# terms

id: SO:0001260
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A collection of discontinuous sequences.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence_collection","synonyms":[{"name":"sequence collection","type":"exact"}],"termid":"SO:0001260"}


id: PR:O59761
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13930:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1020.08","secondary_identifiers":["UniProtKB:O59761"],"synonyms":[{"name":"SPCC1020.08","type":"related"},{"name":"Spom972h-TYW1","type":"exact"},{"name":"tRNA wybutosine-synthesizing protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59761"}


id: PBO:0047369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 22","termid":"PBO:0047369"}


id: MONDO:0006320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Melanoma is a malignant tumor of melanocytes, cells that are derived from the neural crest. Although most melanomas arise in the skin, they also may arise from mucosal surfaces or at other sites to which neural crest cells migrate. (PDQ)","definition_xrefs":["NCIT:C8711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanoma","termid":"MONDO:0005105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-cutaneous melanoma","secondary_identifiers":["EFO:1000397","MEDGEN:233761","UMLS:C1334974"],"synonyms":[{"name":"extracutaneous melanoma","type":"exact"},{"name":"non-cutaneous melanoma","type":"exact"}],"termid":"MONDO:0006320","xrefs":{"Monarch":{"xref_id":"0006320"}}}


id: MONDO:0005585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of hypertension that occurs as a direct result of chemotherapy treatment","definition_xrefs":["EFO:0005942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertensive disorder","termid":"MONDO:0005044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chemotherapy-induced hypertension","termid":"MONDO:0005585","xrefs":{"Monarch":{"xref_id":"0005585"}}}


id: FYPO:0005255
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a carboxypeptidase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peptidase activity","termid":"FYPO:0000666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abnormal carboxypeptidase activity","termid":"FYPO:0005255"}


id: PBO:0052929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 20-1","termid":"PBO:0052929"}


id: PBO:0039976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 4D","termid":"PBO:0039976"}


id: PBO:0083119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA Topoisomerase III; conserved protein that functions in a complex with Sgs1p and Rmi1p to relax single-stranded negatively-supercoiled DNA preferentially; DNA catenation/decatenation activity is stimulated by RPA and Sgs1p-Top3p-Rmi1p; involved in telomere stability and regulation of mitotic recombination","termid":"PBO:0083119"}


id: MONDO:1010459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypertrophic cardiomyopathy that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrophic cardiomyopathy, non-human animal","termid":"MONDO:1010015"},{"relation_name":"is_a","term_name":"cardiomyopathy, domestic cat","termid":"MONDO:1010442"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophic cardiomyopathy, domestic cat","secondary_identifiers":["OMIA:000515-9685"],"termid":"MONDO:1010459","xrefs":{"Monarch":{"xref_id":"1010459"}}}


id: GO:0002922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of a humoral immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of humoral immune response","termid":"GO:0002920"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"positively_regulates","term_name":"humoral immune response","termid":"GO:0006959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of humoral immune response","synonyms":[{"name":"activation of humoral immune response","type":"narrow"},{"name":"stimulation of humoral immune response","type":"narrow"},{"name":"up regulation of humoral immune response","type":"exact"},{"name":"up-regulation of humoral immune response","type":"exact"},{"name":"upregulation of humoral immune response","type":"exact"}],"termid":"GO:0002922"}


id: PBO:0035716
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-T-shaped_cell_during_recovery_from_quiescence","termid":"PBO:0035716"}


id: MONDO:0010500
data:
  {"annotated_genes":["SJAG_03900"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87096],"is_not":false,"summary":null,"term":"MONDO:0010500"}]},"cv_name":"mondo","definition":"Any X-linked syndromic intellectual disability in which the cause of the disease is a mutation in the TAF1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03900":null},"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked, syndromic 33","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:300966","UMLS:C4225418","MEDGEN:895979"],"synonyms":[{"name":"MRXS33","type":"exact"},{"name":"TAF1 X-linked syndromic intellectual disability","type":"exact"},{"name":"X-linked syndromic intellectual disability caused by mutation in TAF1","type":"exact"},{"name":"intellectual developmental disorder, X-linked syndromic 33, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked, syndromic 33","type":"exact"},{"name":"intellectual disability, X-linked, syndromic type 33","type":"exact"},{"name":"mental retardation, X-linked, syndromic 33","type":"exact"},{"name":"mental retardation, X-linked, syndromic type 33","type":"exact"}],"termid":"MONDO:0010500","terms_by_termid":{"MONDO:0010500":null},"xrefs":{"Monarch":{"xref_id":"0010500"}}}


id: GO:0002594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antigen processing and presentation of antigen via MHC class Ib.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation","termid":"GO:0002579"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation via MHC class Ib","termid":"GO:0002592"},{"relation_name":"positively_regulates","term_name":"antigen processing and presentation via MHC class Ib","termid":"GO:0002475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antigen processing and presentation via MHC class Ib","synonyms":[{"name":"activation of antigen processing and presentation via MHC class Ib","type":"narrow"},{"name":"stimulation of antigen processing and presentation via MHC class Ib","type":"narrow"},{"name":"up regulation of antigen processing and presentation via MHC class Ib","type":"exact"},{"name":"up-regulation of antigen processing and presentation via MHC class Ib","type":"exact"},{"name":"upregulation of antigen processing and presentation via MHC class Ib","type":"exact"}],"termid":"GO:0002594"}


id: MONDO:0100468
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital myopathy in which a family of 6 siblings presented in infancy the picture of 'amyotonia congenita' and later in life a nonprogressive myopathy.","definition_xrefs":["OMIM:255300"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"Batten-Turner congenital myopathy","secondary_identifiers":["DOID:0081335","MEDGEN:10158","UMLS:C0027127"],"termid":"MONDO:0100468","xrefs":{"Monarch":{"xref_id":"0100468"}}}


id: PBO:0047200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 217 member A","termid":"PBO:0047200"}


id: PR:O13701
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ptr6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID subunit 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13F5.02c","synonyms":[{"name":"Spom972h-ptr6","type":"exact"},{"name":"TAFII-55 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcription initiation factor TFIID 55 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13701"}


id: GO:0016806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of N-terminal di- or tripeptides from a polypeptide chain.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete dipeptidyl-peptidase and tripeptidyl-peptidase activity (obsolete GO:0016806)","synonyms":[{"name":"dipeptidyl-peptidase and tripeptidyl-peptidase activity","type":"exact"}],"termid":"GO:0016806"}


id: MONDO:0035788
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic anorectal malformation with anal stenosis (obsolete MONDO:0035788)","secondary_identifiers":["Orphanet:601008"],"termid":"MONDO:0035788","xrefs":{"Monarch":{"xref_id":"0035788"}}}


id: GO:0061982
data:
  {"annotated_genes":["SJAG_03525","SJAG_01371","SJAG_05319","SJAG_03219","SJAG_01076","SJAG_02822","SJAG_05373","SJAG_05019","SJAG_00229","SJAG_02187","SJAG_05295","SJAG_03680","SJAG_04076","SJAG_02556","SJAG_01410","SJAG_04303","SJAG_01263","SJAG_05266","SJAG_04287","SJAG_04748","SJAG_01138","SJAG_02814","SJAG_01601","SJAG_01538","SJAG_03685","SJAG_00980","SJAG_02267","SJAG_00368","SJAG_04259","SJAG_03926","SJAG_01224","SJAG_01044","SJAG_01156","SJAG_02708","SJAG_05185","SJAG_03221","SJAG_03683","SJAG_03989","SJAG_00757","SJAG_02346","SJAG_02771","SJAG_00623","SJAG_00600","SJAG_03681","SJAG_03751","SJAG_02561","SJAG_04623","SJAG_01515","SJAG_01832","SJAG_02606","SJAG_00418","SJAG_04457","SJAG_02104","SJAG_01863","SJAG_01662","SJAG_05323","SJAG_03854","SJAG_00397","SJAG_00364","SJAG_05333","SJAG_04001","SJAG_00172","SJAG_04280","SJAG_05196","SJAG_05220","SJAG_02295","SJAG_00100","SJAG_01067","SJAG_03073","SJAG_00377","SJAG_00756","SJAG_04143","SJAG_01775","SJAG_04126","SJAG_00935","SJAG_04950","SJAG_01620","SJAG_03287","SJAG_01330","SJAG_03673","SJAG_03437","SJAG_05260","SJAG_03217","SJAG_01837","SJAG_02045","SJAG_00908","SJAG_02460","SJAG_04332","SJAG_01419","SJAG_01708","SJAG_02181","SJAG_02286","SJAG_02616","SJAG_00140","SJAG_02652","SJAG_03092","SJAG_03942","SJAG_03698","SJAG_01873","SJAG_02490","SJAG_00918","SJAG_03048","SJAG_00666","SJAG_02731","SJAG_03327","SJAG_05226","SJAG_00794","SJAG_04271","SJAG_03567","SJAG_02465","SJAG_03720","SJAG_07002","SJAG_02339","SJAG_03220","SJAG_01677","SJAG_01370","SJAG_00113","SJAG_02311","SJAG_02294","SJAG_01082","SJAG_00727","SJAG_01805","SJAG_02737","SJAG_01211","SJAG_01777","SJAG_01278"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59235],"is_not":false,"summary":null,"term":"GO:0061982"},{"annotations":[90357,118658,90977,109495,100868],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990918"},{"annotations":[105078,104787,112904,115804,92805,93661,97024,93197,99390,113255,89571,118807,102545],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030989"},{"annotations":[118925,89626,92098,115642,117399,109656,100432,103155,95606],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031619"},{"annotations":[112401,89572,109657,113077,80574],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007129"},{"annotations":[62362,118726,91175,61538],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045143"},{"annotations":[108422,103255,113078],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032118"},{"annotations":[91409,118926],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030999"},{"annotations":[119107,109552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007127"},{"annotations":[116356,108146],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905318"},{"annotations":[91579,65551],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070197"},{"annotations":[101742,104640,89209,106934,91580],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032121"},{"annotations":[103614,115643,117761,106321,115083,100935,109658,116357,103089,95610],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990813"},{"annotations":[81120,108557,90981,81137,96565,93283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042138"},{"annotations":[110587,92150,112979,106707,111491],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0010780"},{"annotations":[80293],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000707"},{"annotations":[109497,112149],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0010772"},{"annotations":[93242,117917,108447],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0033315"},{"annotations":[91108,102365],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006311"},{"annotations":[112150,118967,109498,98729,90298,80569,64213,103343],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000709"},{"annotations":[109585,58176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000710"},{"annotations":[112028,95693],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051755"},{"annotations":[102463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902346"},{"annotations":[109499,112151,100871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000708"},{"annotations":[102367,90299,80572],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0010774"},{"annotations":[119422,117803,98529,119560],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045141"},{"annotations":[115844],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044821"},{"annotations":[100504,101958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990949"},{"annotations":[80337,72427],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0110031"},{"annotations":[75219],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0110032"},{"annotations":[115646],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[104198,110199],"is_not":false,"rel_names":["regulates","positively_regulates","part_of"],"summary":null,"term":"GO:1905263"},{"annotations":[94492,102402,105686,93284,79520,102961,106150,81121,92617,102465,108558,106671,70921,91412,94565,72783,117400],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007131"},{"annotations":[103158],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"},{"annotations":[118542],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904967"},{"annotations":[73488,76670,110925,109986,119162,81049,78576,76076,112173,119309],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0000712"},{"annotations":[118093],"is_not":false,"rel_names":["part_of","regulates"],"summary":null,"term":"GO:0062209"},{"annotations":[115086,99718,92794,97376,107303,110729,103159,97130,112163,104257,100440,102342,111739,115956,117786,95623,109660,118779,91564,109342,90958,110986,112207],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051455"}]},"cv_name":"biological_process","definition":"A process that contributes to the first meiotic division. The first meiotic division is the reductive division resulting in the separation of homologous chromosome pairs.","definition_xrefs":["PMID:29385397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":126,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00113":null,"SJAG_00140":null,"SJAG_00172":null,"SJAG_00229":null,"SJAG_00364":null,"SJAG_00368":null,"SJAG_00377":null,"SJAG_00397":null,"SJAG_00418":null,"SJAG_00600":null,"SJAG_00623":null,"SJAG_00666":null,"SJAG_00727":null,"SJAG_00756":null,"SJAG_00757":null,"SJAG_00794":null,"SJAG_00908":null,"SJAG_00918":null,"SJAG_00935":null,"SJAG_00980":null,"SJAG_01044":null,"SJAG_01067":null,"SJAG_01076":null,"SJAG_01082":null,"SJAG_01138":null,"SJAG_01156":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01263":null,"SJAG_01278":null,"SJAG_01330":null,"SJAG_01370":null,"SJAG_01371":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01515":null,"SJAG_01538":null,"SJAG_01601":null,"SJAG_01620":null,"SJAG_01662":null,"SJAG_01677":null,"SJAG_01708":null,"SJAG_01775":null,"SJAG_01777":null,"SJAG_01805":null,"SJAG_01832":null,"SJAG_01837":null,"SJAG_01863":null,"SJAG_01873":null,"SJAG_02045":null,"SJAG_02104":null,"SJAG_02181":null,"SJAG_02187":null,"SJAG_02267":null,"SJAG_02286":null,"SJAG_02294":null,"SJAG_02295":null,"SJAG_02311":null,"SJAG_02339":null,"SJAG_02346":null,"SJAG_02460":null,"SJAG_02465":null,"SJAG_02490":null,"SJAG_02556":null,"SJAG_02561":null,"SJAG_02606":null,"SJAG_02616":null,"SJAG_02652":null,"SJAG_02708":null,"SJAG_02731":null,"SJAG_02737":null,"SJAG_02771":null,"SJAG_02814":null,"SJAG_02822":null,"SJAG_03048":null,"SJAG_03073":null,"SJAG_03092":null,"SJAG_03217":null,"SJAG_03219":null,"SJAG_03220":null,"SJAG_03221":null,"SJAG_03287":null,"SJAG_03327":null,"SJAG_03437":null,"SJAG_03525":null,"SJAG_03567":null,"SJAG_03673":null,"SJAG_03680":null,"SJAG_03681":null,"SJAG_03683":null,"SJAG_03685":null,"SJAG_03698":null,"SJAG_03720":null,"SJAG_03751":null,"SJAG_03854":null,"SJAG_03926":null,"SJAG_03942":null,"SJAG_03989":null,"SJAG_04001":null,"SJAG_04076":null,"SJAG_04126":null,"SJAG_04143":null,"SJAG_04259":null,"SJAG_04271":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04303":null,"SJAG_04332":null,"SJAG_04457":null,"SJAG_04623":null,"SJAG_04748":null,"SJAG_04950":null,"SJAG_05019":null,"SJAG_05185":null,"SJAG_05196":null,"SJAG_05220":null,"SJAG_05226":null,"SJAG_05260":null,"SJAG_05266":null,"SJAG_05295":null,"SJAG_05319":null,"SJAG_05323":null,"SJAG_05333":null,"SJAG_05373":null,"SJAG_07002":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"meiosis I cell cycle process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"first meiotic cell division","type":"exact"}],"termid":"GO:0061982","terms_by_termid":{"GO:0000707":null,"GO:0000708":null,"GO:0000709":null,"GO:0000710":null,"GO:0000712":null,"GO:0006311":null,"GO:0007127":null,"GO:0007129":null,"GO:0007131":null,"GO:0010772":null,"GO:0010774":null,"GO:0010780":null,"GO:0030989":null,"GO:0030999":null,"GO:0031619":null,"GO:0032118":null,"GO:0032121":null,"GO:0033315":null,"GO:0042138":null,"GO:0044821":null,"GO:0045141":null,"GO:0045143":null,"GO:0051455":null,"GO:0051755":null,"GO:0061982":null,"GO:0062209":null,"GO:0070197":null,"GO:0110031":null,"GO:0110032":null,"GO:1902346":null,"GO:1904967":null,"GO:1905263":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:1990813":null,"GO:1990918":null,"GO:1990949":null}}


id: PBO:0113172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Invertase; sucrose hydrolyzing enzyme; seven closely related but non-identical invertase genes have been described in yeast (SUC1-5, 7, 8) but only SUC2 is in the reference strain (S288C); mapped to 146.0 cM on chrII","termid":"PBO:0113172"}


id: PR:O42984
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1701 gene.","definition_xrefs":["UniProtKB:O42984","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S17-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.05c","synonyms":[{"name":"Spom972h-rps1701","type":"exact"}],"termid":"PR:O42984"}


id: MONDO:0005804
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormally high level of prolactin in the blood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperpituitarism","termid":"MONDO:0006793"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperprolactinemia","secondary_identifiers":["HP:0000870","ICD10CM:E22.1","SCTID:237662005","ICD9:253.1","NANDO:2100115","MESH:D006966","UMLS:C0020514","NANDO:2200322","MEDGEN:5698","EFO:0007319"],"synonyms":[{"name":"hyperprolactinaemia","type":"exact"},{"name":"hyperprolactinemia","type":"exact"},{"name":"hyperprolactinemia (disease)","type":"exact"},{"name":"hyperprolactinemias","type":"related"},{"name":"hypersecretion syndrome, prolactin","type":"related"},{"name":"inappropriate prolactin secretion","type":"related"},{"name":"inappropriate prolactin secretion syndrome","type":"related"},{"name":"inappropriate secretion prolactin","type":"related"},{"name":"prolactin hypersecretion syndrome","type":"related"},{"name":"prolactin secretion, inappropriate","type":"related"},{"name":"prolactin, inappropriate secretion","type":"related"},{"name":"secretion prolactin, inappropriate","type":"related"},{"name":"secretion, inappropriate prolactin","type":"related"},{"name":"syndrome, prolactin hypersecretion","type":"related"}],"termid":"MONDO:0005804","xrefs":{"Monarch":{"xref_id":"0005804"}}}


id: PBO:0047419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and WD repeat domain containing 10","termid":"PBO:0047419"}


id: PATO:0001574
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's motion characteristic.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement quality","termid":"PATO:0001906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flow rate","termid":"PATO:0001574"}


id: GO:0030778
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + columbamine = S-adenosyl-L-homocysteine + H+ + palmatine.","definition_xrefs":["EC:2.1.1.118","RHEA:15373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"columbamine O-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03721","MetaCyc:2.1.1.118-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:columbamine O-methyltransferase activity","type":"related"}],"termid":"GO:0030778"}


id: PBO:0075899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppression of tumorigenicity 7 like","termid":"PBO:0075899"}


id: MONDO:0006356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive carcinoma that arises from the parotid gland. It is characterized by the presence of malignant epithelial and myoepithelial cells forming cribriform, tubular, and solid patterns. It usually presents as a slow growing mass. Patients develop pain because of the tendency of these carcinomas to invade perineural tissues.","definition_xrefs":["NCIT:C5937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma of parotid gland","termid":"MONDO:0021331"},{"relation_name":"is_a","term_name":"major salivary gland adenoid cystic carcinoma","termid":"MONDO:0045063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"parotid gland adenoid cystic carcinoma","secondary_identifiers":["UMLS:C1335355","SCTID:423615009","DOID:0050931","EFO:1000459","MEDGEN:277502"],"synonyms":[{"name":"adenoid cystic carcinoma of parotid","type":"exact"},{"name":"adenoid cystic carcinoma of parotid gland","type":"exact"},{"name":"adenoid cystic carcinoma of the parotid","type":"exact"},{"name":"adenoid cystic carcinoma of the parotid gland","type":"exact"},{"name":"parotid adenoid cystic carcinoma","type":"exact"},{"name":"parotid gland adenoid cystic carcinoma","type":"exact"}],"termid":"MONDO:0006356","xrefs":{"Monarch":{"xref_id":"0006356"}}}


id: PBO:0036505
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human COQ5","termid":"PBO:0036505"}


id: PBO:0031883
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae RBL2","termid":"PBO:0031883"}


id: MONDO:0015564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Castleman disease (CD) is a benign lymphoproliferative disorder that may present as a localized or multicentric form. The clinical manifestations are heterogeneous, ranging from asymptomatic discrete lymphadenopathy to recurrent episodes of diffuse lymphadenopathy with severe systemic symptoms.","definition_xrefs":["Orphanet:160"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"human herpesvirus 8-related tumor","termid":"MONDO:0015157"},{"relation_name":"excluded_subClassOf","term_name":"lymphoid hemopathy","termid":"MONDO:0015757"},{"relation_name":"is_a","term_name":"lymphoproliferative syndrome","termid":"MONDO:0016537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Castleman disease","secondary_identifiers":["UMLS:C0017531","SCTID:207036003","DOID:0111157","NORD:898","MedDRA:10050251","MEDGEN:42211","GARD:12656","MESH:D005871","NCIT:C3056","icd11.foundation:1940989685","ICD10CM:D47.Z2"],"synonyms":[{"name":"AFLH","type":"exact"},{"name":"ALNH","type":"related"},{"name":"Castleman disease","type":"exact"},{"name":"Castleman's disease","type":"exact"},{"name":"Castleman's tumor","type":"exact"},{"name":"Castleman's tumour","type":"exact"},{"name":"GLNH","type":"exact"},{"name":"angiofollicular ganglionic hyperplasia","type":"exact"},{"name":"angiofollicular lymph hyperplasia","type":"exact"},{"name":"angiofollicular lymph node hyperplasia","type":"exact"},{"name":"angiofollicular lymphoid hyperplasia","type":"exact"},{"name":"giant lymph node hyperplasia","type":"exact"},{"name":"lymphoid hamartoma","type":"exact"}],"termid":"MONDO:0015564","xrefs":{"Monarch":{"xref_id":"0015564"}}}


id: GO:1902249
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to IMP, inosine monophosphate.","definition_xrefs":["PMID:4314233","GOC:mah","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide binding","termid":"GO:0032555"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"IMP binding","termid":"GO:1902249"}


id: MONDO:0019933
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acromegaly is an acquired disorder related to excessive production of growth hormone (GH) and characterized by progressive somatic disfigurement (mainly involving the face and extremities) and systemic manifestations.","definition_xrefs":["Orphanet:963"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"growth hormone secreting pituitary adenoma 1","termid":"MONDO:0007052"},{"relation_name":"is_a","term_name":"hyperpituitarism","termid":"MONDO:0006793"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acromegaly","secondary_identifiers":["EFO:1001485","DOID:2449","GARD:5725","MedDRA:10000599","NANDO:2100112","NANDO:2200315","MESH:D000172","NCIT:C84533","NORD:723","MEDGEN:1304","SCTID:74107003","UMLS:C0001206"],"synonyms":[{"name":"Growth hormone excess","type":"related"},{"name":"pituitary giant","type":"related"},{"name":"somatotroph adenoma","type":"related"}],"termid":"MONDO:0019933","xrefs":{"Monarch":{"xref_id":"0019933"}}}


