048573"}


id: MONDO:0015014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coloboma, osteopetrosis, microphthalmia, macrocephaly, albinism, and deafness","secondary_identifiers":["GARD:18021","OMIM:617306","MEDGEN:934592","Orphanet:603494","UMLS:C4310625"],"synonyms":[{"name":"COMMAD","type":"exact"},{"name":"COMMAD syndrome","type":"exact"},{"name":"coloboma, osteopetrosis, microphthalmia, macrocephaly, albinism, and deafness","type":"exact"},{"name":"coloboma, osteopetrosis, microphthalmia, macrocephaly, albinism, and deafness; COMMAD","type":"exact"}],"termid":"MONDO:0015014","xrefs":{"Monarch":{"xref_id":"0015014"}}}


id: PBO:0041831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer susceptibility 6","termid":"PBO:0041831"}


id: GO:0031286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sorocarp stalk cell differentiation. An example of this process is found in Dictyostelium discoideum.","definition_xrefs":["PMID:4338436","GOC:kp","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sorocarp stalk cell differentiation","termid":"GO:0031285"},{"relation_name":"is_a","term_name":"negative regulation of response to nutrient levels","termid":"GO:0032108"},{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"negative regulation of spore-bearing organ development","termid":"GO:0075262"},{"relation_name":"negatively_regulates","term_name":"sorocarp stalk cell differentiation","termid":"GO:0031149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sorocarp stalk cell differentiation","synonyms":[{"name":"down regulation of stalk cell differentiation","type":"exact"},{"name":"down-regulation of stalk cell differentiation","type":"exact"},{"name":"downregulation of stalk cell differentiation","type":"exact"},{"name":"inhibition of stalk cell differentiation","type":"narrow"},{"name":"negative regulation of stalk cell differentiation","type":"exact"}],"termid":"GO:0031286"}


id: MONDO:0043123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"arthrogryposis","termid":"MONDO:0008779"},{"relation_name":"is_a","term_name":"lissencephaly spectrum disorders","termid":"MONDO:0018838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"massa casaer ceulemans syndrome","secondary_identifiers":["MESH:C536031","UMLS:C2931090","MEDGEN:418986","GARD:3407"],"synonyms":[{"name":"arthrogryposis multiplex congenita associated with lissencephaly","type":"related"}],"termid":"MONDO:0043123","xrefs":{"Monarch":{"xref_id":"0043123"}}}


id: PBO:0038956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adiponectin receptor 2","termid":"PBO:0038956"}


id: PBO:0073792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 5 member 12","termid":"PBO:0073792"}


id: MONDO:0014924
data:
  {"annotated_genes":["SJAG_02765"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88951],"is_not":false,"summary":null,"term":"MONDO:0014924"}]},"cv_name":"mondo","definition":"Any epilepsy, familial focal, with variable foci in which the cause of the disease is a mutation in the NPRL2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial focal epilepsy with variable foci","termid":"MONDO:0020310"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02765":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy, familial focal, with variable foci 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18203","OMIM:617116","DOID:0081422","UMLS:C4310709","MEDGEN:934676"],"synonyms":[{"name":"FFEVF2","type":"exact"},{"name":"NPRL2 epilepsy, familial focal, with variable foci","type":"exact"},{"name":"epilepsy, familial focal, with variable foci 2","type":"exact"},{"name":"epilepsy, familial focal, with variable foci 2; FFEVF2","type":"exact"},{"name":"epilepsy, familial focal, with variable foci caused by mutation in NPRL2","type":"exact"},{"name":"epilepsy, familial focal, with variable foci type 2","type":"exact"}],"termid":"MONDO:0014924","terms_by_termid":{"MONDO:0014924":null},"xrefs":{"Monarch":{"xref_id":"0014924"}}}


id: GO:1904863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of beta-catenin-TCF complex assembly.","definition_xrefs":["GOC:bf","GOC:PARL","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"beta-catenin-TCF complex assembly","termid":"GO:1904837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of beta-catenin-TCF complex assembly","synonyms":[{"name":"regulation of beta-catenin-TCF complex formation","type":"exact"},{"name":"regulation of beta-catenin/LEF complex assembly","type":"narrow"},{"name":"regulation of beta-catenin/LEF complex formation","type":"narrow"},{"name":"regulation of beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"regulation of beta-catenin/T-cell factor complex formation","type":"related"},{"name":"regulation of beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"regulation of beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"}],"termid":"GO:1904863"}


id: PBO:0069441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 706, pseudogene","termid":"PBO:0069441"}


id: MONDO:0008630
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urinary bladder, atony of","secondary_identifiers":["OMIM:191800","UMLS:C5231389","MEDGEN:1684829"],"synonyms":[{"name":"atony of urinary bladder","type":"exact"},{"name":"bladder dysfunction, autonomic, with impaired pupillary reflex and secondary CAKUT","type":"exact"},{"name":"urinary bladder, atony of","type":"exact"}],"termid":"MONDO:0008630","xrefs":{"Monarch":{"xref_id":"0008630"}}}


id: PBO:0065022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin 3 pseudogene 1","termid":"PBO:0065022"}


id: PBO:0053068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"layilin","termid":"PBO:0053068"}


id: PBO:0027148
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_farnesyltranstransferase_activity","termid":"PBO:0027148"}


id: PBO:0072686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUNDC3A antisense RNA 1","termid":"PBO:0072686"}


id: GO:0022841
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transport of a potassium ion across a membrane via a narrow pore channel that is open even in an unstimulated or 'resting' state.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel activity","termid":"GO:0005267"},{"relation_name":"is_a","term_name":"leak channel activity","termid":"GO:0022840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"potassium ion leak channel activity","termid":"GO:0022841"}


id: PBO:0091196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys","termid":"PBO:0091196"}


id: PBO:0052938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 22-2","termid":"PBO:0052938"}


id: PR:O14250
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit alpha type-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01345","PRO:DNx","PANTHER:PTHR11599:SF12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha type-6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G10.04c","secondary_identifiers":["UniProtKB:O14250"],"synonyms":[{"name":"Spom972h-PSMA1","type":"exact"}],"termid":"PR:O14250"}


id: MONDO:0005586
data:
  {"annotated_genes":["SJAG_03677","SJAG_03429","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"},{"annotations":[88524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"},{"annotations":[87667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008097"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the anatomic structures of the head and neck region. Representative examples of benign neoplasms include salivary gland pleomorphic adenoma and nasal cavity papilloma. Representative examples of malignant neoplasms include oral cavity squamous cell carcinoma, laryngeal squamous cell carcinoma, and salivary gland carcinoma.","definition_xrefs":["NCIT:C3077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03429":null,"SJAG_03453":null,"SJAG_03677":null},"genotype_count":0,"is_obsolete":false,"name":"head and neck neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:6728","EFO:0005950","ONCOTREE:HEADNECK","SCTID:255055008","UMLS:C0018671","ICD9:239.89"],"synonyms":[{"name":"craniocervical region neoplasm","type":"exact"},{"name":"craniocervical region neoplasm (disease)","type":"exact"},{"name":"craniocervical region tumor","type":"exact"},{"name":"craniocervical region tumour","type":"exact"},{"name":"head and neck neoplasm","type":"exact"},{"name":"head and neck neoplasm (excluding central nervous system)","type":"exact"},{"name":"head and neck tumor","type":"exact"},{"name":"head and neck tumour","type":"exact"},{"name":"neoplasm of craniocervical region","type":"exact"},{"name":"neoplasm of head and neck","type":"exact"},{"name":"neoplasm of the head and neck","type":"exact"},{"name":"tumor of craniocervical region","type":"exact"},{"name":"tumor of head and neck","type":"exact"},{"name":"tumor of the head and neck","type":"exact"},{"name":"tumour of craniocervical region","type":"exact"},{"name":"tumour of head and neck","type":"exact"},{"name":"tumour of the head and neck","type":"exact"}],"termid":"MONDO:0005586","terms_by_termid":{"MONDO:0008097":null,"MONDO:0009050":null,"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0005586"}}}


id: PBO:0083776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential nuclear protein; required for biogenesis of the small ribosomal subunit; has a possible role in the osmoregulatory glycerol response; putative homolog of human NOM1 which is implicated in acute myeloid leukemia","termid":"PBO:0083776"}


id: MONDO:0014761
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary pediatric Behçet-like disease (obsolete MONDO:0014761)","termid":"MONDO:0014761","xrefs":{"Monarch":{"xref_id":"0014761"}}}


id: GO:0046492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving heme b, a Fe(II) porphyrin complex readily isolated from the hemoglobin of beef blood, but also found in other proteins including other hemoglobins, myoglobins, cytochromes P-450, catalases, peroxidases as well as b type cytochromes.","definition_xrefs":["PMID:29414780","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme metabolic process","termid":"GO:0042168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"heme B metabolic process","synonyms":[{"name":"haem B metabolic process","type":"exact"},{"name":"haem B metabolism","type":"exact"},{"name":"heme B metabolism","type":"exact"},{"name":"protoheme metabolic process","type":"exact"},{"name":"protoheme metabolism","type":"exact"}],"termid":"GO:0046492"}


id: PBO:0080864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yip1 domain family member 5","termid":"PBO:0080864"}


id: PBO:0050212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 29","termid":"PBO:0050212"}


id: MONDO:0022893
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"craniosynostosis arthrogryposis cleft palate","secondary_identifiers":["GARD:1587"],"termid":"MONDO:0022893","xrefs":{"Monarch":{"xref_id":"0022893"}}}


id: GO:1904753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vascular associated smooth muscle cell migration.","definition_xrefs":["GOC:BHF","GOC:TermGenie","PMID:20693317","GOC:rph","GOC:BHF_miRNA","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of smooth muscle cell migration","termid":"GO:0014912"},{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell migration","termid":"GO:1904752"},{"relation_name":"negatively_regulates","term_name":"vascular associated smooth muscle cell migration","termid":"GO:1904738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vascular associated smooth muscle cell migration","synonyms":[{"name":"down regulation of vascular associated smooth muscle cell migration","type":"exact"},{"name":"down regulation of vascular smooth muscle cell migration","type":"exact"},{"name":"down-regulation of vascular associated smooth muscle cell migration","type":"exact"},{"name":"down-regulation of vascular smooth muscle cell migration","type":"exact"},{"name":"downregulation of vascular associated smooth muscle cell migration","type":"exact"},{"name":"downregulation of vascular smooth muscle cell migration","type":"exact"},{"name":"inhibition of vascular associated smooth muscle cell migration","type":"narrow"},{"name":"inhibition of vascular smooth muscle cell migration","type":"narrow"},{"name":"negative regulation of vascular smooth muscle cell migration","type":"exact"}],"termid":"GO:1904753"}


id: PBO:0085824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; expression is sensitive to nitrogen catabolite repression and regulated by Dal80p; contains transmembrane domain","termid":"PBO:0085824"}


id: PBO:0065644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 22","termid":"PBO:0065644"}


id: GO:0098552
data:
  {"annotated_genes":["SJAG_02435","SJAG_04732","SJAG_02173","SJAG_02605","SJAG_03596","SJAG_00438","SJAG_MIT37","SJAG_05204","SJAG_03282","SJAG_01307","SJAG_03328","SJAG_05207","SJAG_04122","SJAG_00985","SJAG_02916","SJAG_03114","SJAG_03056","SJAG_04483","SJAG_02260","SJAG_00218","SJAG_04238","SJAG_04851","SJAG_01242","SJAG_00334","SJAG_03925","SJAG_MIT15","SJAG_00415","SJAG_04789","SJAG_02989","SJAG_MIT09","SJAG_02105","SJAG_00096","SJAG_00437","SJAG_03081","SJAG_03464","SJAG_02598","SJAG_03204","SJAG_00747","SJAG_00109","SJAG_01806","SJAG_05268","SJAG_02265","SJAG_07003","SJAG_00915","SJAG_00133","SJAG_02163","SJAG_04666","SJAG_04509","SJAG_03640","SJAG_03311","SJAG_04077","SJAG_03764","SJAG_01249","SJAG_01950","SJAG_00605","SJAG_05272","SJAG_01029","SJAG_00254","SJAG_04821","SJAG_00797","SJAG_00754","SJAG_01290","SJAG_02233","SJAG_02444","SJAG_02564","SJAG_02587","SJAG_01940","SJAG_01260","SJAG_04583","SJAG_01086","SJAG_00340","SJAG_02196","SJAG_04850","SJAG_00368","SJAG_02102","SJAG_01178","SJAG_01835","SJAG_04026","SJAG_04363","SJAG_00542","SJAG_00310","SJAG_01134","SJAG_04685","SJAG_00077","SJAG_00836","SJAG_00554","SJAG_03345","SJAG_03656","SJAG_04018","SJAG_04209","SJAG_01774","SJAG_00852","SJAG_00784","SJAG_01738","SJAG_04952","SJAG_02093","SJAG_04875","SJAG_01312","SJAG_00948"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[61277,63362],"is_not":false,"summary":null,"term":"GO:0098552"},{"annotations":[111692,104116,77778,118596,96893,99589,100489,100149,115983,95709,109852,112853,107662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098554"},{"annotations":[92386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010009"},{"annotations":[101068,107625,107755,106641,91068,103161,104323,97909,108417,102343,119540,106286,117629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032473"},{"annotations":[91543,81514,112710,79971,94222,72444,77969,89696,100789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009898"},{"annotations":[108419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106186"},{"annotations":[96667,105818,114885,115597,116235,65243,96669,116611,118130,119203,119639,97094,96668,91737,116334,120651,104066,91931,104065,120214,95858,58769,108388,96655,117463,104058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009897"},{"annotations":[112387],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031234"},{"annotations":[105579,102272],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099616"},{"annotations":[75949,108327,82141,77039],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005834"},{"annotations":[111135,77777,100199,92186,101811,101599,92939,106835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098553"},{"annotations":[95089,105494,94663,104854,109734,106838,98068,117703,90942,109642,120947,91770,91308,96659,105468,95626,110626,95678,120941,120952,103634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099617"}]},"cv_name":"cellular_component","definition":"A cellular component consisting of one leaflet of a membrane bilayer and any proteins embedded or anchored in it or attached to its surface.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical 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of membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0098552","terms_by_termid":{"GO:0005834":null,"GO:0009897":null,"GO:0009898":null,"GO:0010009":null,"GO:0031234":null,"GO:0032473":null,"GO:0098552":null,"GO:0098553":null,"GO:0098554":null,"GO:0099616":null,"GO:0099617":null,"GO:0106186":null}}


id: GO:0023007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Binding of a diffusible ligand to a T cell receptor as part of a signaling process.","definition_xrefs":["GOC:mtg_signal","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete ligand binding to T cell receptor (obsolete GO:0023007)","synonyms":[{"name":"ligand binding to T cell receptor","type":"exact"}],"termid":"GO:0023007"}


id: PBO:0039711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein A2","termid":"PBO:0039711"}


id: PBO:0016124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced mating-type m-specific polypeptide Mc","termid":"PBO:0016124"}


id: MONDO:0014809
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary neoplastic syndrome in which the cause of the disease is a mutation in the DDX41 gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDX41-related hematologic malignancy predisposition syndrome","secondary_identifiers":["GARD:17899","MEDGEN:895780","OMIM:616871","UMLS:C4225174","Orphanet:488647"],"synonyms":[{"name":"DDX41 hereditary neoplastic syndrome","type":"exact"},{"name":"DDX41-related hematologic malignancy predisposition syndrome","type":"exact"},{"name":"MPLPF","type":"exact"},{"name":"hereditary neoplastic syndrome caused by mutation in DDX41","type":"exact"},{"name":"myeloproliferative/lymphoproliferative neoplasms, familial (multiple types), susceptibility to","type":"exact"},{"name":"susceptibility to familial (multiple types) myeloproliferative/lymphoproliferative neoplasms","type":"related"}],"termid":"MONDO:0014809","xrefs":{"Monarch":{"xref_id":"0014809"}}}


id: FYPO:0002550
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cells show increased sensitivity to ultraviolet light.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress","termid":"FYPO:0002549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to UV","synonyms":[{"name":"UV resistance: decreased","type":"related"},{"name":"decreased cell population growth during cellular response to UV","type":"exact"},{"name":"decreased growth during cellular response to UV","type":"exact"},{"name":"hypersensitive to UV","type":"exact"},{"name":"increased sensitivity to UV irradiation","type":"exact"},{"name":"sensitive to ultraviolet light","type":"exact"}],"termid":"FYPO:0002550"}


id: PBO:0003225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fhn1 plasma membrane organization protein","termid":"PBO:0003225"}


id: PBO:0091378
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds with high affinity to mammalian-type 5'-TTAGGG-3' telomeric repeats, and with very low affinity to less stringently conserved S. pombe telomeric repeats","termid":"PBO:0091378"}


id: PBO:0052295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain containing 4, pre-mRNA splicing factor","termid":"PBO:0052295"}


id: MONDO:8000014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant form of antiphospholipid syndrome.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"antiphospholipid syndrome","termid":"MONDO:8000010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005046"],"is_obsolete":false,"name":"familial antiphospholipid syndrome","secondary_identifiers":["MESH:C531622","UMLS:C2930802","MEDGEN:419641","OMIM:107320"],"synonyms":[{"name":"Hughes syndrome","type":"broad"},{"name":"antiphospholipid syndrome, familial","type":"exact"}],"termid":"MONDO:8000014","xrefs":{"Monarch":{"xref_id":"8000014"}}}


id: GO:0042326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or decreases the rate of addition of phosphate groups to a molecule.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphorylation","termid":"GO:0042325"},{"relation_name":"is_a","term_name":"negative regulation of phosphate metabolic process","termid":"GO:0045936"},{"relation_name":"negatively_regulates","term_name":"phosphorylation","termid":"GO:0016310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of phosphorylation","synonyms":[{"name":"down regulation of phosphorylation","type":"exact"},{"name":"down-regulation of phosphorylation","type":"exact"},{"name":"downregulation of phosphorylation","type":"exact"},{"name":"inhibition of phosphorylation","type":"narrow"}],"termid":"GO:0042326"}


id: PBO:0002543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial endodeoxyribonuclease Pnu1","termid":"PBO:0002543"}


id: PR:P36616
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An SRSF protein kinase 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase dsk1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.14c","secondary_identifiers":["UniProtKB:P36616"],"synonyms":[{"name":"Spom972h-SRPK3","type":"exact"},{"name":"dis1-suppressing protein kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36616"}


id: FYPO:0000783
data:
  {"alleles_by_uniquename":{"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003657"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the cytoplasm is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"},{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm","termid":"FYPO:0004842"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null},"genotype_count":1,"genotypes_by_uniquename":{"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"protein mislocalized to cytoplasm during vegetative growth","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01745"],"single_locus_genotype_uniquenames":["lem2delta"],"synonyms":[{"name":"ectopic protein localization to cytoplasm during vegetative growth","type":"exact"},{"name":"protein mislocalised to cytoplasm during vegetative growth","type":"exact"},{"name":"protein mislocalized to cytoplasm during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000783","terms_by_termid":{"FYECO:0000137":null,"FYPO:0003657":null,"FYPO_EXT:0000001":null}}


id: PBO:0002794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L25 (predicted)","termid":"PBO:0002794"}


id: PBO:0000676
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.4.2.1","termid":"PBO:0000676"}


id: GO:0050436
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a microfibril, any small fibril occurring in biological material.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix binding","termid":"GO:0050840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"microfibril binding","termid":"GO:0050436"}


id: GO:0061197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the fungiform papilla are generated and organized. The fungiform papilla is a mushroom-shaped papilla of the tongue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"tongue morphogenesis","termid":"GO:0043587"},{"relation_name":"part_of","term_name":"fungiform papilla development","termid":"GO:0061196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fungiform papilla morphogenesis","termid":"GO:0061197"}


id: PBO:0067751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 50","termid":"PBO:0067751"}


id: PBO:0062963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 6","termid":"PBO:0062963"}


id: PBO:0087979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA ligase; required for tRNA splicing and for both splicing and translation of HAC1 mRNA in the UPR; has phosphodiesterase, polynucleotide kinase, and ligase activities; involved in turnover of tRNA introns; localized at the inner nuclear envelope and cytoplasm","termid":"PBO:0087979"}


id: FYPO:0006138
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of cis-aconitate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular cis-aconitate level","synonyms":[{"name":"increased cellular cis-aconitate level during mitotic cell cycle","type":"related"},{"name":"increased cellular cis-aconitate level during vegetative growth","type":"exact"},{"name":"increased cellular cis-aconitate(3-) anion level","type":"exact"},{"name":"increased cis-aconitate accumulation","type":"related"}],"termid":"FYPO:0006138"}


id: GO:0140271
data:
  {"annotated_genes":["SJAG_03608","SJAG_00057"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[119075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098708"},{"annotations":[112495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140425"}]},"cv_name":"biological_process","definition":"The directed movement of hexose from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:10735857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transport","termid":"GO:0008645"},{"relation_name":"is_a","term_name":"carbohydrate import across plasma membrane","termid":"GO:0098704"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_03608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"hexose import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140271","terms_by_termid":{"GO:0098708":null,"GO:0140425":null}}


id: PBO:0041525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 16 open reading frame 86","termid":"PBO:0041525"}


id: GO:0047961
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + glycine = CoA + N-acylglycine.","definition_xrefs":["MetaCyc:GLYCINE-N-ACYLTRANSFERASE-RXN","EC:2.3.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"glycine N-acyltransferase activity","secondary_identifiers":["Reactome:R-HSA-2534040","RHEA:19869"],"synonyms":[{"name":"acyl-CoA:glycine N-acyltransferase activity","type":"related"},{"name":"glycine acyltransferase activity","type":"related"},{"name":"glycine-N-acylase activity","type":"related"}],"termid":"GO:0047961"}


id: PATO:0001216
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001216 volume_unit (obsolete PATO:0001216)","termid":"PATO:0001216"}


id: GO:0007223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of non-canonical Wnt signaling in which Wnt binding to its receptor on the surface of a target cell leads to an increase in intracellular calcium and activation of protein kinase C (PKC).","definition_xrefs":["PMID:37804416","PMID:11532397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-canonical Wnt signaling pathway","termid":"GO:0035567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Wnt signaling pathway, calcium modulating pathway","secondary_identifiers":["Reactome:R-HSA-4086398"],"synonyms":[{"name":"Wnt receptor signaling pathway, calcium modulating pathway","type":"exact"},{"name":"Wnt-activated signaling pathway, calcium modulating pathway","type":"exact"},{"name":"frizzled-2 signaling pathway","type":"narrow"},{"name":"frizzled-2 signalling pathway","type":"narrow"},{"name":"non-canonical Wnt signaling pathway","type":"broad"}],"termid":"GO:0007223"}


id: GO:0006044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving N-acetylglucosamine. The D isomer is a common structural unit of glycoproteins in plants, bacteria and animals; it is often the terminal sugar of an oligosaccharide group of a glycoprotein.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosamine-containing compound metabolic process","termid":"GO:1901071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-acetylglucosamine metabolic process","synonyms":[{"name":"N-acetylglucosamine metabolism","type":"exact"}],"termid":"GO:0006044"}


id: PBO:0040825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bridging integrator 3","termid":"PBO:0040825"}


id: MONDO:0007168
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A skeletal dysplasia characterized by short limbs dysmorphic facies and diagnostic radiographic findings.","definition_xrefs":["Orphanet:56305"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with multiple joint dislocations (obsolete MONDO:0019700)","termid":"MONDO:0019700"},{"relation_name":"is_a","term_name":"atelosteogenesis","termid":"MONDO:0000389"},{"relation_name":"is_a","term_name":"filamin-related bone disorder","termid":"MONDO:0019690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"atelosteogenesis type III","secondary_identifiers":["icd11.foundation:1997882528","UMLS:C3668942","GARD:10608","MESH:C579928","MEDGEN:777149","SCTID:725142004","OMIM:108721"],"synonyms":[{"name":"AO3","type":"exact"},{"name":"AOIII","type":"exact"},{"name":"Aoiii","type":"related"},{"name":"atelosteogenesis type 3","type":"exact"},{"name":"atelosteogenesis, type 3","type":"related"},{"name":"atelosteogenesis, type III","type":"related"}],"termid":"MONDO:0007168","xrefs":{"Monarch":{"xref_id":"0007168"}}}


id: FYPO:0008255
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 4 of histone H3 occurs to a lower extent than normal in regions containing protein-coding genes.","definition_xrefs":["PMID:25356590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K4 acetylation during vegetative growth","termid":"FYPO:0004239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"decreased histone H3-K4 acetylation at protein coding gene during vegetative growth","termid":"FYPO:0008255"}


id: PBO:0091090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Gsk31","termid":"PBO:0091090"}


id: GO:0032390
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimer involved in the recognition of base-base and small insertion/deletion mismatches. In human the complex consists of two subunits, MLH1 and PMS1.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair complex","termid":"GO:0032300"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"MutLbeta complex","synonyms":[{"name":"MLH1/PMS1 complex","type":"exact"},{"name":"MMR complex","type":"broad"}],"termid":"GO:0032390"}


id: FYPO:0002359
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in telomeric regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0003232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal histone H3-K9 dimethylation at telomere during vegetative growth","synonyms":[{"name":"normal histone H3-K9 dimethylation at telomere during mitotic cell cycle","type":"related"},{"name":"normal histone H3K9me2 at telomere during vegetative growth","type":"exact"},{"name":"normal telomeric histone H3-K9 dimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002359"}


id: PBO:0074856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 44","termid":"PBO:0074856"}


id: PBO:0044676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDHD domain containing 2","termid":"PBO:0044676"}


id: PBO:0081329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 124","termid":"PBO:0081329"}


id: PBO:0056503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl-CpG binding domain protein 5","termid":"PBO:0056503"}


id: PBO:0066686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"relaxin 1","termid":"PBO:0066686"}


id: PBO:0038739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin like 11, pseudogene","termid":"PBO:0038739"}


id: PBO:0045766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ECI1 antisense RNA 1","termid":"PBO:0045766"}


id: GO:0090560
data:
  {"annotated_genes":["SJAG_01058","SJAG_04085"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67997,69744],"is_not":false,"summary":null,"term":"GO:0090560"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction S-adenosyl-L-methionine + L-histidine-[translation elongation factor 2] = S-methyl-5-thioadenosine + 2-[(3S)-3-amino-3-carboxypropyl]-L-histidine-[translation elongation factor 2].","definition_xrefs":["GOC:pde","PMID:15485916","RHEA:36783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01058":null,"SJAG_04085":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016765","GO:0003674"],"is_obsolete":false,"name":"2-(3-amino-3-carboxypropyl)histidine synthase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:RXN-11371","Reactome:R-HSA-5358494","EC:2.5.1.108"],"termid":"GO:0090560","terms_by_termid":{"GO:0090560":null}}


id: PBO:0060381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin VIIA and Rab interacting protein","termid":"PBO:0060381"}


id: GO:0015332
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete leucine/valine/isoleucine permease activity (obsolete GO:0015332)","synonyms":[{"name":"leucine/valine/isoleucine permease activity","type":"exact"}],"termid":"GO:0015332"}


id: GO:0046240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of xylene, a mixture of three colorless, aromatic hydrocarbon liquids, ortho-, meta- and para-xylene.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete xylene biosynthetic process (obsolete GO:0046240)","synonyms":[{"name":"xylene anabolism","type":"exact"},{"name":"xylene biosynthesis","type":"exact"},{"name":"xylene biosynthetic process","type":"exact"},{"name":"xylene formation","type":"exact"},{"name":"xylene synthesis","type":"exact"}],"termid":"GO:0046240"}


id: GO:0007450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the dorsal/ventral axis of the imaginal disc. Imaginal disks are masses of hypodermic cells, carried by the larvae of some insects after leaving the egg, from which masses the wings and legs of the adult are subsequently formed.","definition_xrefs":["GOC:jid","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc pattern formation","termid":"GO:0007447"},{"relation_name":"is_a","term_name":"dorsal/ventral pattern formation","termid":"GO:0009953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal/ventral pattern formation, imaginal disc","synonyms":[{"name":"dorsal-ventral pattern formation, imaginal disc","type":"exact"},{"name":"dorsoventral pattern formation, imaginal disc","type":"exact"}],"termid":"GO:0007450"}


id: FYPO:0004956
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial RNA 3'-end processing is abnormal.","definition_xrefs":["PMID:18304578","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0000294","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitochondrial RNA 3'-end processing","synonyms":[{"name":"abnormal mitochondrial RNA 3' end processing","type":"exact"},{"name":"abnormal mitochondrial RNA 3'-end processing during mitotic cell cycle","type":"related"},{"name":"abnormal mitochondrial RNA 3'-end processing during vegetative growth","type":"exact"}],"termid":"FYPO:0004956"}


id: PBO:0005822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase Gst2","termid":"PBO:0005822"}


id: MONDO:0022013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by spontaneous longitudinal transmural rupture of the esophagus, usually in its distal part.","definition_xrefs":["PMID:27982294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Boerhaave syndrome","secondary_identifiers":["UMLS:C0238115","MEDGEN:65948","SCTID:19995004","MESH:C536571"],"synonyms":[{"name":"Boerhaave syndrome","type":"exact"},{"name":"Boerhaave's syndrome","type":"related"},{"name":"Boerhave syndrome","type":"related"},{"name":"boerhaave's syndrome","type":"related"},{"name":"spontaneous esophageal perforation","type":"related"},{"name":"spontaneous perforation of esophagus","type":"related"},{"name":"spontaneous perforation of oesophagus","type":"related"},{"name":"spontaneous perforation of the esophagus","type":"related"},{"name":"spontaneous perforation of the oesophagus","type":"related"},{"name":"spontaneous rupture of esophagus","type":"exact"},{"name":"spontaneous rupture of oesophagus","type":"exact"},{"name":"spontaneous rupture of the esophagus","type":"related"},{"name":"spontaneous rupture of the oesophagus","type":"related"}],"termid":"MONDO:0022013","xrefs":{"Monarch":{"xref_id":"0022013"}}}


id: MONDO:0009339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital bile acid synthesis defect type 2 (BAS defect type 2) is an anomaly of bile acid synthesis characterized by severe and rapidly progressive cholestatic liver disease, and malabsorption of fat and fat-soluble vitamins.","definition_xrefs":["Orphanet:79303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital bile acid synthesis defect","termid":"MONDO:0018841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"congenital bile acid synthesis defect 2","secondary_identifiers":["MESH:C535443","OMIM:235555","MEDGEN:383840","UMLS:C1856127","DOID:0111069","GARD:10045"],"synonyms":[{"name":"AKR1D1 congenital bile acid synthesis defect","type":"exact"},{"name":"BASD2","type":"exact"},{"name":"CBAS2","type":"exact"},{"name":"bile acid synthesis defect, congenital, 2","type":"related"},{"name":"bile acid synthesis defect, congenital, type 2","type":"exact"},{"name":"cholestasis with Delta(4)-3-oxosteroid 5-Beta-reductase deficiency","type":"related"},{"name":"cholestasis with delta(4)-3-oxosteroid 5-beta-reductase deficiency","type":"exact"},{"name":"congenital bile acid synthesis defect caused by mutation in AKR1D1","type":"exact"},{"name":"congenital bile acid synthesis defect type 2","type":"exact"},{"name":"congenital bile acid synthesis defect, type 2","type":"related"}],"termid":"MONDO:0009339","xrefs":{"Monarch":{"xref_id":"0009339"}}}


id: MONDO:0023538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypopituitarism","termid":"MONDO:0005152"},{"relation_name":"is_a","term_name":"microphthalmia","termid":"MONDO:0021129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Kaplowitz-Bodurtha syndrome","secondary_identifiers":["MESH:C536893","UMLS:C2931361","MEDGEN:444037"],"synonyms":[{"name":"congenital hypopituitarism and microphthalmia","type":"related"},{"name":"hypopituitarism microphthalmia","type":"related"}],"termid":"MONDO:0023538","xrefs":{"Monarch":{"xref_id":"0023538"}}}


id: GO:0019133
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: choline + 2 reduced ferredoxin + O2 + 2 H+ = betaine aldehyde hydrate + 2 oxidized ferredoxin + H2O.","definition_xrefs":["EC:1.14.15.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"choline monooxygenase activity","secondary_identifiers":["MetaCyc:RXN1F-357","RHEA:17769"],"synonyms":[{"name":"choline,reduced-ferredoxin:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0019133"}


id: GO:0009335
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An enzyme complex that catalyzes the formation of holo-[acyl-carrier protein] from CoA and apo-[acyl-carrier protein].","definition_xrefs":["EC:2.7.8.7"],"gene_count":0,"genotype_count":0,"name":"obsolete holo-[acyl-carrier protein] synthase complex (obsolete GO:0009335)","synonyms":[{"name":"holo-ACP synthase complex","type":"exact"},{"name":"holo-[acyl-carrier protein] synthase complex","type":"exact"}],"termid":"GO:0009335"}


id: PBO:0028249
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_actin_cytoskeleton","termid":"PBO:0028249"}


id: GO:0141192
data:
  {"annotated_genes":["SJAG_01352"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98820],"is_not":false,"summary":null,"term":"GO:0141192"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 ATP + H+ = diphosphate + P(1),P(4)-bis(5'-adenosyl)tetraphosphate.","definition_xrefs":["PMID:16884494","PMID:27398309","RHEA:34935","PMID:19710017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016779"],"is_obsolete":false,"name":"ATP:ATP adenylyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9825790"],"synonyms":[{"name":"adenine triphosphate adenylyltransferase activity","type":"related"}],"termid":"GO:0141192","terms_by_termid":{"GO:0141192":null}}


id: PBO:0079865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil-DNA glycosylase pseudogene 2","termid":"PBO:0079865"}


id: PBO:0004540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-B homolog","termid":"PBO:0004540"}


id: PBO:0052889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 9-12, pseudogene","termid":"PBO:0052889"}


id: GO:0030842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the disassembly of intermediate filaments by the removal of monomers from a filament.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intermediate filament polymerization or depolymerization","termid":"GO:0045108"},{"relation_name":"is_a","term_name":"regulation of protein depolymerization","termid":"GO:1901879"},{"relation_name":"regulates","term_name":"intermediate filament depolymerization","termid":"GO:0045106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intermediate filament depolymerization","termid":"GO:0030842"}


id: GO:1902360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any conversion of ds siRNA to ss siRNA that is involved in gene silencing by small RNA.","definition_xrefs":["GOC:TermGenie","GOC:vw","PMID:19239886"],"gene_count":0,"genotype_count":0,"name":"obsolete conversion of ds siRNA to ss siRNA involved in gene silencing by small RNA (obsolete GO:1902360)","synonyms":[{"name":"conversion of double-stranded small interfering RNA to single-stranded small interfering RNA involved in RNA interference-like chromatin silencing","type":"related"},{"name":"conversion of double-stranded small interfering RNA to single-stranded small interfering RNA involved in RNA-mediated chromatin silencing","type":"related"},{"name":"conversion of double-stranded small interfering RNA to single-stranded small interfering RNA involved in RNA-mediated transcriptional silencing","type":"related"},{"name":"conversion of double-stranded small interfering RNA to single-stranded small interfering RNA involved in RNAi-directed chromatin silencing","type":"related"},{"name":"conversion of double-stranded small interfering RNA to single-stranded small interfering RNA involved in RNAi-like chromatin silencing","type":"related"},{"name":"conversion of double-stranded small interfering RNA to single-stranded small interfering RNA involved in chromatin silencing by small RNA","type":"related"},{"name":"conversion of double-stranded small interfering RNA to single-stranded small interfering RNA involved in small RNA-mediated heterochromatic silencing","type":"related"},{"name":"conversion of ds siRNA to ss siRNA involved in RNA interference-like chromatin silencing","type":"exact"},{"name":"conversion of ds siRNA to ss siRNA involved in RNA-mediated chromatin silencing","type":"exact"},{"name":"conversion of ds siRNA to ss siRNA involved in RNA-mediated transcriptional silencing","type":"exact"},{"name":"conversion of ds siRNA to ss siRNA involved in RNAi-directed chromatin silencing","type":"exact"},{"name":"conversion of ds siRNA to ss siRNA involved in RNAi-like chromatin silencing","type":"exact"},{"name":"conversion of ds siRNA to ss siRNA involved in chromatin silencing by small RNA","type":"exact"},{"name":"conversion of ds siRNA to ss siRNA involved in small RNA-mediated heterochromatic silencing","type":"exact"}],"termid":"GO:1902360"}


id: SO:0002066
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A deletion of a mobile element when comparing a reference sequence (has mobile element) to a individual sequence (does not have mobile element).","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deletion","termid":"SO:0000159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mobile_element_deletion","synonyms":[{"name":"mobile element deletion","type":"exact"}],"termid":"SO:0002066"}


id: PBO:0053665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 842","termid":"PBO:0053665"}


id: PBO:0029147
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_methylenetetrahydrofolate_reductase_(NADPH)_activity","termid":"PBO:0029147"}


id: GO:0034373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acquisition, loss or modification of a protein or lipid within an intermediate-density lipoprotein particle.","definition_xrefs":["GOC:mah","GOC:rl","GOC:expert_pt","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triglyceride-rich lipoprotein particle remodeling","termid":"GO:0034370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intermediate-density lipoprotein particle remodeling","synonyms":[{"name":"IDL remodeling","type":"exact"},{"name":"IDL remodelling","type":"exact"},{"name":"intermediate-density lipoprotein particle formation","type":"related"},{"name":"intermediate-density lipoprotein particle remodelling","type":"exact"}],"termid":"GO:0034373"}


id: PBO:0114849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial and nucleatr DNA polymerase zeta subunit Rev7","termid":"PBO:0114849"}


id: MONDO:1010090
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anotia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental defect during embryogenesis, non-human animal","termid":"MONDO:1011310"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease, non-human animal","termid":"MONDO:1011342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anotia, non-human animal","secondary_identifiers":["OMIA:001411"],"termid":"MONDO:1010090","xrefs":{"Monarch":{"xref_id":"1010090"}}}


id: PBO:0086443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative maltose-responsive transcription factor","termid":"PBO:0086443"}


id: PBO:0074509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A1","termid":"PBO:0074509"}


id: GO:0061441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of a renal artery is generated and organized. Renal arteries supply the kidneys with blood.","definition_xrefs":["PMID:11891195","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"artery morphogenesis","termid":"GO:0048844"},{"relation_name":"part_of","term_name":"kidney vasculature morphogenesis","termid":"GO:0061439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal artery morphogenesis","termid":"GO:0061441"}


id: GO:0086041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a potassium ion by a voltage-gated channel through the plasma membrane of an SA node cardiac muscle cell contributing to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel activity","termid":"GO:0005249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"voltage-gated potassium channel activity involved in SA node cell action potential depolarization","synonyms":[{"name":"voltage-gated potassium channel activity involved in SAN cell action potential depolarization","type":"exact"},{"name":"voltage-gated potassium channel activity involved in sinoatrial node cell action potential depolarization","type":"exact"},{"name":"voltage-gated potassium channel activity involved in sinus node cell action potential depolarization","type":"narrow"}],"termid":"GO:0086041"}


id: FYPO:0001588
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of lysine into the cell occurs to a lower extent than normal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased lysine import","termid":"FYPO:0001650"},{"relation_name":"is_a","term_name":"abnormal lysine import during nitrogen starvation","termid":"FYPO:0001652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased lysine import during nitrogen starvation","synonyms":[{"name":"decreased L-lysine import across plasma membrane during nitrogen starvation","type":"exact"},{"name":"decreased L-lysine import during nitrogen starvation","type":"exact"},{"name":"decreased lysine import during nitrogen depletion","type":"exact"},{"name":"decreased lysine import during nitrogen deprivation","type":"exact"},{"name":"decreased lysine import into cell during nitrogen starvation","type":"exact"},{"name":"decreased lysine transport into cell during nitrogen starvation","type":"exact"},{"name":"decreased lysine uptake during nitrogen starvation","type":"exact"},{"name":"reduced lysine import during nitrogen starvation","type":"exact"}],"termid":"FYPO:0001588"}


id: GO:0030317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, self-propelled movement of a cilium (aka flagellum) that contributes to the movement of a flagellated sperm.","definition_xrefs":["GO_REF:0000060","GOC:krc","PMID:26680031","GOC:cilia","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium-dependent cell motility","termid":"GO:0060285"},{"relation_name":"is_a","term_name":"cilium movement involved in cell motility","termid":"GO:0060294"},{"relation_name":"is_a","term_name":"sperm motility","termid":"GO:0097722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flagellated sperm motility","secondary_identifiers":["Wikipedia:Sperm_motility","GO:0097724","GO:1905419"],"synonyms":[{"name":"flagellated sperm movement","type":"exact"},{"name":"sperm flagellum movement","type":"exact"},{"name":"sperm flagellum movement involved in flagellated sperm motility","type":"exact"},{"name":"sperm flagellum movement involved in flagellated sperm movement","type":"exact"},{"name":"sperm motility","type":"broad"},{"name":"sperm movement","type":"broad"}],"termid":"GO:0030317"}


id: PBO:0044117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cutaneous T cell lymphoma-associated antigen 1","termid":"PBO:0044117"}


id: MONDO:0012334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant spastic paraplegia type 29 (SPG29) is a complex form of hereditary spastic paraplegia characterized by a spastic paraplegia presenting in adolescence, associated with the additional manifestations of sensorial hearing impairment due to auditory neuropathy and persistent vomiting due to a hiatal or paraesophageal hernia.","definition_xrefs":["Orphanet:101009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant complex spastic paraplegia","termid":"MONDO:0015087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0000426"],"is_obsolete":false,"name":"hereditary spastic paraplegia 29","secondary_identifiers":["OMIM:609727","SCTID:733029008","MESH:C536863","UMLS:C1857855","GARD:9729","MEDGEN:346682","DOID:0110780"],"synonyms":[{"name":"SPG29","type":"exact"},{"name":"autosomal dominant spastic paraplegia 29","type":"exact"},{"name":"autosomal dominant spastic paraplegia type 29","type":"related"},{"name":"hereditary spastic paraplegia type 29","type":"exact"},{"name":"spastic paraplegia 29","type":"related"},{"name":"spastic paraplegia 29, autosomal dominant","type":"related"}],"termid":"MONDO:0012334","xrefs":{"Monarch":{"xref_id":"0012334"}}}


id: PBO:0005568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin family protein","termid":"PBO:0005568"}


id: FYPO:0004769
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-asparagine measured in the vacuole is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in vacuole","termid":"FYPO:0001730"},{"relation_name":"is_a","term_name":"increased cellular asparagine level","termid":"FYPO:0006953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased vacuolar asparagine level","synonyms":[{"name":"increased level of asparagine in vacuole","type":"exact"},{"name":"increased vacuolar L-asparagine level","type":"exact"},{"name":"increased vacuolar asparagine level during mitotic cell cycle","type":"related"},{"name":"increased vacuolar asparagine level during vegetative growth","type":"exact"}],"termid":"FYPO:0004769"}


id: GO:0044587
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cellopentaose, an oligosaccharide consisting of four glucose residues resulting from hydrolysis of cellulose.","definition_xrefs":["GOC:tt","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide binding","termid":"GO:0070492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cellopentaose binding","termid":"GO:0044587"}


id: FYPO:0004457
data:
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id: MONDO:0011050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microcephaly - cardiac defect - lung malsegmentation syndrome is a very rare syndrome characterized by the combination of microcephaly, heart defects, renal hypoplasia, lung segmentation defects and cleft palate.","definition_xrefs":["Orphanet:2516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"microcephaly-cardiac defect-lung malsegmentation syndrome","secondary_identifiers":["OMIM:601355","UMLS:C1832436","GARD:2098","MEDGEN:371329","MESH:C563341","SCTID:719379001"],"synonyms":[{"name":"Ellis Yale Winter syndrome","type":"related"},{"name":"Ellis-Yale-Winter syndrome","type":"exact"},{"name":"microcephaly, congenital heart disease, lung segmentation defects and unilateral renal agenesis","type":"related"},{"name":"microcephaly, congenital heart disease, unilateral renal agenesis, and hyposegmented lungs","type":"related"}],"termid":"MONDO:0011050","xrefs":{"Monarch":{"xref_id":"0011050"}}}