id: GO:0085001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a stylet, a hollow protrusible spear-like symbiont structure projected into the host cell for the purpose of obtaining nutrients. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of specialized structure for nutrient acquisition","termid":"GO:0052093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of stylet for nutrient acquisition","synonyms":[{"name":"formation by symbiont of stylet for nutrient acquisition from host","type":"related"}],"termid":"GO:0085001"}


id: PBO:0036233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 involved in DNA repair Rad8","termid":"PBO:0036233"}


id: GO:0021755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroblasts acquire specialized structural and/or functional features that characterize the mature eurydendroid cell. Differentiation includes the processes involved in commitment of a neuroblast to a eurydendroid cell fate. A eurydendroid cell is an efferent neuron found in the cerebellar cortex of teleosts.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:jid","GOC:dph","PMID:15892096","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in hindbrain","termid":"GO:0021533"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"part_of","term_name":"cerebellar cortex formation","termid":"GO:0021697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eurydendroid cell differentiation","termid":"GO:0021755"}


id: MONDO:0031219
data:
  {"annotated_genes":["SJAG_01620","SJAG_02748","SJAG_02226","SJAG_02187"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010159"},{"annotations":[87561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030840"},{"annotations":[87562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030841"},{"annotations":[87477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030843"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair disease","termid":"MONDO:0021190"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01620":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02748":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021190"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021190"],"is_obsolete":false,"name":"mismatch repair cancer syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:78553","DOID:0112182","GARD:17217","Orphanet:252202","UMLS:C0265325","OMIMPS:276300"],"termid":"MONDO:0031219","terms_by_termid":{"MONDO:0010159":null,"MONDO:0030840":null,"MONDO:0030841":null,"MONDO:0030843":null},"xrefs":{"Monarch":{"xref_id":"0031219"}}}


id: GO:0000315
data:
  {"annotated_genes":["SJAG_01478","SJAG_01719","SJAG_05218","SJAG_01303","SJAG_03459","SJAG_05244","SJAG_04490","SJAG_01045","SJAG_00844","SJAG_01413","SJAG_03176","SJAG_03040","SJAG_04019","SJAG_01463","SJAG_04889","SJAG_05573","SJAG_01630","SJAG_04689","SJAG_02762","SJAG_02836","SJAG_03284","SJAG_04207","SJAG_07009","SJAG_00315","SJAG_06253","SJAG_04244","SJAG_03192","SJAG_04493","SJAG_01829","SJAG_03649","SJAG_04216","SJAG_01591","SJAG_03297","SJAG_03636","SJAG_01727","SJAG_01473","SJAG_00086","SJAG_05270","SJAG_04893","SJAG_02071","SJAG_06110","SJAG_00799","SJAG_00497","SJAG_03402"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76560,78359,118012,105501,112953,114579,80992,74208,80175,99772,79864,107532,79892,108588,72504,77355,115305,99793,82179,77128,112624,116450,116568,73885,71366,74803,110015,114078,79632,109916,118121,111686,72944,79039,78388,81469,74542,81152,110065,81602,119779,98408,73557,68362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005762"}]},"cv_name":"cellular_component","definition":"The larger of the two subunits of an organellar ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site).","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large ribosomal subunit","termid":"GO:0015934"},{"relation_name":"part_of","term_name":"organellar ribosome","termid":"GO:0000313"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00086":null,"SJAG_00315":null,"SJAG_00497":null,"SJAG_00799":null,"SJAG_00844":null,"SJAG_01045":null,"SJAG_01303":null,"SJAG_01413":null,"SJAG_01463":null,"SJAG_01473":null,"SJAG_01478":null,"SJAG_01591":null,"SJAG_01630":null,"SJAG_01719":null,"SJAG_01727":null,"SJAG_01829":null,"SJAG_02071":null,"SJAG_02762":null,"SJAG_02836":null,"SJAG_03040":null,"SJAG_03176":null,"SJAG_03192":null,"SJAG_03284":null,"SJAG_03297":null,"SJAG_03402":null,"SJAG_03459":null,"SJAG_03636":null,"SJAG_03649":null,"SJAG_04019":null,"SJAG_04207":null,"SJAG_04216":null,"SJAG_04244":null,"SJAG_04490":null,"SJAG_04493":null,"SJAG_04689":null,"SJAG_04889":null,"SJAG_04893":null,"SJAG_05218":null,"SJAG_05244":null,"SJAG_05270":null,"SJAG_05573":null,"SJAG_06110":null,"SJAG_06253":null,"SJAG_07009":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"organellar large ribosomal subunit","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000315","terms_by_termid":{"GO:0005762":null}}


id: PBO:0055110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2529","termid":"PBO:0055110"}


id: GO:0034526
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-methylnaphthalene + NADH + O2 + H+ = 2-hydroxymethylnaphthalene + NAD+ + H2O.","definition_xrefs":["UM-BBD_reactionID:r0788"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-methylnaphthalene hydroxylase activity (obsolete GO:0034526)","termid":"GO:0034526"}


id: FYPO:0006759
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which chromosome organization is abnormal during the meiotic cell cycle.","definition_xrefs":["PomBase:mah","GO:0070192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"},{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle process","termid":"FYPO:0002739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000641","FYPO:0001985","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abnormal meiotic chromosome organization","synonyms":[{"name":"abnormal chromosome organization during meiotic cell cycle","type":"exact"},{"name":"abnormal chromosome organization involved in meiotic cell cycle","type":"exact"},{"name":"abnormal meiotic chromosome organisation","type":"exact"}],"termid":"FYPO:0006759"}


id: PBO:0082372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Basic leucine zipper (bZIP) transcription factor; physically interacts with the Tup1-Cyc8 complex and recruits Tup1p to its targets; overexpression increases sodium and lithium tolerance; computational analysis suggests a role in regulation of expression of genes involved in carbohydrate metabolism; YAP6 has a paralog, CIN5, that arose from the whole genome duplication","termid":"PBO:0082372"}


id: PBO:0071080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 82","termid":"PBO:0071080"}


id: PBO:0000411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 4 (predicted)","termid":"PBO:0000411"}


id: PBO:0064902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 3 catalytic subunit beta","termid":"PBO:0064902"}


id: PBO:0004526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cullin 1 adaptor protein Pop1","termid":"PBO:0004526"}


id: PBO:0056318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 4","termid":"PBO:0056318"}


id: GO:0030449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of complement activation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of humoral immune response","termid":"GO:0002920"},{"relation_name":"regulates","term_name":"complement activation","termid":"GO:0006956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of complement activation","secondary_identifiers":["Reactome:R-HSA-977606"],"synonyms":[{"name":"regulation of complement cascade","type":"exact"}],"termid":"GO:0030449"}


id: PBO:0060009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 29","termid":"PBO:0060009"}


id: GO:0051543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of elastin.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of elastin biosynthetic process (obsolete GO:0051543)","termid":"GO:0051543"}


id: PR:Q09902
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC30D11.02c gene.","definition_xrefs":["UniProtKB:Q09902","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 144 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30D11.02c","synonyms":[{"name":"Spom972h-SPAC30D11.02c","type":"exact"}],"termid":"PR:Q09902"}


id: GO:0042088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response which is associated with resistance to intracellular bacteria, fungi, and protozoa, and pathological conditions such as arthritis, and which is typically orchestrated by the production of particular cytokines by T-helper 1 cells, most notably interferon-gamma, IL-2, and lymphotoxin.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 1 type immune response","synonyms":[{"name":"Th1 immune response","type":"exact"}],"termid":"GO:0042088"}


id: PBO:0031092
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_cell_at_high_temperature","termid":"PBO:0031092"}


id: GO:0036501
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dimeric protein complex that contains the co-factors for the ATPase VCP/p97 (Cdc48p in budding yeast). In mammals, this complex consists of UFD1L (UFD1) and NPLOC4 (NPL4). In budding yeast, the complex is a dimer of Ufd1p and Npl4p.","definition_xrefs":["GOC:bf","PMID:10811609","GOC:PARL","PMID:17289586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"UFD1-NPL4 complex","synonyms":[{"name":"Npl4p-Ufd1p complex","type":"exact"},{"name":"UFD1L-NPLOC4 complex","type":"exact"},{"name":"Ufd1-Npl4 binary complex","type":"exact"},{"name":"Ufd1-Npl4 cofactor complex","type":"exact"},{"name":"Ufd1/Npl4 complex","type":"exact"}],"termid":"GO:0036501"}


id: PBO:0049935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HHIP like 1","termid":"PBO:0049935"}


id: PBO:0057896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3199-1","termid":"PBO:0057896"}


id: MONDO:0016748
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemangioblastoma is a rare, benign, highly vascularized tumor of the central nervous system, most often located in the cerebellum or spinal cord, presenting in adulthood and manifesting with dizziness, nausea, malaise, headache, bladder or bowel dysfunction, numbness, weakness and pain in the upper or lower extremities, and often associated with von Hippel-Lindau disease (VHL). Exceptional cases of hemangioblastoma arising outside of the central nervous system have been reported.","definition_xrefs":["Orphanet:252054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system benign neoplasm","termid":"MONDO:0000648"},{"relation_name":"is_a","term_name":"capillary hemangioma","termid":"MONDO:0002407"},{"relation_name":"is_a","term_name":"neurovascular disorder","termid":"MONDO:0043218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemangioblastoma","secondary_identifiers":["GARD:8232","MESH:D018325","ICDO:9161/1","NCIT:C3801","ONCOTREE:HMBL","ICD10CM:D33.4","DOID:5241","MedDRA:10018813","MEDGEN:104929","UMLS:C0206734"],"synonyms":[{"name":"HMBL","type":"related"},{"name":"angioblastoma","type":"exact"},{"name":"capillary hemangioblastoma","type":"exact"},{"name":"hemangioblastoma","type":"exact"}],"termid":"MONDO:0016748","xrefs":{"Monarch":{"xref_id":"0016748"}}}


id: MONDO:0014310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary fibrosing poikiloderma-tendon contractures-myopathy-pulmonary fibrosis syndrome is a rare, genetic, hereditary poikiloderma syndrome characterized by early-onset poikiloderma (mainly on the face), hypotrichosis, hypohidrosis, muscle and tendon contractures with varus foot deformity, progressive proximal and distal muscle weakness in all extremities, and progressive pulmonary fibrosis. Mild lymphedema of the extremities, growth retardation, liver impairment, exocrine pancreatic insufficiency and hematologic abnormalities are additional variable features.","definition_xrefs":["Orphanet:221043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"hereditary poikiloderma","termid":"MONDO:0016382"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hereditary sclerosing poikiloderma with tendon and pulmonary involvement","secondary_identifiers":["icd11.foundation:1585528459","MEDGEN:816655","OMIM:615704","UMLS:C3810325","GARD:13218"],"synonyms":[{"name":"POIKTMP","type":"related"},{"name":"POIKTMP syndrome","type":"exact"},{"name":"hereditary fibrosing poikiloderma with tendon contractures, myopathy, and pulmonary fibrosis","type":"related"},{"name":"hereditary fibrosing poikiloderma-tendon contractures-myopathy-pulmonary fibrosis syndrome","type":"related"},{"name":"poikiloderma, hereditary fibrosing, with tendon contractures, myopathy, and pulmonary fibrosis","type":"related"},{"name":"poikiloderma, hereditary sclerosing, with tendon and pulmonary involvement","type":"related"}],"termid":"MONDO:0014310","xrefs":{"Monarch":{"xref_id":"0014310"}}}


id: GO:0045995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of embryonic development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"embryo development","termid":"GO:0009790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of embryonic development","termid":"GO:0045995"}


id: PBO:0026689
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_tamoxifen","termid":"PBO:0026689"}


id: PBO:0065615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTP4A2 pseudogene 1","termid":"PBO:0065615"}


id: PATO:0005022
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A diameter that remains constant throughout the extent of an entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diameter","termid":"PATO:0001334"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uniform diameter","termid":"PATO:0005022"}


id: GO:0021746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the solitary nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GOC:curators","GO_REF:0000021","GOC:jid","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"medulla oblongata development","termid":"GO:0021550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"solitary nucleus development","termid":"GO:0021746"}


id: PBO:0087868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator that enhances pseudohyphal growth; physically interacts with the Tup1-Cyc8 complex and recruits Tup1p to its targets; regulates expression of FLO11, an adhesin required for pseudohyphal filament formation; similar to StuA, an A. nidulans developmental regulator; potential Cdc28p substrate; PHD1 has a paralog, SOK2, that arose from the whole genome duplication","termid":"PBO:0087868"}


id: PBO:0065352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN13 like Y-linked pseudogene 2","termid":"PBO:0065352"}


id: PBO:0086529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains","termid":"PBO:0086529"}


id: SO:0000407
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cytosolic 18S rRNA is an RNA component of the small subunit of cytosolic ribosomes in eukaryotes.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"cytosolic_rRNA_18S_gene","termid":"SO:0002236"},{"relation_name":"is_a","term_name":"cytosolic_SSU_rRNA","termid":"SO:0000650"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_18S_rRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/18S_ribosomal_RNA"],"synonyms":[{"name":"cytosolic 18S rRNA","type":"exact"},{"name":"cytosolic 18S ribosomal RNA","type":"exact"},{"name":"cytosolic rRNA 18S","type":"exact"}],"termid":"SO:0000407"}


id: FYPO:0003809
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing latrunculin A.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002058","FYPO:0002060","FYPO:0000003","FYPO:0000257","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on latrunculin A","synonyms":[{"name":"normal cell population growth in presence of latrunculin A","type":"exact"},{"name":"normal cell population growth on latrunculin A","type":"exact"},{"name":"normal cellular response to latrunculin A","type":"related"},{"name":"normal growth on LAT-A","type":"exact"},{"name":"normal growth on LatA","type":"exact"},{"name":"normal vegetative cell population growth on latrunculin A","type":"exact"}],"termid":"FYPO:0003809"}


id: PBO:0083502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified non essential genes ERV2/YPR037C and TIP41/YPR040W","termid":"PBO:0083502"}


id: PBO:0055841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and immunoglobulin like domains 2","termid":"PBO:0055841"}


id: PBO:0055770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long non-coding regulator of POU2F2","termid":"PBO:0055770"}


id: MONDO:0100404
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly MLL gene rearrangement. (A molecular abnormality indicating rearrangement of the MLL (KMT2A) gene.)","definition_xrefs":["NCIT:C122623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"acute myeloid leukemia, MLL gene rearrangement","secondary_identifiers":["NCIT:C174129","DOID:0081094"],"synonyms":[{"name":"AML, KMT2A Gene Rearrangement","type":"exact"},{"name":"AML, KMT2A Rearrangement","type":"exact"},{"name":"AML, Lysine (K)-Specific Methyltransferase 2A Gene Rearrangement","type":"exact"},{"name":"AML, Lysine Methyltransferase 2A Gene Rearrangement","type":"exact"},{"name":"AML, MLL Rearrangement","type":"exact"},{"name":"AML, MLL gene rearrangement","type":"exact"},{"name":"AML, Mixed Lineage Leukaemia Gene Rearrangement","type":"exact"},{"name":"AML, Mixed Lineage Leukemia Gene Rearrangement","type":"exact"},{"name":"AML, Myeloid/Lymphoid Leukaemia Gene Rearrangement","type":"exact"},{"name":"AML, Myeloid/Lymphoid Leukemia Gene Rearrangement","type":"exact"},{"name":"AML, Myeloid/Lymphoid or Mixed Lineage Leukaemia Gene Rearrangement","type":"exact"},{"name":"AML, Myeloid/Lymphoid or Mixed Lineage Leukemia Gene Rearrangement","type":"exact"},{"name":"AML, Myeloid/Lymphoid or Mixed-Lineage Leukaemia (Trithorax Homolog, Drosophila) Gene Rearrangement","type":"exact"},{"name":"AML, Myeloid/Lymphoid or Mixed-Lineage Leukemia (Trithorax Homolog, Drosophila) Gene Rearrangement","type":"exact"}],"termid":"MONDO:0100404","xrefs":{"Monarch":{"xref_id":"0100404"}}}


id: PBO:0043909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytokine receptor like factor 2","termid":"PBO:0043909"}


id: GO:1900980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phenazine biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"regulates","term_name":"phenazine biosynthetic process","termid":"GO:0002047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of phenazine biosynthetic process","synonyms":[{"name":"regulation of acridizine biosynthesis","type":"related"},{"name":"regulation of acridizine biosynthetic process","type":"related"},{"name":"regulation of azophenylene biosynthesis","type":"related"},{"name":"regulation of azophenylene biosynthetic process","type":"related"},{"name":"regulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"regulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"regulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"regulation of dibenzopyrazine biosynthetic process","type":"related"}],"termid":"GO:1900980"}


id: GO:0004923
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with leukemia inhibitory factor (LIF) and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:mah","GOC:bf","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary neurotrophic factor receptor activity","termid":"GO:0004897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"leukemia inhibitory factor receptor activity","secondary_identifiers":["GO:0004899"],"synonyms":[{"name":"LIF receptor activity","type":"exact"},{"name":"leukemia inhibitory factor receptor beta-protein activity","type":"narrow"}],"termid":"GO:0004923"}


id: GO:0010544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate or frequency of platelet activation. Platelet activation is a series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of platelet activation","termid":"GO:0010543"},{"relation_name":"is_a","term_name":"negative regulation of blood coagulation","termid":"GO:0030195"},{"relation_name":"is_a","term_name":"negative regulation of cell activation","termid":"GO:0050866"},{"relation_name":"negatively_regulates","term_name":"platelet activation","termid":"GO:0030168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of platelet activation","termid":"GO:0010544"}


id: GO:0051570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 9 of histone H3.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K9 methylation (obsolete GO:0051570)","termid":"GO:0051570"}


id: PBO:0048878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family member D","termid":"PBO:0048878"}


id: PBO:0044571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBF4 zinc finger pseudogene 1","termid":"PBO:0044571"}


id: MONDO:0008884
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome is characterized by congenital anodontia, a small maxilla, short stature with shortened metacarpals and metatarsals, sparse hair, albinoidism and multiple ocular anomalies. It has been described in three siblings (one brother and two sisters). Transmission is autosomal recessive.","definition_xrefs":["Orphanet:2713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"oculoosteocutaneous syndrome","secondary_identifiers":["SCTID:722061006","MESH:C565893","UMLS:C1859385","GARD:992","OMIM:211370","MEDGEN:347867"],"synonyms":[{"name":"BRACHYMETAPODY-anodontia-hypotrichosis-ALBINOIDISM","type":"exact"},{"name":"anodontia-hypotrichosis syndrome","type":"exact"},{"name":"brachymetapody anodontia hypotrichosis albinoidism","type":"exact"},{"name":"oculoosteocutaneous syndrome","type":"exact"}],"termid":"MONDO:0008884","xrefs":{"Monarch":{"xref_id":"0008884"}}}


id: PBO:0047780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box D2","termid":"PBO:0047780"}


id: PBO:0052714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 6","termid":"PBO:0052714"}


id: GO:0045176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained in, apical regions of the cell.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"apical protein localization","synonyms":[{"name":"apical protein localisation","type":"exact"},{"name":"establishment and maintenance of apical protein localization","type":"exact"},{"name":"establishment and maintenance of protein localization in apical part of cell","type":"exact"}],"termid":"GO:0045176"}


id: PBO:0004293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rad23 homolog Rhp23","termid":"PBO:0004293"}


id: PBO:0030075
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_valine_import","termid":"PBO:0030075"}


id: PBO:0075912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 4","termid":"PBO:0075912"}


id: GO:1905833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of microtubule nucleation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:27689799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule nucleation","termid":"GO:0010968"},{"relation_name":"is_a","term_name":"negative regulation of microtubule polymerization","termid":"GO:0031115"},{"relation_name":"negatively_regulates","term_name":"microtubule nucleation","termid":"GO:0007020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0065003","GO:0007010","GO:0044085","GO:0008150","GO:0000226"],"is_obsolete":false,"name":"negative regulation of microtubule nucleation","synonyms":[{"name":"down regulation of microtubule nucleation","type":"exact"},{"name":"down-regulation of microtubule nucleation","type":"exact"},{"name":"downregulation of microtubule nucleation","type":"exact"},{"name":"inhibition of microtubule nucleation","type":"narrow"}],"termid":"GO:1905833"}


id: FYPO:0000786
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which plasmids are lost at a higher frequency than normal. Plasmid loss occurs when one or both daughter cells do not inherit copies of a plasmid from the mother cell, and may result from failure of plasmid replication or segregation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased plasmid loss","synonyms":[{"name":"increased plasmid loss during mitotic cell cycle","type":"related"},{"name":"increased plasmid loss during vegetative growth","type":"exact"}],"termid":"FYPO:0000786"}


id: GO:1905486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of anterior/posterior axon guidance.","definition_xrefs":["GO_REF:0000058","PMID:16516839","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of axon guidance","termid":"GO:1902667"},{"relation_name":"regulates","term_name":"anterior/posterior axon guidance","termid":"GO:0033564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of anterior/posterior axon guidance","synonyms":[{"name":"regulation of anterior-posterior axon guidance","type":"exact"},{"name":"regulation of anterior/posterior axon pathfinding","type":"exact"}],"termid":"GO:1905486"}


id: GO:0062137
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any protein complex that is part of a membrane and which functions as a cargo receptor.","definition_xrefs":["PMID:27903609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cargo receptor complex","termid":"GO:0062137"}


id: GO:0030378
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine = D-serine.","definition_xrefs":["RHEA:10980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"serine racemase activity","secondary_identifiers":["MetaCyc:5.1.1.18-RXN","EC:5.1.1.18","Reactome:R-HSA-9014766"],"termid":"GO:0030378"}


id: PBO:0079812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2AF homology motif kinase 1","termid":"PBO:0079812"}


id: GO:0046800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the severity of viral infection and subsequent disease.","definition_xrefs":["PMID:10587354"],"gene_count":0,"genotype_count":0,"name":"obsolete enhancement of virulence (obsolete GO:0046800)","synonyms":[{"name":"enhancement of virulence","type":"exact"}],"termid":"GO:0046800"}


id: PBO:0084660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial 15S rRNA-binding protein; required for intron removal of COB and COX1 pre-mRNAs; has separable roles in stabilizing mitochondrial 15S rRNA and in maturation of the COB and COX1 mRNAs; contains pentatricopeptide repeat (PPR) motifs; mutant is respiratory deficient and has defective plasma membrane electron transport","termid":"PBO:0084660"}