id: PBO:0065729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain containing 2A pseudogene 1","termid":"PBO:0065729"}


id: GO:0160248
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: guanosine(27) in tRNA + 2 S-adenosyl-L-methionine = 2 H+ + N(2)-dimethylguanosine(27) in tRNA + 2 S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:39786990","PMID:39786998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"tRNA (guanine) methyltransferase activity","termid":"GO:0016423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0016740","GO:0140098","GO:0140101","GO:0003674","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"tRNA (guanine(27)-N2)-dimethyltransferase activity","termid":"GO:0160248"}


id: GO:0048816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the ocellus are generated and organized. The ocellus is a simple visual organ of insects.","direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"is_a","term_name":"sensory organ morphogenesis","termid":"GO:0090596"},{"relation_name":"part_of","term_name":"eye-antennal disc morphogenesis","termid":"GO:0007455"},{"relation_name":"part_of","term_name":"ocellus development","termid":"GO:0008056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ocellus morphogenesis","termid":"GO:0048816"}


id: GO:0047723
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + IMP = D-ribose 5-phosphate + hypoxanthine.","definition_xrefs":["RHEA:20469","EC:3.2.2.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"inosinate nucleosidase activity","secondary_identifiers":["KEGG_REACTION:R01128","MetaCyc:INOSINATE-NUCLEOSIDASE-RXN"],"synonyms":[{"name":"5'-inosinate phosphoribohydrolase activity","type":"related"}],"termid":"GO:0047723"}


id: PBO:0071441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 47","termid":"PBO:0071441"}


id: PBO:0039780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 7 pseudogene 5","termid":"PBO:0039780"}


id: PBO:0040111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASAP1 intronic transcript 2","termid":"PBO:0040111"}


id: MONDO:0014568
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant spastic paraplegia type 73 (SPG73) is a pure form of hereditary spastic paraplegia characterized by adult onset of crural spastic paraparesis, hyperreflexia, extensor plantar responses, proximal muscle weakness, mild muscle atrophy, decreased vibration sensation at ankles, and mild urinary dysfunction. foot deformities have been reported to eventually occur in some patients. No abnormalities are noted on brain magnetic resonance imaging and peripheral nerve conduction velocity studies.","definition_xrefs":["Orphanet:444099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pure hereditary spastic paraplegia","termid":"MONDO:0015149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 73","secondary_identifiers":["UMLS:C5568981","MEDGEN:1800404","OMIM:616282","GARD:17763","DOID:0110818"],"synonyms":[{"name":"CPT1C autosomal dominant pure spastic paraplegia","type":"exact"},{"name":"SPG73","type":"exact"},{"name":"autosomal dominant pure spastic paraplegia caused by mutation in CPT1C","type":"exact"},{"name":"autosomal dominant spastic paraplegia 73","type":"exact"},{"name":"autosomal dominant spastic paraplegia type 73","type":"exact"},{"name":"hereditary spastic paraplegia type 73","type":"exact"},{"name":"spastic paraplegia 73, autosomal dominant","type":"related"}],"termid":"MONDO:0014568","xrefs":{"Monarch":{"xref_id":"0014568"}}}


id: GO:0009523
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A photosystem that contains a pheophytin-quinone reaction center with associated accessory pigments and electron carriers. In cyanobacteria and chloroplasts, in the presence of light, PSII functions as a water-plastoquinone oxidoreductase, transferring electrons from water to plastoquinone, whereas other photosynthetic bacteria carry out anoxygenic photosynthesis and oxidize other compounds to re-reduce the photoreaction center.","definition_xrefs":["GOC:ds","GOC:mah","ISBN:0943088399","PMID:9821949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosystem","termid":"GO:0009521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"photosystem II","secondary_identifiers":["Wikipedia:Photosystem_II"],"termid":"GO:0009523"}


id: PBO:0044332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 14","termid":"PBO:0044332"}


id: GO:0097728
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A motile cilium where the axoneme has a ring of nine outer microtubule doublets but no central microtubules (and is therefore called a 9+0 axoneme).","definition_xrefs":["PMID:10330409","PMID:22118931","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"motile cilium","termid":"GO:0031514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"9+0 motile cilium","synonyms":[{"name":"motile 9+0 cilium","type":"exact"},{"name":"nodal cilium","type":"narrow"}],"termid":"GO:0097728"}


id: PBO:0055766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukemia NUP98 fusion partner 1","termid":"PBO:0055766"}


id: PBO:0040049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 2/3 complex subunit 1B","termid":"PBO:0040049"}


id: PBO:0027158
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_vacuolar_alanine_level","termid":"PBO:0027158"}


id: RO:0002418
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p 'causally upstream or within' q iff (1) the end of p is before the end of q and (2) the execution of p exerts some causal influence over the outputs of q; i.e. if p was abolished or the outputs of p were to be modified, this would necessarily affect q.","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_relation_between_processes","termid":"RO:0002501"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_upstream_of_or_within","synonyms":[{"name":"affects","type":"related"}],"termid":"RO:0002418"}


id: GO:0072280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Coordinated organization of groups of cells in the plane of an epithelium that contributes to the shaping of a nephron in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of planar polarity involved in nephron morphogenesis","termid":"GO:0072046"},{"relation_name":"part_of","term_name":"metanephric nephron morphogenesis","termid":"GO:0072273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of planar polarity involved in metanephric nephron morphogenesis","synonyms":[{"name":"establishment of planar cell polarity involved in metanephric nephron morphogenesis","type":"narrow"}],"termid":"GO:0072280"}


id: PBO:0081185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZHX1-C8orf76 readthrough","termid":"PBO:0081185"}


id: MONDO:0800466
data:
  {"annotated_genes":["SJAG_04978"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011301"}]},"cv_name":"mondo","definition":"Any endocrine system disorder in which the cause of the disease is inactivation of the GNAS gene. Phenotypes include pseudohypoparathyroidism Ia, Ib, and Ic (PHP-Ia, -Ib, -Ic), pseudopseudohypoparathyroidism (PPHP), progressive osseous heteroplasia (POH), and osteoma cutis (OC).","definition_xrefs":["PMID:29072892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04978":null},"genotype_count":0,"is_obsolete":false,"name":"disorder of GNAS inactivation","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0800466","terms_by_termid":{"MONDO:0011301":null},"xrefs":{"Monarch":{"xref_id":"0800466"}}}


id: PBO:0051456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 7-35 (pseudogene)","termid":"PBO:0051456"}


id: MONDO:0018748
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune disease characterized by subepidermal blisters and linear deposition of autoantibodies at the dermoepidermal junction. The accumulated autoantibodies are of immunoglobulin A and occasionally immunoglobulin G classes against epidermal basement membrane proteins. The dermatosis is sometimes associated with malignancies and use of certain drugs (e.g., vancomycin).","definition_xrefs":["MESH:D062027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune bullous skin disease","termid":"MONDO:0019337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"linear IgA Dermatosis","secondary_identifiers":["EFO:0009313","UMLS:C0406650","Orphanet:46488","SCTID:95330001","icd11.foundation:1802341051","GARD:18834","MedDRA:10024515","MEDGEN:473106"],"termid":"MONDO:0018748","xrefs":{"Monarch":{"xref_id":"0018748"}}}


id: PBO:0034128
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-synapsed_by_via_type_Is_bouton","termid":"PBO:0034128"}


id: GO:0034122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor signaling pathway.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of toll-like receptor signaling pathway","termid":"GO:0034121"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor signaling pathway","termid":"GO:0002224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of toll-like receptor signaling pathway","synonyms":[{"name":"negative regulation of TLR signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0034122"}


id: PBO:0045445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPYD antisense RNA 1","termid":"PBO:0045445"}


id: MONDO:0032732
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"hearing loss, autosomal recessive 113","secondary_identifiers":["DOID:0111636","MEDGEN:1674289","OMIM:618410","GARD:18152","UMLS:C5193079"],"synonyms":[{"name":"DFNB113","type":"narrow"},{"name":"deafness, autosomal recessive 113","type":"narrow"}],"termid":"MONDO:0032732","xrefs":{"Monarch":{"xref_id":"0032732"}}}


id: GO:0047728
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: carnitine + NAD+ = 3-dehydrocarnitine + H+ + NADH.","definition_xrefs":["EC:1.1.1.108","RHEA:19265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"carnitine 3-dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R02395","MetaCyc:CARNITINE-3-DEHYDROGENASE-RXN"],"synonyms":[{"name":"carnitine:NAD+ 3-oxidoreductase activity","type":"related"}],"termid":"GO:0047728"}


id: GO:0045732
data:
  {"annotated_genes":["SJAG_00642","SJAG_04990","SJAG_01131","SJAG_01210","SJAG_01544","SJAG_00071","SJAG_00712","SJAG_00766","SJAG_03048","SJAG_01489","SJAG_03699","SJAG_04477","SJAG_02723"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"},{"annotations":[66698,68352,68858,70345,62259,69836],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901800"},{"annotations":[104203,113566,118936,108490,110736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032436"},{"annotations":[101206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904352"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"regulation of protein catabolic process","termid":"GO:0042176"},{"relation_name":"is_a","term_name":"positive regulation of protein metabolic process","termid":"GO:0051247"},{"relation_name":"positively_regulates","term_name":"protein catabolic process","termid":"GO:0030163"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00642":null,"SJAG_00712":null,"SJAG_00766":null,"SJAG_01131":null,"SJAG_01210":null,"SJAG_01489":null,"SJAG_01544":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03699":null,"SJAG_04477":null,"SJAG_04990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein catabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:1903364","GO:2000600"],"synonyms":[{"name":"activation of cellular protein breakdown","type":"narrow"},{"name":"activation of cellular protein catabolic process","type":"narrow"},{"name":"activation of cellular protein catabolism","type":"narrow"},{"name":"activation of cellular protein degradation","type":"narrow"},{"name":"activation of protein catabolic process","type":"narrow"},{"name":"positive regulation of cellular protein breakdown","type":"exact"},{"name":"positive regulation of cellular protein catabolic process","type":"exact"},{"name":"positive regulation of cellular protein catabolism","type":"exact"},{"name":"positive regulation of cellular protein degradation","type":"exact"},{"name":"positive regulation of cyclin breakdown","type":"narrow"},{"name":"positive regulation of cyclin catabolic process","type":"narrow"},{"name":"positive regulation of cyclin catabolism","type":"narrow"},{"name":"positive regulation of cyclin degradation","type":"narrow"},{"name":"positive regulation of degradation of cyclin","type":"narrow"},{"name":"positive regulation of protein breakdown","type":"exact"},{"name":"positive regulation of protein catabolism","type":"exact"},{"name":"positive regulation of protein degradation","type":"exact"},{"name":"stimulation of protein catabolic process","type":"narrow"},{"name":"up regulation of cellular protein breakdown","type":"exact"},{"name":"up regulation of cellular protein catabolic process","type":"exact"},{"name":"up regulation of cellular protein catabolism","type":"exact"},{"name":"up regulation of cellular protein degradation","type":"exact"},{"name":"up regulation of protein catabolic process","type":"exact"},{"name":"up-regulation of cellular protein breakdown","type":"exact"},{"name":"up-regulation of cellular protein catabolic process","type":"exact"},{"name":"up-regulation of cellular protein catabolism","type":"exact"},{"name":"up-regulation of cellular protein degradation","type":"exact"},{"name":"up-regulation of protein catabolic process","type":"exact"},{"name":"upregulation of cellular protein breakdown","type":"exact"},{"name":"upregulation of cellular protein catabolic process","type":"exact"},{"name":"upregulation of cellular protein catabolism","type":"exact"},{"name":"upregulation of cellular protein degradation","type":"exact"},{"name":"upregulation of protein catabolic process","type":"exact"}],"termid":"GO:0045732","terms_by_termid":{"GO:0032436":null,"GO:1901800":null,"GO:1904352":null,"GO:1905786":null}}


id: PBO:0065282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich and Gla domain 2","termid":"PBO:0065282"}


id: MONDO:0008156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sclerosing disorder of the skeleton characterized by increased bone density that classically displays the radiographic sign of ''sandwich vertebrae'' (dense bands of sclerosis parallel to the vertebral endplates).","definition_xrefs":["Orphanet:53"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete unclassified primitive or secondary maculopathy (obsolete MONDO:0020244)","termid":"MONDO:0020244"},{"relation_name":"excluded_subClassOf","term_name":"hereditary optic neuropathy","termid":"MONDO:0020249"},{"relation_name":"is_a","term_name":"autosomal dominant osteopetrosis","termid":"MONDO:0020645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant osteopetrosis 2","secondary_identifiers":["MEDGEN:465707","GARD:383","OMIM:166600","SCTID:725050005","UMLS:C3179239","DOID:0110938"],"synonyms":[{"name":"Albers-Schonberg disease, autosomal dominant","type":"related"},{"name":"Albers-Schonberg osteopetrosis","type":"exact"},{"name":"Albers-Schönberg osteopetrosis","type":"exact"},{"name":"OPTA2","type":"exact"},{"name":"autosomal dominant Albers-Schonberg disease","type":"exact"},{"name":"autosomal dominant osteopetrosis type 2","type":"exact"},{"name":"autosomal dominant osteopetrosis type II","type":"exact"},{"name":"marble bones, autosomal dominant","type":"related"},{"name":"osteopetrosis autosomal dominant type 2","type":"exact"},{"name":"osteopetrosis, autosomal dominant 2","type":"related"},{"name":"osteopetrosis, autosomal dominant type 2","type":"exact"},{"name":"osteopetrosis, autosomal dominant, type 2","type":"related"},{"name":"osteosclerosis Fragilis generalisata","type":"related"}],"termid":"MONDO:0008156","xrefs":{"Monarch":{"xref_id":"0008156"}}}


id: PBO:0090032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-keto sterol reductase Erg27","termid":"PBO:0090032"}


id: MONDO:0000803
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergy involving a Penaeus monodon.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete tiger prawn allergy (obsolete MONDO:0000803)","secondary_identifiers":["DOID:0060528"],"synonyms":[{"name":"Penaeus monodon allergic disease","type":"exact"},{"name":"Penaeus monodon allergy","type":"exact"},{"name":"Penaeus monodon caused allergic disease","type":"exact"},{"name":"allergy of Penaeus monodon","type":"exact"}],"termid":"MONDO:0000803","xrefs":{"Monarch":{"xref_id":"0000803"}}}


id: PBO:0012247
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae pma1","termid":"PBO:0012247"}


id: PBO:0072057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 27","termid":"PBO:0072057"}


id: GO:0075243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which male and female gametangia develop and fuse to form an oospore, a thick-walled resting spore of Oomycetes and certain algae and fungi.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"oospore formation","termid":"GO:0075243"}


id: GO:0002708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of lymphocyte mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte mediated immunity","termid":"GO:0002705"},{"relation_name":"is_a","term_name":"regulation of lymphocyte mediated immunity","termid":"GO:0002706"},{"relation_name":"positively_regulates","term_name":"lymphocyte mediated immunity","termid":"GO:0002449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lymphocyte mediated immunity","synonyms":[{"name":"activation of lymphocyte mediated immunity","type":"narrow"},{"name":"stimulation of lymphocyte mediated immunity","type":"narrow"},{"name":"up regulation of lymphocyte mediated immunity","type":"exact"},{"name":"up-regulation of lymphocyte mediated immunity","type":"exact"},{"name":"upregulation of lymphocyte mediated immunity","type":"exact"}],"termid":"GO:0002708"}


id: GO:0140239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A vesicle-mediated transport process in which the postsynapse take up external materials or membrane constituents by the invagination of a small region of the plasma membrane to form a new membrane-bounded vesicle.","definition_xrefs":["PMID:12839988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytosis","termid":"GO:0006897"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"vesicle-mediated transport in synapse","termid":"GO:0099003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0016192"],"is_obsolete":false,"name":"postsynaptic endocytosis","termid":"GO:0140239"}


id: PR:O14338
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ebs1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized serine-rich protein C2F12.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2F12.03c","synonyms":[{"name":"Spom972h-ebs1","type":"exact"}],"termid":"PR:O14338"}


id: PBO:0002558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein involved in meiosis Mei2","termid":"PBO:0002558"}


id: PR:O74848
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug146 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 146 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.12c","synonyms":[{"name":"Spom972h-mug146","type":"exact"}],"termid":"PR:O74848"}


id: GO:0046827
data:
  {"annotated_genes":["SJAG_04312","SJAG_01245","SJAG_01805","SJAG_04464"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95619,102258,103670,112865],"is_not":false,"summary":null,"term":"GO:0046827"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of directed movement of proteins from the nucleus into the cytoplasm.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleocytoplasmic transport","termid":"GO:0046824"},{"relation_name":"is_a","term_name":"regulation of protein export from nucleus","termid":"GO:0046825"},{"relation_name":"is_a","term_name":"positive regulation of intracellular protein transport","termid":"GO:0090316"},{"relation_name":"positively_regulates","term_name":"protein export from nucleus","termid":"GO:0006611"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01245":null,"SJAG_01805":null,"SJAG_04312":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0006810","GO:0006913","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein export from nucleus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of protein export from nucleus","type":"narrow"},{"name":"positive regulation of protein export from cell nucleus","type":"exact"},{"name":"positive regulation of protein export out of nucleus","type":"exact"},{"name":"positive regulation of protein transport from nucleus to cytoplasm","type":"exact"},{"name":"positive regulation of protein-nucleus export","type":"exact"},{"name":"stimulation of protein export from nucleus","type":"narrow"},{"name":"up regulation of protein export from nucleus","type":"exact"},{"name":"up-regulation of protein export from nucleus","type":"exact"},{"name":"upregulation of protein export from nucleus","type":"exact"}],"termid":"GO:0046827","terms_by_termid":{"GO:0046827":null}}


id: GO:0102194
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + a [protein]-N6-D-fructosyl-L-lysine = ADP + H+ + a [protein]-N6-(3-O-phospho-D-fructosyl)-L-lysine.","definition_xrefs":["GOC:pz","EC:2.7.1.171","PMID:11016445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0016740","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"protein-fructosamine 3-kinase activity","secondary_identifiers":["RHEA:59832","GO:0030387","MetaCyc:RXN-12005"],"synonyms":[{"name":"fructosamine-3-kinase activity","type":"related"}],"termid":"GO:0102194"}


id: PBO:0075744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 68 pseudogene 3","termid":"PBO:0075744"}


id: PBO:0080314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 78 pseudogene","termid":"PBO:0080314"}


id: GO:1900202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of spread of virus in host, cell to cell.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of spread of virus in host, cell to cell (obsolete GO:1900202)","synonyms":[{"name":"down regulation of cell to cell spread of virus within host","type":"exact"},{"name":"down regulation of spread of virus in host, cell to cell","type":"exact"},{"name":"down regulation of spread of virus within host, cell to cell","type":"exact"},{"name":"down regulation of viral spread within host, cell to cell","type":"exact"},{"name":"down-regulation of cell to cell spread of virus within host","type":"exact"},{"name":"down-regulation of spread of virus in host, cell to cell","type":"exact"},{"name":"down-regulation of spread of virus within host, cell to cell","type":"exact"},{"name":"down-regulation of viral spread within host, cell to cell","type":"exact"},{"name":"downregulation of cell to cell spread of virus within host","type":"exact"},{"name":"downregulation of spread of virus in host, cell to cell","type":"exact"},{"name":"downregulation of spread of virus within host, cell to cell","type":"exact"},{"name":"downregulation of viral spread within host, cell to cell","type":"exact"},{"name":"inhibition of cell to cell spread of virus within host","type":"exact"},{"name":"inhibition of spread of virus in host, cell to cell","type":"narrow"},{"name":"inhibition of spread of virus within host, cell to cell","type":"exact"},{"name":"inhibition of viral spread within host, cell to cell","type":"exact"},{"name":"negative regulation of cell to cell spread of virus within host","type":"exact"},{"name":"negative regulation of spread of virus in host, cell to cell","type":"exact"},{"name":"negative regulation of spread of virus within host, cell to cell","type":"exact"},{"name":"negative regulation of viral spread within host, cell to cell","type":"exact"}],"termid":"GO:1900202"}


id: GO:0042863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the siderochrome pyochelin (2-(2-o-hydroxyphenyl-2-thiazolin-4-yl)-3-methylthiazolidine-4-carboxylic acid).","definition_xrefs":["PMID:6794030","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"siderophore metabolic process","termid":"GO:0009237"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"pyochelin metabolic process","synonyms":[{"name":"pyochelin metabolism","type":"exact"}],"termid":"GO:0042863"}


id: PBO:0050039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR beta 7 (pseudogene)","termid":"PBO:0050039"}


id: FYPO:0002052
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the frequency of occurrence of ascospore formation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000003"],"is_obsolete":false,"name":"normal sporulation frequency","synonyms":[{"name":"normal ascospore formation frequency","type":"exact"},{"name":"normal sporulation occurrence","type":"exact"}],"termid":"FYPO:0002052"}


id: PBO:0069553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 824, pseudogene","termid":"PBO:0069553"}


id: PBO:0057690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1279","termid":"PBO:0057690"}


id: PATO:0000275
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000275 gestational period (obsolete PATO:0000275)","termid":"PATO:0000275"}


id: PBO:0040443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 8B4 (putative)","termid":"PBO:0040443"}


id: MONDO:0004073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dentin dysplasia (obsolete MONDO:0004073)","termid":"MONDO:0004073","xrefs":{"Monarch":{"xref_id":"0004073"}}}


id: CHEBI:16240
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrogen peroxide","termid":"CHEBI:16240"}


id: GO:0102700
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate(3-) = alpha-thujene + diphosphoric acid.","definition_xrefs":["MetaCyc:RXN-5105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"alpha-thujene synthase activity","termid":"GO:0102700"}


id: MONDO:0019194
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Localised lipodystrophies are characterized by loss of subcutaneous tissue from small regions of the body.","definition_xrefs":["Orphanet:79088"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"acquired lipodystrophy","termid":"MONDO:0020089"},{"relation_name":"is_a","term_name":"lipodystrophy","termid":"MONDO:0006573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"localized lipodystrophy","secondary_identifiers":["GARD:5867","MEDGEN:1385527","UMLS:C4329999","NCIT:C131814"],"synonyms":[{"name":"centrifugal lipodystrophy (subtype)","type":"related"},{"name":"drug-induced localised lipodystrophy (subtype)","type":"related"},{"name":"drug-induced localized lipodystrophy (subtype)","type":"related"},{"name":"focal lipodystrophy","type":"exact"},{"name":"idiopathic localised lipodystrophy (subtype)","type":"related"},{"name":"idiopathic localized lipodystrophy (subtype)","type":"related"},{"name":"panniculitis and localised lipodystrophy (subtype)","type":"related"},{"name":"panniculitis and localized lipodystrophy (subtype)","type":"related"},{"name":"pressure-induced localised lipoatrophy (subtype)","type":"related"},{"name":"pressure-induced localized lipoatrophy (subtype)","type":"related"}],"termid":"MONDO:0019194","xrefs":{"Monarch":{"xref_id":"0019194"}}}


id: GO:0050768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of neurogenesis, the generation of cells within the nervous system.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"regulation of neurogenesis","termid":"GO:0050767"},{"relation_name":"is_a","term_name":"negative regulation of nervous system development","termid":"GO:0051961"},{"relation_name":"negatively_regulates","term_name":"neurogenesis","termid":"GO:0022008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neurogenesis","synonyms":[{"name":"down regulation of neurogenesis","type":"exact"},{"name":"down-regulation of neurogenesis","type":"exact"},{"name":"downregulation of neurogenesis","type":"exact"},{"name":"inhibition of neurogenesis","type":"narrow"}],"termid":"GO:0050768"}


id: SO:0002229
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant extending the CDS at the 3' end, that causes elongation of the resulting polypeptide sequence at the C terminus.","definition_xrefs":["PMID:15864293","PMID:27984720","PMID:32020195","PMID:31216041","PMID:14732127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDS_extension","termid":"SO:0002227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDS_three_prime_extension","synonyms":[{"name":"CDS Extension 3 prime","type":"exact"},{"name":"CDS Extension three prime","type":"exact"},{"name":"elongated CDS three prime","type":"exact"},{"name":"elongated_CDS_three_prime","type":"exact"}],"termid":"SO:0002229"}


id: GO:1990512
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Nuclear transcriptional repressor complex that is capable of negatively regulating CLOCK-BMAL-dependent transactivation of genes in a delayed negative feedback manner which generates circadian rhythms.","definition_xrefs":["GOC:bhm","PMID:24855952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription repressor complex","termid":"GO:0017053"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"Cry-Per complex","termid":"GO:1990512"}


id: SO:0000409
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A biological_region of sequence that, in the molecule, interacts selectively and non-covalently with other molecules. A region on the surface of a molecule that may interact with another molecule. When applied to polypeptides: Amino acids involved in binding or interactions. It can also apply to an amino acid bond which is represented by the positions of the two flanking amino acids.","definition_xrefs":["SO:ke","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binding_site","secondary_identifiers":["http://en.wikipedia.org/wiki/Binding_site","BS:00033"],"synonyms":[{"name":"INSDC_feature:misc_binding","type":"exact"},{"name":"binding site","type":"exact"},{"name":"binding_or_interaction_site","type":"exact"},{"name":"site","type":"related"}],"termid":"SO:0000409"}


id: PBO:0005156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calnexin independence factor Cif1","termid":"PBO:0005156"}


id: MONDO:0007432
data:
  {"annotated_genes":["SJAG_00737","SJAG_03258"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87852,87851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010829"},{"annotations":[87714,87713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014768"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"excluded_subClassOf","term_name":"hereditary dementia","termid":"MONDO:0015547"},{"relation_name":"excluded_subClassOf","term_name":"leukodystrophy","termid":"MONDO:0019046"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_03258":null},"genotype_count":0,"is_obsolete":false,"name":"cerebral arteriopathy with subcortical infarcts and leukoencephalopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:13945","MEDGEN:199687","NANDO:1200545","ICD9:447.8","ICD9:323.9","OMIMPS:125310","UMLS:C0751587"],"synonyms":[{"name":"CADASIL","type":"exact"},{"name":"Casil","type":"related"},{"name":"cerebral arteriopathy with subcortical infaracts and leukoencephalopathy","type":"exact"},{"name":"cerebral arteriopathy with subcortical infarcts and leukoencephalopathy","type":"exact"},{"name":"cerebral arteriopathy, autosomal dominant, with subcortical infarcts and leukoencephalopathy","type":"related"},{"name":"dementia, hereditary multi-infarct type","type":"related"}],"termid":"MONDO:0007432","terms_by_termid":{"MONDO:0010829":null,"MONDO:0014768":null},"xrefs":{"Monarch":{"xref_id":"0007432"}}}


id: PBO:0081633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF561 antisense RNA 1 (head to head)","termid":"PBO:0081633"}


id: PBO:0069776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1060, pseudogene","termid":"PBO:0069776"}


id: PBO:0055469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2902","termid":"PBO:0055469"}


id: PBO:0089385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic leucine-tRNA ligase Lrs1","termid":"PBO:0089385"}


id: PBO:0054481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1881","termid":"PBO:0054481"}


id: GO:0072290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of epithelial cells within a renal tubule that contributes to metanephric nephron tubule morphogenesis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in metanephros development","termid":"GO:0035788"},{"relation_name":"is_a","term_name":"epithelial cell migration involved in nephron tubule morphogenesis","termid":"GO:0072155"},{"relation_name":"part_of","term_name":"metanephric nephron tubule morphogenesis","termid":"GO:0072282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell migration involved in metanephric nephron tubule morphogenesis","termid":"GO:0072290"}


id: GO:0017088
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of the terminal bond of Xaa-Pro-Xaa motifs to release unblocked, N-terminal dipeptides from substrates including Ala-Pro-para-nitroanilide and (sequentially, at the second, fourth and sixth bonds) of the motif Tyr-Pro-Phe-Pro-Gly-Pro-Ile.","definition_xrefs":["GOC:curator"],"gene_count":0,"genotype_count":0,"name":"obsolete X-Pro dipeptidyl-peptidase activity (obsolete GO:0017088)","synonyms":[{"name":"X-Pro dipeptidyl-peptidase activity","type":"exact"},{"name":"Xaa-Pro dipeptidyl-peptidase activity","type":"exact"}],"termid":"GO:0017088"}


id: PR:O60164
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pescadillo that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12221:SF6","OMA:SCHPO03820","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pescadillo homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F5.05c","secondary_identifiers":["UniProtKB:O60164"],"synonyms":[{"name":"Spom972h-PES1","type":"exact"},{"name":"nucleolar protein 7 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60164"}


id: GO:0004488
data:
  {"annotated_genes":["SJAG_00106","SJAG_04156","SJAG_01126"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57915,77440,78327],"is_not":false,"summary":null,"term":"GO:0004488"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,10-methylenetetrahydrofolate + NADP+ = 5,10-methenyltetrahydrofolate + NADPH.","definition_xrefs":["RHEA:22812","EC:1.5.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_01126":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase (NADP+) activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:METHYLENETHFDEHYDROG-NADP-RXN","KEGG_REACTION:R01220"],"synonyms":[{"name":"5,10-methylenetetrahydrofolate:NADP oxidoreductase activity","type":"related"},{"name":"5,10-methylenetetrahydrofolate:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0004488","terms_by_termid":{"GO:0004488":null}}


id: PBO:0078886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 1-3","termid":"PBO:0078886"}


id: GO:0061271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where a mesenchymal cell establishes apical/basolateral polarity,forms intercellular adhesive junctions, synthesizes basement membrane components and becomes an epithelial cell that will contribute to the shaping of the mesonephric renal vesicle.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal to epithelial transition involved in mesonephros morphogenesis","termid":"GO:0061261"},{"relation_name":"is_a","term_name":"mesenchymal to epithelial transition involved in renal vesicle formation","termid":"GO:0072036"},{"relation_name":"part_of","term_name":"mesonephric renal vesicle formation","termid":"GO:0061262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal to epithelial transition involved in mesonephric renal vesicle formation","termid":"GO:0061271"}


id: GO:0044271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of organic and inorganic nitrogenous compounds.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular nitrogen compound biosynthetic process (obsolete GO:0044271)","termid":"GO:0044271"}


id: PBO:0002298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease kappa ortholog (predicted)","termid":"PBO:0002298"}


id: PBO:0054138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1504","termid":"PBO:0054138"}


id: GO:0004503
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tyrosine + O2 = L-DOPAquinone + H2O. This reaction can use both monophenols (such as tyrosine) and catechols (o-diphenols) as substrates.","definition_xrefs":["PMID:4965136","RHEA:18117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen","termid":"GO:0016716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"tyrosinase activity","secondary_identifiers":["EC:1.14.18.1","MetaCyc:MONOPHENOL-MONOOXYGENASE-RXN"],"synonyms":[{"name":"L-tyrosine monooxygenase activity","type":"exact"},{"name":"N-acetyl-6-hydroxytryptophan oxidase activity","type":"related"},{"name":"catecholase","type":"related"},{"name":"chlorogenic acid oxidase activity","type":"related"},{"name":"chlorogenic oxidase activity","type":"related"},{"name":"cresolase activity","type":"related"},{"name":"dopa oxidase","type":"related"},{"name":"monophenol monooxidase activity","type":"related"},{"name":"monophenol monooxygenase activity","type":"exact"},{"name":"monophenol oxidase activity","type":"related"},{"name":"monophenol oxygenase","type":"exact"},{"name":"monophenolase activity","type":"related"},{"name":"o-diphenol oxidase activity","type":"related"},{"name":"o-diphenol oxidoreductase","type":"related"},{"name":"o-diphenol:O2 oxidoreductase activity","type":"related"},{"name":"phenol oxidase activity","type":"broad"},{"name":"phenolase activity","type":"broad"},{"name":"prophenol oxidase activity","type":"related"},{"name":"prophenoloxidase activity","type":"related"},{"name":"pyrocatechol oxidase","type":"broad"},{"name":"tyrosine-dopa oxidase activity","type":"related"}],"termid":"GO:0004503"}


id: PBO:0090900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane basic amino acid transmembrane transporter","termid":"PBO:0090900"}


id: PBO:0070484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 19","termid":"PBO:0070484"}


id: FYPO:0006720
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to osmotic stress is normal (i.e. indistinguishable from wild type). Normally, cell cycle progression is slowed or arrested transiently following exposure to osmotic stress.","definition_xrefs":["PMID:28924043","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal cell cycle regulation during cellular response to osmotic stress","synonyms":[{"name":"normal cell cycle delay following osmotic stress","type":"narrow"},{"name":"normal cell cycle regulation during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"normal cell cycle regulation during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"normal cell cycle regulation in response to osmotic stress","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to osmotic stress","type":"exact"}],"termid":"FYPO:0006720"}


id: PBO:0031487
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_spindle","termid":"PBO:0031487"}


id: GO:0015956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a bis(5'-nucleosidyl) oligophosphate, a compound formed of two nucleosides joined together through their 5' carbons by a chain of phosphate molecules.","definition_xrefs":["PMID:10970777","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"bis(5'-nucleosidyl) oligophosphate metabolic process","synonyms":[{"name":"bis(5'-nucleosidyl) oligophosphate metabolism","type":"exact"}],"termid":"GO:0015956"}


id: GO:0019389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving glucuronosides, any compound formed by combination in glycosidic linkage of a hydroxy compound with the anomeric carbon atom of a glucuronate.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete glucuronoside metabolic process (obsolete GO:0019389)","synonyms":[{"name":"glucuronide metabolic process","type":"exact"},{"name":"glucuronide metabolism","type":"exact"},{"name":"glucuronoside metabolism","type":"exact"}],"termid":"GO:0019389"}


id: PR:Q9USZ2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transportin-3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02991","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C11G11.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11G11.07","secondary_identifiers":["UniProtKB:Q9USZ2"],"synonyms":[{"name":"Spom972h-TNPO3","type":"exact"}],"termid":"PR:Q9USZ2"}


id: PBO:0044381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 1 subfamily D member 1, pseudogene","termid":"PBO:0044381"}


id: GO:0036255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methylamine stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amine","termid":"GO:0014075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to methylamine","termid":"GO:0036255"}


id: PBO:0036253
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PROline requiring","termid":"PBO:0036253"}


id: GO:0075227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of an encysted zoospore germination.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spore germination","termid":"GO:1904359"},{"relation_name":"regulates","term_name":"encysted zoospore germination","termid":"GO:0075226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of encysted zoospore germination","synonyms":[{"name":"modulation of encysted zoospore germination on or near host","type":"exact"},{"name":"regulation of encysted zoospore germination on or near host","type":"narrow"}],"termid":"GO:0075227"}


id: GO:0047117
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: acyl-[acyl-carrier protein] + NADP+ = trans-D2-enoyl-[acyl-carrier protein] + NADPH + H+.","definition_xrefs":["MetaCyc:1.3.1.39-RXN","EC:1.3.1.39"],"gene_count":0,"genotype_count":0,"name":"obsolete enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity (obsolete GO:0047117)","synonyms":[{"name":"acyl-acyl-carrier-protein:NADP+ oxidoreductase (A-specific)","type":"related"},{"name":"enoyl-ACP reductase (NADPH, A-specific) activity","type":"exact"},{"name":"enoyl-ACp reductase activity","type":"related"},{"name":"enoyl-[acyl-carrier protein] reductase (NADPH, A-specific) activity","type":"exact"},{"name":"enoyl-acyl carrier protein (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"related"},{"name":"enoyl-acyl-carrier-protein reductase (NADPH, A-specific)","type":"related"}],"termid":"GO:0047117"}


id: GO:0034131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 1 signaling pathway.","definition_xrefs":["PMID:16551253","GOC:add","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"},{"relation_name":"regulates","term_name":"toll-like receptor 1 signaling pathway","termid":"GO:0034130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of toll-like receptor 1 signaling pathway","synonyms":[{"name":"regulation of TLR1 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 1 signalling pathway","type":"exact"}],"termid":"GO:0034131"}


id: PBO:0005210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA ligase Lig4","termid":"PBO:0005210"}


id: PBO:0056431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 4","termid":"PBO:0056431"}


id: MONDO:0010799
data:
  {"annotated_genes":["SJAG_00358"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86796,89077],"is_not":false,"summary":null,"term":"MONDO:0010799"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"postlingual non-syndromic genetic hearing loss","termid":"MONDO:0016298"},{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00358":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"deafness, aminoglycoside-induced","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:168609","MEDGEN:374074","GARD:18161","UMLS:C1838854","DOID:0111734","MESH:C564013","OMIM:580000"],"synonyms":[{"name":"aminoglycoside-induced deafness","type":"exact"},{"name":"aminoglycoside-induced hearing loss","type":"broad"},{"name":"deafness, aminoglycoside-induced","type":"exact"},{"name":"deafness, mitochondrial, modifier of, mitochondrial","type":"exact"},{"name":"deafness, streptomycin-induced","type":"exact"},{"name":"mitochondrial isolated neurosensory deafness with susceptibility to aminoglycoside exposure","type":"exact"},{"name":"mitochondrial isolated neurosensory hearing loss with susceptibility to aminoglycoside exposure","type":"broad"},{"name":"mitochondrial isolated sensorineural deafness with susceptibility to aminoglycoside exposure","type":"exact"},{"name":"mitochondrial isolated sensorineural hearing loss with susceptibility to aminoglycoside exposure","type":"broad"},{"name":"mitochondrial non-syndromic neurosensory deafness with susceptibility to aminoglycoside exposure","type":"exact"},{"name":"mitochondrial non-syndromic neurosensory hearing loss with susceptibility to aminoglycoside exposure","type":"broad"},{"name":"mitochondrial non-syndromic sensorineural deafness with susceptibility to aminoglycoside exposure","type":"exact"},{"name":"mitochondrial non-syndromic sensorineural hearing loss with susceptibility to aminoglycoside exposure","type":"broad"},{"name":"streptomycin ototoxicity","type":"exact"}],"termid":"MONDO:0010799","terms_by_termid":{"MONDO:0010799":null},"xrefs":{"Monarch":{"xref_id":"0010799"}}}


id: GO:0045838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of membrane potential","synonyms":[{"name":"activation of membrane potential","type":"narrow"},{"name":"elevation of membrane potential","type":"exact"},{"name":"stimulation of membrane potential","type":"narrow"},{"name":"up regulation of membrane potential","type":"exact"},{"name":"up-regulation of membrane potential","type":"exact"},{"name":"upregulation of membrane potential","type":"exact"}],"termid":"GO:0045838"}


id: SO:0001564
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant where the structure of the gene is changed.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_variant","termid":"SO:0001878"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"Jannovar:gene_variant","type":"exact"},{"name":"VAAST:gene_variant","type":"exact"},{"name":"gene structure variant","type":"exact"},{"name":"snpEff:GENE","type":"exact"}],"termid":"SO:0001564"}


id: PBO:0110200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p23 homolog, Hsp90 co-chaperone Wos2","termid":"PBO:0110200"}


id: PBO:0027635
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_exocytosis","termid":"PBO:0027635"}


id: _global:regulates_level_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"p regulates levels of c if p regulates some amount (PATO:0000070) of c","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"_global:functionally_related_to"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_levels_of","secondary_identifiers":["RO:0002332","GOREL:0000036"],"termid":"_global:regulates_level_of"}


id: FYPO:0004113
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that does not divide, and that is smaller than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable small vegetative cell","termid":"FYPO:0000951"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division","termid":"FYPO:0001991"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000005","FYPO:0000002","FYPO:0000004","FYPO:0001985"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, small cell","synonyms":[{"name":"inviable after spore germination, undivided small cell","type":"exact"},{"name":"inviable following spore germination, without cell division, small cell","type":"exact"},{"name":"inviable germinated spore, without cell division, small cell","type":"exact"},{"name":"lethal after spore germination, without cell division, small cell","type":"exact"}],"termid":"FYPO:0004113"}


id: PBO:0004382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L36","termid":"PBO:0004382"}


id: FYPO:0007387
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the switch from the monopolar to bipolar mode of cell growth (new end take-off; NETO) does not occur, and the cell grows only from the new end.","definition_xrefs":["PMID:12007420","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished NETO","termid":"FYPO:0001018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005568"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005568"],"is_obsolete":false,"name":"abolished NETO, with growth from new end","synonyms":[{"name":"NETO abolished, with growth from new end","type":"exact"},{"name":"abolished NETO during vegetative growth, with growth from new end","type":"exact"},{"name":"abolished NETO, with cell growth from new end","type":"exact"},{"name":"abolished NETO, with growth from new end during mitotic cell cycle","type":"related"},{"name":"abolished NETO, with growth from new end during vegetative growth","type":"exact"},{"name":"abolished NETO, with monopolar growth from new end","type":"exact"},{"name":"abolished cell growth mode switching, monopolar to bipolar, with growth from new end","type":"exact"},{"name":"abolished new end take-off, with growth from new end","type":"exact"},{"name":"abolished switch from monopolar to bipolar cell growth, with cell growth from new end","type":"exact"},{"name":"abolished switch from monopolar to bipolar cell growth, with growth from new end","type":"exact"}],"termid":"FYPO:0007387"}


id: MONDO:0003221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete sclerosing hemangioma (obsolete MONDO:0003221)","termid":"MONDO:0003221","xrefs":{"Monarch":{"xref_id":"0003221"}}}


id: PBO:0046290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EML6 antisense RNA 1","termid":"PBO:0046290"}


id: PBO:0035790
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_endoplasmic_reticulum_stress","termid":"PBO:0035790"}


id: PBO:0082236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-glucoside permease; transports maltose, maltotriose, alpha-methylglucoside, and turanose; identical to Mph2p; encoded in a subtelomeric position in a region likely to have undergone duplication","termid":"PBO:0082236"}


id: PBO:0056950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 16-2","termid":"PBO:0056950"}


id: MONDO:0024553
data:
  {"annotated_genes":["SJAG_00319","SJAG_00088"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88693,88694],"is_not":false,"summary":null,"term":"MONDO:0024553"}]},"cv_name":"mondo","definition":"Any myopathy, lactic acidosis, and sideroblastic anemia in which the cause of the disease is a mutation in the PUS1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopathy, lactic acidosis, and sideroblastic anemia","termid":"MONDO:0000863"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00088":null,"SJAG_00319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005570","MONDO:0002280","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"myopathy, lactic acidosis, and sideroblastic anemia 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:600462","DOID:0111185","UMLS:C4551958","MEDGEN:1634824"],"synonyms":[{"name":"MLASA1","type":"related"},{"name":"PUS1 myopathy, lactic acidosis, and sideroblastic anaemia","type":"exact"},{"name":"PUS1 myopathy, lactic acidosis, and sideroblastic anemia","type":"exact"},{"name":"mitochondrial myopathy and sideroblastic anaemia","type":"related"},{"name":"mitochondrial myopathy and sideroblastic anemia","type":"related"},{"name":"myopathy, lactic acidosis, and sideroblastic anaemia caused by mutation in PUS1","type":"exact"},{"name":"myopathy, lactic acidosis, and sideroblastic anemia 1","type":"exact"},{"name":"myopathy, lactic acidosis, and sideroblastic anemia caused by mutation in PUS1","type":"exact"}],"termid":"MONDO:0024553","terms_by_termid":{"MONDO:0024553":null},"xrefs":{"Monarch":{"xref_id":"0024553"}}}