id: PBO:0044462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 61, pseudogene","termid":"PBO:0044462"}


id: PATO:0001257
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Pink color having high brightness and moderate saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pink","termid":"PATO:0000954"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"light deep pink","termid":"PATO:0001257"}


id: PBO:0040394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit E1 pseudogene 2","termid":"PBO:0040394"}


id: PBO:0004866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine carboxypeptidase (predicted)","termid":"PBO:0004866"}


id: GO:0008247
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex composed of two catalytic alpha subunits, which form a catalytic dimer, and a non-catalytic, regulatory beta subunit; the catalytic dimer may be an alpha1/alpha1 or alpha2/alpha2 homodimer, or an alpha1/alpha2 heterodimer. Modulates the action of platelet-activating factor (PAF).","definition_xrefs":["GOC:jl","PMID:10542206"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"1-alkyl-2-acetylglycerophosphocholine esterase complex","synonyms":[{"name":"2-acetyl-1-alkylglycerophosphocholine esterase complex","type":"exact"},{"name":"platelet-activating factor acetylhydrolase complex","type":"exact"}],"termid":"GO:0008247"}


id: GO:0061250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a mesonephric glomerular epithelial cell. Mesonephric glomerular epithelial cells are specialized epithelial cells that form part of the mesonephric glomerulus; there are two types, mesonephric glomerular parietal epithelial cells and mesonephric glomerular visceral epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in mesonephros development","termid":"GO:0061208"},{"relation_name":"is_a","term_name":"glomerular epithelial cell differentiation","termid":"GO:0072311"},{"relation_name":"part_of","term_name":"mesonephric glomerular epithelium development","termid":"GO:0061232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerular epithelial cell differentiation","termid":"GO:0061250"}


id: MONDO:0009885
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Scott syndrome is an extremely rare congenital hemorrhagic disorder characterized by hemorrhagic episodes due to impaired platelet coagulant activity.","definition_xrefs":["Orphanet:806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Scott syndrome","secondary_identifiers":["icd11.foundation:186013982","SCTID:128098009","GARD:4777","DOID:0111052","MESH:C563120","UMLS:C0796149","OMIM:262890","NANDO:2200671","MEDGEN:167107"],"synonyms":[{"name":"BDPLT7","type":"exact"},{"name":"Platelet factor X receptor deficiency","type":"related"},{"name":"SCTS","type":"exact"},{"name":"Scott syndrome","type":"exact"},{"name":"bleeding Abnormality due to deficiency of Platelet binding of Factor 10","type":"related"},{"name":"bleeding abnormality due to deficiency of platelet biding of factor X","type":"exact"},{"name":"bleeding disorder, Platelet-type, 7","type":"related"},{"name":"familial prothrombin consumption inhibitor","type":"exact"},{"name":"familial prothrombin conversion defect","type":"exact"},{"name":"platelet-type bleeding disorder 7","type":"exact"},{"name":"prothrombin consumption deficiency","type":"exact"},{"name":"prothrombin consumption inhibitor, familial","type":"related"},{"name":"prothrombin conversion defect, familial","type":"related"}],"termid":"MONDO:0009885","xrefs":{"Monarch":{"xref_id":"0009885"}}}


id: PBO:0072114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S14 pseudogene 3","termid":"PBO:0072114"}


id: PBO:0082384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta 4 subunit of the 20S proteasome; localizes to the nucleus throughout the cell cycle","termid":"PBO:0082384"}


id: MOD:01827
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfhydryl hydrogen with a Thermo Scientific cysTMT6plex-130 reporter+balance group.","definition_xrefs":["PubMed:18688235","URL:http://www.piercenet.com/files/2162220.pdf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysTMT6plex reporter+balance reagent cysteine disulfide","termid":"MOD:01821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"cysTMT6plex-130 reporter+balance reagent cysteine disulfide","synonyms":[{"name":"S-(2-{3-[2-(2,6-dimethylpiperidin-1-yl)acetamido]propanamido}ethyl)sulfanyl","type":"exact"},{"name":"cysTMT6plex","type":"related"},{"name":"cysteine-reactive Sixplex Tandem Mass Tag(TM)","type":"related"}],"termid":"MOD:01827"}


id: PBO:0063329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 pseudogene 5","termid":"PBO:0063329"}


id: GO:1901534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hematopoietic progenitor cell differentiation.","definition_xrefs":["GOC:rl","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of hematopoietic progenitor cell differentiation","termid":"GO:1901532"},{"relation_name":"positively_regulates","term_name":"hematopoietic progenitor cell differentiation","termid":"GO:0002244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hematopoietic progenitor cell differentiation","synonyms":[{"name":"activation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"activation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"activation of hematopoietic progenitor cell differentiation","type":"related"},{"name":"activation of hemopoietic progenitor cell differentiation","type":"narrow"},{"name":"positive regulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"positive regulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"positive regulation of hemopoietic progenitor cell differentiation","type":"exact"},{"name":"up regulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"up regulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"up regulation of hematopoietic progenitor cell differentiation","type":"related"},{"name":"up regulation of hemopoietic progenitor cell differentiation","type":"exact"},{"name":"up-regulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"up-regulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"up-regulation of hematopoietic progenitor cell differentiation","type":"related"},{"name":"up-regulation of hemopoietic progenitor cell differentiation","type":"exact"},{"name":"upregulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"upregulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"upregulation of hematopoietic progenitor cell differentiation","type":"related"},{"name":"upregulation of hemopoietic progenitor cell differentiation","type":"exact"}],"termid":"GO:1901534"}


id: PBO:0087783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit VI of cytochrome c oxidase (Complex IV); Complex IV is the terminal member of the mitochondrial inner membrane electron transport chain; expression is regulated by oxygen levels","termid":"PBO:0087783"}


id: PBO:0027940
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_viability_upon_glucose_starvation","termid":"PBO:0027940"}


id: MONDO:0015816
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary cutaneous T-cell lymphoma","termid":"MONDO:0015758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093","MONDO:0005570"],"is_obsolete":false,"name":"indolent primary cutaneous T-cell lymphoma","secondary_identifiers":["GARD:20161","Orphanet:178548","UMLS:C5680498","MEDGEN:1843370"],"termid":"MONDO:0015816","xrefs":{"Monarch":{"xref_id":"0015816"}}}


id: PBO:0035988
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_eMTOC","termid":"PBO:0035988"}


id: GO:0061134
data:
  {"annotated_genes":["SJAG_02625","SJAG_00837","SJAG_01072","SJAG_04633","SJAG_05252","SJAG_04484","SJAG_00591","SJAG_00460","SJAG_04211","SJAG_04505"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75990,79901],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061133"},{"annotations":[67738,105101,63820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004866"},{"annotations":[77033,80801,78675,72566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016504"},{"annotations":[101789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030414"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of a peptidase, any enzyme that catalyzes the hydrolysis peptide bonds.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00460":null,"SJAG_00591":null,"SJAG_00837":null,"SJAG_01072":null,"SJAG_02625":null,"SJAG_04211":null,"SJAG_04484":null,"SJAG_04505":null,"SJAG_04633":null,"SJAG_05252":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"peptidase regulator activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0061134","terms_by_termid":{"GO:0004866":null,"GO:0016504":null,"GO:0030414":null,"GO:0061133":null}}


id: PBO:0042698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chymotrypsin like elastase 3B","termid":"PBO:0042698"}


id: PBO:0055765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA associated with lymph node metastasis in cervical cancer","termid":"PBO:0055765"}


id: SO:0001249
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A fragment assembly is a genome assembly that orders overlapping fragments of the genome based on landmark sequences. The base pair distance between the landmarks is known allowing additivity of lengths.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assembly","termid":"SO:0001248"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragment_assembly","synonyms":[{"name":"fragment assembly","type":"exact"},{"name":"physical map","type":"exact"}],"termid":"SO:0001249"}


id: MONDO:0009094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dermochondrocorneal dystrophy is characterized by osteochondrodystrophy of the hands and feet, corneal dystrophy and the presence of skin nodules clustered around the metacarpophalangeal and interphalangeal joints, around the nose and ears and on the posterior surface of the elbow. Gingival lesions may also be present. It has been described in less than 20 patients. Transmission is autosomal recessive.","definition_xrefs":["Orphanet:79149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dermochondrocorneal dystrophy","secondary_identifiers":["UMLS:C0432288","GARD:1815","MEDGEN:98151","icd11.foundation:1305138145","MESH:C535375","ICD9:379.99","SCTID:254150007","OMIM:221800"],"synonyms":[{"name":"DCCD","type":"related"},{"name":"Dermochondrocorneal dystrophy of François","type":"related"},{"name":"FranC'ois syndrome","type":"exact"},{"name":"Francois syndrome","type":"related"},{"name":"François syndrome","type":"exact"},{"name":"dermochondrocorneal dystrophy","type":"exact"}],"termid":"MONDO:0009094","xrefs":{"Monarch":{"xref_id":"0009094"}}}


id: GO:0009070
data:
  {"annotated_genes":["SJAG_04305","SJAG_02450","SJAG_03152","SJAG_02791","SJAG_03914","SJAG_01880","SJAG_00881","SJAG_02313","SJAG_00234","SJAG_01766","SJAG_00582","SJAG_02972","SJAG_04449"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019344"},{"annotations":[77892,61037,67709],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006535"},{"annotations":[73862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006545"},{"annotations":[75074,73814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019264"},{"annotations":[117644,75345,72884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009090"},{"annotations":[112356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071269"},{"annotations":[81330,118770,61562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006564"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of amino acids of the serine family, comprising cysteine, glycine, homoserine, selenocysteine and serine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine family amino acid metabolic process","termid":"GO:0009069"},{"relation_name":"is_a","term_name":"alpha-amino acid biosynthetic process","termid":"GO:1901607"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00234":null,"SJAG_00582":null,"SJAG_00881":null,"SJAG_01766":null,"SJAG_01880":null,"SJAG_02313":null,"SJAG_02450":null,"SJAG_02791":null,"SJAG_02972":null,"SJAG_03152":null,"SJAG_03914":null,"SJAG_04305":null,"SJAG_04449":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"serine family amino acid biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"serine family amino acid anabolism","type":"exact"},{"name":"serine family amino acid biosynthesis","type":"exact"},{"name":"serine family amino acid formation","type":"exact"},{"name":"serine family amino acid synthesis","type":"exact"}],"termid":"GO:0009070","terms_by_termid":{"GO:0006535":null,"GO:0006545":null,"GO:0006564":null,"GO:0009090":null,"GO:0019264":null,"GO:0019344":null,"GO:0071269":null}}


id: PR:O74306
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl502 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L5-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11C11.09c","synonyms":[{"name":"Spom972h-rpl502","type":"exact"}],"termid":"PR:O74306"}


id: MONDO:0007742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine oxygenase regulator","secondary_identifiers":["MEDGEN:854659","OMIM:143460","UMLS:C3887951"],"synonyms":[{"name":"5-HYDROXYTRYPTAMINE oxygenase regulator","type":"related"},{"name":"5-hydroxytryptamine oxygenase regulator","type":"exact"},{"name":"HTOR","type":"related"}],"termid":"MONDO:0007742","xrefs":{"Monarch":{"xref_id":"0007742"}}}


id: FYPO:0002736
data:
  {"alleles_by_uniquename":{"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"}],"single_locus_phenotype":[{"annotations":[121069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"},{"annotations":[121457,121458,121456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000618"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell does not proceed normally through a specific mitotic cell cycle phase. A mitotic cell cycle phase is any of the distinct periods or stages into which the mitotic cell cycle is divided. Each phase is characterized by the occurrence of specific biochemical and morphological events.","definition_xrefs":["GO:0022403","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle","termid":"FYPO:0000059"},{"relation_name":"is_a","term_name":"abnormal cell cycle phase","termid":"FYPO:0002735"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00871":null,"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null,"SJAG_04284":null,"SJAG_04464":null},"genotype_count":5,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut3-T19E(aa) pim1-R152C(aa)","display_uniquename":"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00871:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_00871","SJAG_04464"],"name":"abnormal mitotic cell cycle phase","references_by_uniquename":{"PMID:23786411":null,"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_03575","SJAG_04284","SJAG_03351","SJAG_01956"],"single_locus_genotype_uniquenames":["nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nup61delta","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"termid":"FYPO:0002736","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000618":null,"FYPO:0000619":null,"FYPO_EXT:0000001":null}}


id: PATO:0002437
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being locked together or interconnected to another entity.","definition_xrefs":["merriam-webster:merriam-webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interlocked with","termid":"PATO:0002437"}


id: FYPO:0005086
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at small nucleolar RNA (snoRNA) genes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:21151114","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin at ncRNA gene","termid":"FYPO:0005083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to chromatin at snoRNA gene","synonyms":[{"name":"normal protein localisation to chromatin at snoRNA gene","type":"exact"},{"name":"normal protein localization to chromatin at snoRNA gene during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at snoRNA gene during vegetative growth","type":"exact"}],"termid":"FYPO:0005086"}


id: PBO:0114390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tectonin WD repeat-containing, dysferlin-like autophagy-related protein Mug65","termid":"PBO:0114390"}


id: GO:0031672
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The dark-staining region of a sarcomere, in which myosin thick filaments are present; the center is traversed by the paler H zone, which in turn contains the M line.","definition_xrefs":["ISBN:0321204131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sarcomere","termid":"GO:0030017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"A band","secondary_identifiers":["Wikipedia:Sarcomere#bands"],"synonyms":[{"name":"A disc","type":"exact"},{"name":"Q disc","type":"exact"},{"name":"anisotropic disc","type":"exact"},{"name":"transverse disc","type":"exact"}],"termid":"GO:0031672"}


id: MONDO:0958275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"spinal cord disorder","termid":"MONDO:0002545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"segmental spinal dysgenesis","secondary_identifiers":["Orphanet:656126","MEDGEN:1863453","UMLS:C5891176"],"termid":"MONDO:0958275","xrefs":{"Monarch":{"xref_id":"0958275"}}}


id: MONDO:1011260
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any achromatopsia that occurs in dogs due to a mutation in the CNGA3 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"achromatopsia, non-human animal","termid":"MONDO:1012578"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"achromatopsia, CNGA3-related, dog","secondary_identifiers":["OMIA:001481-9615"],"synonyms":[{"name":"achromatopsia-2 CNGA3-related, dog","type":"related"},{"name":"canine day blindness","type":"broad"}],"termid":"MONDO:1011260","xrefs":{"Monarch":{"xref_id":"1011260"}}}


id: GO:1900398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of pyrimidine nucleotide biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleotide biosynthetic process","termid":"GO:0030809"},{"relation_name":"is_a","term_name":"regulation of pyrimidine nucleotide biosynthetic process","termid":"GO:1900397"},{"relation_name":"negatively_regulates","term_name":"pyrimidine nucleotide biosynthetic process","termid":"GO:0006221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"negative regulation of pyrimidine nucleotide biosynthetic process","synonyms":[{"name":"down regulation of pyrimidine nucleotide anabolism","type":"exact"},{"name":"down regulation of pyrimidine nucleotide biosynthesis","type":"exact"},{"name":"down regulation of pyrimidine nucleotide biosynthetic process","type":"exact"},{"name":"down regulation of pyrimidine nucleotide formation","type":"exact"},{"name":"down regulation of pyrimidine nucleotide synthesis","type":"exact"},{"name":"down-regulation of pyrimidine nucleotide anabolism","type":"exact"},{"name":"down-regulation of pyrimidine nucleotide biosynthesis","type":"exact"},{"name":"down-regulation of pyrimidine nucleotide biosynthetic process","type":"exact"},{"name":"down-regulation of pyrimidine nucleotide formation","type":"exact"},{"name":"down-regulation of pyrimidine nucleotide synthesis","type":"exact"},{"name":"downregulation of pyrimidine nucleotide anabolism","type":"exact"},{"name":"downregulation of pyrimidine nucleotide biosynthesis","type":"exact"},{"name":"downregulation of pyrimidine nucleotide biosynthetic process","type":"exact"},{"name":"downregulation of pyrimidine nucleotide formation","type":"exact"},{"name":"downregulation of pyrimidine nucleotide synthesis","type":"exact"},{"name":"inhibition of pyrimidine nucleotide anabolism","type":"exact"},{"name":"inhibition of pyrimidine nucleotide biosynthesis","type":"exact"},{"name":"inhibition of pyrimidine nucleotide biosynthetic process","type":"narrow"},{"name":"inhibition of pyrimidine nucleotide formation","type":"exact"},{"name":"inhibition of pyrimidine nucleotide synthesis","type":"exact"},{"name":"negative regulation of pyrimidine nucleotide anabolism","type":"exact"},{"name":"negative regulation of pyrimidine nucleotide biosynthesis","type":"exact"},{"name":"negative regulation of pyrimidine nucleotide formation","type":"exact"},{"name":"negative regulation of pyrimidine nucleotide synthesis","type":"exact"}],"termid":"GO:1900398"}


id: PBO:0044425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 3 subfamily A member 51, pseudogene","termid":"PBO:0044425"}


id: PBO:0085768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase related to mammalian GSK-3 glycogen synthase kinases; GSK-3 homologs (Mck1p, Rim11p, Mrk1p, Ygk3p) are involved in control of Msn2p-dependent transcription of stress responsive genes and in protein degradation; YGK3 has a paralog, MCK1, that arose from the whole genome duplication","termid":"PBO:0085768"}


id: PBO:0079191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 20, pseudogene","termid":"PBO:0079191"}


id: PBO:0054688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2097","termid":"PBO:0054688"}


id: PR:O14097
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- saf2 gene.","definition_xrefs":["UniProtKB:O14097","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain-containing protein C2F3.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.14c","synonyms":[{"name":"Spom972h-saf2","type":"exact"}],"termid":"PR:O14097"}


id: GO:0090013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of any TGF-beta receptor signaling pathway that contributes to the formation of the primitive streak.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transforming growth factor beta receptor signaling pathway involved in primitive streak formation (obsolete GO:0090013)","synonyms":[{"name":"regulation of transforming growth factor beta receptor signalling pathway involved in primitive streak formation","type":"exact"}],"termid":"GO:0090013"}


id: PBO:0005725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2C Ptc1","termid":"PBO:0005725"}


id: PBO:0076957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming growth factor beta induced","termid":"PBO:0076957"}


id: PBO:0002321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta small subunit Cdc1","termid":"PBO:0002321"}


id: GO:0103086
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-(5'-methylthio)pentylmalate = 3-(5'-methylthio)pentylmalate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete methylthiopentylmalate isomerase activity (obsolete GO:0103086)","termid":"GO:0103086"}


id: GO:0035565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the size of a pronephric kidney.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of kidney size","termid":"GO:0035564"},{"relation_name":"part_of","term_name":"pronephros morphogenesis","termid":"GO:0072114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pronephros size","synonyms":[{"name":"regulation of pronephric kidney size","type":"exact"}],"termid":"GO:0035565"}


id: PBO:0070432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome production factor 2 homolog pseudogene 2","termid":"PBO:0070432"}


id: PBO:0080580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDR5 divergent transcript","termid":"PBO:0080580"}


id: PBO:0117066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUP214 antisense RNA 1","termid":"PBO:0117066"}


id: PBO:0025506
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphofructokinase deficiency","termid":"PBO:0025506"}


id: PBO:0045342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"docking protein 2","termid":"PBO:0045342"}


id: MONDO:0006218
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplastic, non-invasive lesion that affects the gallbladder epithelium. It is characterized by the presence of atypical epithelial cells with an increased nuclear/cytoplasmic ratio, nuclear hyperchromasia, and loss of nuclear polarity.","definition_xrefs":["NCIT:C43606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gallbladder neoplasm","termid":"MONDO:0021253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"gallbladder biliary intraepithelial neoplasia","secondary_identifiers":["UMLS:C1708174","EFO:1000265","MEDGEN:317714"],"synonyms":[{"name":"gallbladder BilIN","type":"exact"},{"name":"gallbladder biliary intraepithelial neoplasia","type":"exact"},{"name":"gallbladder dysplasia","type":"exact"},{"name":"gallbladder intraepithelial neoplasia","type":"exact"},{"name":"intracystic BilIN","type":"exact"},{"name":"intracystic biliary intraepithelial neoplasia","type":"exact"}],"termid":"MONDO:0006218","xrefs":{"Monarch":{"xref_id":"0006218"}}}


id: PBO:0078135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 14/delta variable 4","termid":"PBO:0078135"}


id: FYPO:0003904
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the plasma membrane is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal plasma membrane morphology","synonyms":[{"name":"normal plasma membrane morphology during mitotic cell cycle","type":"related"},{"name":"normal plasma membrane morphology during vegetative growth","type":"exact"}],"termid":"FYPO:0003904"}


id: PBO:0039207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member B10 pseudogene 1","termid":"PBO:0039207"}


id: GO:0030835
data:
  {"annotated_genes":["SJAG_01993","SJAG_01894","SJAG_02700","SJAG_00279"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81936,80885,77285,94137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of actin depolymerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament depolymerization","termid":"GO:0030834"},{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"is_a","term_name":"negative regulation of protein depolymerization","termid":"GO:1901880"},{"relation_name":"is_a","term_name":"negative regulation of supramolecular fiber organization","termid":"GO:1902904"},{"relation_name":"negatively_regulates","term_name":"actin filament depolymerization","termid":"GO:0030042"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"negative regulation of actin filament depolymerization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0030044"],"synonyms":[{"name":"actin filament stabilization","type":"exact"},{"name":"down regulation of actin filament depolymerization","type":"exact"},{"name":"down-regulation of actin filament depolymerization","type":"exact"},{"name":"downregulation of actin filament depolymerization","type":"exact"},{"name":"inhibition of actin filament depolymerization","type":"narrow"},{"name":"negative regulation of actin depolymerization","type":"exact"},{"name":"negative regulation of actin polymerization and/or depolymerization","type":"broad"}],"termid":"GO:0030835","terms_by_termid":{"GO:0051016":null}}


id: PBO:0026906
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_swollen_binucleate_multiseptate_cell_with_central_constriction","termid":"PBO:0026906"}


id: PBO:0069140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 391, pseudogene","termid":"PBO:0069140"}


id: MONDO:0014090
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"postaxial polydactyly type A","termid":"MONDO:0019673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly, postaxial, type A6","secondary_identifiers":["OMIM:615226","GARD:18176","UMLS:C3808889","MEDGEN:815219"],"synonyms":[{"name":"PAPA6","type":"related"},{"name":"polydactyly, postaxial, type A6","type":"exact"}],"termid":"MONDO:0014090","xrefs":{"Monarch":{"xref_id":"0014090"}}}