id: PBO:0077723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trinucleotide repeat containing adaptor 6A","termid":"PBO:0077723"}


id: PBO:0113447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit l of the mitochondrial F1F0 ATP synthase; F1F0 ATP synthase is a large, evolutionarily conserved enzyme complex required for ATP synthesis; more abundant in the ATP synthase monomer; involved in the calcium-induced permeability transition and calcium homeostasis; does not impact ATP synthase activity and stability; N-terminal region has sequence similarity to Atp19p; conserved in A. gossypii; detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0113447"}


id: GO:2001010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of plant-type cell wall cellulose biosynthetic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellulose biosynthetic process","termid":"GO:2001007"},{"relation_name":"is_a","term_name":"regulation of plant-type cell wall cellulose biosynthetic process","termid":"GO:2001009"},{"relation_name":"negatively_regulates","term_name":"plant-type cell wall cellulose biosynthetic process","termid":"GO:0052324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of plant-type cell wall cellulose biosynthetic process","synonyms":[{"name":"negative regulation of cell wall cellulose biosynthesis","type":"exact"},{"name":"negative regulation of cellulose biosynthesis during cell wall biosynthesis","type":"related"}],"termid":"GO:2001010"}


id: MOD:01927
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to O4'-glycosyltyrosine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosylated residue","termid":"MOD:00396"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O-glycosyl-L-tyrosine","synonyms":[{"name":"OGlycoTyr","type":"exact"}],"termid":"MOD:01927"}


id: GO:1904247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of polynucleotide adenylyltransferase activity.","definition_xrefs":["PMID:19460348","GO_REF:0000059","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transferase activity","termid":"GO:0051347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of polynucleotide adenylyltransferase activity","synonyms":[{"name":"activation of AMP polynucleotidylexotransferase activity","type":"narrow"},{"name":"activation of ATP-polynucleotide adenylyltransferase activity","type":"narrow"},{"name":"activation of ATP:polynucleotide adenylyltransferase activity","type":"narrow"},{"name":"activation of ATP:polynucleotidylexotransferase activity","type":"narrow"},{"name":"activation of NTP polymerase activity","type":"narrow"},{"name":"activation of RNA adenylating enzyme activity","type":"narrow"},{"name":"activation of RNA formation factors, PF1","type":"related"},{"name":"activation of adenosine triphosphate:ribonucleic acid adenylyltransferase activity","type":"narrow"},{"name":"activation of poly(A) hydrolase activity","type":"narrow"},{"name":"activation of poly(A) polymerase activity","type":"narrow"},{"name":"activation of poly(A) synthetase activity","type":"narrow"},{"name":"activation of poly-A polymerase activity","type":"narrow"},{"name":"activation of polyadenylate nucleotidyltransferase activity","type":"narrow"},{"name":"activation of polyadenylate polymerase activity","type":"narrow"},{"name":"activation of polyadenylate synthetase activity","type":"narrow"},{"name":"activation of polyadenylic acid polymerase activity","type":"narrow"},{"name":"activation of polyadenylic polymerase activity","type":"narrow"},{"name":"activation of polynucleotide adenylyltransferase activity","type":"narrow"},{"name":"activation of terminal riboadenylate transferase activity","type":"narrow"},{"name":"positive regulation of AMP polynucleotidylexotransferase activity","type":"exact"},{"name":"positive regulation of ATP-polynucleotide adenylyltransferase activity","type":"exact"},{"name":"positive regulation of ATP:polynucleotide adenylyltransferase activity","type":"exact"},{"name":"positive regulation of ATP:polynucleotidylexotransferase activity","type":"exact"},{"name":"positive regulation of NTP polymerase activity","type":"exact"},{"name":"positive regulation of RNA adenylating enzyme activity","type":"exact"},{"name":"positive regulation of RNA formation factors, PF1","type":"related"},{"name":"positive regulation of adenosine triphosphate:ribonucleic acid adenylyltransferase activity","type":"exact"},{"name":"positive regulation of poly(A) hydrolase activity","type":"exact"},{"name":"positive regulation of poly(A) polymerase activity","type":"exact"},{"name":"positive regulation of poly(A) synthetase activity","type":"exact"},{"name":"positive regulation of poly-A polymerase activity","type":"exact"},{"name":"positive regulation of polyadenylate nucleotidyltransferase activity","type":"exact"},{"name":"positive regulation of polyadenylate polymerase activity","type":"exact"},{"name":"positive regulation of polyadenylate synthetase activity","type":"exact"},{"name":"positive regulation of polyadenylic acid polymerase activity","type":"exact"},{"name":"positive regulation of polyadenylic polymerase activity","type":"exact"},{"name":"positive regulation of terminal riboadenylate transferase activity","type":"exact"},{"name":"up regulation of AMP polynucleotidylexotransferase activity","type":"exact"},{"name":"up regulation of ATP-polynucleotide adenylyltransferase activity","type":"exact"},{"name":"up regulation of ATP:polynucleotide adenylyltransferase activity","type":"exact"},{"name":"up regulation of ATP:polynucleotidylexotransferase activity","type":"exact"},{"name":"up regulation of NTP polymerase activity","type":"exact"},{"name":"up regulation of RNA adenylating enzyme activity","type":"exact"},{"name":"up regulation of RNA formation factors, PF1","type":"related"},{"name":"up regulation of adenosine triphosphate:ribonucleic acid adenylyltransferase activity","type":"exact"},{"name":"up regulation of poly(A) hydrolase activity","type":"exact"},{"name":"up regulation of poly(A) polymerase activity","type":"exact"},{"name":"up regulation of poly(A) synthetase activity","type":"exact"},{"name":"up regulation of poly-A polymerase activity","type":"exact"},{"name":"up regulation of polyadenylate nucleotidyltransferase activity","type":"exact"},{"name":"up regulation of polyadenylate polymerase activity","type":"exact"},{"name":"up regulation of polyadenylate synthetase activity","type":"exact"},{"name":"up regulation of polyadenylic acid polymerase activity","type":"exact"},{"name":"up regulation of polyadenylic polymerase activity","type":"exact"},{"name":"up regulation of polynucleotide adenylyltransferase activity","type":"exact"},{"name":"up regulation of terminal riboadenylate transferase activity","type":"exact"},{"name":"up-regulation of AMP polynucleotidylexotransferase activity","type":"exact"},{"name":"up-regulation of ATP-polynucleotide adenylyltransferase activity","type":"exact"},{"name":"up-regulation of ATP:polynucleotide adenylyltransferase activity","type":"exact"},{"name":"up-regulation of ATP:polynucleotidylexotransferase activity","type":"exact"},{"name":"up-regulation of NTP polymerase activity","type":"exact"},{"name":"up-regulation of RNA adenylating enzyme activity","type":"exact"},{"name":"up-regulation of RNA formation factors, PF1","type":"related"},{"name":"up-regulation of adenosine triphosphate:ribonucleic acid adenylyltransferase activity","type":"exact"},{"name":"up-regulation of poly(A) hydrolase activity","type":"exact"},{"name":"up-regulation of poly(A) polymerase activity","type":"exact"},{"name":"up-regulation of poly(A) synthetase activity","type":"exact"},{"name":"up-regulation of poly-A polymerase activity","type":"exact"},{"name":"up-regulation of polyadenylate nucleotidyltransferase activity","type":"exact"},{"name":"up-regulation of polyadenylate polymerase activity","type":"exact"},{"name":"up-regulation of polyadenylate synthetase activity","type":"exact"},{"name":"up-regulation of polyadenylic acid polymerase activity","type":"exact"},{"name":"up-regulation of polyadenylic polymerase activity","type":"exact"},{"name":"up-regulation of polynucleotide adenylyltransferase activity","type":"exact"},{"name":"up-regulation of terminal riboadenylate transferase activity","type":"exact"},{"name":"upregulation of AMP polynucleotidylexotransferase activity","type":"exact"},{"name":"upregulation of ATP-polynucleotide adenylyltransferase activity","type":"exact"},{"name":"upregulation of ATP:polynucleotide adenylyltransferase activity","type":"exact"},{"name":"upregulation of ATP:polynucleotidylexotransferase activity","type":"exact"},{"name":"upregulation of NTP polymerase activity","type":"exact"},{"name":"upregulation of RNA adenylating enzyme activity","type":"exact"},{"name":"upregulation of RNA formation factors, PF1","type":"related"},{"name":"upregulation of adenosine triphosphate:ribonucleic acid adenylyltransferase activity","type":"exact"},{"name":"upregulation of poly(A) hydrolase activity","type":"exact"},{"name":"upregulation of poly(A) polymerase activity","type":"exact"},{"name":"upregulation of poly(A) synthetase activity","type":"exact"},{"name":"upregulation of poly-A polymerase activity","type":"exact"},{"name":"upregulation of polyadenylate nucleotidyltransferase activity","type":"exact"},{"name":"upregulation of polyadenylate polymerase activity","type":"exact"},{"name":"upregulation of polyadenylate synthetase activity","type":"exact"},{"name":"upregulation of polyadenylic acid polymerase activity","type":"exact"},{"name":"upregulation of polyadenylic polymerase activity","type":"exact"},{"name":"upregulation of polynucleotide adenylyltransferase activity","type":"exact"},{"name":"upregulation of terminal riboadenylate transferase activity","type":"exact"}],"termid":"GO:1904247"}


id: MONDO:0004318
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive small cell neuroendocrine carcinoma that arises from the ovary. Morphologically, it resembles the small cell carcinoma that arises from the lung.","definition_xrefs":["NCIT:C40440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian small cell carcinoma","termid":"MONDO:0003795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pulmonary type ovarian small cell carcinoma","secondary_identifiers":["UMLS:C1518737","DOID:7650","MEDGEN:309517"],"synonyms":[{"name":"ovarian small cell carcinoma, pulmonary type","type":"exact"}],"termid":"MONDO:0004318","xrefs":{"Monarch":{"xref_id":"0004318"}}}


id: GO:0046792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Viral interference in host cell processes that lead cell cycle arrest, allowing cell division to occur.","definition_xrefs":["PMID:9371605"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host cell cycle arrest (obsolete GO:0046792)","synonyms":[{"name":"negative regulation by virus of cell cycle arrest","type":"exact"},{"name":"viral inhibition of cell cycle arrest","type":"exact"}],"termid":"GO:0046792"}


id: PBO:0051665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of CDK, cyclin A1 interacting protein 1","termid":"PBO:0051665"}


id: MONDO:0006403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from a pleomorphic adenoma in the salivary glands. It usually originates in the parotid gland. Patients usually present with a history of a long-standing tumor mass which grew rapidly in the past few months. Patients with non-invasive or minimally invasive carcinoma have an excellent prognosis. In cases where there is invasion of the surrounding tissues, the clinical course is aggressive.","definition_xrefs":["NCIT:C40410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland carcinoma","termid":"MONDO:0000521"},{"relation_name":"is_a","term_name":"carcinoma ex pleomorphic adenoma","termid":"MONDO:0002472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"salivary gland carcinoma ex pleomorphic adenoma","secondary_identifiers":["DOID:297","EFO:1000516","MEDGEN:274190","UMLS:C1519172"],"synonyms":[{"name":"pleomorphic adenoma carcinoma","type":"related"},{"name":"saliva-secreting gland carcinoma ex pleomorphic adenoma","type":"exact"},{"name":"salivary gland carcinoma ex pleomorphic adenoma","type":"exact"}],"termid":"MONDO:0006403","xrefs":{"Monarch":{"xref_id":"0006403"}}}


id: PBO:0028142
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_cellular_response_to_oxidative_stress","termid":"PBO:0028142"}


id: PBO:0113144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein (GAP) subunit of the Iml1p/SEACIT complex; SEACIT (Iml1p-Npr2p-Npr3p) is required for non-nitrogen-starvation (NNS)-induced autophagy, and is a subcomplex of the SEA, a coatomer-related complex that associates with the vacuole; Iml1p functions as a GAP for the Rag family GTPase Gtr1p (EGOC subunit) in SEACIT, resulting in the inhibition of TORC1 signaling in response to amino acid deprivation; role in the oxidative stress response","termid":"PBO:0113144"}


id: PBO:0082756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the septin ring that is required for cytokinesis; present at the ends of rod-like septin hetero-oligomers; C-terminal extension is important for recruitment of Bni5p to the mother-bud neck, which in turn is required for Myo1p recruitment and cytokinesis; undergoes sumoylation and phosphorylation during mitosis; protein abundance increases in response to DNA replication stress","termid":"PBO:0082756"}


id: MONDO:0030037
data:
  {"annotated_genes":["SJAG_03672"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87187],"is_not":false,"summary":null,"term":"MONDO:0030037"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"},{"relation_name":"is_a","term_name":"disorder of GPI anchor biosynthesis","termid":"MONDO:0024321"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03672":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0002525","MONDO:0005066","MONDO:0002320","MONDO:0024322"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia and cerebellar atrophy, with or without seizures","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5394372","MEDGEN:1710849","OMIM:618879"],"synonyms":[{"name":"Glycosylphosphatidylinositol Biosynthesis Defect 22","type":"exact"},{"name":"NEDHCAS","type":"exact"},{"name":"NEURODEVELOPMENTAL DISORDER WITH HYPOTONIA AND CEREBELLAR ATROPHY, WITH OR WITHOUT SEIZURES","type":"exact"},{"name":"neurodevelopmental disorder with hypotonia and cerebellar atrophy, with or without seizures","type":"exact"}],"termid":"MONDO:0030037","terms_by_termid":{"MONDO:0030037":null},"xrefs":{"Monarch":{"xref_id":"0030037"}}}


id: PBO:0030909
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_level_of_substance_in_cell_during_vegetative_growth","termid":"PBO:0030909"}


id: MONDO:0015857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare non-malformative gynecologic or obstetric disease (obsolete MONDO:0015857)","secondary_identifiers":["Orphanet:180199"],"termid":"MONDO:0015857","xrefs":{"Monarch":{"xref_id":"0015857"}}}


id: SO:0000954
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, DNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"DNA","termid":"SO:0000352"},{"relation_name":"is_a","term_name":"chromosome","termid":"SO:0000340"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA_chromosome","synonyms":[{"name":"DNA chromosome","type":"exact"}],"termid":"SO:0000954"}


id: MOD:01115
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an L-tryptophan residue with a group derived from an isoprene polymer, such as a geranyl (C10), farnesyl (C15) or geranylgeranyl (C20).","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenylated residue","termid":"MOD:00703"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"isoprenylated tryptophan","synonyms":[{"name":"IpTrp","type":"exact"}],"termid":"MOD:01115"}


id: GO:0052605
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,3-dimethyl-6-phytyl-1,4-benzoquinone = gamma-tocopherol.","definition_xrefs":["PMID:12213958"],"gene_count":0,"genotype_count":0,"name":"obsolete gamma-tocopherol cyclase activity (obsolete GO:0052605)","termid":"GO:0052605"}


id: PBO:0073699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"src kinase associated phosphoprotein 1","termid":"PBO:0073699"}


id: MONDO:0027766
data:
  {"annotated_genes":["SJAG_00946","SJAG_01537","SJAG_01957"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012071"},{"annotations":[86876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010020"},{"annotations":[87900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958023"}]},"cv_name":"mondo","definition":"Almost complete absence of subcutaneous and/or visceral adipose tissue.","definition_xrefs":["NCIT:C131815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipodystrophy","termid":"MONDO:0006573"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00946":null,"SJAG_01537":null,"SJAG_01957":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"generalized lipodystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4317112","DOID:0080298","MEDGEN:1369615","HP:0009064"],"synonyms":[{"name":"complete generalised lipodystrophy","type":"exact"},{"name":"complete generalized lipodystrophy","type":"exact"}],"termid":"MONDO:0027766","terms_by_termid":{"MONDO:0010020":null,"MONDO:0012071":null,"MONDO:0958023":null},"xrefs":{"Monarch":{"xref_id":"0027766"}}}


id: GO:0008308
data:
  {"annotated_genes":["SJAG_00048"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73426],"is_not":false,"summary":null,"term":"GO:0008308"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an anion by a voltage-gated channel. An anion is a negatively charged ion. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated monoatomic ion channel activity","termid":"GO:0005244"},{"relation_name":"is_a","term_name":"monoatomic anion channel activity","termid":"GO:0005253"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"voltage-gated monoatomic anion channel activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0022844","Reactome:R-HSA-9012374"],"synonyms":[{"name":"voltage-dependent ion-selective channel activity","type":"related"},{"name":"voltage-gated anion channel activity","type":"broad"},{"name":"voltage-gated ion-selective channel activity","type":"related"}],"termid":"GO:0008308","terms_by_termid":{"GO:0008308":null}}


id: PBO:0071714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 12","termid":"PBO:0071714"}


id: PR:Q10265
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A heat shock cognate 71 kDa protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein ssa1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.02c","secondary_identifiers":["UniProtKB:Q10265"],"synonyms":[{"name":"Spom972h-HSPA8","type":"exact"}],"termid":"PR:Q10265"}


id: PBO:0078039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 29","termid":"PBO:0078039"}


id: GO:0070263
data:
  {"annotated_genes":["SJAG_04720","SJAG_01755","SJAG_01975","SJAG_04723","SJAG_00239"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[104540,104793,104794,108689,118425],"is_not":false,"summary":null,"term":"GO:0070263"}]},"cv_name":"cellular_component","definition":"The side of the fungal-type cell wall that is opposite to the side that faces the cell and its contents.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external side of cell wall","termid":"GO:0010339"},{"relation_name":"part_of","term_name":"fungal-type cell wall","termid":"GO:0009277"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00239":null,"SJAG_01755":null,"SJAG_01975":null,"SJAG_04720":null,"SJAG_04723":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005618"},{"rel_name":"part_of","termid":"GO:0009986"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0009986","GO:0005618","GO:0005575"],"is_obsolete":false,"name":"external side of fungal-type cell wall","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070263","terms_by_termid":{"GO:0070263":null}}


id: PBO:0018071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-5' exoribonuclease subunit Dis3","termid":"PBO:0018071"}


id: GO:0005134
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-2 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"interleukin-2 receptor binding","synonyms":[{"name":"IL-2","type":"narrow"},{"name":"interleukin-2 receptor ligand","type":"narrow"}],"termid":"GO:0005134"}


id: MONDO:0007685
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"granulosis rubra nasi","secondary_identifiers":["icd11.foundation:1871134805","MEDGEN:78096","OMIM:139000","SCTID:22818000","MESH:C562483","ICD9:705.89","UMLS:C0263471"],"synonyms":[{"name":"granulosis rubra nasi","type":"exact"}],"termid":"MONDO:0007685","xrefs":{"Monarch":{"xref_id":"0007685"}}}


id: MONDO:0008842
data:
  {"annotated_genes":["SJAG_04410"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87199],"is_not":false,"summary":null,"term":"MONDO:0008842"}]},"cv_name":"mondo","definition":"A rare autosomal recessive cerebellar ataxia (ARCA), characterized by progressive cerebellar ataxia associated with oculomotor apraxia, severe neuropathy, and hypoalbuminemia.","definition_xrefs":["Orphanet:1168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ataxia-telangiectasia-like disorder","termid":"MONDO:0011457"},{"relation_name":"is_a","term_name":"DNA repair disease","termid":"MONDO:0021190"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021190"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0021190","MONDO:0005066"],"is_obsolete":false,"name":"ataxia, early-onset, with oculomotor apraxia and hypoalbuminemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:395301","GARD:9283","MESH:C538013","DOID:0050754","NANDO:1200051","OMIM:208920","UMLS:C1859598"],"synonyms":[{"name":"AOA1","type":"exact"},{"name":"APTX oculomotor apraxia or related oculomotor disease","type":"exact"},{"name":"EAOH","type":"related"},{"name":"EOCA-HA","type":"related"},{"name":"ataxia with oculomotor apraxia type 1","type":"exact"},{"name":"ataxia, adult-onset, with oculomotor apraxia","type":"related"},{"name":"ataxia, early-onset, with oculomotor apraxia and hypoalbuminemia","type":"exact"},{"name":"ataxia-oculomotor apraxia 1","type":"related"},{"name":"ataxia-oculomotor apraxia syndrome","type":"related"},{"name":"ataxia-oculomotor apraxia type 1","type":"related"},{"name":"ataxia-telangiectasia-like syndrome","type":"related"},{"name":"cerebellar ataxia, early-onset, with hypoalbuminemia","type":"related"},{"name":"early-onset ataxia with oculomotor apraxia and hypoalbuminemia","type":"related"},{"name":"early-onset cerebellar ataxia with hypoalbuminemia","type":"related"},{"name":"oculomotor apraxia or related oculomotor disease caused by mutation in APTX","type":"exact"}],"termid":"MONDO:0008842","terms_by_termid":{"MONDO:0008842":null},"xrefs":{"Monarch":{"xref_id":"0008842"}}}


id: PBO:0066804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 103","termid":"PBO:0066804"}


id: PBO:0017986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane amino acid transmembrane transporter Fnx1","termid":"PBO:0017986"}


id: GO:0010933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate, or extent of B cell tolerance induction.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tolerance induction","termid":"GO:0002645"},{"relation_name":"is_a","term_name":"regulation of macrophage tolerance induction","termid":"GO:0010932"},{"relation_name":"positively_regulates","term_name":"macrophage tolerance induction","termid":"GO:0010931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage tolerance induction","termid":"GO:0010933"}


id: PBO:0053014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 pseudogene 1","termid":"PBO:0053014"}


id: PBO:0091325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial electron transfer flavoprotein-ubiquinone oxidoreductase Cir2","termid":"PBO:0091325"}