id: PBO:0071560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 26","termid":"PBO:0071560"}


id: PBO:0055278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2705","termid":"PBO:0055278"}


id: PBO:0077499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 217B","termid":"PBO:0077499"}


id: GO:0009811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of stilbenes, a class of polyketide compounds formed from cinnamic acid and three molecules of malonyl CoA.","definition_xrefs":["ISBN:3110116251","GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stilbene metabolic process","termid":"GO:0009810"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stilbene biosynthetic process","synonyms":[{"name":"stilbene anabolism","type":"exact"},{"name":"stilbene biosynthesis","type":"exact"},{"name":"stilbene formation","type":"exact"},{"name":"stilbene synthesis","type":"exact"}],"termid":"GO:0009811"}


id: PBO:0062268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily G member 4 pseudogene","termid":"PBO:0062268"}


id: FYPO:0008146
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121431,121433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"},{"annotations":[121434,121432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004573"}],"single_locus_phenotype":[{"annotations":[121419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of non-coding RNA transcribed measured in a cell is higher than normal.","definition_xrefs":["PMID:25989903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03689","SJAG_02621","SJAG_03118"],"name":"increased ncRNA level during vegetative growth","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"termid":"FYPO:0008146","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0004573":null,"FYPO:0004982":null}}


id: GO:0140139
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The solid compartment of the basement membrane ECM, including a specific subset of basement membrane collagens and basement membrane glycoproteins like laminins or nidogens.","definition_xrefs":["PMID:33972551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external encapsulating structure","termid":"GO:0030312"},{"relation_name":"part_of","term_name":"basement membrane","termid":"GO:0005604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"solid phase of basement membrane","termid":"GO:0140139"}


id: GO:0030620
data:
  {"annotated_genes":["SJAG_02185","SJAG_03954","SJAG_04497","SJAG_02469","SJAG_05240","SJAG_03210","SJAG_03070","SJAG_01819","SJAG_03460","SJAG_03547","SJAG_01327"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75932,77787,79116,97643,108181,110381,114513,114748,116802,117734,118267],"is_not":false,"summary":null,"term":"GO:0030620"}]},"cv_name":"molecular_function","definition":"Binding to a U2 small nuclear RNA (U2 snRNA).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"}],"gene_count":11,"genes_by_uniquename":{"SJAG_01327":null,"SJAG_01819":null,"SJAG_02185":null,"SJAG_02469":null,"SJAG_03070":null,"SJAG_03210":null,"SJAG_03460":null,"SJAG_03547":null,"SJAG_03954":null,"SJAG_04497":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"U2 snRNA binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030620","terms_by_termid":{"GO:0030620":null}}


id: GO:0035824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A gene conversion process in which a segment of more than 1000 base pairs is transferred from the donor to the acceptor.","definition_xrefs":["PMID:16954385","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene conversion","termid":"GO:0035822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"long tract gene conversion","termid":"GO:0035824"}


id: GO:0004092
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + carnitine = (R)-O-acetylcarnitine + CoA.","definition_xrefs":["RHEA:21136","EC:2.3.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carnitine O-acyltransferase activity","termid":"GO:0016406"},{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"carnitine O-acetyltransferase activity","secondary_identifiers":["Reactome:R-HSA-390284","KEGG_REACTION:R02396","MetaCyc:CARNITINE-O-ACETYLTRANSFERASE-RXN","Reactome:R-HSA-390291","GO:0004093","GO:0004094"],"synonyms":[{"name":"CATC","type":"related"},{"name":"acetyl-CoA-carnitine O-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:carnitine O-acetyltransferase activity","type":"related"},{"name":"acetylcarnitine transferase activity","type":"related"},{"name":"carnitine O-acetyltransferase I activity","type":"narrow"},{"name":"carnitine O-acetyltransferase II activity","type":"narrow"},{"name":"carnitine acetyl coenzyme A transferase activity","type":"related"},{"name":"carnitine acetylase activity","type":"related"},{"name":"carnitine acetyltransferase activity","type":"related"},{"name":"carnitine-acetyl-CoA transferase activity","type":"related"}],"termid":"GO:0004092"}


id: MONDO:0020084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lymphoproliferative disease associated with primary immune disease (obsolete MONDO:0020084)","secondary_identifiers":["Orphanet:98291"],"termid":"MONDO:0020084","xrefs":{"Monarch":{"xref_id":"0020084"}}}


id: SO:0000256
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has an asparagine anticodon, and a 3' asparagine binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"asparagine_tRNA_primary_transcript","termid":"SO:0000213"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparaginyl_tRNA","synonyms":[{"name":"asparaginyl tRNA","type":"exact"},{"name":"asparaginyl-transfer RNA","type":"exact"},{"name":"asparaginyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000256"}


id: PBO:0074948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 111B","termid":"PBO:0074948"}


id: PBO:0059395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S28","termid":"PBO:0059395"}


id: PBO:0016914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-UTP complex subint Utp8 (predicted)","termid":"PBO:0016914"}


id: PBO:0064775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphosphoinositol pentakisphosphate kinase 1","termid":"PBO:0064775"}


id: PBO:0070009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1306, pseudogene","termid":"PBO:0070009"}


id: PBO:0088071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-specific protease; specifically disassembles unanchored ubiquitin chains; involved in fructose-1,6-bisphosphatase (Fbp1p) degradation; similar to human isopeptidase T","termid":"PBO:0088071"}


id: PBO:0110348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENATAC pseudogene 1","termid":"PBO:0110348"}


id: PBO:0004100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucanosyltransferase Gas2 (predicted)","termid":"PBO:0004100"}


id: MONDO:0009171
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelial dystrophy, congenital hereditary, with nail hypoplasia","secondary_identifiers":["UMLS:C1856970","MESH:C565591","MEDGEN:341664","OMIM:226110"],"synonyms":[{"name":"endothelial dystrophy, congenital hereditary, with nail hypoplasia","type":"exact"}],"termid":"MONDO:0009171","xrefs":{"Monarch":{"xref_id":"0009171"}}}


id: FYPO:0002636
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic spindle elongation begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle elongation","termid":"FYPO:0000131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000641","FYPO:0000002","FYPO:0000631","FYPO:0000054","FYPO:0005447","FYPO:0001320","FYPO:0000337"],"is_obsolete":false,"name":"delayed onset of mitotic spindle elongation","synonyms":[{"name":"delayed mitotic spindle elongation","type":"exact"},{"name":"delayed onset of mitotic spindle elongation during vegetative growth","type":"exact"},{"name":"delayed onset of spindle elongation during mitotic cell cycle","type":"related"},{"name":"mitotic spindle elongation delayed","type":"exact"}],"termid":"FYPO:0002636"}


id: GO:0103068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: leukotriene C4 + a standard alpha amino acid = leukotriene D4 + an (gamma-L-glutamyl)-L-amino acid.","definition_xrefs":["GOC:pz","PMID:9139674","PMID:1676842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"leukotriene C4 gamma-glutamyl transferase activity","secondary_identifiers":["EC:2.3.2.2","MetaCyc:RXN66-336"],"termid":"GO:0103068"}


id: GO:1902742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that is involved in anatomical structure development.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","GOC:mtg_apoptosis","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"},{"relation_name":"part_of","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in development","synonyms":[{"name":"activation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"activation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"apoptosis activator activity involved in anatomical structure development","type":"related"},{"name":"apoptosis activator activity involved in development of an anatomical structure","type":"related"},{"name":"apoptosis involved in anatomical structure development","type":"narrow"},{"name":"apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"apoptosis signaling involved in anatomical structure development","type":"narrow"},{"name":"apoptosis signaling involved in development of an anatomical structure","type":"narrow"},{"name":"apoptotic cell death involved in anatomical structure development","type":"exact"},{"name":"apoptotic cell death involved in development of an anatomical structure","type":"exact"},{"name":"apoptotic process involved in anatomical structure development","type":"exact"},{"name":"apoptotic process involved in development of an anatomical structure","type":"exact"},{"name":"apoptotic program involved in anatomical structure development","type":"narrow"},{"name":"apoptotic program involved in development of an anatomical structure","type":"narrow"},{"name":"apoptotic programmed cell death involved in anatomical structure development","type":"exact"},{"name":"apoptotic programmed cell death involved in development of an anatomical structure","type":"exact"},{"name":"commitment to apoptosis involved in anatomical structure development","type":"related"},{"name":"commitment to apoptosis involved in development of an anatomical structure","type":"related"},{"name":"induction of apoptosis by p53 involved in anatomical structure development","type":"related"},{"name":"induction of apoptosis by p53 involved in development of an anatomical structure","type":"related"},{"name":"induction of apoptosis involved in anatomical structure development","type":"related"},{"name":"induction of apoptosis involved in development of an anatomical structure","type":"related"},{"name":"programmed cell death by apoptosis involved in anatomical structure development","type":"exact"},{"name":"programmed cell death by apoptosis involved in development of an anatomical structure","type":"exact"},{"name":"signaling (initiator) caspase activity involved in anatomical structure development","type":"related"},{"name":"signaling (initiator) caspase activity involved in development of an anatomical structure","type":"related"},{"name":"type I programmed cell death involved in anatomical structure development","type":"narrow"},{"name":"type I programmed cell death involved in development of an anatomical structure","type":"narrow"}],"termid":"GO:1902742"}


id: FYPO:0007246
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body is abolished during anaphase of the second meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:20980623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to meiotic spindle pole body","termid":"FYPO:0003542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000054","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abolished protein localization to meiotic spindle pole body during anaphase II","synonyms":[{"name":"abolished protein localisation to meiotic spindle pole body during anaphase II","type":"exact"},{"name":"abolished protein localization to meiotic SPB during anaphase II","type":"exact"},{"name":"protein localization to meiotic spindle pole body abolished during anaphase II","type":"exact"}],"termid":"FYPO:0007246"}


id: PBO:0003671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tricarboxylic acid transporter (predicted)","termid":"PBO:0003671"}


id: PBO:0064499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit C","termid":"PBO:0064499"}


id: MONDO:0100079
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the SCN1A gene.","definition_xrefs":["OMIM:607208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genetic developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 6A","synonyms":[{"name":"DEE6A","type":"exact"},{"name":"Dravet syndrome","type":"related"},{"name":"EIEE6","type":"exact"},{"name":"developmental and epileptic encephalopathy, 6A","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 6","type":"exact"}],"termid":"MONDO:0100079","xrefs":{"Monarch":{"xref_id":"0100079"}}}


id: _global:participates_in
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"a relation between a continuant and a process, in which the continuant is somehow involved in the process","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"participates_in","secondary_identifiers":["RO:0000056"],"termid":"_global:participates_in"}


id: PR:000036978
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the ras1 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras-like protein 1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC17H9.09c","synonyms":[{"name":"SPAC17H9.09c","type":"related"},{"name":"Spom-ras1","type":"exact"}],"termid":"PR:000036978"}


id: PBO:0088686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATOR1-SEACIT GTPase complex subunit Iml1","termid":"PBO:0088686"}


id: PBO:0044059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin D","termid":"PBO:0044059"}


id: GO:0003133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from endodermal cells to mesodermal cells.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"endodermal-mesodermal cell signaling","synonyms":[{"name":"endodermal-mesodermal cell signalling","type":"exact"}],"termid":"GO:0003133"}


id: PBO:0068433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 3","termid":"PBO:0068433"}


id: MONDO:0018619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hyperinsulinemic hypoglycaemia (obsolete MONDO:0018619)","termid":"MONDO:0018619","xrefs":{"Monarch":{"xref_id":"0018619"}}}


id: MONDO:0001034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal ulcer","termid":"MONDO:0004577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"marginal corneal ulcer","secondary_identifiers":["icd11.foundation:2035123281","ICD9:370.01","MEDGEN:509765","SCTID:47398006","DOID:10441","UMLS:C0155067","ICD10CM:H16.04"],"termid":"MONDO:0001034","xrefs":{"Monarch":{"xref_id":"0001034"}}}


id: GO:0032331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of chondrocyte differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chondrocyte differentiation","termid":"GO:0032330"},{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"negative regulation of cartilage development","termid":"GO:0061037"},{"relation_name":"negatively_regulates","term_name":"chondrocyte differentiation","termid":"GO:0002062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of chondrocyte differentiation","synonyms":[{"name":"down regulation of chondrocyte differentiation","type":"exact"},{"name":"down-regulation of chondrocyte differentiation","type":"exact"},{"name":"downregulation of chondrocyte differentiation","type":"exact"},{"name":"inhibition of chondrocyte differentiation","type":"narrow"}],"termid":"GO:0032331"}


id: PBO:0039572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 66","termid":"PBO:0039572"}


id: PBO:0051722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin receptor","termid":"PBO:0051722"}


id: GO:0120171
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex that forms at the cell cortex in response to pheromone treatment and is required for the polarized growth of haploid yeast cells towards a mating partner during yeast mating. In the yeast Saccharomyces cerevisiae, this complex consists of Cdc24p, Far1p, Ste4p (G-protein beta subunit) and Ste18p (G-protein gamma subunit).","definition_xrefs":["PMID:10087263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Cdc24p-Far1p-Gbetagamma complex","synonyms":[{"name":"CDC24-FAR1-BG complex","type":"exact"},{"name":"CDC24-FAR1-Gbetagamma complex","type":"exact"},{"name":"Cdc24p-Far1p-BG complex","type":"exact"}],"termid":"GO:0120171"}


id: PBO:0047427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc epsilon receptor Ig","termid":"PBO:0047427"}


id: MONDO:0019634
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial nasal acilia is a rare genetic otorhinolaryngologic disease characterized by respiratory morbidity due to lack of cilia on the respiratory tract epithelial cells. The disease manifests from birth with respiratory distress, neonatal pneumonia, dyspnea, lobar atelectasis and bronchiectasis. Recurrent infections of the upper and lower respiratory tract, chronic humid coughing, and chronic sinusitis, otitis and rhinitis are typical lifelong presenting conditions.","definition_xrefs":["Orphanet:922"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary otorhinolaryngologic disease","termid":"MONDO:0018751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial nasal acilia","secondary_identifiers":["UMLS:C4706505","MEDGEN:1647725","GARD:2254","SCTID:763532008"],"termid":"MONDO:0019634","xrefs":{"Monarch":{"xref_id":"0019634"}}}


id: SO:0002286
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Tyrosine Kinase (YR) retrotransposons are a subclass of non-LTR retrotransposons. These YR-encoding elements consist of central gag, pol and tyrosine recombinase (YR) open reading frames (ORFs) flanked with terminal repeat. The pol ORF includes a reverse transcriptase (RT), a RNase H (RH) and, in case of DIRS, a domain similar to bacterial and phage DNA N-6-adenine-methyltransferase (MT). Compared to the retroviral pol (LTR retrotransposons, non-LTR retrotransposons and Penelope elements), both aspartic protease and DDE integrase are absent from YR retrotransposons. YR retrotransposons have inverted terminal repeats (ITRs).","definition_xrefs":["PMID:24086727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non_LTR_retrotransposon","termid":"SO:0000189"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YR_retrotransposon","synonyms":[{"name":"YR retrotransposon","type":"exact"},{"name":"tyrosine kinase retrotransposon","type":"exact"}],"termid":"SO:0002286"}


id: PBO:0077674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 21","termid":"PBO:0077674"}


id: GO:0160096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the nematode pharyngeal muscle over time, from its formation to the mature structure.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle organ development","termid":"GO:0007517"},{"relation_name":"part_of","term_name":"nematode pharynx development","termid":"GO:0160094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nematode pharyngeal muscle development","termid":"GO:0160096"}


id: PBO:0075574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindlin family member 3","termid":"PBO:0075574"}


id: PBO:0063337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferating cell nuclear antigen pseudogene 2","termid":"PBO:0063337"}


id: GO:0032490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a molecule of bacterial origin is received and converted into a molecular signal.","definition_xrefs":["GOC:rl","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to molecule of bacterial origin","termid":"GO:0002237"},{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"is_a","term_name":"detection of external biotic stimulus","termid":"GO:0098581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of molecule of bacterial origin","synonyms":[{"name":"detection of bacteria associated molecule","type":"exact"},{"name":"detection of bacterial associated molecule","type":"exact"},{"name":"detection of bacterium associated molecule","type":"exact"}],"termid":"GO:0032490"}


id: PBO:0039800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amphiregulin","termid":"PBO:0039800"}


id: GO:1903582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of basophil degranulation.","definition_xrefs":["GO_REF:0000058","PMID:10880837","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myeloid leukocyte mediated immunity","termid":"GO:0002887"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte degranulation","termid":"GO:0043301"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"is_a","term_name":"regulation of basophil degranulation","termid":"GO:1903581"},{"relation_name":"negatively_regulates","term_name":"basophil degranulation","termid":"GO:0002561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of basophil degranulation","synonyms":[{"name":"down regulation of basophil degranulation","type":"exact"},{"name":"down-regulation of basophil degranulation","type":"exact"},{"name":"downregulation of basophil degranulation","type":"exact"},{"name":"inhibition of basophil degranulation","type":"narrow"}],"termid":"GO:1903582"}


id: GO:0150076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The immediate defensive reaction by neural vertebrate tissue to infection or injury caused by chemical or physical agents.","definition_xrefs":["PMID:10981966","PMID:18164423","PMID:11099416","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory response","termid":"GO:0006954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroinflammatory response","synonyms":[{"name":"nerve tissue inflammatory response","type":"exact"},{"name":"nervous tissue inflammatory response","type":"exact"},{"name":"neural tissue inflammatory response","type":"exact"}],"termid":"GO:0150076"}


id: GO:0120296
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dopamine + L-glutaminyl-[protein] = 5-dopaminyl-L-glutamyl-[protein] + NH4(+).","definition_xrefs":["GOC:sp","PMID:22858378","PMID:32273471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"peptide dopaminyltransferase activity","secondary_identifiers":["RHEA:66556"],"termid":"GO:0120296"}


id: GO:0018729
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + propanoate = acetate + propanoyl-CoA.","definition_xrefs":["EC:2.8.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016782","GO:0003674"],"is_obsolete":false,"name":"propionate CoA-transferase activity","secondary_identifiers":["RHEA:23520","MetaCyc:PROPIONATE-COA-TRANSFERASE-RXN","UM-BBD_reactionID:r0087"],"synonyms":[{"name":"acetyl-CoA:propanoate CoA-transferase activity","type":"related"},{"name":"propionate coenzyme A-transferase activity","type":"related"},{"name":"propionate-CoA:lactoyl-CoA transferase activity","type":"related"},{"name":"propionyl CoA:acetate CoA transferase activity","type":"related"},{"name":"propionyl-CoA transferase activity","type":"related"}],"termid":"GO:0018729"}


id: PBO:0088745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc chaperone Zng1","termid":"PBO:0088745"}


id: GO:0016899
data:
  {"annotated_genes":["SJAG_00265"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003885"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces an oxygen molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:1.1.3.-"],"termid":"GO:0016899","terms_by_termid":{"GO:0003885":null}}


id: PBO:0046529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum protein 29","termid":"PBO:0046529"}


id: GO:1901579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of alkane biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"positively_regulates","term_name":"alkane biosynthetic process","termid":"GO:0043447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of alkane biosynthetic process","synonyms":[{"name":"activation of alkane anabolism","type":"exact"},{"name":"activation of alkane biosynthesis","type":"exact"},{"name":"activation of alkane biosynthetic process","type":"narrow"},{"name":"activation of alkane formation","type":"exact"},{"name":"activation of alkane synthesis","type":"exact"},{"name":"positive regulation of alkane anabolism","type":"exact"},{"name":"positive regulation of alkane biosynthesis","type":"exact"},{"name":"positive regulation of alkane formation","type":"exact"},{"name":"positive regulation of alkane synthesis","type":"exact"},{"name":"up regulation of alkane anabolism","type":"exact"},{"name":"up regulation of alkane biosynthesis","type":"exact"},{"name":"up regulation of alkane biosynthetic process","type":"exact"},{"name":"up regulation of alkane formation","type":"exact"},{"name":"up regulation of alkane synthesis","type":"exact"},{"name":"up-regulation of alkane anabolism","type":"exact"},{"name":"up-regulation of alkane biosynthesis","type":"exact"},{"name":"up-regulation of alkane biosynthetic process","type":"exact"},{"name":"up-regulation of alkane formation","type":"exact"},{"name":"up-regulation of alkane synthesis","type":"exact"},{"name":"upregulation of alkane anabolism","type":"exact"},{"name":"upregulation of alkane biosynthesis","type":"exact"},{"name":"upregulation of alkane biosynthetic process","type":"exact"},{"name":"upregulation of alkane formation","type":"exact"},{"name":"upregulation of alkane synthesis","type":"exact"}],"termid":"GO:1901579"}


id: GO:1900411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of histone acetylation.","definition_xrefs":["GOC:mah","GOC:TermGenie","PMID:15218150"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone acetylation by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900411)","termid":"GO:1900411"}


id: PATO:0002395
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being positioned away from the axis of an organism.","definition_xrefs":["PATOC:EH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalised","termid":"PATO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mislocalized abaxially","termid":"PATO:0002395"}


id: GO:0050135
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + H2O = ADP-D-ribose 2'-phosphate + nicotinamide + H+.","definition_xrefs":["RHEA:19849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"NADP+ nucleosidase activity","synonyms":[{"name":"NAD(P)+ nucleosidase activity","type":"broad"},{"name":"NADP nucleosidase activity","type":"exact"},{"name":"NADP(+) nucleosidase activity","type":"exact"},{"name":"NADP+ glycohydrolase activity","type":"related"},{"name":"NADPase activity","type":"related"}],"termid":"GO:0050135"}


id: GO:0002084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of palymitoyl groups from a lipoprotein.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deacylation","termid":"GO:0035601"},{"relation_name":"is_a","term_name":"lipoprotein catabolic process","termid":"GO:0042159"},{"relation_name":"is_a","term_name":"macromolecule depalmitoylation","termid":"GO:0098734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"protein depalmitoylation","termid":"GO:0002084"}


id: PBO:0028300
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_cell_cycle_DNA_replication_checkpoint","termid":"PBO:0028300"}


id: PBO:0080895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YTHDF3 divergent transcript","termid":"PBO:0080895"}


id: PBO:0090934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-A, phosphatidylinositol N-acetylglucosaminyltransferase subunit Gpi3","termid":"PBO:0090934"}


id: PBO:0043807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase N subunit 1","termid":"PBO:0043807"}


id: PR:Q10086
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- toe4 gene.","definition_xrefs":["UniProtKB:Q10086","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C11D3.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.07c","synonyms":[{"name":"Spom972h-toe4","type":"exact"}],"termid":"PR:Q10086"}