id: GO:0009245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lipid A, the glycolipid group of bacterial lipopolysaccharides, consisting of four to six fatty acyl chains linked to two glucosamine residues. Further modifications of the backbone are common.","definition_xrefs":["PMID:22216004","ISBN:0198506732","PMID:20974832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"glycolipid biosynthetic process","termid":"GO:0009247"},{"relation_name":"is_a","term_name":"lipid A metabolic process","termid":"GO:0046493"},{"relation_name":"is_a","term_name":"lipooligosaccharide biosynthetic process","termid":"GO:1901271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lipid A biosynthetic process","secondary_identifiers":["MetaCyc:NAGLIPASYN-PWY"],"synonyms":[{"name":"lipid A anabolism","type":"exact"},{"name":"lipid A biosynthesis","type":"exact"},{"name":"lipid A formation","type":"exact"},{"name":"lipid A synthesis","type":"exact"}],"termid":"GO:0009245"}


id: PBO:0002844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase Snf21","termid":"PBO:0002844"}


id: GO:0051978
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of lysophospholipids from one side of a membrane to the other. A lysophospholipid is a phospholipid that lacks one of its fatty acyl chains; it is an intermediate formed during digestion of dietary and biliary phospholipids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transporter activity","termid":"GO:0005548"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"},{"relation_name":"is_a","term_name":"organophosphate ester transmembrane transporter activity","termid":"GO:0015605"},{"relation_name":"is_a","term_name":"lipid transmembrane transporter activity","termid":"GO:0170055"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"lysophospholipid:sodium symporter activity","synonyms":[{"name":"lysophospholipid transporter activity","type":"broad"}],"termid":"GO:0051978"}


id: PBO:0047212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 222 member A","termid":"PBO:0047212"}


id: PR:O13687
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vma4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase subunit E (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.07","synonyms":[{"name":"Spom972h-vma4","type":"exact"},{"name":"V-ATPase subunit E (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump subunit E (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13687"}


id: PBO:0027132
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_late_meiotic_gene_mRNA_during_meiotic_cell_cycle","termid":"PBO:0027132"}


id: PBO:0004022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial PPR repeat protein Ppr3","termid":"PBO:0004022"}


id: FYPO:0004710
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed when the cell undergoes transition from G0 phase to G1 in which the number of sites at which the protein Rad52 (also called Rad22) accumulates is greater than normal.","definition_xrefs":["PMID:19197239","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of Rad52 foci","termid":"FYPO:0004709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased number of Rad52 foci during G0 to G1 transition","synonyms":[{"name":"increased number of Rad22 foci during G0 to G1 transition","type":"exact"},{"name":"increased number of Rad52 foci during cell cycle re-entry","type":"exact"},{"name":"increased number of Rad52 foci during cell quiescence to G1 transition","type":"exact"},{"name":"increased number of Rad52 foci during exit from cell quiescence","type":"exact"},{"name":"increased number of Rad52 foci during quiescence to G1 transition","type":"exact"},{"name":"increased number of Rad52 foci during recovery from quiescence","type":"exact"}],"termid":"FYPO:0004710"}


id: PBO:0017416
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-derives_from","termid":"PBO:0017416"}


id: MONDO:0002714
data:
  {"annotated_genes":["SJAG_01671","SJAG_00260","SJAG_01895","SJAG_05313","SJAG_04755"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011121"},{"annotations":[87415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007273"},{"annotations":[87625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013602"},{"annotations":[89141,89142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013224"}]},"cv_name":"mondo","definition":"A malignant neoplasm involving the central nervous system","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system cancer","termid":"MONDO:0005872"},{"relation_name":"is_a","term_name":"central nervous system neoplasm","termid":"MONDO:0006130"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01671":null,"SJAG_01895":null,"SJAG_04755":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"central nervous system cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:87593","NCIT:C4627","DOID:3620","MESH:D016543","ICD9:239.7","NCIT:C9293","EFO:0000326","SCTID:126951006","UMLS:C0348374","NANDO:2100007"],"synonyms":[{"name":"CNS cancer","type":"exact"},{"name":"CNS malignant neoplasms","type":"exact"},{"name":"CNS neoplasm","type":"broad"},{"name":"CNS neoplasms, malignant","type":"exact"},{"name":"cancer of CNS","type":"exact"},{"name":"cancer of central nervous system","type":"exact"},{"name":"cancer of the CNS","type":"exact"},{"name":"cancer of the central nervous system","type":"exact"},{"name":"central nervous system cancer","type":"exact"},{"name":"central nervous system neoplasms, malignant","type":"exact"},{"name":"central nervous system tumor","type":"broad"},{"name":"central nervous system tumors","type":"exact"},{"name":"central nervous system tumour","type":"broad"},{"name":"central nervous system tumours","type":"exact"},{"name":"malignant CNS neoplasm","type":"exact"},{"name":"malignant CNS neoplasms","type":"exact"},{"name":"malignant CNS tumor","type":"exact"},{"name":"malignant CNS tumour","type":"exact"},{"name":"malignant central nervous system neoplasm","type":"exact"},{"name":"malignant central nervous system tumor","type":"exact"},{"name":"malignant central nervous system tumour","type":"exact"},{"name":"malignant neoplasm of CNS","type":"exact"},{"name":"malignant neoplasm of central nervous system","type":"exact"},{"name":"malignant neoplasm of the CNS","type":"exact"},{"name":"malignant neoplasm of the central nervous system","type":"exact"},{"name":"malignant tumor of CNS","type":"exact"},{"name":"malignant tumor of central nervous system","type":"exact"},{"name":"malignant tumor of the CNS","type":"exact"},{"name":"malignant tumor of the central nervous system","type":"exact"},{"name":"malignant tumour of CNS","type":"exact"},{"name":"malignant tumour of central nervous system","type":"exact"},{"name":"malignant tumour of the CNS","type":"exact"},{"name":"malignant tumour of the central nervous system","type":"exact"}],"termid":"MONDO:0002714","terms_by_termid":{"MONDO:0007273":null,"MONDO:0011121":null,"MONDO:0013224":null,"MONDO:0013602":null},"xrefs":{"Monarch":{"xref_id":"0002714"}}}


id: PBO:0068319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 19B","termid":"PBO:0068319"}


id: PBO:0119988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLCL2 upstream transcript","termid":"PBO:0119988"}


id: PBO:0092011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNA binding endonuclease (intron encoded)","termid":"PBO:0092011"}


id: MONDO:0001412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"conjunctival deposit","termid":"MONDO:0001331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"conjunctival concretion","secondary_identifiers":["MEDGEN:509822","SCTID:13706005","UMLS:C0155162","DOID:11988","ICD9:372.54"],"termid":"MONDO:0001412","xrefs":{"Monarch":{"xref_id":"0001412"}}}


id: PBO:0073431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3b subunit 1","termid":"PBO:0073431"}


id: MONDO:0014516
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any microcephaly and chorioretinopathy in which the cause of the disease is a mutation in the PLK4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microcephaly and chorioretinopathy","termid":"MONDO:0000181"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005328","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly and chorioretinopathy 2","secondary_identifiers":["DOID:0080106","MEDGEN:863825","OMIM:616171","UMLS:C4015388"],"synonyms":[{"name":"MCCRP2","type":"related"},{"name":"PLK4 microcephaly and chorioretinopathy","type":"exact"},{"name":"microcephaly and chorioretinopathy caused by mutation in PLK4","type":"exact"},{"name":"microcephaly and chorioretinopathy type 2","type":"exact"},{"name":"microcephaly and chorioretinopathy, autosomal recessive, 2","type":"related"},{"name":"microcephaly and chorioretinopathy, autosomal recessive, type 2","type":"exact"}],"termid":"MONDO:0014516","xrefs":{"Monarch":{"xref_id":"0014516"}}}


id: GO:1902140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an inositol stimulus.","definition_xrefs":["PMID:16496115","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to inositol","termid":"GO:1902140"}


id: PBO:0039399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANAPC1 pseudogene 4","termid":"PBO:0039399"}


id: PBO:0079610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2H divergent transcript","termid":"PBO:0079610"}


id: MONDO:1012640
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any von Willebrand disease that occurs in dogs and is characterized by low plasma vWF concentrations and mild to moderate bleeding symptoms due to a mutation in the VWF gene.","definition_xrefs":["OMIA:001057-9615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"Von Willebrand disease, dog","termid":"MONDO:1011612"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand disease I, dog","synonyms":[{"name":"type 1 von Willebrand disease, dog","type":"related"},{"name":"vWDI","type":"exact"}],"termid":"MONDO:1012640","xrefs":{"Monarch":{"xref_id":"1012640"}}}


id: GO:0097238
data:
  {"annotated_genes":["SJAG_02960","SJAG_04726","SJAG_02106","SJAG_01596","SJAG_04404","SJAG_02988","SJAG_04674"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61740,74579,104616,76209],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019243"},{"annotations":[61490,106879,59690],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061727"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methylglyoxal stimulus. Methylglyoxal is a 2-oxoaldehyde derived from propanal.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to methylglyoxal","termid":"GO:0051595"},{"relation_name":"is_a","term_name":"cellular response to aldehyde","termid":"GO:0110096"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01596":null,"SJAG_02106":null,"SJAG_02960":null,"SJAG_02988":null,"SJAG_04404":null,"SJAG_04674":null,"SJAG_04726":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to methylglyoxal","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0097238","terms_by_termid":{"GO:0019243":null,"GO:0061727":null}}


id: PBO:0008178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein Sls1 (predicted)","termid":"PBO:0008178"}


id: PBO:0076558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 2","termid":"PBO:0076558"}


id: GO:0050861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a B cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B cell receptor signaling pathway","termid":"GO:0050855"},{"relation_name":"is_a","term_name":"positive regulation of antigen receptor-mediated signaling pathway","termid":"GO:0050857"},{"relation_name":"positively_regulates","term_name":"B cell receptor signaling pathway","termid":"GO:0050853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of B cell receptor signaling pathway","synonyms":[{"name":"activation of B cell receptor signaling pathway","type":"narrow"},{"name":"positive regulation of B cell receptor signalling pathway","type":"exact"},{"name":"positive regulation of B lymphocyte receptor signaling pathway","type":"exact"},{"name":"positive regulation of B lymphocyte receptor signalling pathway","type":"exact"},{"name":"positive regulation of B-cell receptor signaling pathway","type":"exact"},{"name":"positive regulation of B-cell receptor signalling pathway","type":"exact"},{"name":"positive regulation of B-lymphocyte receptor signaling pathway","type":"exact"},{"name":"positive regulation of B-lymphocyte receptor signalling pathway","type":"exact"},{"name":"stimulation of B cell receptor signaling pathway","type":"narrow"},{"name":"up regulation of B cell receptor signaling pathway","type":"exact"},{"name":"up-regulation of B cell receptor signaling pathway","type":"exact"},{"name":"upregulation of B cell receptor signaling pathway","type":"exact"}],"termid":"GO:0050861"}


id: PBO:0082188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alcohol dehydrogenase isoenzyme type IV; dimeric enzyme demonstrated to be zinc-dependent despite sequence similarity to iron-activated alcohol dehydrogenases; transcription is induced in response to zinc deficiency","termid":"PBO:0082188"}


id: PBO:0059683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 49","termid":"PBO:0059683"}


id: GO:0061188
data:
  {"annotated_genes":["SJAG_03255","SJAG_02723"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79086,108485],"is_not":false,"summary":null,"term":"GO:0061188"}]},"cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of ribosomal DNA heterochromatin formation.","definition_xrefs":["GOC:dph","PMID:10388812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of heterochromatin formation","termid":"GO:0031452"},{"relation_name":"is_a","term_name":"regulation of rDNA heterochromatin formation","termid":"GO:0061187"},{"relation_name":"negatively_regulates","term_name":"rDNA heterochromatin formation","termid":"GO:0000183"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02723":null,"SJAG_03255":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006325"],"is_obsolete":false,"name":"negative regulation of rDNA heterochromatin formation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of chromatin silencing at rDNA","type":"broad"},{"name":"negative regulation of ribosomal DNA heterochromatin assembly","type":"exact"},{"name":"negative regulation of ribosomal DNA heterochromatin formation","type":"exact"}],"termid":"GO:0061188","terms_by_termid":{"GO:0061188":null}}


id: PBO:0087835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Thiol-specific peroxiredoxin; reduces hydroperoxides to protect against oxidative damage; function in vivo requires covalent conjugation to Urm1p","termid":"PBO:0087835"}


id: GO:1903995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of non-membrane spanning protein tyrosine kinase activity.","definition_xrefs":["PMID:10518561","GOC:nc","GO_REF:0000059","GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of non-membrane spanning protein tyrosine kinase activity (obsolete GO:1903995)","synonyms":[{"name":"regulation of ATP:protein-L-tyrosine O-phosphotransferase (non-specific) activity","type":"exact"},{"name":"regulation of ATP:protein-tyrosine O-phosphotransferase activity","type":"broad"},{"name":"regulation of Bruton's tyrosine kinase activity","type":"narrow"},{"name":"regulation of cytoplasmic protein tyrosine kinase activity","type":"narrow"},{"name":"regulation of focal adhesion kinase activity","type":"narrow"},{"name":"regulation of janus kinase 1 activity","type":"narrow"},{"name":"regulation of janus kinase 2 activity","type":"narrow"},{"name":"regulation of janus kinase 3 activity","type":"narrow"},{"name":"regulation of non-specific protein-tyrosine kinase activity","type":"exact"},{"name":"regulation of p60c-src protein tyrosine kinase activity","type":"narrow"}],"termid":"GO:1903995"}


id: PBO:0049792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 27","termid":"PBO:0049792"}


id: PBO:0059093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mortality factor 4 (pseudogene)","termid":"PBO:0059093"}


id: FYPO:0006916
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell executes a cell cycle phase transition normally (i.e. indistinguishably from wild type).","definition_xrefs":["PomBase:mah","GO:0044770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cell cycle phase transition","termid":"FYPO:0006916"}


id: GO:0031279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cyclase activity.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cyclase activity (obsolete GO:0031279)","termid":"GO:0031279"}


id: GO:0004707
data:
  {"annotated_genes":["SJAG_04551","SJAG_02592","SJAG_02923"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63818,66633,76440],"is_not":false,"summary":null,"term":"GO:0004707"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: protein + ATP = protein phosphate + ADP. This reaction is the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli.","definition_xrefs":["GOC:ma","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02923":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0004672","GO:0003674","GO:0140096","GO:0016301","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"MAP kinase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-198733","Reactome:R-HSA-5654566","Reactome:R-HSA-73722","GO:0016908","Reactome:R-HSA-5654562","Reactome:R-HSA-445079","Reactome:R-HSA-9825759","Reactome:R-HSA-111898","GO:0008338","Reactome:R-HSA-5654560","Reactome:R-HSA-5654565","EC:2.7.11.24","GO:0016909","MetaCyc:2.7.11.24-RXN","KEGG_REACTION:R00162","GO:0008339","Reactome:R-HSA-9626832"],"synonyms":[{"name":"ATP:protein phosphotransferase (MAPKK-activated) activity","type":"related"},{"name":"ERK","type":"related"},{"name":"ERK1","type":"exact"},{"name":"ERK2","type":"related"},{"name":"MAP kinase 1 activity","type":"narrow"},{"name":"MAP kinase 2 activity","type":"narrow"},{"name":"MAPK","type":"related"},{"name":"MBP kinase I activity","type":"narrow"},{"name":"MBP kinase II activity","type":"narrow"},{"name":"SAP kinase activity","type":"narrow"},{"name":"SAPK","type":"narrow"},{"name":"extracellular signal-regulated kinase activity","type":"narrow"},{"name":"mitogen activated kinase activity","type":"exact"},{"name":"mitogen-activated protein kinase activity","type":"related"},{"name":"myelin basic protein kinase activity","type":"narrow"},{"name":"stress-activated kinase activity","type":"narrow"},{"name":"stress-activated protein kinase activity","type":"narrow"}],"termid":"GO:0004707","terms_by_termid":{"GO:0004707":null}}


id: GO:0004427
data:
  {"annotated_genes":["SJAG_01875","SJAG_02679","SJAG_04242","SJAG_01154"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64033,71545,80523,107026],"is_not":false,"summary":null,"term":"GO:0004427"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: diphosphate + H2O = H+ + 2 phosphate.","definition_xrefs":["EC:3.6.1.1","RHEA:24576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01154":null,"SJAG_01875":null,"SJAG_02679":null,"SJAG_04242":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"inorganic diphosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-449937","MetaCyc:INORGPYROPHOSPHAT-RXN","Reactome:R-HSA-6788912","Reactome:R-HSA-71732","KEGG_REACTION:R00004"],"synonyms":[{"name":"diphosphate phosphohydrolase activity","type":"related"},{"name":"inorganic diphosphatase activity","type":"exact"},{"name":"inorganic pyrophosphatase activity","type":"related"},{"name":"pyrophosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0004427","terms_by_termid":{"GO:0004427":null}}


id: PBO:0065934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rac family small GTPase 1 pseudogene 8","termid":"PBO:0065934"}


id: PBO:0051549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 9","termid":"PBO:0051549"}


id: PBO:0029653
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_stress","termid":"PBO:0029653"}


id: MONDO:0002963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign epithelial neoplasm of the skin. It presents as a papular or nodular lesion. Morphologically, it is characterized by the presence of hyperkeratosis, acanthosis, papillomatosis, and prominent acantholysis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acanthoma","termid":"MONDO:0002093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acantholytic acanthoma","secondary_identifiers":["DOID:4324","UMLS:C1301270","MEDGEN:220970","NCIT:C27517"],"synonyms":[{"name":"acantholytic acanthoma","type":"exact"}],"termid":"MONDO:0002963","xrefs":{"Monarch":{"xref_id":"0002963"}}}


id: FYPO:0003785
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains one nucleus and no septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"has_part","term_name":"aseptate","termid":"FYPO:0000949"},{"relation_name":"is_a","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"is_a","term_name":"aseptate","termid":"FYPO:0000949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000032"],"is_obsolete":false,"name":"aseptate mononucleate vegetative cell","synonyms":[{"name":"aseptate mononucleate cell during vegetative growth","type":"exact"},{"name":"aseptate mononucleate vegetative cell during mitotic cell cycle","type":"related"},{"name":"mononucleate aseptate vegetative cell","type":"exact"},{"name":"unseptated mononucleate vegetative cell","type":"exact"}],"termid":"FYPO:0003785"}


id: PBO:0087305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ski complex component and TPR protein; mediates 3'-5' RNA degradation by the cytoplasmic exosome; null mutants have superkiller phenotype of increased viral dsRNAs and are synthetic lethal with mutations in 5'-3' mRNA decay; mutations in the human ortholog, TTC37, causes Syndromic diarrhea/Trichohepatoenteric (SD/THE) syndrome","termid":"PBO:0087305"}


id: PBO:0063790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 19","termid":"PBO:0063790"}


id: PBO:0040563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,4-N-acetyl-galactosaminyltransferase 3","termid":"PBO:0040563"}


id: FYECO:0000108
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which thiazole was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ thiazole","termid":"FYECO:0000108"}


id: PBO:0070425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribulose-5-phosphate-3-epimerase pseudogene 3","termid":"PBO:0070425"}


id: PBO:0068065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 370","termid":"PBO:0068065"}


id: PBO:0017559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSIF transcription elongation factor complex subunit Spt5","termid":"PBO:0017559"}


id: GO:0036134
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: prostaglandin H2 = 12-hydroxyheptadecatrienoic acid (HHT) + malonaldehyde (MDA).","definition_xrefs":["PMID:11297515","GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"12-hydroxyheptadecatrienoic acid synthase activity","secondary_identifiers":["RHEA:48644","Reactome:R-HSA-2161613"],"synonyms":[{"name":"prostaglandin H2 degradation activity","type":"related"}],"termid":"GO:0036134"}


id: PBO:0004508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocon beta subunit Sbh1 (predicted)","termid":"PBO:0004508"}


id: PBO:0035780
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_phosphorylation_during_vegetative_growth","termid":"PBO:0035780"}


id: GO:0071709
data:
  {"annotated_genes":["SJAG_03915","SJAG_04922","SJAG_02529","SJAG_03892","SJAG_00663","SJAG_04489","SJAG_05207","SJAG_04470","SJAG_04275","SJAG_04615","SJAG_02248","SJAG_01050","SJAG_01769","SJAG_03891","SJAG_00971","SJAG_01745","SJAG_03746","SJAG_02320","SJAG_00826","SJAG_02736","SJAG_01467","SJAG_02169","SJAG_04010","SJAG_03536","SJAG_00416","SJAG_00114","SJAG_04781","SJAG_03783","SJAG_03688","SJAG_04080","SJAG_01242","SJAG_02241","SJAG_00900"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100642,120897,103528,101722,115787,99365,120714,111961,109220,93103,120413,107116,99402,97188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032120"},{"annotations":[108394,121336,121337,97779,99770,121338,93156,102709,121335,104967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007084"},{"annotations":[73854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031468"},{"annotations":[92539],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[118793],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903023"},{"annotations":[96318,101939,107843,101654,101653,117830],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"membrane biogenesis","termid":"GO:0044091"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00416":null,"SJAG_00663":null,"SJAG_00826":null,"SJAG_00900":null,"SJAG_00971":null,"SJAG_01050":null,"SJAG_01242":null,"SJAG_01467":null,"SJAG_01745":null,"SJAG_01769":null,"SJAG_02169":null,"SJAG_02241":null,"SJAG_02248":null,"SJAG_02320":null,"SJAG_02529":null,"SJAG_02736":null,"SJAG_03536":null,"SJAG_03688":null,"SJAG_03746":null,"SJAG_03783":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04080":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04489":null,"SJAG_04615":null,"SJAG_04781":null,"SJAG_04922":null,"SJAG_05207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"membrane assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:32243490":null},"termid":"GO:0071709","terms_by_termid":{"GO:0007084":null,"GO:0031468":null,"GO:0032120":null,"GO:0070583":null,"GO:1903023":null,"GO:1903024":null}}


id: GO:0002275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in the morphology or behavior of a myeloid cell resulting from exposure to an activating factor such as a cellular or soluble ligand, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte activation","termid":"GO:0002274"},{"relation_name":"is_a","term_name":"leukocyte activation involved in immune response","termid":"GO:0002366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myeloid cell activation involved in immune response","synonyms":[{"name":"myeloid cell activation during immune response","type":"related"}],"termid":"GO:0002275"}