id: GO:0141003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a phosphate group to a histone variant H2AX.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone kinase activity","termid":"GO:0035173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0016301","GO:0004672","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"histone H2AX kinase activity","termid":"GO:0141003"}


id: GO:0014711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of branchiomeric skeletal muscle development. Branchiomeric skeletal muscle development is the process whose specific outcome is the progression of the branchiomeric skeletal muscle over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle tissue development","termid":"GO:0048641"},{"relation_name":"regulates","term_name":"branchiomeric skeletal muscle development","termid":"GO:0014707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of branchiomeric skeletal muscle development","termid":"GO:0014711"}


id: PBO:0072484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 13","termid":"PBO:0072484"}


id: GO:0100015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates inositol biosynthetic process.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of inositol biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100015)","termid":"GO:0100015"}


id: PBO:0001016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein Pdr13 (predicted)","termid":"PBO:0001016"}


id: PBO:0074206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 14","termid":"PBO:0074206"}


id: MONDO:0023011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wilson-Mikity syndrome","secondary_identifiers":["MEDGEN:78714","SCTID:51577008","icd11.foundation:846899990","UMLS:C0270171","GARD:10495","ICD10CM:P27.0"],"synonyms":[{"name":"Pulmonary dysmaturity","type":"related"},{"name":"Pulmonary dysmaturity syndrome","type":"related"},{"name":"Wilson-Mikity syndrome","type":"exact"},{"name":"pulmonary dysmaturity","type":"related"},{"name":"wilson-mikity syndrome","type":"exact"}],"termid":"MONDO:0023011","xrefs":{"Monarch":{"xref_id":"0023011"}}}


id: PBO:0073877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 10 member 5","termid":"PBO:0073877"}


id: PATO:0000559
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000559 absolute size value (obsolete PATO:0000559)","termid":"PATO:0000559"}


id: PBO:0090312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Ddx27/Drs1","termid":"PBO:0090312"}


id: PBO:0067525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 668, pseudogene","termid":"PBO:0067525"}


id: GO:0102193
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + a [protein]-N6-D-ribulosyl-L-lysine = ADP + a [protein]-N6-(3-O-phospho-D-ribulosyl)-L-lysine.","definition_xrefs":["GOC:pz","EC:2.7.1.172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"protein-ribulosamine 3-kinase activity","secondary_identifiers":["MetaCyc:RXN-12003","RHEA:48432"],"termid":"GO:0102193"}


id: PR:O14200
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pxa1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PXA domain protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5D6.07c","synonyms":[{"name":"Spom972h-pxa1","type":"exact"}],"termid":"PR:O14200"}


id: PBO:0001488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory complex assembly protein (predicted)","termid":"PBO:0001488"}


id: PBO:0074469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermine synthase","termid":"PBO:0074469"}


id: MOD:01896
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by trifluoroacetic acid forming an adduct, either a salt or a hydrogen bonded carboxylic acid dimer, with an amino acid residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorinated residue","termid":"MOD:00498"},{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trifluoroacetic acid adduct","synonyms":[{"name":"TFA","type":"exact"}],"termid":"MOD:01896"}


id: PBO:0052096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch repeat and BTB domain containing 13","termid":"PBO:0052096"}


id: PBO:0063574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PER3 pseudogene 1","termid":"PBO:0063574"}


id: FYPO:0008182
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which binding by a gene product to the Spt5 CTD domain is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"decreased Spt5-CTD binding","termid":"FYPO:0008182"}


id: FYPO:0005700
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the equatorial microtubule organizing center (eMTOC) does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000934"},{"relation_name":"is_a","term_name":"abolished protein localization to cell division site","termid":"FYPO:0001880"},{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule organizing center","termid":"FYPO:0005702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to eMTOC","synonyms":[{"name":"abolished protein localisation to eMTOC","type":"exact"},{"name":"abolished protein localization to eMTOC during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to eMTOC during vegetative growth","type":"exact"},{"name":"abolished protein localization to equatorial microtubule organizing center","type":"exact"},{"name":"protein absent from eMTOC","type":"related"},{"name":"protein localization to eMTOC abolished","type":"exact"}],"termid":"FYPO:0005700"}


id: GO:0019576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of fructose that occurs in the presence of oxygen.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete aerobic fructose catabolic process (obsolete GO:0019576)","synonyms":[{"name":"aerobic fructose breakdown","type":"exact"},{"name":"aerobic fructose catabolism","type":"exact"},{"name":"aerobic fructose degradation","type":"exact"}],"termid":"GO:0019576"}


id: PBO:0059166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPV17 mitochondrial inner membrane protein like","termid":"PBO:0059166"}


id: MONDO:1010957
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary nonpolyposis colonic adenocarcinoma in Rhesus monkey due to a variation in the MLH1 gene.","definition_xrefs":["OMIA:002145-9544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma, non-human animal","termid":"MONDO:0700099"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal cancer, MLH1-related, Rhesus monkey","termid":"MONDO:1010957","xrefs":{"Monarch":{"xref_id":"1010957"}}}


id: GO:0045724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the formation of a cilium.","definition_xrefs":["GOC:go_curators","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120034"},{"relation_name":"is_a","term_name":"regulation of cilium assembly","termid":"GO:1902017"},{"relation_name":"is_a","term_name":"positive regulation of organelle assembly","termid":"GO:1902117"},{"relation_name":"positively_regulates","term_name":"cilium assembly","termid":"GO:0060271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cilium assembly","synonyms":[{"name":"activation of cilium assembly","type":"narrow"},{"name":"positive regulation of flagellum assembly","type":"broad"},{"name":"positive regulation of flagellum biogenesis","type":"related"},{"name":"stimulation of cilium assembly","type":"narrow"},{"name":"up regulation of cilium assembly","type":"exact"},{"name":"up-regulation of cilium assembly","type":"exact"},{"name":"upregulation of cilium assembly","type":"exact"}],"termid":"GO:0045724"}


id: MOD:00267
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively dioxygenates an L-cysteine residue to L-cysteine sulfinic acid.","definition_xrefs":["Unimod:425#C","PubMed:12686488","ChEBI:16345","OMSSA:162","PubMed:9252331","RESID:AA0262","PubMed:9586994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur oxygenated L-cysteine","termid":"MOD:00708"},{"relation_name":"is_a","term_name":"sulfur dioxygenated residue","termid":"MOD:01855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteine sulfinic acid","synonyms":[{"name":"(2R)-2-amino-3-sulfinopropanoic acid","type":"exact"},{"name":"2-amino-2-carboxyethanesulfinic acid","type":"exact"},{"name":"2-amino-3-(dioxido-lambda(6)-sulfanyl)propanoic acid [tautomer]","type":"exact"},{"name":"2-amino-3-sulfonylpropanoic acid [tautomer]","type":"exact"},{"name":"3-sulfinoalanine","type":"exact"},{"name":"3-sulphinoalanine","type":"exact"},{"name":"CysO2H","type":"exact"},{"name":"Dioxidation","type":"related"},{"name":"L-cysteine sulfinic acid","type":"exact"},{"name":"MOD_RES Cysteine sulfinic acid (-SO2H)","type":"exact"},{"name":"S-cysteinesulfinic acid","type":"exact"},{"name":"S-sulfinocysteine","type":"exact"},{"name":"cysteine sulphinic acid","type":"exact"},{"name":"cysteine-S,S-dioxide [tautomer]","type":"exact"},{"name":"dihydroxy","type":"related"},{"name":"sulfinicacid","type":"exact"}],"termid":"MOD:00267"}


id: MONDO:0014518
data:
  {"annotated_genes":["SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88518],"is_not":false,"summary":null,"term":"MONDO:0014518"}]},"cv_name":"mondo","definition":"Any isolated hereditary giant platelet disorder in which the cause of the disease is a mutation in the PRKACG gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"platelet-type bleeding disorder 19","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17738","Orphanet:438207","DOID:0111048","MEDGEN:863842","UMLS:C4015405","OMIM:616176"],"synonyms":[{"name":"BDPLT19","type":"exact"},{"name":"PRKACG isolated hereditary giant platelet disorder","type":"exact"},{"name":"bleeding disorder, platelet-type, 19","type":"related"},{"name":"isolated hereditary giant platelet disorder caused by mutation in PRKACG","type":"exact"},{"name":"severe autosomal recessive macrothrombocytopenia","type":"exact"}],"termid":"MONDO:0014518","terms_by_termid":{"MONDO:0014518":null},"xrefs":{"Monarch":{"xref_id":"0014518"}}}


id: PBO:0060095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 42","termid":"PBO:0060095"}


id: FYPO:0000772
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which perforations or gaps (other than nuclear pores) are present in the nuclear envelope.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope morphology during vegetative growth","termid":"FYPO:0000769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0002403","FYPO:0005447"],"is_obsolete":false,"name":"perforated nuclear envelope","synonyms":[{"name":"disrupted nuclear envelope","type":"related"},{"name":"disrupted nuclear membrane","type":"related"},{"name":"gapped nuclear envelope","type":"exact"},{"name":"perforated nuclear envelope during mitotic cell cycle","type":"related"},{"name":"perforated nuclear envelope during vegetative growth","type":"exact"},{"name":"perforated nuclear membrane","type":"related"},{"name":"permeabilized nucleus during mitosis","type":"exact"}],"termid":"FYPO:0000772"}


id: PBO:0027913
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_ionizing_radiation","termid":"PBO:0027913"}


id: PR:Q9UTH0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nup132 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTH0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup132 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.04","synonyms":[{"name":"Spom972h-nup132","type":"exact"},{"name":"nuclear pore protein nup132 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTH0"}


id: GO:0050310
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sulfite + 2 ferricytochrome c + H2O = sulfate + 2 ferrocytochrome c.","definition_xrefs":["MetaCyc:SULFITE-DEHYDROGENASE-RXN","EC:1.8.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, cytochrome as acceptor","termid":"GO:0016669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"sulfite dehydrogenase activity","secondary_identifiers":["RHEA:14281"],"synonyms":[{"name":"sulfite cytochrome c reductase activity","type":"related"},{"name":"sulfite-cytochrome c oxidoreductase activity","type":"related"},{"name":"sulfite:ferricytochrome-c oxidoreductase activity","type":"related"},{"name":"sulphite dehydrogenase activity","type":"exact"}],"termid":"GO:0050310"}


id: PBO:0075153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 9","termid":"PBO:0075153"}


id: GO:0003312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and functional features of a pancreatic polypeptide-producing cell. A pancreatic polypeptide-producing cell is a cell in the pancreas that produces pancreatic polypeptide.","definition_xrefs":["PMID:11076772","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enteroendocrine cell differentiation","termid":"GO:0035883"},{"relation_name":"part_of","term_name":"endocrine pancreas development","termid":"GO:0031018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreatic PP cell differentiation","synonyms":[{"name":"pancreatic polypeptide-producing cell differentiation","type":"exact"}],"termid":"GO:0003312"}


id: MONDO:0023098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extrasystoles short stature hyperpigmentation microcephaly","secondary_identifiers":["MEDGEN:1660843","UMLS:C4749763"],"synonyms":[{"name":"Char douglas Dungan syndrome","type":"related"}],"termid":"MONDO:0023098","xrefs":{"Monarch":{"xref_id":"0023098"}}}


id: GO:1900146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of a nodal signaling pathway, where the nodal signaling pathway is involved in determination of left/right asymmetry.","definition_xrefs":["GOC:vk","GOC:TermGenie","GOC:signaling","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of nodal signaling pathway involved in determination of left/right asymmetry (obsolete GO:1900146)","synonyms":[{"name":"down regulation of nodal signaling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"down-regulation of nodal signaling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"downregulation of nodal signaling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"inhibition of nodal signaling pathway involved in determination of left/right asymmetry","type":"narrow"},{"name":"negative regulation of nodal signalling pathway involved in determination of left/right asymmetry","type":"exact"}],"termid":"GO:1900146"}


id: MONDO:0011888
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An immunodeficiency associated with increased susceptibility to invasive infections caused by pyogenic bacteria.","definition_xrefs":["Orphanet:70592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 67","secondary_identifiers":["UMLS:C1843256","MESH:C563662","MESH:C564352","NANDO:1200361","GARD:10311","MEDGEN:375137","NANDO:2200762","OMIM:607676"],"synonyms":[{"name":"IPD1","type":"related"},{"name":"IRAK-4 deficiency","type":"related"},{"name":"IRAK4 deficiency","type":"exact"},{"name":"IRAK4D","type":"related"},{"name":"Interleukin receptor-associated kinase deficiency","type":"related"},{"name":"immunodeficiency 67","type":"exact"},{"name":"immunodeficiency due to interleukin-1 receptor-associated kinase-4 deficiency","type":"exact"},{"name":"invasive pneumococcal disease, protection against","type":"related"},{"name":"invasive pneumococcal disease, recurrent isolated, 1","type":"exact"},{"name":"invasive pneumococcal disease, recurrent isolated, type 1","type":"exact"}],"termid":"MONDO:0011888","xrefs":{"Monarch":{"xref_id":"0011888"}}}


id: GO:0043841
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (S)-lactate + GTP = 2-phospho-(S)-lactate + GDP.","definition_xrefs":["PMID:11535063"],"gene_count":0,"genotype_count":0,"name":"obsolete (S)-lactate 2-kinase activity (obsolete GO:0043841)","synonyms":[{"name":"lactate 2-kinase activity","type":"exact"}],"termid":"GO:0043841"}


id: PBO:0088943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PhoD-like superfamily","termid":"PBO:0088943"}


id: GO:0002560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the carrying out of an immune response by a basophil.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte mediated immunity","termid":"GO:0002444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basophil mediated immunity","termid":"GO:0002560"}


id: PBO:0005598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-1-semialdehyde 2,1-aminomutaseaminotransferase (predicted)","termid":"PBO:0005598"}


id: GO:0140274
data:
  {"annotated_genes":["SJAG_01837","SJAG_00082","SJAG_01805","SJAG_01224","SJAG_04140","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100439],"is_not":false,"summary":null,"term":"GO:0140274"},{"annotations":[104202,95618,118539,91815,113054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[118542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904967"}]},"cv_name":"biological_process","definition":"The cell cycle process where kinetochore microtubule attachment defects are corrected.","definition_xrefs":["PMID:15525536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01224":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"repair of kinetochore microtubule attachment defect","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"correction of kinetochore microtubule attachment defects","type":"exact"},{"name":"repair of kinetochore microtubule attachment defects","type":"exact"}],"termid":"GO:0140274","terms_by_termid":{"GO:0140274":null,"GO:0140429":null,"GO:1904967":null}}


id: PBO:0066554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 17 pseudogene 1","termid":"PBO:0066554"}


id: PBO:0084347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Largest subunit (p90) of the Chromatin Assembly Complex (CAF-1); chromatin assembly by CAF-1 is important for multiple processes including histone H3/H4 tetramerization, silencing at telomeres, mating type loci and rDNA, maintenance of kinetochore structure, deactivation of  DNA damage checkpoint after DNA repair, chromatin dynamics during transcription, and repression of divergent noncoding transcription","termid":"PBO:0084347"}


id: MONDO:0019377
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mycoplasma encephalitis is a rare infectious encephalitis characterized by an acute onset of neurological signs and symptoms (e.g. altered consciousness, seizures, headaches, meningeal signs, behavioral changes) due to bacterial infection by Mycoplasma pneumoniae. Patients typically present unspecific signs and symptoms, such as fever, nausea, vomiting, fatigue, prior to onset of neurological manifestations and frequently have a history of a respiratory tract infection (e.g. pneumonia, bronchiolitis, pharyngitis).","definition_xrefs":["Orphanet:83482"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious encephalitis","termid":"MONDO:0020067"},{"relation_name":"is_a","term_name":"Mycoplasmoides infection","termid":"MONDO:1030003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mycoplasma encephalitis","secondary_identifiers":["UMLS:C4707240","GARD:19040","MEDGEN:1636101"],"synonyms":[{"name":"Mycoplasma pneumoniae caused infectious encephalitis","type":"exact"},{"name":"Mycoplasma pneumoniae infectious encephalitis","type":"exact"}],"termid":"MONDO:0019377","xrefs":{"Monarch":{"xref_id":"0019377"}}}


id: PBO:0059101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mortality factor 4 like 1 pseudogene 7","termid":"PBO:0059101"}


id: PBO:0091451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA queuosine nucleoside glycosylase Qng1","termid":"PBO:0091451"}


id: PBO:0004875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-14 sterol reductase Erg24 (predicted)","termid":"PBO:0004875"}


id: FYPO:0007262
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount, distribution, morphology, or other physical characteristic of the eisosome is abnormal. The eisosome consists of a furrow-like plasma membrane sub-domain and associated integral transmembrane proteins, and the proteins (eisosome filaments) that form a scaffolding lattice on the cytoplasmic face.","definition_xrefs":["GO:0032126","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal eisosome","synonyms":[{"name":"abnormal eisosome during mitotic cell cycle","type":"related"},{"name":"abnormal eisosome during vegetative growth","type":"exact"},{"name":"abnormal eisosomes","type":"exact"}],"termid":"FYPO:0007262"}


id: PBO:0027602
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_secondary_cell_septum_thickness","termid":"PBO:0027602"}


id: FYPO:0006363
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the spindle forms with microtubules emanating from only one pole during the first meiotic nuclear division.","definition_xrefs":["PMID:24954111","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle morphology during meiosis I","termid":"FYPO:0005652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0002399","FYPO:0000002","FYPO:0000120","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"monopolar spindle during meiosis I","synonyms":[{"name":"V-shaped spindle during meiosis I","type":"related"},{"name":"fan-shaped spindle during meiosis I","type":"exact"},{"name":"monopolar spindle during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0006363"}


id: PBO:0086088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein phosphatase; has specificity for serine, threonine, and tyrosine residues; has a role in the DNA synthesis phase of the cell cycle","termid":"PBO:0086088"}


id: MONDO:0021582
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A flat, benign, pigmented spot on the skin caused by excessive deposition of melanin from an increased number of melanocytes in the cell layer directly above the basement membrane of the epidermis. Formation is usually related to sun exposure during youth, and the lesions do not typically progress to malignancy.","definition_xrefs":["NCIT:C3159"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"benign neoplasm","termid":"MONDO:0005165"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"lentigo","secondary_identifiers":["OMIM:150900","SCTID:402624000","UMLS:C0023321","MEDGEN:7301","MESH:D007911"],"synonyms":[{"name":"lentigines","type":"exact"},{"name":"lentiginosis","type":"exact"},{"name":"lentigo","type":"exact"}],"termid":"MONDO:0021582","xrefs":{"Monarch":{"xref_id":"0021582"}}}


id: FYPO:0002232
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells that have a larger volume than normal and are curved along the long axis. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:vw","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, swollen curved cells (obsolete FYPO:0002232)","synonyms":[{"name":"inviable microcolony, curved cells with increased cell size","type":"related"},{"name":"inviable microcolony, curved cells with increased cell volume","type":"exact"},{"name":"inviable microcolony, enlarged curved cells","type":"related"},{"name":"inviable microcolony, large curved cells","type":"related"},{"name":"inviable microcolony, swollen curved vegetative cells","type":"exact"}],"termid":"FYPO:0002232"}


id: MONDO:0015427
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paroxysmal dyskinesia (PD) is a rare heterogenous group of movement disorders manifesting as abnormal involuntary movements that recur episodically and last only a brief time. PD includes paroxysmal kinesigenic dyskinesia (PKD), paroxysmal non-kinesigenic dyskinesia (PNKD), paroxysmal exertion-induced dyskinesia (PED) and a variant form of PKD, infantile convulsion and choreoathetosis (ICCA syndrome).","definition_xrefs":["Orphanet:1431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paroxysmal dystonia","termid":"MONDO:0016058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"paroxysmal dyskinesia","secondary_identifiers":["UMLS:C0752210","ICD9:333.5","GARD:18721","MEDGEN:156242","MESH:D002819","SCTID:49949003"],"synonyms":[{"name":"paroxysmal choreoathetosis","type":"exact"},{"name":"paroxysmal dystonic choreoathetosis","type":"exact"}],"termid":"MONDO:0015427","xrefs":{"Monarch":{"xref_id":"0015427"}}}


id: PBO:0058831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8061","termid":"PBO:0058831"}


id: SO:0000755
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A plasmid that has been generated to act as a vector for foreign sequence.","direct_ancestors":[{"relation_name":"derives_from","term_name":"plasmid","termid":"SO:0000155"},{"relation_name":"is_a","term_name":"vector_replicon","termid":"SO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasmid_vector","secondary_identifiers":["http://en.wikipedia.org/wiki/Plasmid_vector#Vectors"],"synonyms":[{"name":"plasmid vector","type":"exact"}],"termid":"SO:0000755"}


id: PBO:0034783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hrd1 ubiquitin ligase complex synviolin family ubiquitin-protein ligase E3 subunit, Hrd1","termid":"PBO:0034783"}


id: MONDO:0011613
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Parkinson disease in which the cause of the disease is a mutation in the PINK1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"young-onset Parkinson disease","termid":"MONDO:0017279"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal recessive early-onset Parkinson disease 6","secondary_identifiers":["MEDGEN:342982","DOID:0060369","GARD:18605","MESH:C565276","OMIM:605909","UMLS:C1853833"],"synonyms":[{"name":"PARK6","type":"related"},{"name":"PINK1 Parkinson disease","type":"exact"},{"name":"Parkinson disease 6, autosomal recessive early-onset","type":"related"},{"name":"Parkinson disease 6, early onset","type":"related"},{"name":"Parkinson disease 6, early-onset","type":"related"},{"name":"Parkinson disease 6, late-onset, susceptibility to","type":"related"},{"name":"Parkinson disease caused by mutation in PINK1","type":"exact"},{"name":"Parkinson disease, autosomal recessive early-onset, digenic, Pink1/Dj1","type":"related"},{"name":"autosomal recessive early-onset Parkinson disease 6","type":"exact"},{"name":"autosomal recessive early-onset Parkinson disease type 6","type":"related"},{"name":"autosomal recessive early-onset Parkinson's disease 6","type":"related"},{"name":"early-onset Parkinson disease 6","type":"related"}],"termid":"MONDO:0011613","xrefs":{"Monarch":{"xref_id":"0011613"}}}


id: PBO:0036274
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Coiled-coil domain Telomerase Regulatory protein","termid":"PBO:0036274"}