id: PBO:0063668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-GPI attachment to proteins 6","termid":"PBO:0063668"}


id: MONDO:0011920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the MYO1A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 48","secondary_identifiers":["MESH:C564322","UMLS:C1842939","DOID:0110571","MEDGEN:375052","OMIM:607841","GARD:18120"],"synonyms":[{"name":"DFNA48","type":"narrow"},{"name":"MYO1A autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 48","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 48","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in MYO1A","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 48","type":"narrow"},{"name":"deafness, autosomal dominant 48","type":"narrow"},{"name":"deafness, autosomal dominant type 48","type":"narrow"}],"termid":"MONDO:0011920","xrefs":{"Monarch":{"xref_id":"0011920"}}}


id: _global:interaction_genotype_a
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_relations","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interaction_genotype_a","termid":"_global:interaction_genotype_a"}


id: MOD:01131
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'phos dGuanosyl","termid":"MOD:01131"}


id: PBO:0071185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 26","termid":"PBO:0071185"}


id: PBO:0063855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein interacting with PRKCA 1","termid":"PBO:0063855"}


id: PBO:0080931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta pseudogene 9","termid":"PBO:0080931"}


id: PBO:0051923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITGB5 antisense RNA 1","termid":"PBO:0051923"}


id: GO:0086003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The actin filament-based process in which cytoplasmic actin filaments slide past one another resulting in contraction of a cardiac muscle cell.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin-mediated cell contraction","termid":"GO:0070252"},{"relation_name":"part_of","term_name":"cardiac muscle contraction","termid":"GO:0060048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle cell contraction","termid":"GO:0086003"}


id: MONDO:0859689
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"benign digestive system neoplasm","termid":"MONDO:0000385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"hepatobiliary benign neoplasm","secondary_identifiers":["DOID:3117"],"termid":"MONDO:0859689","xrefs":{"Monarch":{"xref_id":"0859689"}}}


id: PBO:0039287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG2 alpha-1,3/1,6-mannosyltransferase","termid":"PBO:0039287"}


id: PBO:0085821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; expressed during sporulation; not required for sporulation, but gene exhibits genetic interactions with other genes required for sporulation","termid":"PBO:0085821"}


id: PATO:0001357
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A convex 3-D shape quality inhering in a bearer by virtue of the bearer's being shaped like a cushion or has a marked convex cushion-like form.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convex 3-D shape","termid":"PATO:0002007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulvinate","termid":"PATO:0001357"}


id: GO:0102298
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-selenocysteine + O-phosphonato-L-homoserine = hydrogenphosphate + L-selenocystathionine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete selenocystathione synthase activity (obsolete GO:0102298)","termid":"GO:0102298"}


id: PBO:0000810
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycoside mannosyltransferase","termid":"PBO:0000810"}


id: GO:0090172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins that contributes to chromosomal pairing and precedes synapsis.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete microtubule cytoskeleton organization involved in homologous chromosome segregation (obsolete GO:0090172)","synonyms":[{"name":"microtubule cytoskeleton organisation involved in homologous chromosome segregation","type":"exact"},{"name":"microtubule organization involved in chromosome pairing","type":"exact"}],"termid":"GO:0090172"}


id: PBO:0074604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 11E","termid":"PBO:0074604"}


id: GO:0008525
data:
  {"annotated_genes":["SJAG_00669","SJAG_01731","SJAG_02897","SJAG_03746"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96242,99744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140345"},{"annotations":[102017,99745,96243],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090554"},{"annotations":[99369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120019"}]},"cv_name":"molecular_function","definition":"Enables the directed movement of phosphatidylcholine into, out of or within a cell, or between cells. Phosphatidylcholine refers to a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transporter activity","termid":"GO:0005548"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00669":null,"SJAG_01731":null,"SJAG_02897":null,"SJAG_03746":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215"],"is_obsolete":false,"name":"phosphatidylcholine transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"phosphatidylcholine transmembrane transporter activity","type":"narrow"}],"termid":"GO:0008525","terms_by_termid":{"GO:0090554":null,"GO:0120019":null,"GO:0140345":null}}


id: PBO:0078417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon GCC) 1-3","termid":"PBO:0078417"}


id: PBO:0025436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF5B Tif52 (predicted)","termid":"PBO:0025436"}


id: GO:0016714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced pteridine and one other donor, and one atom of oxygen is incorporated into one donor.","definition_xrefs":["EC:1.14.16.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen","termid":"GO:0016714"}


id: PBO:0005703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-NF-X1 zinc finger","termid":"PBO:0005703"}


id: MONDO:0006051
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete postweaning multisystemic wasting syndrome (obsolete MONDO:0006051)","termid":"MONDO:0006051","xrefs":{"Monarch":{"xref_id":"0006051"}}}


id: PBO:0070132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 46 pseudogene","termid":"PBO:0070132"}


id: PBO:0055324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2752","termid":"PBO:0055324"}


id: GO:0034063
data:
  {"annotated_genes":["SJAG_03157","SJAG_02638","SJAG_16457","SJAG_01317","SJAG_02663"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74324,74883,78505,80524,115182],"is_not":false,"summary":null,"term":"GO:0034063"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins and RNA molecules to form a stress granule.","definition_xrefs":["PMID:17392519","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membraneless organelle assembly","termid":"GO:0140694"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01317":null,"SJAG_02638":null,"SJAG_02663":null,"SJAG_03157":null,"SJAG_16457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"stress granule assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"SG assembly","type":"exact"}],"termid":"GO:0034063","terms_by_termid":{"GO:0034063":null}}


id: GO:0055111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of individual cells into the embryo involved in deuterostomic gastrulation.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in gastrulation","termid":"GO:0042074"},{"relation_name":"part_of","term_name":"gastrulation with mouth forming second","termid":"GO:0001702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ingression involved in gastrulation with mouth forming second","termid":"GO:0055111"}


id: GO:0051161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving arabitol, the pentitol derived from arabinose or lyxose by reduction of the aldehyde group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentitol metabolic process","termid":"GO:0019519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"arabitol metabolic process","synonyms":[{"name":"arabitol metabolism","type":"exact"}],"termid":"GO:0051161"}


id: PBO:0089925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartyl metalloaminopeptidase Ape4","termid":"PBO:0089925"}


id: MONDO:0018944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A diverse group of pregnancy-related tumors characterized by excessive proliferation of trophoblasts. Representative examples include hydatidiform mole, gestational choriocarcinoma, and placental site trophoblastic tumor.","definition_xrefs":["NCIT:C4699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trophoblastic neoplasm","termid":"MONDO:0002872"},{"relation_name":"is_a","term_name":"female reproductive system neoplasm","termid":"MONDO:0021148"},{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gestational trophoblastic neoplasm","secondary_identifiers":["MedDRA:10061988","MEDGEN:210107","SCTID:44782008","Orphanet:59305","MESH:D006828","ICD9:630","SCTID:609519004","DOID:3590","GARD:6498","icd11.foundation:1972855304","NCIT:C3110","UMLS:C1135868"],"synonyms":[{"name":"GTN","type":"exact"},{"name":"GTT","type":"exact"},{"name":"gestational trophoblastic disease","type":"broad"},{"name":"gestational trophoblastic neoplasia","type":"exact"},{"name":"gestational trophoblastic tumor","type":"exact"},{"name":"gestational trophoblastic tumour","type":"exact"},{"name":"hydatidiform mole","type":"related"},{"name":"molar pregnancy","type":"related"}],"termid":"MONDO:0018944","xrefs":{"Monarch":{"xref_id":"0018944"}}}


id: MONDO:0015870
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of breast cancer that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare malignant breast tumor (obsolete MONDO:0015870)","secondary_identifiers":["Orphanet:180257"],"synonyms":[{"name":"rare breast cancer","type":"exact"}],"termid":"MONDO:0015870","xrefs":{"Monarch":{"xref_id":"0015870"}}}


id: FYPO:0007695
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the activity of a DNA strand exchange inhibitor is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:33493431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal molecular function","termid":"FYPO:0000706"},{"relation_name":"is_a","term_name":"catalytic activity regulator phenotype","termid":"FYPO:0007690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal DNA strand exchange inhibitor activity","synonyms":[{"name":"normal RecA-family recombinase inhibitor activity","type":"exact"},{"name":"normal negative regulation of RecA-family recombinase activity","type":"related"}],"termid":"FYPO:0007695"}


id: PBO:0054711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2120","termid":"PBO:0054711"}


id: _global:causally_upstream_of_or_within
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p is 'causally upstream or within' q iff p is causally related to q, and the end of p precedes, or is coincident with, the end of q.","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_relation_between_processes","termid":"_global:causal_relation_between_processes"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_upstream_of_or_within","secondary_identifiers":["RO:0002418"],"synonyms":[{"name":"affects","type":"related"}],"termid":"_global:causally_upstream_of_or_within"}


id: PR:O14142
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3G6.05 gene.","definition_xrefs":["UniProtKB:O14142","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sym1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G6.05","synonyms":[{"name":"Spom972h-SPAC3G6.05","type":"exact"}],"termid":"PR:O14142"}


id: PBO:0066441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulophagy regulator family member 2","termid":"PBO:0066441"}


id: MONDO:0018779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypercontractile muscle stiffness syndrome (obsolete MONDO:0018779)","secondary_identifiers":["Orphanet:476403"],"termid":"MONDO:0018779","xrefs":{"Monarch":{"xref_id":"0018779"}}}


id: MONDO:0032943
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with relative macrocephaly and with or without cardiac or endocrine anomalies","secondary_identifiers":["MEDGEN:1714169","OMIM:618829","Orphanet:662175","UMLS:C5394221"],"synonyms":[{"name":"NEDMACE","type":"related"},{"name":"NEURODEVELOPMENTAL DISORDER WITH RELATIVE MACROCEPHALY AND WITH OR WITHOUT CARDIAC OR ENDOCRINE ANOMALIES","type":"related"},{"name":"nabais sa-de vries syndrome, type 2","type":"exact"}],"termid":"MONDO:0032943","xrefs":{"Monarch":{"xref_id":"0032943"}}}


id: PBO:0027412
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_m7G(5')pppN_diphosphatase_activity","termid":"PBO:0027412"}


id: PBO:0069595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 871, pseudogene","termid":"PBO:0069595"}


id: FYPO:0004049
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione peroxidase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal glutathione peroxidase activity","termid":"FYPO:0004048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000002","FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0005447"],"is_obsolete":false,"name":"increased glutathione peroxidase activity","termid":"FYPO:0004049"}


id: PBO:0029941
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cone-shaped_colony_morphology","termid":"PBO:0029941"}


id: PBO:0065812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB3 GTPase activating non-catalytic protein subunit 2","termid":"PBO:0065812"}


id: PBO:0054241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1623","termid":"PBO:0054241"}


id: PBO:0076364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trace amine associated receptor 1","termid":"PBO:0076364"}


id: FYPO:0006583
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nuclear periphery is decreased during interphase of the mitotic cell cycle. The nuclear periphery is the portion of the nuclear lumen proximal to the inner nuclear membrane.","definition_xrefs":["PomBase:mah","GO:0034399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nuclear periphery","termid":"FYPO:0002339"},{"relation_name":"is_a","term_name":"decreased protein localization to nucleus during mitotic interphase","termid":"FYPO:0006642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to nuclear periphery during mitotic interphase","synonyms":[{"name":"decreased protein localisation to nuclear periphery during mitotic interphase","type":"exact"},{"name":"decreased protein localization to nuclear periphery during interphase during vegetative growth","type":"exact"},{"name":"decreased protein localization to nuclear periphery during interphase of mitotic cell cycle","type":"exact"},{"name":"reduced protein localization to nuclear periphery during mitotic interphase","type":"exact"}],"termid":"FYPO:0006583"}


id: PBO:0048614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase, IMAP family member 6","termid":"PBO:0048614"}


id: GO:0001621
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with ADP and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:mah","PMID:11196645","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled purinergic nucleotide receptor activity","termid":"GO:0045028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled ADP receptor activity","secondary_identifiers":["GO:0045032"],"synonyms":[{"name":"ADP receptor activity","type":"broad"},{"name":"ADP-activated adenosine receptor activity","type":"related"},{"name":"ADP-activated nucleotide receptor activity","type":"broad"},{"name":"K101 receptor","type":"narrow"},{"name":"platelet ADP receptor activity","type":"narrow"}],"termid":"GO:0001621"}


id: MONDO:0012317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic intestinal pseudoobstruction","termid":"MONDO:0017574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"visceral neuropathy, familial, 3, autosomal dominant","secondary_identifiers":["DOID:0080682","UMLS:C1864996","OMIM:609629","MEDGEN:351272"],"synonyms":[{"name":"enteric neuropathy, familial","type":"related"},{"name":"pseudoobstruction, chronic intestinal, neuropathic","type":"related"},{"name":"pseudoobstruction, idiopathic intestinal","type":"related"},{"name":"visceral neuropathy, familial, autosomal dominant","type":"exact"}],"termid":"MONDO:0012317","xrefs":{"Monarch":{"xref_id":"0012317"}}}


id: PBO:0077811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p53 binding protein 2","termid":"PBO:0077811"}


id: PATO:0002028
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An osmolality which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"osmolality","termid":"PATO:0002027"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased osmolality","synonyms":[{"name":"low osmolality","type":"exact"}],"termid":"PATO:0002028"}


id: GO:0140812
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: orotate(out) + anion (in) = orotate (in) + anion (out).","definition_xrefs":["PMID:21350910","PMID:35144162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion transmembrane transporter activity","termid":"GO:0008509"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"secondary active monocarboxylate transmembrane transporter activity","termid":"GO:0015355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"orotate:monoatomic anion antiporter activity","synonyms":[{"name":"orotate:anion antiporter activity","type":"broad"},{"name":"orotate:organic anion antiporter activity","type":"narrow"}],"termid":"GO:0140812"}


id: FYPO:0000291
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects translation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression phenotype","termid":"FYPO:0000142"},{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"translation phenotype","synonyms":[{"name":"fission yeast translation phenotype","type":"exact"},{"name":"translation phenotype during mitotic cell cycle","type":"related"},{"name":"translation phenotype during vegetative growth","type":"exact"}],"termid":"FYPO:0000291"}


id: GO:1902262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that is involved in blood vessel morphogenesis.","definition_xrefs":["PMID:16163358","GOC:TermGenie","GOC:dph","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in morphogenesis","termid":"GO:0060561"},{"relation_name":"part_of","term_name":"blood vessel morphogenesis","termid":"GO:0048514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in blood vessel morphogenesis","synonyms":[{"name":"apoptosis involved in patterning of blood vessels","type":"narrow"},{"name":"apoptotic cell death involved in patterning of blood vessels","type":"exact"},{"name":"apoptotic program involved in patterning of blood vessels","type":"narrow"},{"name":"apoptotic programmed cell death involved in patterning of blood vessels","type":"exact"},{"name":"programmed cell death by apoptosis involved in patterning of blood vessels","type":"exact"},{"name":"signaling (initiator) caspase activity involved in patterning of blood vessels","type":"related"},{"name":"type I programmed cell death involved in patterning of blood vessels","type":"narrow"}],"termid":"GO:1902262"}


id: PBO:0077797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"torsin family 1 member B","termid":"PBO:0077797"}


id: PATO:0000016
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A scalar optical property that is the intensity, value or amount of perceived light.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"optical quality","termid":"PATO:0001300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"color brightness","synonyms":[{"name":"color intensity ","type":"exact"},{"name":"color lightness ","type":"exact"},{"name":"color value ","type":"exact"}],"termid":"PATO:0000016"}


id: PBO:0089896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans-aconitate 3-methyltransferase","termid":"PBO:0089896"}


id: MONDO:0013954
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive mendelian susceptibility to mycobacterial diseases due to a complete deficiency in which the cause of the disease is a mutation in the IL12B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited susceptibility to mycobacterial diseases","termid":"MONDO:0019146"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mendelian susceptibility to mycobacterial diseases due to complete IL12B deficiency","secondary_identifiers":["Orphanet:319558","UMLS:C4013948","MEDGEN:862385","OMIM:614890","DOID:0111950"],"synonyms":[{"name":"IL12B autosomal recessive mendelian susceptibility to mycobacterial diseases due to a complete deficiency","type":"exact"},{"name":"IL12B deficiency","type":"related"},{"name":"IMD29","type":"related"},{"name":"MSMD due to complete IL12B deficiency","type":"exact"},{"name":"MSMD due to complete interleukin 12B deficiency","type":"exact"},{"name":"Mendelian susceptibility to mycobacterial diseases due to complete interleukin 12B deficiency","type":"exact"},{"name":"autosomal recessive mendelian susceptibility to mycobacterial diseases due to a complete deficiency caused by mutation in IL12B","type":"exact"},{"name":"immunodeficiency 29","type":"related"},{"name":"immunodeficiency 29, mycobacteriosis","type":"exact"},{"name":"immunodeficiency type 29","type":"exact"}],"termid":"MONDO:0013954","xrefs":{"Monarch":{"xref_id":"0013954"}}}


id: FYPO:0006450
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the substrate specificity of a gene product that executes histone H3 acetyltransferase activity is altered. For example, preference for modified (e.g. methylated) H3 molecules may be enhanced or diminished.","definition_xrefs":["PomBase:mah","PMID:26401015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered substrate specificity","termid":"FYPO:0003347"},{"relation_name":"is_a","term_name":"abnormal histone acetyltransferase activity","termid":"FYPO:0006453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000641","FYPO:0000652","FYPO:0000661","FYPO:0000002"],"is_obsolete":false,"name":"altered histone H3 acetyltransferase substrate specificity","synonyms":[{"name":"altered H3 histone acetyltransferase substrate specificity","type":"exact"}],"termid":"FYPO:0006450"}


id: PBO:0046062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF3J pseudogene 1","termid":"PBO:0046062"}


id: PBO:0079491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TXNDC11 antisense RNA 1","termid":"PBO:0079491"}


id: PR:O74492
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 5-hydroxyisourate hydrolase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04832","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxyisourate hydrolase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC285.04","secondary_identifiers":["UniProtKB:O74492"],"synonyms":[{"name":"HIU hydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"HIUHase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-Urah","type":"exact"},{"name":"transthyretin-like protein C285.04 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74492"}


id: PBO:0072590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA processing 36","termid":"PBO:0072590"}


id: GO:0035332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hippo signaling.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hippo signaling","termid":"GO:0035330"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"hippo signaling","termid":"GO:0035329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of hippo signaling","synonyms":[{"name":"positive regulation of hippo signaling cascade","type":"related"},{"name":"positive regulation of hippo signaling pathway","type":"exact"},{"name":"positive regulation of hippo signalling cascade","type":"related"}],"termid":"GO:0035332"}


id: GO:0006568
data:
  {"annotated_genes":["SJAG_05007","SJAG_01455","SJAG_03167","SJAG_02505"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78978,75194,70061,75920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000162"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indolalkylamine metabolic process","termid":"GO:0006586"},{"relation_name":"is_a","term_name":"aromatic amino acid metabolic process","termid":"GO:0009072"},{"relation_name":"is_a","term_name":"erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process","termid":"GO:1902221"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01455":null,"SJAG_02505":null,"SJAG_03167":null,"SJAG_05007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-tryptophan metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null},"secondary_identifiers":["Wikipedia:Tryptophan"],"synonyms":[{"name":"tryptophan metabolic process","type":"related"},{"name":"tryptophan metabolism","type":"related"}],"termid":"GO:0006568","terms_by_termid":{"GO:0000162":null}}


id: GO:0008926
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannitol 1-phosphate + NAD+ = D-fructose 6-phosphate + NADH + H+.","definition_xrefs":["EC:1.1.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"mannitol-1-phosphate 5-dehydrogenase activity","secondary_identifiers":["RHEA:19661","MetaCyc:MANNPDEHYDROG-RXN"],"termid":"GO:0008926"}


id: FYPO:0007490
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a mannosyltransferase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000257"],"is_obsolete":false,"name":"normal mannosyltransferase activity","termid":"FYPO:0007490"}


id: PBO:0055594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3030","termid":"PBO:0055594"}


id: MONDO:0012840
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inflammatory bowel disease in which the cause of the disease is a mutation in the IL23R gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"inflammatory bowel disease 17","secondary_identifiers":["OMIM:612261","UMLS:C2677091","MEDGEN:436857","DOID:0110883","MESH:C567378"],"synonyms":[{"name":"IBD17","type":"exact"},{"name":"IL23R inflammatory bowel disease","type":"exact"},{"name":"inflammatory bowel disease 17","type":"exact"},{"name":"inflammatory bowel disease 17, protection against","type":"exact"},{"name":"inflammatory bowel disease caused by mutation in IL23R","type":"exact"},{"name":"inflammatory bowel disease type 17","type":"exact"}],"termid":"MONDO:0012840","xrefs":{"Monarch":{"xref_id":"0012840"}}}


id: PBO:0052376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 20A","termid":"PBO:0052376"}


id: MONDO:0009263
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A multiple congenital anomalies (MCA) syndrome involving connective tissue characterized by growth retardation, alopecia, pseudoanodontia and ocular manifestations","definition_xrefs":["Orphanet:2067"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"GAPO syndrome","secondary_identifiers":["DOID:0112249","icd11.foundation:909165198","OMIM:230740","GARD:400","MESH:C535642","SCTID:721843003","MEDGEN:98034","UMLS:C0406723"],"synonyms":[{"name":"Growth delay-alopecia-pseudoanodontia-optic atrophy syndrome","type":"exact"},{"name":"Growth retardation, alopecia, pseudoanodontia and optic atrophy","type":"related"},{"name":"Growth retardation, alopecia, pseudoanodontia, and optic atrophy","type":"related"},{"name":"gapo syndrome","type":"exact"}],"termid":"MONDO:0009263","xrefs":{"Monarch":{"xref_id":"0009263"}}}