id: GO:0045566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of TRAIL (TNF-related apoptosis inducing ligand) receptor 1.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of TRAIL receptor 1 biosynthetic process (obsolete GO:0045566)","synonyms":[{"name":"activation of TRAIL receptor 1 biosynthetic process","type":"narrow"},{"name":"positive regulation of TRAIL receptor 1 anabolism","type":"exact"},{"name":"positive regulation of TRAIL receptor 1 biosynthesis","type":"exact"},{"name":"positive regulation of TRAIL receptor 1 formation","type":"exact"},{"name":"positive regulation of TRAIL receptor 1 synthesis","type":"exact"},{"name":"stimulation of TRAIL receptor 1 biosynthetic process","type":"narrow"},{"name":"up regulation of TRAIL receptor 1 biosynthetic process","type":"exact"},{"name":"up-regulation of TRAIL receptor 1 biosynthetic process","type":"exact"},{"name":"upregulation of TRAIL receptor 1 biosynthetic process","type":"exact"}],"termid":"GO:0045566"}


id: MONDO:0000266
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A aspergillosis that involves the lung.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspergillosis","termid":"MONDO:0005657"},{"relation_name":"is_a","term_name":"fungal lung infectious disease","termid":"MONDO:0005766"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary aspergilloma","secondary_identifiers":["MEDGEN:390019","EFO:1001834","DOID:0050153","MESH:D055732","UMLS:C2350529"],"synonyms":[{"name":"lung aspergillosis","type":"exact"}],"termid":"MONDO:0000266","xrefs":{"Monarch":{"xref_id":"0000266"}}}


id: MONDO:0018816
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated neonatal sclerosing cholangitis is a rare, genetic, biliary tract disease characterized by severe neonatal-onset cholangiopathy with patent bile ducts and absence of ichthyosiform skin lesions. Patients present with jaundice, acholic stools, hepatosplenomegaly and high serum gamma-glutamyltransferase activity. Liver histology shows portal fibrosis, ductular proliferation, hepatocellular metallothionein deposits, and intralobular bile-pigment accumulations. Some patients may also have renal disease.","definition_xrefs":["Orphanet:480556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"sclerosing cholangitis","termid":"MONDO:0018646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"isolated neonatal sclerosing cholangitis","secondary_identifiers":["GARD:21983","OMIM:617394","UMLS:C4479344","MEDGEN:1393230"],"synonyms":[{"name":"NSC","type":"related"},{"name":"sclerosing cholangitis, neonatal","type":"related"}],"termid":"MONDO:0018816","xrefs":{"Monarch":{"xref_id":"0018816"}}}


id: MONDO:0030809
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 72","secondary_identifiers":["MEDGEN:1803118","OMIM:619867","UMLS:C5676980","DOID:0070571"],"synonyms":[{"name":"SPGF72","type":"exact"},{"name":"spermatogenic failure 72","type":"exact"}],"termid":"MONDO:0030809","xrefs":{"Monarch":{"xref_id":"0030809"}}}


id: PBO:0086898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transporter in the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; mutations in membrane-spanning domains permit cation and histidinol uptake","termid":"PBO:0086898"}


id: PBO:0040694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrylcholinesterase","termid":"PBO:0040694"}


id: GO:0102965
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain fatty acyl-CoA + 2 H+ + 2 NADPH = a long-chain primary fatty alcohol + CoA + 2 NADP+. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["GOC:pz","RHEA:52716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"alcohol-forming long-chain fatty acyl-CoA reductase activity","secondary_identifiers":["MetaCyc:RXN-9344","EC:1.2.1.84"],"synonyms":[{"name":"alcohol-forming fatty acyl-CoA reductase activity","type":"broad"}],"termid":"GO:0102965"}


id: GO:0086033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled acetylcholine receptor signaling pathway that contributes to a decrease in frequency or rate of heart contraction. Binding of acetylcholine to a G protein-coupled (muscarinic) receptor on the surface of the signal-receiving cell results in the alpha subunit of a coupled G-protein binding to GTP. This results in the separation of the beta-gamma complex from the alpha subunit. Both the alpha subunit, and the beta-gamma complex can continue to signal to bring about membrane hyperpolarization and a reduction in heart rate.","definition_xrefs":["Wikipedia:G_protein-gated_ion_channel","GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled acetylcholine receptor signaling pathway involved in heart process","termid":"GO:0086093"},{"relation_name":"part_of","term_name":"negative regulation of heart rate by acetylcholine","termid":"GO:0003063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"G protein-coupled acetylcholine receptor signaling pathway involved in negative regulation of heart rate","synonyms":[{"name":"G-protein coupled acetylcholine receptor signaling pathway involved in negative regulation of heart rate","type":"exact"},{"name":"M2 receptor signalling pathway involved in negative regulation of heart rate","type":"exact"},{"name":"muscarinic acetylcholine receptor signaling pathway involved in negative regulation of heart rate","type":"exact"},{"name":"muscarinic receptor signalling pathway involved in negative regulation of heart rate","type":"exact"}],"termid":"GO:0086033"}


id: PBO:0080738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain containing E3 ubiquitin protein ligase 2","termid":"PBO:0080738"}


id: PBO:0028065
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcriptional_response_to_pheromone","termid":"PBO:0028065"}


id: GO:0032281
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. The AMPA receptors mediate fast synaptic transmission in the CNS and are composed of subunits GluR1-4, products from separate genes. These subunits have an extracellular N-terminus and an intracellular C-terminus.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ionotropic glutamate receptor complex","termid":"GO:0008328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"AMPA glutamate receptor complex","synonyms":[{"name":"AMPA receptor","type":"related"},{"name":"AMPA-selective glutamate receptor complex","type":"exact"},{"name":"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex","type":"exact"}],"termid":"GO:0032281"}


id: MONDO:0001460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"goiter","termid":"MONDO:0005397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dyshormonogenic goiter","secondary_identifiers":["SCTID:190304001","DOID:12175","MEDGEN:508873","ICD9:246.1","UMLS:C0152077"],"termid":"MONDO:0001460","xrefs":{"Monarch":{"xref_id":"0001460"}}}


id: GO:1905382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of snRNA transcription mediated by RNA polymerase II.","definition_xrefs":["GOC:TermGenie","GOC:bhm","PMID:10022900","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase II","termid":"GO:0045944"},{"relation_name":"is_a","term_name":"regulation of snRNA transcription by RNA polymerase II","termid":"GO:1905380"},{"relation_name":"positively_regulates","term_name":"snRNA transcription by RNA polymerase II","termid":"GO:0042795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016073"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"positively_regulates","termid":"GO:0016073"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0006355","GO:0008150","GO:0016073"],"is_obsolete":false,"name":"positive regulation of snRNA transcription by RNA polymerase II","synonyms":[{"name":"activation of snRNA transcription from Pol II promoter","type":"narrow"},{"name":"activation of snRNA transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of snRNA transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of snRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of snRNA transcription from Pol II promoter","type":"exact"},{"name":"up regulation of snRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of snRNA transcription from Pol II promoter","type":"exact"},{"name":"up-regulation of snRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of snRNA transcription from Pol II promoter","type":"exact"},{"name":"upregulation of snRNA transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1905382"}


id: PBO:0084896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial translation initiation factor 2","termid":"PBO:0084896"}


id: PBO:0048446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastrulation brain homeobox 2","termid":"PBO:0048446"}


id: PBO:0030736
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_G2_phase_during_nitrogen_starvation","termid":"PBO:0030736"}


id: PBO:0043734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C pseudogene 13","termid":"PBO:0043734"}


id: PBO:0071609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 27","termid":"PBO:0071609"}


id: PBO:0017011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR36","termid":"PBO:0017011"}


id: GO:0051957
data:
  {"annotated_genes":["SJAG_00991","SJAG_05346","SJAG_02605","SJAG_03591"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95141,100692,112389,93559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"},{"annotations":[100693,93560,95142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"},{"annotations":[95143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the directed movement of amino acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amine transport","termid":"GO:0051954"},{"relation_name":"is_a","term_name":"regulation of amino acid transport","termid":"GO:0051955"},{"relation_name":"positively_regulates","term_name":"amino acid transport","termid":"GO:0006865"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of amino acid transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of amino acid transport","type":"narrow"},{"name":"positive regulation of amino acid transmembrane transport","type":"exact"},{"name":"stimulation of amino acid transport","type":"narrow"},{"name":"up regulation of amino acid transport","type":"exact"},{"name":"up-regulation of amino acid transport","type":"exact"},{"name":"upregulation of amino acid transport","type":"exact"}],"termid":"GO:0051957","terms_by_termid":{"GO:1905534":null,"GO:1905589":null,"GO:1905626":null}}


id: GO:0009169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of purine ribonucleoside monophosphate, a compound consisting of a purine base linked to a ribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside monophosphate catabolic process","termid":"GO:0009128"},{"relation_name":"is_a","term_name":"ribonucleoside monophosphate catabolic process","termid":"GO:0009158"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate metabolic process","termid":"GO:0009167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"purine ribonucleoside monophosphate catabolic process","synonyms":[{"name":"purine ribonucleoside monophosphate breakdown","type":"exact"},{"name":"purine ribonucleoside monophosphate catabolism","type":"exact"},{"name":"purine ribonucleoside monophosphate degradation","type":"exact"}],"termid":"GO:0009169"}


id: PBO:0085794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; component of the SWR1 complex, which exchanges histone variant H2AZ (Htz1p) for chromatin-bound histone H2A; required for formation of nuclear-associated array of smooth endoplasmic reticulum known as karmellae","termid":"PBO:0085794"}


id: PBO:0059870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 8","termid":"PBO:0059870"}


id: GO:0070552
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the FAM175B/ABRO1, BRCC3/BRCC36, BRE/BRCC45 and MERIT40/NBA1 proteins, and specifically cleaves K63-linked polyubiquitin chains.","definition_xrefs":["GOC:mah","PMID:19214193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"BRISC complex","termid":"GO:0070552"}


id: PBO:0109476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element (truncated) Wtf1","termid":"PBO:0109476"}


id: GO:0040020
data:
  {"annotated_genes":["SJAG_01082","SJAG_03327","SJAG_04287","SJAG_03438","SJAG_01680","SJAG_00364","SJAG_00266","SJAG_02712","SJAG_01330","SJAG_04259"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98750],"is_not":false,"summary":null,"term":"GO:0040020"},{"annotations":[109806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010846"},{"annotations":[108146,116356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[108448,116119,117918,90874],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051598"},{"annotations":[109809],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"},{"annotations":[115646],"is_not":false,"rel_names":["positively_regulates","regulates","is_a"],"summary":null,"term":"GO:1905326"},{"annotations":[90876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010845"},{"annotations":[103158],"is_not":false,"rel_names":["regulates","is_a"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of meiotic nuclear division, the process in which the nucleus of a diploid cell divides twice forming four haploid cells, one or more of which usually function as gametes.","definition_xrefs":["GOC:ems","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of meiotic cell cycle","termid":"GO:0051445"},{"relation_name":"is_a","term_name":"regulation of nuclear division","termid":"GO:0051783"},{"relation_name":"regulates","term_name":"meiotic nuclear division","termid":"GO:0140013"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00364":null,"SJAG_01082":null,"SJAG_01330":null,"SJAG_01680":null,"SJAG_02712":null,"SJAG_03327":null,"SJAG_03438":null,"SJAG_04259":null,"SJAG_04287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0140013"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0140013"],"is_obsolete":false,"name":"regulation of meiotic nuclear division","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of meiosis","type":"broad"}],"termid":"GO:0040020","terms_by_termid":{"GO:0010845":null,"GO:0010846":null,"GO:0040020":null,"GO:0045128":null,"GO:0051598":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: PBO:0045765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enoyl-CoA delta isomerase 1","termid":"PBO:0045765"}


id: PBO:0055064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2480","termid":"PBO:0055064"}


id: PBO:0038474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 12","termid":"PBO:0038474"}


id: PBO:0042758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 20","termid":"PBO:0042758"}


id: PBO:0043815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copine 6","termid":"PBO:0043815"}


id: PBO:0012024
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae VAS1","termid":"PBO:0012024"}


id: RO:0002106
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation between a motor neuron and a muscle that it synapses to via a type Is bouton.","direct_ancestors":[{"relation_name":"is_a","term_name":"synapsed_to","termid":"RO:0002120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapsed_via_type_Is_bouton_to","termid":"RO:0002106"}


id: PBO:0088092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetyl-glucosamine-1-P transferase; transfers Glc-Nac-P from UDP-GlcNac to Dol-P in the ER in the first step of the dolichol pathway of protein asparagine-linked glycosylation; inhibited by tunicamycin; human homolog DPAGT1 can complement yeast ALG7 mutant","termid":"PBO:0088092"}


id: MONDO:0021639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A glioma arising from the central nervous system. This category includes diffuse astrocytoma, ependymoma, oligodendroglioma, and oligoastrocytoma.","definition_xrefs":["NCIT:C132505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"low grade glioma","termid":"MONDO:0021637"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grade II glioma","secondary_identifiers":["MEDGEN:1391502","UMLS:C4330050"],"synonyms":[{"name":"WHO grade II glioma","type":"exact"},{"name":"grade II glioma","type":"exact"}],"termid":"MONDO:0021639","xrefs":{"Monarch":{"xref_id":"0021639"}}}


id: PBO:0091975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA, probable 3'UTR of ptc2","termid":"PBO:0091975"}


id: PBO:0045625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 37 (pseudogene)","termid":"PBO:0045625"}


id: GO:1900951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of 18-methylnonadec-1-ene biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of olefin biosynthetic process","termid":"GO:1900912"},{"relation_name":"is_a","term_name":"regulation of 18-methylnonadec-1-ene biosynthetic process","termid":"GO:1900950"},{"relation_name":"is_a","term_name":"negative regulation of 18-methylnonadec-1-ene metabolic process","termid":"GO:1900954"},{"relation_name":"negatively_regulates","term_name":"18-methylnonadec-1-ene biosynthetic process","termid":"GO:1900881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of 18-methylnonadec-1-ene biosynthetic process","synonyms":[{"name":"down regulation of 18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"down regulation of 18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"down regulation of 18-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"down regulation of 18-methylnonadec-1-ene formation","type":"exact"},{"name":"down regulation of 18-methylnonadec-1-ene synthesis","type":"exact"},{"name":"down-regulation of 18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"down-regulation of 18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"down-regulation of 18-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"down-regulation of 18-methylnonadec-1-ene formation","type":"exact"},{"name":"down-regulation of 18-methylnonadec-1-ene synthesis","type":"exact"},{"name":"downregulation of 18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"downregulation of 18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"downregulation of 18-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"downregulation of 18-methylnonadec-1-ene formation","type":"exact"},{"name":"downregulation of 18-methylnonadec-1-ene synthesis","type":"exact"},{"name":"inhibition of 18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"inhibition of 18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"inhibition of 18-methylnonadec-1-ene biosynthetic process","type":"narrow"},{"name":"inhibition of 18-methylnonadec-1-ene formation","type":"exact"},{"name":"inhibition of 18-methylnonadec-1-ene synthesis","type":"exact"},{"name":"negative regulation of 18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"negative regulation of 18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"negative regulation of 18-methylnonadec-1-ene formation","type":"exact"},{"name":"negative regulation of 18-methylnonadec-1-ene synthesis","type":"exact"}],"termid":"GO:1900951"}


id: GO:0004486
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5,10-methylenetetrahydrofolate + NAD(P)+ = 5,10-methenyltetrahydrofolate + NAD(P)H + H+.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity (obsolete GO:0004486)","secondary_identifiers":["Reactome:R-HSA-200718","Reactome:R-HSA-200644"],"synonyms":[{"name":"5,10-methylene-THF dehydrogenase activity","type":"exact"},{"name":"N5,N10-methylenetetrahydrofolate dehydrogenase activity","type":"related"}],"termid":"GO:0004486"}


id: GO:0043446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an alkane, any acyclic branched or unbranched hydrocarbon having the general formula CnH2n+2, as carried out by individual cells.","definition_xrefs":["Wikipedia:Alkane","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocarbon metabolic process","termid":"GO:0120252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alkane metabolic process","synonyms":[{"name":"alkane metabolism","type":"exact"}],"termid":"GO:0043446"}


id: GO:0031094
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A network of membrane-bounded compartments found in blood platelets, where they regulate platelet activation by sequestering or releasing calcium. The dense tubular network exists as thin elongated membranes in resting platelets, and undergoes a major ultrastructural change, to a rounded vesicular form, upon addition of thrombin.","definition_xrefs":["PMID:1322202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"platelet dense tubular network","termid":"GO:0031094"}


id: MONDO:0016081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Coronary arterial fistulas are a connection between one or more of the coronary arteries and a cardiac chamber or great vessel.","definition_xrefs":["Orphanet:2041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coronary artery congenital malformation","termid":"MONDO:0015203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronary arterial fistulas","secondary_identifiers":["MEDGEN:488822","NANDO:2200296","UMLS:C0265898","MedDRA:10069441","GARD:1533"],"synonyms":[{"name":"Coronaro-cardiac fistula","type":"exact"},{"name":"coronary arterial malformations","type":"exact"}],"termid":"MONDO:0016081","xrefs":{"Monarch":{"xref_id":"0016081"}}}


id: PBO:0119277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial and cytoplasmic glutaminyl-tRNA ligase Qrs1","termid":"PBO:0119277"}


id: GO:0048496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the identity of an animal organ is maintained. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"part_of","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of animal organ identity","termid":"GO:0048496"}


id: PBO:0109081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3105","termid":"PBO:0109081"}


id: GO:0019260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 1,2-dichloroethane, a major commodity chemical used, for example, in the manufacture of vinyl chloride.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1,2-dichloroethane metabolic process","termid":"GO:0018899"},{"relation_name":"is_a","term_name":"halogenated hydrocarbon catabolic process","termid":"GO:0042206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"1,2-dichloroethane catabolic process","secondary_identifiers":["MetaCyc:12DICHLORETHDEG-PWY"],"synonyms":[{"name":"1,2-dichloroethane breakdown","type":"exact"},{"name":"1,2-dichloroethane catabolism","type":"exact"},{"name":"1,2-dichloroethane degradation","type":"exact"}],"termid":"GO:0019260"}


id: GO:0052230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of the directed movement of substances within the cell or cells of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of intracellular transport in other organism involved in symbiotic interaction (obsolete GO:0052230)","synonyms":[{"name":"modulation of intracellular trafficking in other organism","type":"exact"},{"name":"modulation of intracellular transport in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052230"}


id: MONDO:0800493
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A focal epilepsy syndrome where the age at onset is typically in adolescence or adulthood. Affected individuals have focal aware seizures with mesial temporal lobe features, especially prominent déjà vu. Most patients have a normal MRI, and seizures respond to treatment. A subgroup is recognised that have antecedent febrile seizures, hippocampal atrophy, and drug resistant seizures. Direct questioning of relatives may be required to identify this familial epilepsy syndrome, as many individuals consider their déjà vu experiences as mild and they may not have been diagnosed as seizures.","direct_ancestors":[{"relation_name":"is_a","term_name":"temporal lobe epilepsy","termid":"MONDO:0005115"},{"relation_name":"is_a","term_name":"variable-age onset focal epilepsy syndrome","termid":"MONDO:0800492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"familial mesial temporal lobe epilepsy","synonyms":[{"name":"FMTLE","type":"exact"}],"termid":"MONDO:0800493","xrefs":{"Monarch":{"xref_id":"0800493"}}}


id: PBO:0088118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar carboxypeptidase Y (proteinase C, CPY); broad-specificity C-terminal exopeptidase involved in non-specific protein degradation in the vacuole; involved, along with functional homolog Prc1p, in vacuolar zymogen activation, breakdown of the autophagic body, and autophagosome-dependent protein synthesis; role in phytochelatin synthesis; localizes to the vacuole lumen; member of the serine carboxypeptidase family; N-glycosylated","termid":"PBO:0088118"}


id: PBO:0045441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPY19L4 pseudogene 1","termid":"PBO:0045441"}


id: MONDO:0044272
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete body mass index quantitative trait locus 9 (obsolete MONDO:0044272)","secondary_identifiers":["OMIM:602025"],"synonyms":[{"name":"BMIQ9","type":"related"},{"name":"body MASS index quantitative trait locus 9","type":"related"},{"name":"obesity, severe, susceptibility to, BMIQ9","type":"exact"},{"name":"obesity, susceptibility to","type":"related"}],"termid":"MONDO:0044272","xrefs":{"Monarch":{"xref_id":"0044272"}}}


id: GO:0086100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by endothelin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:10977869","GOC:BHF","GOC:bf","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"endothelin receptor signaling pathway","synonyms":[{"name":"endothelin signaling pathway","type":"related"}],"termid":"GO:0086100"}


id: MONDO:0013198
data:
  {"annotated_genes":["SJAG_02431","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88249,88250],"is_not":false,"summary":null,"term":"MONDO:0013198"}]},"cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the MYH6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1EE","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110453","MESH:C567683","OMIM:613252","GARD:15639","UMLS:C2750466","MEDGEN:412965"],"synonyms":[{"name":"CMD1EE","type":"exact"},{"name":"MYH6 familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1EE","type":"related"},{"name":"cardiomyopathy, dilated, type 1Ee","type":"exact"},{"name":"dilated cardiomyopathy type 1EE","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in MYH6","type":"exact"}],"termid":"MONDO:0013198","terms_by_termid":{"MONDO:0013198":null},"xrefs":{"Monarch":{"xref_id":"0013198"}}}


id: MONDO:0006650
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ischemia or infarction of the spinal cord in the distribution of the anterior spinal artery, which supplies the ventral two-thirds of the spinal cord. This condition is usually associated with atherosclerosis of the aorta and may result from dissection of an aortic aneurysm or rarely dissection of the anterior spinal artery. Clinical features include weakness and loss of pain and temperature sensation below the level of injury, with relative sparing of position and vibratory sensation. (From Adams et al., Principles of Neurology, 6th ed, pp1249-50)","definition_xrefs":["MESH:D020759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arterial disorder","termid":"MONDO:0000473"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterior spinal artery syndrome","secondary_identifiers":["EFO:1000810","DOID:6712","ICD9:433.80","MedDRA:10002703","SCTID:2972007","UMLS:C0221069","MEDGEN:65125"],"synonyms":[{"name":"anterior spinal artery syndromic disease","type":"exact"},{"name":"syndromic disease of anterior spinal artery","type":"exact"}],"termid":"MONDO:0006650","xrefs":{"Monarch":{"xref_id":"0006650"}}}


id: PBO:0059092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MORC family CW-type zinc finger 4","termid":"PBO:0059092"}


id: MOD:00852
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a carboxamido group with a carboxyl group labeled with one (18)O.","definition_xrefs":["PubMed:8382902","Unimod:366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(18)O labeled deamidated residue","termid":"MOD:00851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1x(18)O labeled deamidated residue","termid":"MOD:00852"}


id: GO:0140944
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl20-[histone H4] + S-adenosyl-L-methionine = H+ + N6-methyl-L-lysyl20-[histone H4] + S-adenosyl-L-homocysteine. This reaction is the addition of a methyl group to the unmethylated lysine residue at position 20 of histone H4, producing histone H4K20me.","definition_xrefs":["RHEA:60344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4K20 methyltransferase activity","termid":"GO:0042799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0008276","GO:0140096","GO:0003824","GO:0016740","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"histone H4K20 monomethyltransferase activity","secondary_identifiers":["EC:2.1.1.361"],"synonyms":[{"name":"histone H4-K20 methylation","type":"broad"},{"name":"histone H4K20 methylase activity","type":"broad"},{"name":"histone H4K20 methylation","type":"broad"},{"name":"histone H4K20 monomethylation","type":"exact"},{"name":"histone lysine N-monomethyltransferase activity (H4-K20 specific)","type":"exact"}],"termid":"GO:0140944"}


id: PBO:0057224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 380","termid":"PBO:0057224"}


id: PBO:0120295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSE3 component of SMC5/6 complex","termid":"PBO:0120295"}


id: PBO:0058269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4647","termid":"PBO:0058269"}


id: PBO:0079502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin like 4B","termid":"PBO:0079502"}


id: MONDO:0014304
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, complex form of hereditary spastic paraplegia characterized by an onset in infancy of spastic paraplegia (presenting with the inability to walk unsupported and a scissors gait) associated with a motor and sensory polyneuropathy with loss of terminal digits and acropathy. SPG61 is due to a mutation in the ARL6IP1 gene (16p12-p11.2) encoding the ADP-ribosylation factor-like protein 6-interacting protein 1.","definition_xrefs":["Orphanet:401780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 61","secondary_identifiers":["GARD:17656","DOID:0110812","MEDGEN:816624","OMIM:615685","SCTID:726611001","UMLS:C3810294"],"synonyms":[{"name":"ARL6IP1 autosomal recessive complex spastic paraplegia","type":"exact"},{"name":"SPG61","type":"exact"},{"name":"autosomal recessive complex spastic paraplegia caused by mutation in ARL6IP1","type":"exact"},{"name":"autosomal recessive spastic paraplegia 61","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 61","type":"exact"},{"name":"hereditary spastic paraplegia 61","type":"exact"},{"name":"hereditary spastic paraplegia type 61","type":"exact"},{"name":"spastic paraplegia 61, autosomal recessive","type":"related"}],"termid":"MONDO:0014304","xrefs":{"Monarch":{"xref_id":"0014304"}}}


id: GO:1905461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vascular associated smooth muscle cell apoptotic process.","definition_xrefs":["GOC:TermGenie","GOC:rph","PMID:26493107","GOC:BHF","GO_REF:0000058","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of smooth muscle cell apoptotic process","termid":"GO:0034393"},{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell apoptotic process","termid":"GO:1905459"},{"relation_name":"positively_regulates","term_name":"vascular associated smooth muscle cell apoptotic process","termid":"GO:1905288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vascular associated smooth muscle cell apoptotic process","synonyms":[{"name":"activation of VSMC apoptosis","type":"narrow"},{"name":"activation of VSMC apoptotic process","type":"narrow"},{"name":"activation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"activation of vascular associated smooth muscle cell apoptotic process","type":"narrow"},{"name":"activation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"activation of vascular smooth muscle cell apoptotic process","type":"narrow"},{"name":"positive regulation of VSMC apoptosis","type":"narrow"},{"name":"positive regulation of VSMC apoptotic process","type":"exact"},{"name":"positive regulation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"positive regulation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"positive regulation of vascular smooth muscle cell apoptotic process","type":"exact"},{"name":"up regulation of VSMC apoptosis","type":"narrow"},{"name":"up regulation of VSMC apoptotic process","type":"exact"},{"name":"up regulation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"up regulation of vascular associated smooth muscle cell apoptotic process","type":"exact"},{"name":"up regulation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"up regulation of vascular smooth muscle cell apoptotic process","type":"exact"},{"name":"up-regulation of VSMC apoptosis","type":"narrow"},{"name":"up-regulation of VSMC apoptotic process","type":"exact"},{"name":"up-regulation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"up-regulation of vascular associated smooth muscle cell apoptotic process","type":"exact"},{"name":"up-regulation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"up-regulation of vascular smooth muscle cell apoptotic process","type":"exact"},{"name":"upregulation of VSMC apoptosis","type":"narrow"},{"name":"upregulation of VSMC apoptotic process","type":"exact"},{"name":"upregulation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"upregulation of vascular associated smooth muscle cell apoptotic process","type":"exact"},{"name":"upregulation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"upregulation of vascular smooth muscle cell apoptotic process","type":"exact"}],"termid":"GO:1905461"}


id: PBO:0064620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 6 homeobox 2","termid":"PBO:0064620"}


id: FYPO:0004381
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the attachment of spindle microtubules to the kinetochore during a mitotic nuclear division results in the connection of a single kinetochore to both spindle poles.","definition_xrefs":["PomBase:mah","PMID:17426725","PMID:21306900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"merotelic kinetochore attachment","termid":"FYPO:0002651"},{"relation_name":"is_a","term_name":"abnormal attachment of mitotic spindle microtubules to kinetochore","termid":"FYPO:0004213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0000641","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0000337"],"is_obsolete":false,"name":"merotelic kinetochore attachment during mitosis","synonyms":[{"name":"merotelic attachment of spindle microtubules to kinetochore during mitosis","type":"exact"},{"name":"merotelic kinetochore attachment during mitotic M phase","type":"related"},{"name":"merotelic kinetochore attachment during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0004381"}


id: MONDO:0003499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma of the skin with a prominent spindle cell component.","definition_xrefs":["NCIT:C4666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin squamous cell carcinoma","termid":"MONDO:0002529"},{"relation_name":"is_a","term_name":"keratinizing squamous cell carcinoma","termid":"MONDO:0005056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"sarcomatoid squamous cell skin carcinoma","secondary_identifiers":["SCTID:403900000","UMLS:C0349656","DOID:5536","SCTID:254653005","MEDGEN:87611","NCIT:C27084"],"synonyms":[{"name":"spindle cell (sarcomatoid) squamous cell carcinoma","type":"related"},{"name":"spindle cell (sarcomatoid) squamous cell skin carcinoma","type":"exact"},{"name":"spindle cell squamous carcinoma of skin","type":"exact"},{"name":"spindle cell squamous carcinoma of the skin","type":"exact"},{"name":"spindle cell squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0003499","xrefs":{"Monarch":{"xref_id":"0003499"}}}


id: PBO:0003760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial fission protein Fis1 (predicted)","termid":"PBO:0003760"}


id: PBO:0039782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 9","termid":"PBO:0039782"}


id: MONDO:0013585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hydrolethalus syndrome in which the cause of the disease is a mutation in the KIF7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolethalus syndrome","termid":"MONDO:0006037"},{"relation_name":"is_a","term_name":"KIF7-related ciliopathy","termid":"MONDO:0800463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"hydrolethalus syndrome 2","secondary_identifiers":["OMIM:614120","DOID:0111356","MEDGEN:481529","GARD:15759","UMLS:C3279899"],"synonyms":[{"name":"HLS2","type":"related"},{"name":"KIF7 hydrolethalus syndrome","type":"exact"},{"name":"hydrolethalus syndrome 2","type":"exact"},{"name":"hydrolethalus syndrome caused by mutation in KIF7","type":"exact"},{"name":"hydrolethalus syndrome type 2","type":"exact"}],"termid":"MONDO:0013585","xrefs":{"Monarch":{"xref_id":"0013585"}}}


id: PATO:0015004
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A increase in the ability of a process to produce its output.","definition_xrefs":["PATOC:PortlandMeetingFeb2015"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased process quality","termid":"PATO:0002304"},{"relation_name":"is_a","term_name":"process efficacy","termid":"PATO:0015002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased efficacy","termid":"PATO:0015004"}


id: PBO:0065025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin 3 pseudogene 4","termid":"PBO:0065025"}


id: PBO:0073240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenophosphate synthetase 1 pseudogene 4","termid":"PBO:0073240"}


id: GO:0030611
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: arsenite + A + H2O = arsenate + AH2 + H+.","definition_xrefs":["RHEA:18449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on phosphorus or arsenic in donors","termid":"GO:0030613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"arsenate reductase activity","secondary_identifiers":["KEGG_REACTION:R05752","MetaCyc:1.20.99.1-RXN","EC:1.20.99.1"],"synonyms":[{"name":"arsenate reductase (donor) activity","type":"exact"},{"name":"arsenate:(acceptor) oxidoreductase activity","type":"related"},{"name":"arsenate:acceptor oxidoreductase activity","type":"related"}],"termid":"GO:0030611"}


id: PBO:0052273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 5A","termid":"PBO:0052273"}


id: GO:0061698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a glutaryl group (CO-CH2-CH2-CH2-CO) from a residue in a peptide or protein.","definition_xrefs":["GOC:dph","PMID:24703693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deacylation","termid":"GO:0035601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein deglutarylation","termid":"GO:0061698"}


id: MONDO:0859362
data:
  {"annotated_genes":["SJAG_00154"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87348],"is_not":false,"summary":null,"term":"MONDO:0859362"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hyperinsulinemic hypoglycemia","termid":"MONDO:0005803"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00154":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"hyperinsulinemic hypoglycemia, familial, 8","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0081328","MEDGEN:1824072","OMIM:620211","UMLS:C5774299"],"termid":"MONDO:0859362","terms_by_termid":{"MONDO:0859362":null},"xrefs":{"Monarch":{"xref_id":"0859362"}}}


id: RO:HOM0000058
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Homocracy that involves recognizably corresponding characters that occurs in two or more taxa, or as a repeated unit within an individual.","definition_xrefs":["DOI:10.1002/1521-1878(200009)22:9<846::AID-BIES10>3.0.CO;2-R"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_homocracy_relationship_with","termid":"RO:HOM0000003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_syngeny_relationship_with","synonyms":[{"name":"generative homology","type":"exact"},{"name":"syngenous to","type":"exact"}],"termid":"RO:HOM0000058"}


id: MONDO:0004013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of embryonal rhabdomyosarcoma arising from the vagina. It is characterized by the formation of a cambium layer in the affected tissue and polypoid nodules with an abundant myxoid stroma. It occurs in female adults.","definition_xrefs":["NCIT:C40267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"botryoid-type embryonal rhabdomyosarcoma of the vagina","termid":"MONDO:0003994"},{"relation_name":"is_a","term_name":"adult botryoid rhabdomyosarcoma","termid":"MONDO:0004012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult vagina botryoid embryonal rhabdomyosarcoma","secondary_identifiers":["MEDGEN:272994","DOID:6848","UMLS:C1515893"],"synonyms":[{"name":"adult botryoid-type embryonal rhabdomyosarcoma of the vagina","type":"exact"},{"name":"adult sarcoma Botryoides of the vagina","type":"exact"},{"name":"adult vagina botryoid rhabdomyosarcoma","type":"related"},{"name":"botryoid-type embryonal rhabdomyosarcoma of the vagina of adults","type":"exact"}],"termid":"MONDO:0004013","xrefs":{"Monarch":{"xref_id":"0004013"}}}


id: PBO:0029692
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromosome_morphology,_single_irregular_mass","termid":"PBO:0029692"}


id: MONDO:0042983
data:
  {"annotated_genes":["SJAG_04213","SJAG_00991","SJAG_05346","SJAG_01111","SJAG_00289","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009578"},{"annotations":[89126,89127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024517"},{"annotations":[88943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008612"},{"annotations":[88252,88251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013199"}]},"cv_name":"mondo","definition":"A group of disorders characterized by ectodermal-based malformations and neoplastic growths in the skin, nervous system, and other organs.","definition_xrefs":["MESH:D020752"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00289":null,"SJAG_00991":null,"SJAG_01111":null,"SJAG_03453":null,"SJAG_04213":null,"SJAG_05346":null},"genotype_count":0,"is_obsolete":false,"name":"neurocutaneous syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:78572006","NCIT:C84348","MEDGEN:82706","NANDO:2100220","UMLS:C0265316"],"synonyms":[{"name":"Phacomatoses","type":"related"},{"name":"Phacomatosis","type":"related"},{"name":"Phakomatoses","type":"related"},{"name":"neurocutaneous disorder","type":"related"},{"name":"neurocutaneous disorders","type":"related"},{"name":"neurocutaneous syndrome","type":"exact"},{"name":"neuroectodermal dysplasia","type":"related"},{"name":"neuroectodermal dysplasia syndrome","type":"related"},{"name":"neuroectodermal dysplasia syndromes","type":"related"},{"name":"phakomatosis","type":"related"},{"name":"syndrome, neurocutaneous","type":"related"},{"name":"syndrome, neuroectodermal dysplasia","type":"related"},{"name":"syndromes, neurocutaneous","type":"related"},{"name":"syndromes, neuroectodermal dysplasia","type":"related"}],"termid":"MONDO:0042983","terms_by_termid":{"MONDO:0008612":null,"MONDO:0009578":null,"MONDO:0013199":null,"MONDO:0024517":null},"xrefs":{"Monarch":{"xref_id":"0042983"}}}


id: GO:0046342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of CDP-diacylglycerol, CDP-1,2-diacylglycerol, a substance composed of diacylglycerol in glycosidic linkage with cytidine diphosphate.","definition_xrefs":["PMID:6147353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDP-diacylglycerol metabolic process","termid":"GO:0046341"},{"relation_name":"is_a","term_name":"glycerophospholipid catabolic process","termid":"GO:0046475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"CDP-diacylglycerol catabolic process","synonyms":[{"name":"CDP-diacylglycerol breakdown","type":"exact"},{"name":"CDP-diacylglycerol catabolism","type":"exact"},{"name":"CDP-diacylglycerol degradation","type":"exact"}],"termid":"GO:0046342"}


id: PBO:0055744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LMX1B divergent transcript","termid":"PBO:0055744"}


id: PBO:0038276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide_insertion","termid":"PBO:0038276"}


id: GO:0141053
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of ubiquitin to a histone H2A substrate.","definition_xrefs":["PMID:25303536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone ubiquitin ligase activity","termid":"GO:0140852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004842"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0019787","GO:0003674","GO:0140096","GO:0004842","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"histone H2A ubiquitin ligase activity","termid":"GO:0141053"}


id: PBO:0047595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumarate hydratase","termid":"PBO:0047595"}


id: PBO:0057959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3681","termid":"PBO:0057959"}


id: GO:0007519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental sequence of events leading to the formation of adult skeletal muscle tissue. The main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle tissue development","termid":"GO:0014706"},{"relation_name":"part_of","term_name":"skeletal muscle organ development","termid":"GO:0060538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle tissue development","secondary_identifiers":["GO:0048637"],"synonyms":[{"name":"myogenesis","type":"related"}],"termid":"GO:0007519"}


id: PBO:0058647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6776","termid":"PBO:0058647"}


id: GO:0004955
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a prostaglandin (PG) to initiate a change in cell activity.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostanoid receptor activity","termid":"GO:0004954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"prostaglandin receptor activity","termid":"GO:0004955"}


id: PBO:0079013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-SeC (anticodon TCA) 1-1","termid":"PBO:0079013"}


id: MONDO:0009880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Short stature-pituitary and cerebellar defects-small sella turcica syndrome is characterized by short stature, anterior pituitary hormone deficiency, small sella turcica, and a hypoplastic anterior hypophysis associated with pointed cerebellar tonsils. It has been described in three generations of a large French kindred. Ectopia of the posterior hypophysis was observed in some patients. The syndrome is transmitted as a dominantly inherited trait and is caused by a germline mutation within the LIM-homeobox transcription factor LHX4 gene (1q25).","definition_xrefs":["Orphanet:85442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined pituitary hormone deficiencies, genetic form","termid":"MONDO:0013099"},{"relation_name":"is_a","term_name":"non-acquired combined pituitary hormone deficiency","termid":"MONDO:0018762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"short stature-pituitary and cerebellar defects-small sella turcica syndrome","secondary_identifiers":["MEDGEN:394816","MESH:C567492","UMLS:C2678408","GARD:10604","OMIM:262700"],"synonyms":[{"name":"CPHD4","type":"related"},{"name":"pituitary hormone deficiency, combined 4","type":"related"},{"name":"pituitary hormone deficiency, combined with or without cerebellar defects","type":"related"},{"name":"pituitary hormone deficiency, combined, 4","type":"related"},{"name":"pituitary hormone deficiency, combined, type 4","type":"exact"},{"name":"pituitary hormone deficiency, combined, with or without cerebellar defects","type":"related"},{"name":"short stature, pituitary and cerebellar defects and small sella turcica","type":"related"},{"name":"short stature, pituitary and cerebellar defects, and small sella turcica","type":"related"}],"termid":"MONDO:0009880","xrefs":{"Monarch":{"xref_id":"0009880"}}}


id: PBO:0056346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase kinase 4","termid":"PBO:0056346"}


id: GO:0005667
data:
  {"annotated_genes":["SJAG_00934","SJAG_00698","SJAG_03007","SJAG_00159","SJAG_00202","SJAG_04607","SJAG_00987","SJAG_03618","SJAG_01062","SJAG_02472","SJAG_03900","SJAG_00116","SJAG_03120","SJAG_01207","SJAG_00958","SJAG_04368","SJAG_00584","SJAG_03143","SJAG_02815","SJAG_04036","SJAG_00741","SJAG_02458","SJAG_01827","SJAG_02747","SJAG_00735","SJAG_02541","SJAG_04917","SJAG_02311","SJAG_00297","SJAG_03095","SJAG_04852","SJAG_03844","SJAG_00872","SJAG_03546","SJAG_01157","SJAG_04083","SJAG_04381","SJAG_00861","SJAG_03354","SJAG_05247","SJAG_01475","SJAG_04921","SJAG_00290","SJAG_02494","SJAG_00693","SJAG_02255","SJAG_00692","SJAG_02778","SJAG_04977","SJAG_05331","SJAG_01808","SJAG_04420","SJAG_04614","SJAG_04009","SJAG_04274","SJAG_00995","SJAG_05339","SJAG_01728","SJAG_00758","SJAG_02813","SJAG_00904","SJAG_05153","SJAG_03982","SJAG_01710","SJAG_04654","SJAG_00095","SJAG_03206","SJAG_04705","SJAG_00150","SJAG_03107","SJAG_04813","SJAG_03573","SJAG_03285","SJAG_00512","SJAG_00901","SJAG_02849","SJAG_00266","SJAG_04647","SJAG_00421","SJAG_03622","SJAG_04766","SJAG_01771","SJAG_02174","SJAG_02810","SJAG_00585","SJAG_02218"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[78494,91524],"is_not":false,"summary":null,"term":"GO:0005667"},{"annotations":[94560,109802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990243"},{"annotations":[113728,106074,77472,71785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016602"},{"annotations":[71551,79341,103771,77701,80043,76317,79165,75970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070847"},{"annotations":[100696,108831,93065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160051"},{"annotations":[107941,106260,112570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097221"},{"annotations":[77549,79144,108560,79186,110069,105773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030907"},{"annotations":[73080,72230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017054"},{"annotations":[80986,81615,77466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070860"},{"annotations":[97390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000120"},{"annotations":[73828,107102,80924,94986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000500"},{"annotations":[110644,102315,81879,108881],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090575"},{"annotations":[109995,115145,73400,113957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070824"},{"annotations":[80395,73786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005672"},{"annotations":[69632,76699,82082,76181,58180,78584,71636,60015,78455,77314,105433,75389,72379,97391,119427,73107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005669"},{"annotations":[77901,71895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005673"},{"annotations":[71637,80946,82197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005674"},{"annotations":[57488,63171,80462,92068,77904,93983,71877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000439"},{"annotations":[71878,72104,116685,80463,77905,76126,110821,93984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005675"},{"annotations":[79304,97392,73545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000126"},{"annotations":[75484,78225,73570,72856,90000,71546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000127"},{"annotations":[77961,61470,67369],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0070985"}]},"cv_name":"cellular_component","definition":"A protein complex that is capable of associating with DNA by direct binding, or via other DNA-binding proteins or complexes, and regulating transcription.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":86,"genes_by_uniquename":{"SJAG_00095":null,"SJAG_00116":null,"SJAG_00150":null,"SJAG_00159":null,"SJAG_00202":null,"SJAG_00266":null,"SJAG_00290":null,"SJAG_00297":null,"SJAG_00421":null,"SJAG_00512":null,"SJAG_00584":null,"SJAG_00585":null,"SJAG_00692":null,"SJAG_00693":null,"SJAG_00698":null,"SJAG_00735":null,"SJAG_00741":null,"SJAG_00758":null,"SJAG_00861":null,"SJAG_00872":null,"SJAG_00901":null,"SJAG_00904":null,"SJAG_00934":null,"SJAG_00958":null,"SJAG_00987":null,"SJAG_00995":null,"SJAG_01062":null,"SJAG_01157":null,"SJAG_01207":null,"SJAG_01475":null,"SJAG_01710":null,"SJAG_01728":null,"SJAG_01771":null,"SJAG_01808":null,"SJAG_01827":null,"SJAG_02174":null,"SJAG_02218":null,"SJAG_02255":null,"SJAG_02311":null,"SJAG_02458":null,"SJAG_02472":null,"SJAG_02494":null,"SJAG_02541":null,"SJAG_02747":null,"SJAG_02778":null,"SJAG_02810":null,"SJAG_02813":null,"SJAG_02815":null,"SJAG_02849":null,"SJAG_03007":null,"SJAG_03095":null,"SJAG_03107":null,"SJAG_03120":null,"SJAG_03143":null,"SJAG_03206":null,"SJAG_03285":null,"SJAG_03354":null,"SJAG_03546":null,"SJAG_03573":null,"SJAG_03618":null,"SJAG_03622":null,"SJAG_03844":null,"SJAG_03900":null,"SJAG_03982":null,"SJAG_04009":null,"SJAG_04036":null,"SJAG_04083":null,"SJAG_04274":null,"SJAG_04368":null,"SJAG_04381":null,"SJAG_04420":null,"SJAG_04607":null,"SJAG_04614":null,"SJAG_04647":null,"SJAG_04654":null,"SJAG_04705":null,"SJAG_04766":null,"SJAG_04813":null,"SJAG_04852":null,"SJAG_04917":null,"SJAG_04921":null,"SJAG_04977":null,"SJAG_05153":null,"SJAG_05247":null,"SJAG_05331":null,"SJAG_05339":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"transcription regulator complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0044798","GO:0044797"],"synonyms":[{"name":"cytoplasmic transcription factor complex","type":"related"},{"name":"nuclear transcription factor complex","type":"related"},{"name":"transcription factor complex","type":"related"}],"termid":"GO:0005667","terms_by_termid":{"GO:0000120":null,"GO:0000126":null,"GO:0000127":null,"GO:0000439":null,"GO:0000500":null,"GO:0005667":null,"GO:0005669":null,"GO:0005672":null,"GO:0005673":null,"GO:0005674":null,"GO:0005675":null,"GO:0016602":null,"GO:0017054":null,"GO:0030907":null,"GO:0070824":null,"GO:0070847":null,"GO:0070860":null,"GO:0070985":null,"GO:0090575":null,"GO:0097221":null,"GO:0160051":null,"GO:1990243":null}}