id: MONDO:0002394
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Leydig cell tumor (obsolete MONDO:0002394)","termid":"MONDO:0002394","xrefs":{"Monarch":{"xref_id":"0002394"}}}


id: FYECO:0000129
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition where the pH of the medium or assay buffer is higher than the standard pombe growth medium of pH of ~5.6.","definition_xrefs":["PMID:10467002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high pH","secondary_identifiers":["FYECO:0000130"],"synonyms":[{"name":"pH 6.8","type":"narrow"}],"termid":"FYECO:0000129"}


id: PBO:0054876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2290","termid":"PBO:0054876"}


id: GO:0016454
data:
  {"annotated_genes":["SJAG_04178","SJAG_02305"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80660,78596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004758"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a palmitoyl group to a carbon atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-acyltransferase activity","termid":"GO:0016408"},{"relation_name":"is_a","term_name":"palmitoyltransferase activity","termid":"GO:0016409"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02305":null,"SJAG_04178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"C-palmitoyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0016454","terms_by_termid":{"GO:0004758":null}}


id: PBO:0075923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 15","termid":"PBO:0075923"}


id: PATO:0000553
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000553 relative temperature sensitivity value (obsolete PATO:0000553)","termid":"PATO:0000553"}


id: GO:2000212
data:
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id: MONDO:0958023
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id: GO:0034366
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id: GO:0010826
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id: PBO:0089960
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shelterin complex telomere binding subunit Rap1","termid":"PBO:0089960"}


id: GO:0046977
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id: GO:0160222
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id: PBO:0070965
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id: PBO:0028307
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id: PBO:0089958
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id: MONDO:0004335
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id: GO:1901560
data:
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id: MONDO:0002987
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id: PBO:0031169
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id: PBO:0056748
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id: GO:0003283
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id: PBO:0004088
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id: GO:1905749
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id: PBO:0087455
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id: PR:Q9UTG2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pub2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTG2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase pub2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.15c","synonyms":[{"name":"Spom972h-pub2","type":"exact"}],"termid":"PR:Q9UTG2"}


id: PBO:0029022
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_phytochelatin_level","termid":"PBO:0029022"}


id: MONDO:0013422
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any classic complement early component deficiency in which the cause of the disease is a mutation in the C8A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic complement early component deficiency","termid":"MONDO:0000015"},{"relation_name":"is_a","term_name":"immunodeficiency due to a late component of complement deficiency","termid":"MONDO:0015700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"type I complement component 8 deficiency","secondary_identifiers":["DOID:0060301","GARD:10626","MEDGEN:462431","OMIM:613790","UMLS:C3151081","HGNC:1352"],"synonyms":[{"name":"C8 Alpha-gamma deficiency","type":"related"},{"name":"C8 deficiency type I","type":"related"},{"name":"C8 deficiency, type 1","type":"related"},{"name":"C8 deficiency, type I","type":"exact"},{"name":"C81 deficiency","type":"related"},{"name":"C8A classic complement early component deficiency","type":"exact"},{"name":"C8Ag deficiency","type":"related"},{"name":"C8D1","type":"related"},{"name":"classic complement early component deficiency caused by mutation in C8A","type":"exact"},{"name":"complement component 8 deficiency type 1","type":"related"},{"name":"complement component 8 deficiency type I","type":"related"},{"name":"complement component 8 deficiency, type 1","type":"related"},{"name":"complement component 8 deficiency, type I","type":"related"}],"termid":"MONDO:0013422","xrefs":{"Monarch":{"xref_id":"0013422"}}}


id: PBO:0088306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA/mRNA dihydrouridine synthase Dus1","termid":"PBO:0088306"}


id: PBO:0050986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 70A","termid":"PBO:0050986"}


id: PBO:0086385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative boron transporter involved in boron efflux and resistance; overexpression mutant but not null mutant displays boron tolerance phenotype; identified as a heat-induced gene in a high-throughout screen; YMR279C is not an essential gene; YMR279C has a paralog, ATR1, that arose from the whole genome duplication","termid":"PBO:0086385"}


id: PR:Q9USS0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pyrazinamidase/nicotinamidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.20c","secondary_identifiers":["UniProtKB:Q9USS0"],"synonyms":[{"name":"NAMase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pncA","type":"exact"},{"name":"nicotine deamidase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USS0"}


id: PBO:0034187
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_orthology_relationship_with","termid":"PBO:0034187"}


id: GO:0033642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates a change in state or activity of a host cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gravitational stimulus. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host response to gravitational stimulus (obsolete GO:0033642)","synonyms":[{"name":"response to gravitational stimulus","type":"broad"}],"termid":"GO:0033642"}


id: PBO:0075765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/arginine repetitive matrix 4","termid":"PBO:0075765"}


id: PR:O94483
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dad5 gene.","definition_xrefs":["UniProtKB:O94483","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high osmolarity sensitivity protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC417.02","synonyms":[{"name":"Spom972h-dad5","type":"exact"}],"termid":"PR:O94483"}


id: GO:0099518
data:
  {"annotated_genes":["SJAG_02651","SJAG_00594","SJAG_03011"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030050"},{"annotations":[106370,106703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047496"}]},"cv_name":"biological_process","definition":"The directed movement of a vesicle along a cytoskeletal fiber such as a microtubule or and actin filament, mediated by motor proteins.","definition_xrefs":["GOC:ecd","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton-dependent intracellular transport","termid":"GO:0030705"},{"relation_name":"is_a","term_name":"establishment of vesicle localization","termid":"GO:0051650"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00594":null,"SJAG_02651":null,"SJAG_03011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"vesicle cytoskeletal trafficking","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytoskeletal fiber-based vesicle localization","type":"exact"},{"name":"vesicle cytoskeletal transport","type":"exact"}],"termid":"GO:0099518","terms_by_termid":{"GO:0030050":null,"GO:0047496":null}}


id: SO:0002122
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A germline immunoglobulin gene.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene","termid":"SO:0002121"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin_gene","synonyms":[{"name":"All_IG_genes","type":"exact"},{"name":"IG_genes","type":"exact"}],"termid":"SO:0002122"}


id: PBO:0001893
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ammecr1","termid":"PBO:0001893"}


id: GO:0018410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The alteration of the C-terminal amino acid residue in a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-translational protein modification","termid":"GO:0043687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"C-terminal protein amino acid modification","synonyms":[{"name":"peptide or protein carboxyl-terminal blocking","type":"related"},{"name":"peptide/protein carboxyl-terminal blocking","type":"related"}],"termid":"GO:0018410"}


id: PBO:0058594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6726","termid":"PBO:0058594"}


id: MONDO:0023013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Duker-Weiss-Siber syndrome","secondary_identifiers":["MEDGEN:419689","MESH:C535719","UMLS:C2930993"],"synonyms":[{"name":"Duker Weiss Siber syndrome","type":"related"},{"name":"microphthalmos, microencephaly, intellectual disability, agenesis of the corpus callosum, hypospadius, and cryptorchidism","type":"related"},{"name":"microphthalmos, microencephaly, mental retardation, agenesis of the corpus callosum, hypospadius, and cryptorchidism","type":"related"}],"termid":"MONDO:0023013","xrefs":{"Monarch":{"xref_id":"0023013"}}}


id: GO:0075155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont transmembrane receptor-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transmembrane receptor-mediated signal transduction in response to host (obsolete GO:0075155)","synonyms":[{"name":"negative regulation of symbiont transmembrane receptor-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075155"}


id: MONDO:0019156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Angioosteohypotrophic syndrome is a rare, congenital, vascular anomaly syndrome characterized by venous or, on occasion, arterial malformations which lead to soft tissue hypertrophy and bone hypoplasia. Affected limb is generally shortened, highly deformed, painful and edematous and associates bone and muscle hypotrophy. Single parts, or multiple small parts, of limbs are typically affected but more extensive involvement, including complete extremity, shoulder girdle and axilla, has been reported.","definition_xrefs":["Orphanet:75508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"bone development disease","termid":"MONDO:0005497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"angioosteohypotrophic syndrome","secondary_identifiers":["MEDGEN:1641209","GARD:18927","SCTID:765750001","UMLS:C4707561"],"synonyms":[{"name":"Phlebectatic osteohypoplastic angiodysplasia","type":"exact"},{"name":"Servelle-Martorell syndrome","type":"exact"}],"termid":"MONDO:0019156","xrefs":{"Monarch":{"xref_id":"0019156"}}}


id: PR:P50515
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A V-type proton ATPase 16 kDa proteolipid subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02061","PANTHER:PTHR10263:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase 16 kDa proteolipid subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.14","secondary_identifiers":["UniProtKB:P50515"],"synonyms":[{"name":"Spom972h-ATP6V0C","type":"exact"},{"name":"V-ATPase 16 kDa proteolipid subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump 16 kDa proteolipid subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P50515"}


id: GO:0071605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of monocyte chemotactic protein-1 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add","GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"monocyte chemotactic protein-1 production","synonyms":[{"name":"CCL2 production","type":"exact"},{"name":"MCP-1 production","type":"exact"}],"termid":"GO:0071605"}


id: PBO:0082709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the MICOS complex; MICOS (formerly MINOS or MitOS) is a mitochondrial inner membrane complex that extends into the intermembrane space and has a role in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane; Mic60p is also involved in import of intermembrane space (IMS) proteins, probably by positioning Mia40p relative to the TOM complex to receive incoming proteins; ortholog of mammalian mitofilin","termid":"PBO:0082709"}


id: PBO:0075358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sosondowah ankyrin repeat domain family member D","termid":"PBO:0075358"}


id: PBO:0073701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SKAP1 antisense RNA 2","termid":"PBO:0073701"}


id: PBO:0049760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"host cell factor C2","termid":"PBO:0049760"}


id: PR:O74920
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vph2 gene.","definition_xrefs":["UniProtKB:O74920","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar ATPase assembly integral membrane protein vph2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.10","synonyms":[{"name":"Spom972h-vph2","type":"exact"}],"termid":"PR:O74920"}


id: GO:0047359
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-alkenyl-2-acylglycerol + CDP-choline = plasmenylcholine + CMP.","definition_xrefs":["EC:2.7.8.22","MetaCyc:2.7.8.22-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016780","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"1-alkenyl-2-acylglycerol choline phosphotransferase activity","secondary_identifiers":["RHEA:36227"],"synonyms":[{"name":"CDP-choline-1-alkenyl-2-acyl-glycerol phosphocholinetransferase activity","type":"related"},{"name":"CDP-choline:1-alkenyl-2-acylglycerol cholinephosphotransferase activity","type":"related"}],"termid":"GO:0047359"}


id: GO:0002295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a CD4-positive, alpha-beta T cell becomes committed to becoming a T-helper cell, a CD4-positive, alpha-beta T cell specialized to promote various immunological processes.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell lineage commitment","termid":"GO:0043373"},{"relation_name":"part_of","term_name":"T-helper cell differentiation","termid":"GO:0042093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper cell lineage commitment","synonyms":[{"name":"T-helper cell fate commitment","type":"exact"},{"name":"Th0 lineage commitment","type":"related"},{"name":"Thp lineage commitment","type":"related"}],"termid":"GO:0002295"}


id: GO:0036102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving leukotriene B4, a leukotriene composed of (6Z,8E,10E,14Z)-eicosatetraenoic acid having (5S)- and (12R)-hydroxy substituents.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"},{"relation_name":"is_a","term_name":"leukotriene metabolic process","termid":"GO:0006691"},{"relation_name":"is_a","term_name":"fatty acid derivative metabolic process","termid":"GO:1901568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"leukotriene B4 metabolic process","synonyms":[{"name":"LTB4 metabolism","type":"exact"}],"termid":"GO:0036102"}


id: FYPO:0003278
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the position, morphology, or physical characteristics of all or part of the plasma membrane is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"output_of","term_name":"abnormal plasma membrane organization","termid":"FYPO:0000813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal plasma membrane during vegetative growth","synonyms":[{"name":"abnormal plasma membrane during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003278"}


id: MONDO:0003916
data:
  {"annotated_genes":["SJAG_04980","SJAG_04398"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014352"},{"annotations":[86988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010961"}]},"cv_name":"mondo","definition":"An imbalanced nutritional status resulting from excessive intake of nutrients. Generally, overnutrition generates an energy imbalance between food consumption and energy expenditure leading to disorders such as obesity.","definition_xrefs":["MESH:D044343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nutritional disorder","termid":"MONDO:0005137"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04398":null,"SJAG_04980":null},"genotype_count":0,"is_obsolete":false,"name":"overnutrition","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:278.8","UMLS:C1257763","MEDGEN:219760","DOID:654","SCTID:302872003"],"termid":"MONDO:0003916","terms_by_termid":{"MONDO:0010961":null,"MONDO:0014352":null},"xrefs":{"Monarch":{"xref_id":"0003916"}}}


id: PBO:0063556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plaque enriched lncRNA in atherosclerotic and inflammatory bowel macrophage regulation","termid":"PBO:0063556"}


id: PBO:0084640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Microsomal beta-keto-reductase; contains oleate response element (ORE) sequence in the promoter region; mutants exhibit reduced VLCFA synthesis, accumulate high levels of dihydrosphingosine, phytosphingosine and medium-chain ceramides","termid":"PBO:0084640"}


id: GO:0051602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electrical stimulus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to electrical stimulus","synonyms":[{"name":"response to electricity","type":"related"}],"termid":"GO:0051602"}


id: PBO:0088863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Mgr2","termid":"PBO:0088863"}


id: PBO:0060906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurogenin 1","termid":"PBO:0060906"}


id: PBO:0088014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type II phosphatidylinositol 4-kinase; binds Las17p, a homolog of human Wiskott-Aldrich Syndrome protein involved in actin patch assembly and actin polymerization","termid":"PBO:0088014"}


id: MONDO:0850230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An urticaria that is characterized by the presence of urticaria for a period exceeding 6 weeks, assuming symptoms for most days of the week.","definition_xrefs":["DOID:0080747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urticaria","termid":"MONDO:0005492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"chronic urticaria","secondary_identifiers":["icd11.foundation:901000137","UMLS:C0263338","MEDGEN:537829"],"termid":"MONDO:0850230","xrefs":{"Monarch":{"xref_id":"0850230"}}}


id: MONDO:0011318
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tonoki syndrome","secondary_identifiers":["MESH:C536967","UMLS:C1863918","MEDGEN:355094","OMIM:603396"],"synonyms":[{"name":"Tonoki syndrome","type":"exact"},{"name":"short stature, brachydactyly, nail dysplasia and intellectual disability","type":"related"},{"name":"short stature, brachydactyly, nail dysplasia and mental retardation","type":"related"}],"termid":"MONDO:0011318","xrefs":{"Monarch":{"xref_id":"0011318"}}}


id: FYPO:0005137
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which generation of double-strand breaks at defined hotspots throughout the genome during meiosis I begins later than normal.","definition_xrefs":["GO:0042138","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic DNA double-strand break formation","termid":"FYPO:0003564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000293","FYPO:0000631","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"delayed onset of meiotic DNA double-strand break formation","synonyms":[{"name":"delayed meiotic DNA double-strand break formation","type":"exact"}],"termid":"FYPO:0005137"}


id: PBO:0051613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 36 gamma","termid":"PBO:0051613"}


id: FYPO:0004383
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle begins earlier than normal.","definition_xrefs":["PMID:20935472","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle","termid":"FYPO:0002824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"premature protein localization to mitotic spindle","synonyms":[{"name":"advanced protein localization to mitotic spindle","type":"exact"},{"name":"precocious protein localization to mitotic spindle","type":"related"},{"name":"premature protein localisation to mitotic spindle","type":"exact"},{"name":"premature protein localization to mitotic spindle during mitotic cell cycle","type":"related"},{"name":"premature protein localization to spindle during mitosis","type":"exact"},{"name":"premature protein localization to spindle during vegetative growth","type":"exact"}],"termid":"FYPO:0004383"}


id: PBO:0062676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 14 subfamily I member 1","termid":"PBO:0062676"}


id: GO:2000852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of corticosterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucocorticoid secretion","termid":"GO:2000849"},{"relation_name":"regulates","term_name":"corticosterone secretion","termid":"GO:0035934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of corticosterone secretion","termid":"GO:2000852"}


id: GO:0031765
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2 galanin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galanin receptor binding","termid":"GO:0031763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"type 2 galanin receptor binding","synonyms":[{"name":"type 2 galanin receptor ligand","type":"narrow"}],"termid":"GO:0031765"}


id: PBO:0045335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DOCK9 antisense RNA 1","termid":"PBO:0045335"}


id: GO:0051096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of a helicase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ATP-dependent activity","termid":"GO:0032781"},{"relation_name":"is_a","term_name":"positive regulation of catalytic activity","termid":"GO:0043085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of helicase activity","synonyms":[{"name":"activation of helicase activity","type":"narrow"},{"name":"stimulation of helicase activity","type":"narrow"},{"name":"up regulation of helicase activity","type":"exact"},{"name":"up-regulation of helicase activity","type":"exact"},{"name":"upregulation of helicase activity","type":"exact"}],"termid":"GO:0051096"}


id: PBO:0072414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 19","termid":"PBO:0072414"}


id: PBO:0042457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 45","termid":"PBO:0042457"}


id: MONDO:0016170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Chronic form of polyradiculoneuropathy.","definition_xrefs":["MONDO:patterns/chronic"],"gene_count":0,"genotype_count":0,"name":"obsolete chronic polyradiculoneuropathy (obsolete MONDO:0016170)","secondary_identifiers":["Orphanet:208978"],"synonyms":[{"name":"polyradiculoneuropathy, chronic","type":"exact"}],"termid":"MONDO:0016170","xrefs":{"Monarch":{"xref_id":"0016170"}}}


id: PBO:0061104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurolysin","termid":"PBO:0061104"}


id: MONDO:0002844
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"gastritis","termid":"MONDO:0004966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"lymphocytic gastritis","secondary_identifiers":["MEDGEN:266188","icd11.foundation:2052188597","SCTID:360375007","DOID:4035","NCIT:C27051","UMLS:C1283271","ICD9:535.40"],"synonyms":[{"name":"lymphocytic gastritis","type":"exact"}],"termid":"MONDO:0002844","xrefs":{"Monarch":{"xref_id":"0002844"}}}


id: FYPO:0008335
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the addition of one or more uridylyl residues to the poly(A) tails of mRNA molecules occurs to a higher extent than normal.","definition_xrefs":["PMID:39333464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA modification","termid":"FYPO:0000374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased mRNA poly(A) tail uridylation","termid":"FYPO:0008335"}


id: PR:Q9USM8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg20 gene.","definition_xrefs":["UniProtKB:Q9USM8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy-related protein 20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.08","synonyms":[{"name":"Spom972h-atg20","type":"exact"}],"termid":"PR:Q9USM8"}


id: GO:0015753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which D-xylose is transported across a lipid bilayer, from one side of a membrane to the other. D-xylose (the naturally occurring enantiomer is always D-) is a constituent of plant polysaccharides.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose transmembrane transport","termid":"GO:0015750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"D-xylose transmembrane transport","synonyms":[{"name":"D-xylose transport","type":"related"}],"termid":"GO:0015753"}


id: PBO:0048011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing 8 pseudogene 1","termid":"PBO:0048011"}


id: PBO:0086381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ATP-dependent RNA helicase; nucleolar protein required for synthesis of 60S ribosomal subunits at a late step in the pathway; sediments with 66S pre-ribosomes in sucrose gradients","termid":"PBO:0086381"}


id: PBO:0059939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 25","termid":"PBO:0059939"}


id: MONDO:0014364
data:
  {"annotated_genes":["SJAG_03099"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88213],"is_not":false,"summary":null,"term":"MONDO:0014364"}]},"cv_name":"mondo","definition":"Any mitochondrial complex III deficiency in which the cause of the disease is a mutation in the LYRM7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex III deficiency, nuclear type","termid":"MONDO:0020811"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03099":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex III deficiency nuclear type 8","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080117","MEDGEN:862877","GARD:16018","UMLS:C4014440","OMIM:615838"],"synonyms":[{"name":"LYRM7 mitochondrial complex III deficiency","type":"exact"},{"name":"MC3DN8","type":"related"},{"name":"mitochondrial Complex 3 deficiency, nuclear type 8","type":"related"},{"name":"mitochondrial complex III deficiency caused by mutation in LYRM7","type":"exact"},{"name":"mitochondrial complex III deficiency nuclear type 8","type":"exact"},{"name":"mitochondrial complex III deficiency, nuclear type 8","type":"related"}],"termid":"MONDO:0014364","terms_by_termid":{"MONDO:0014364":null},"xrefs":{"Monarch":{"xref_id":"0014364"}}}


id: GO:0180063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A glycoprotein biosynthetic process starting with the covalent linkage of an arabinose via a beta-glycosidic bond to the oxygen atom of the hydroxyl group of a hydroxyproline in a protein, which can be further elongated with the sequential addition of sugar units resulting in the formation of a protein O-linked glycan.","definition_xrefs":["PMID:33815452","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein O-linked glycosylation","termid":"GO:0006493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein O-linked arbinosylation","termid":"GO:0180063"}


id: PBO:0072422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 27","termid":"PBO:0072422"}


id: PBO:0067915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 217","termid":"PBO:0067915"}


id: PBO:0030720
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_polysaccharide_level","termid":"PBO:0030720"}


id: MONDO:0004282
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete eccrine porocarcinoma (obsolete MONDO:0004282)","termid":"MONDO:0004282","xrefs":{"Monarch":{"xref_id":"0004282"}}}


id: GO:0018580
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ethylnitronate + O2 = acetaldehyde + nitrite.","definition_xrefs":["EC:1.13.12.16","RHEA:28767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"nitronate monooxygenase activity","secondary_identifiers":["MetaCyc:2-NITROPROPANE-DIOXYGENASE-RXN"],"synonyms":[{"name":"2-nitropropane dioxygenase activity","type":"related"},{"name":"nitronate:oxygen 2-oxidoreductase (nitrite-forming) activity","type":"exact"}],"termid":"GO:0018580"}