id: MONDO:0014233
data:
  {"annotated_genes":["SJAG_04545","SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87585,87586],"is_not":false,"summary":null,"term":"MONDO:0014233"}]},"cv_name":"mondo","definition":"Any Parkinson disease in which the cause of the disease is a mutation in the SYNJ1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"young-onset Parkinson disease","termid":"MONDO:0017279"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00063":null,"SJAG_04545":null},"genotype_count":0,"is_obsolete":false,"name":"early-onset Parkinson disease 20","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:615530","UMLS:C3809824","DOID:0060898","GARD:18462","MEDGEN:816154"],"synonyms":[{"name":"PARK20","type":"related"},{"name":"Parkinson disease 20, early-onset","type":"related"},{"name":"Parkinson disease caused by mutation in SYNJ1","type":"exact"},{"name":"SYNJ1 Parkinson disease","type":"exact"},{"name":"early-onset Parkinson disease type 20","type":"exact"},{"name":"early-onset Parkinson's disease 20","type":"related"}],"termid":"MONDO:0014233","terms_by_termid":{"MONDO:0014233":null},"xrefs":{"Monarch":{"xref_id":"0014233"}}}


id: FYPO:0004654
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell forms a secondary septum that is thinner than normal and does not extend over the entire cell division site.","definition_xrefs":["PomBase:mah","PMID:25473118"],"direct_ancestors":[{"relation_name":"has_part","term_name":"decreased secondary cell septum thickness","termid":"FYPO:0004651"},{"relation_name":"is_a","term_name":"decreased secondary cell septum thickness","termid":"FYPO:0004651"},{"relation_name":"is_a","term_name":"incomplete septum","termid":"FYPO:0005870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000032","FYPO:0000631","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"thin, incomplete secondary cell septum","synonyms":[{"name":"incomplete secondary cell septum with decreased thickness","type":"exact"},{"name":"incomplete secondary cell septum with reduced thickness","type":"exact"},{"name":"thin, discontinuous secondary septum","type":"exact"},{"name":"thin, incomplete secondary cell septum during mitotic cell cycle","type":"related"},{"name":"thin, incomplete secondary cell septum during vegetative growth","type":"exact"},{"name":"thin, incomplete secondary septum","type":"exact"}],"termid":"FYPO:0004654"}


id: GO:0000802
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structural unit of the synaptonemal complex that spans the regions between the lateral elements and connects them.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"synaptonemal complex","termid":"GO:0000795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0005634"],"is_obsolete":false,"name":"transverse filament","termid":"GO:0000802"}


id: PBO:0016956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein New9","termid":"PBO:0016956"}


id: PBO:0065963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD51 recombinase","termid":"PBO:0065963"}


id: MONDO:0003254
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare granular cell tumor that arises from the heart.","definition_xrefs":["NCIT:C5360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign granular cell tumor","termid":"MONDO:0003250"},{"relation_name":"is_a","term_name":"benign neoplasm of epicardium","termid":"MONDO:0021508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiac granular cell neoplasm","secondary_identifiers":["UMLS:C1332845","DOID:5044","MEDGEN:232023"],"synonyms":[{"name":"Cardiac granular cell neoplasm","type":"exact"},{"name":"Cardiac granular cell tumor","type":"exact"},{"name":"Cardiac granular cell tumour","type":"exact"},{"name":"granular cell neoplasm of heart","type":"exact"},{"name":"granular cell neoplasm of the heart","type":"exact"},{"name":"granular cell tumor of heart","type":"exact"},{"name":"granular cell tumor of the heart","type":"exact"},{"name":"granular cell tumour of heart","type":"exact"},{"name":"granular cell tumour of the heart","type":"exact"},{"name":"heart granular cell tumor","type":"exact"},{"name":"heart granular cell tumour","type":"exact"}],"termid":"MONDO:0003254","xrefs":{"Monarch":{"xref_id":"0003254"}}}


id: GO:0071085
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaIIb-beta3 integrin complex bound to the cell surface protein CD9.","definition_xrefs":["PMID:10429193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alphaIIb-beta3 integrin-CD9 complex","synonyms":[{"name":"ITGA2b-ITGB3-CD9 complex","type":"narrow"}],"termid":"GO:0071085"}


id: SO:0002167
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"IsomiRs are all the bona fide variants of a mature product. IsomiRs should be connected to the ref_miRNA it is most likely to be the variant of. Some isomiRs can be variations of one or multiple ref_miRNA.","definition_xrefs":["PMID:26453491"],"direct_ancestors":[{"relation_name":"is_a","term_name":"miRNA","termid":"SO:0000276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isomiR","termid":"SO:0002167"}


id: PBO:0062054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OR2W1 antisense RNA 1","termid":"PBO:0062054"}


id: PBO:0011109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome remodeling protein Spt6","termid":"PBO:0011109"}


id: FYPO:0006495
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA-DNA hybrid molecules is greater than normal at tRNA genes.","definition_xrefs":["PomBase:mah","PMID:29622660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of R-loops","termid":"FYPO:0007901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased number of R-loops at tRNA genes","synonyms":[{"name":"increased RNA-DNA hybrid level at tRNA genes","type":"exact"},{"name":"increased level of DNA:RNA hybrids at tRNA genes","type":"exact"},{"name":"increased level of RNA-DNA hybrids at tDNA","type":"exact"},{"name":"increased level of RNA-DNA hybrids at tRNA genes","type":"exact"},{"name":"increased level of RNA-DNA hybrids at tRNA genes during mitotic cell cycle","type":"related"},{"name":"increased level of RNA-DNA hybrids at tRNA genes during vegetative growth","type":"exact"}],"termid":"FYPO:0006495"}


id: MONDO:0859222
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"visceral heterotaxy","termid":"MONDO:0018677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterotaxy, visceral, 12, autosomal","secondary_identifiers":["UMLS:C5676898","OMIM:619702","MEDGEN:1803695"],"termid":"MONDO:0859222","xrefs":{"Monarch":{"xref_id":"0859222"}}}


id: GO:1903126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of centriole-centriole cohesion.","definition_xrefs":["PMID:24554434","GOC:TermGenie","GO_REF:0000058","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of centriole-centriole cohesion","termid":"GO:0030997"},{"relation_name":"negatively_regulates","term_name":"centriole-centriole cohesion","termid":"GO:0010457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0000226","GO:0007049"],"is_obsolete":false,"name":"negative regulation of centriole-centriole cohesion","synonyms":[{"name":"down regulation of centriole-centriole cohesion","type":"exact"},{"name":"down-regulation of centriole-centriole cohesion","type":"exact"},{"name":"downregulation of centriole-centriole cohesion","type":"exact"},{"name":"inhibition of centriole-centriole cohesion","type":"narrow"}],"termid":"GO:1903126"}


id: MONDO:0005462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm that originates in the neuroectoderm. The neuroectoderm constitutes the portion of the ectoderm of the early embryo that gives rise to the central and peripheral nervous systems and includes some glial cell precursors.","definition_xrefs":["NCIT:C3716"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete germ cell and embryonal cancer (obsolete MONDO:0002510)","termid":"MONDO:0002510"},{"relation_name":"excluded_subClassOf","term_name":"nervous system cancer","termid":"MONDO:0005872"},{"relation_name":"is_a","term_name":"embryonal neoplasm","termid":"MONDO:0005564"},{"relation_name":"is_a","term_name":"neuroepithelial neoplasm","termid":"MONDO:0021193"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primitive neuroectodermal tumor","secondary_identifiers":["ICDO:9473/3","MEDGEN:64627","DOID:171","ICDO:9503/3","UMLS:C0206663","MESH:D017599","EFO:0005235","ONCOTREE:PNET"],"synonyms":[{"name":"PNET","type":"exact"},{"name":"neuroectodermal neoplasm","type":"exact"},{"name":"neuroectodermal tumor","type":"exact"},{"name":"neuroectodermal tumour","type":"exact"},{"name":"neuroepithelioma","type":"related"},{"name":"primitive neuroectodermal neoplasm","type":"exact"},{"name":"primitive neuroectodermal tumor","type":"exact"},{"name":"primitive neuroectodermal tumor (PNET)","type":"exact"},{"name":"primitive neuroectodermal tumour (PNET)","type":"exact"}],"termid":"MONDO:0005462","xrefs":{"Monarch":{"xref_id":"0005462"}}}


id: PBO:0048238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 7","termid":"PBO:0048238"}


id: GO:0003351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, self-propelled movement of cilia of epithelial cells. Depending on the type of cell, there may be one or many cilia per cell. This movement is usually coordinated between many epithelial cells, and serves to move extracellular fluid.","definition_xrefs":["GOC:krc","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium movement","termid":"GO:0003341"},{"relation_name":"is_a","term_name":"extracellular transport","termid":"GO:0006858"},{"relation_name":"is_a","term_name":"microtubule-based transport","termid":"GO:0099111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"epithelial cilium movement involved in extracellular fluid movement","synonyms":[{"name":"cilium movement involved in fluid flow","type":"related"},{"name":"epithelial cilium beating","type":"related"}],"termid":"GO:0003351"}


id: GO:0004527
data:
  {"annotated_genes":["SJAG_01822","SJAG_02275","SJAG_00081","SJAG_04369","SJAG_04587","SJAG_01832","SJAG_04519","SJAG_03734","SJAG_00377","SJAG_01173","SJAG_05197","SJAG_04767","SJAG_04824","SJAG_04006","SJAG_00401","SJAG_01163","SJAG_04410","SJAG_00841","SJAG_02658","SJAG_04153","SJAG_05373","SJAG_01648","SJAG_00814","SJAG_16455","SJAG_05280","SJAG_01836","SJAG_02993","SJAG_04407","SJAG_01431","SJAG_06586","SJAG_04171","SJAG_04818","SJAG_03276","SJAG_04084","SJAG_02374","SJAG_03745","SJAG_03132","SJAG_02908","SJAG_01798","SJAG_03994","SJAG_02540","SJAG_02818","SJAG_00966","SJAG_03876","SJAG_02298"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97214],"is_not":false,"summary":null,"term":"GO:0004527"},{"annotations":[73744,76574,104650,106768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008408"},{"annotations":[77267,76822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008296"},{"annotations":[67868,81199,81454,106230,107098,120188,76331,72366,105489,71671,63799,100758,91795,103907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000175"},{"annotations":[73020,90210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035312"},{"annotations":[80210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008409"},{"annotations":[71732,79648,75240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004534"},{"annotations":[93516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140432"},{"annotations":[78779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033699"},{"annotations":[74933,90367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008311"},{"annotations":[98938,109592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051908"},{"annotations":[116291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008859"},{"annotations":[68900,111800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004528"},{"annotations":[79202,80541,109620,75985,118467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004535"},{"annotations":[70118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990838"},{"annotations":[101435,102859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004532"},{"annotations":[102962,75749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008310"},{"annotations":[74388,98940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045145"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end.","definition_xrefs":["GOC:mah","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease activity","termid":"GO:0004518"},{"relation_name":"is_a","term_name":"hydrolase activity, acting on ester bonds","termid":"GO:0016788"}],"gene_count":45,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00377":null,"SJAG_00401":null,"SJAG_00814":null,"SJAG_00841":null,"SJAG_00966":null,"SJAG_01163":null,"SJAG_01173":null,"SJAG_01431":null,"SJAG_01648":null,"SJAG_01798":null,"SJAG_01822":null,"SJAG_01832":null,"SJAG_01836":null,"SJAG_02275":null,"SJAG_02298":null,"SJAG_02374":null,"SJAG_02540":null,"SJAG_02658":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_02993":null,"SJAG_03132":null,"SJAG_03276":null,"SJAG_03734":null,"SJAG_03745":null,"SJAG_03876":null,"SJAG_03994":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04171":null,"SJAG_04369":null,"SJAG_04407":null,"SJAG_04410":null,"SJAG_04519":null,"SJAG_04587":null,"SJAG_04767":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_05197":null,"SJAG_05280":null,"SJAG_05373":null,"SJAG_06586":null,"SJAG_16455":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"exonuclease activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0008857"],"synonyms":[{"name":"exonuclease IX activity","type":"narrow"}],"termid":"GO:0004527","terms_by_termid":{"GO:0000175":null,"GO:0004527":null,"GO:0004528":null,"GO:0004532":null,"GO:0004534":null,"GO:0004535":null,"GO:0008296":null,"GO:0008310":null,"GO:0008311":null,"GO:0008408":null,"GO:0008409":null,"GO:0008859":null,"GO:0033699":null,"GO:0035312":null,"GO:0045145":null,"GO:0051908":null,"GO:0140432":null,"GO:1990838":null}}


id: MONDO:0007926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Waldenstrom macroglobulinemia (obsolete MONDO:0007926)","termid":"MONDO:0007926","xrefs":{"Monarch":{"xref_id":"0007926"}}}


id: MONDO:0014472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary periodic fever syndrome","termid":"MONDO:0017953"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periodic fever-infantile enterocolitis-autoinflammatory syndrome","secondary_identifiers":["GARD:17725","NANDO:1200994","UMLS:C4015067","MEDGEN:863504","NANDO:2200459","Orphanet:436166","NORD:1939","OMIM:616050"],"synonyms":[{"name":"AIFEC","type":"related"},{"name":"AUTOINFLAMMATION with infantile enterocolitis","type":"related"},{"name":"Autoinflammation with Infantile Enterocolitis","type":"exact"},{"name":"NLRC4-related MAS","type":"exact"},{"name":"NLRC4-related autoinflammatory syndrome with MAS","type":"exact"},{"name":"NLRC4-related autoinflammatory syndrome with macrophage activation syndrome","type":"exact"},{"name":"NLRC4-related infantile enterocolitis-autoinflammatory syndrome","type":"exact"},{"name":"NLRC4-related macrophage activation syndrome","type":"exact"},{"name":"autoinflammation with infantile enterocolitis","type":"exact"}],"termid":"MONDO:0014472","xrefs":{"Monarch":{"xref_id":"0014472"}}}


id: GO:0031453
data:
  {"annotated_genes":["SJAG_00142","SJAG_02342","SJAG_02592","SJAG_02990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100777],"is_not":false,"summary":null,"term":"GO:0031453"},{"annotations":[92997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090053"},{"annotations":[92998,96185,112191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090055"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of heterochromatin formation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heterochromatin formation","termid":"GO:0031445"},{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"positive regulation of chromatin organization","termid":"GO:1905269"},{"relation_name":"positively_regulates","term_name":"heterochromatin formation","termid":"GO:0031507"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_02342":null,"SJAG_02592":null,"SJAG_02990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"positively_regulates","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0044085","GO:0006325","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of heterochromatin formation","type":"narrow"},{"name":"positive regulation of heterochromatin assembly","type":"exact"},{"name":"stimulation of heterochromatin formation","type":"narrow"},{"name":"up regulation of heterochromatin formation","type":"exact"},{"name":"up-regulation of heterochromatin formation","type":"exact"},{"name":"upregulation of heterochromatin formation","type":"exact"}],"termid":"GO:0031453","terms_by_termid":{"GO:0031453":null,"GO:0090053":null,"GO:0090055":null}}


id: PBO:0069665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 942, pseudogene","termid":"PBO:0069665"}


id: PBO:0070359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 34","termid":"PBO:0070359"}


id: MONDO:1012245
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"rod-cone degeneration, non-human animal","termid":"MONDO:1011981"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rod-cone degeneration, domestic cat","secondary_identifiers":["OMIA:000880-9685"],"termid":"MONDO:1012245","xrefs":{"Monarch":{"xref_id":"1012245"}}}


id: GO:0044419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process evolved to enable an interaction with an organism of a different species.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_process","termid":"GO:0008150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"biological process involved in interspecies interaction between organisms","secondary_identifiers":["Reactome:R-HSA-9824443"],"synonyms":[{"name":"interaction with another species","type":"exact"},{"name":"interspecies interaction","type":"exact"},{"name":"interspecies interaction between organisms","type":"exact"},{"name":"interspecies interaction with other organisms","type":"exact"}],"termid":"GO:0044419"}


id: MONDO:0003593
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant adipose tissue neoplasm of the breast.","definition_xrefs":["NCIT:C5187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast sarcoma","termid":"MONDO:0002490"},{"relation_name":"is_a","term_name":"liposarcoma","termid":"MONDO:0005060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"breast liposarcoma","secondary_identifiers":["UMLS:C1332632","MEDGEN:231968","DOID:5701"],"synonyms":[{"name":"breast liposarcoma","type":"exact"},{"name":"liposarcoma of breast","type":"exact"},{"name":"liposarcoma of the breast","type":"exact"}],"termid":"MONDO:0003593","xrefs":{"Monarch":{"xref_id":"0003593"}}}


id: FYPO:0007808
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of valproic acid than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"resistance to valproic acid","synonyms":[{"name":"resistance to valproic acid during mitotic cell cycle","type":"related"},{"name":"resistance to valproic acid during vegetative growth","type":"exact"}],"termid":"FYPO:0007808"}


id: SO:0002260
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Large Retrotransposon Derivative elements are long-terminal repeats that contain reverse transcriptase priming sites and are conserved in sequence but contain no open reading frames encoding typical retrotransposon proteins . The LARDs identified in barley and other Triticeae have LTRs ~5.5 kb and an interal domain of ~3.5 kb. LARDs lack coding domains and thus do not encode proteins.","definition_xrefs":["PMID:15082561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LTR_retrotransposon","termid":"SO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARD","synonyms":[{"name":"Large Retrotransposon Derivative","type":"exact"},{"name":"large_retrotransposon_derivative","type":"exact"}],"termid":"SO:0002260"}


id: MONDO:0012784
data:
  {"annotated_genes":["SJAG_00933"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88096],"is_not":false,"summary":null,"term":"MONDO:0012784"}]},"cv_name":"mondo","definition":"This syndrome is characterized by childhood-onset progressive ataxia and cerebellar atrophy.","definition_xrefs":["Orphanet:139485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"},{"relation_name":"is_a","term_name":"coenzyme Q10 deficiency","termid":"MONDO:0018151"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0004069","MONDO:0006025","MONDO:0005066","MONDO:0005559"],"is_obsolete":false,"name":"autosomal recessive ataxia due to ubiquinone deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C567436","OMIM:612016","MEDGEN:436985","SCTID:725394006","UMLS:C2677589","DOID:0070241","GARD:10294"],"synonyms":[{"name":"ARCA2","type":"exact"},{"name":"COQ10D4","type":"related"},{"name":"SCAR9","type":"exact"},{"name":"autosomal recessive ataxia due to coenzyme Q10 deficiency","type":"exact"},{"name":"autosomal recessive cerebellar ataxia type 2","type":"exact"},{"name":"autosomal recessive spinocerebellar ataxia 9","type":"related"},{"name":"autosomal recessive spinocerebellar ataxia type 9","type":"exact"},{"name":"coenzyme Q10 deficiency, primary, 4","type":"related"},{"name":"coenzyme Q10 deficiency, primary, type 4","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive 9","type":"related"}],"termid":"MONDO:0012784","terms_by_termid":{"MONDO:0012784":null},"xrefs":{"Monarch":{"xref_id":"0012784"}}}


id: PBO:0046697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS1 antisense RNA 1","termid":"PBO:0046697"}


id: GO:0034975
data:
  {"annotated_genes":["SJAG_00403","SJAG_03992","SJAG_02875","SJAG_01038","SJAG_00893","SJAG_03414","SJAG_02301","SJAG_02489","SJAG_00288","SJAG_03030","SJAG_02413","SJAG_04046","SJAG_02032","SJAG_02827","SJAG_05189","SJAG_01160"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73687,81555,90429,92701,94122,94148,97527,98160,104749,104925,105008,107043,111825,111885,115514,120280],"is_not":false,"summary":null,"term":"GO:0034975"}]},"cv_name":"biological_process","definition":"A protein folding process that takes place in the endoplasmic reticulum (ER). Secreted, plasma membrane and organelle proteins are folded in the ER, assisted by chaperones and foldases (protein disulphide isomerases), and additional factors required for optimal folding (ATP, Ca2+ and an oxidizing environment to allow disulfide bond formation).","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein folding","termid":"GO:0006457"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00288":null,"SJAG_00403":null,"SJAG_00893":null,"SJAG_01038":null,"SJAG_01160":null,"SJAG_02032":null,"SJAG_02301":null,"SJAG_02413":null,"SJAG_02489":null,"SJAG_02827":null,"SJAG_02875":null,"SJAG_03030":null,"SJAG_03414":null,"SJAG_03992":null,"SJAG_04046":null,"SJAG_05189":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006457"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0006457","GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"protein folding in endoplasmic reticulum","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"oxidative protein folding","type":"exact"},{"name":"protein folding in ER","type":"exact"}],"termid":"GO:0034975","terms_by_termid":{"GO:0034975":null}}


id: PBO:0091229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dienelactone hydrolase family, implicated in cellular detoxification","termid":"PBO:0091229"}


id: GO:0000454
data:
  {"annotated_genes":["SJAG_01234"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76245],"is_not":false,"summary":null,"term":"GO:0000454"}]},"cv_name":"biological_process","definition":"The intramolecular conversion of uridine to pseudouridine in an rRNA molecule during ribosome biogenesis using a snoRNA guide that targets the position of pseudouridylation.","definition_xrefs":["GOC:curators","ISBN:1555811337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA pseudouridine synthesis","termid":"GO:0031118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01234":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0010467","GO:0044085","GO:0008150","GO:0042254"],"is_obsolete":false,"name":"snoRNA guided rRNA pseudouridine synthesis","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0000454","terms_by_termid":{"GO:0000454":null}}


id: PR:O94681
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03607","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.15c","secondary_identifiers":["UniProtKB:O94681"],"synonyms":[{"name":"2-oxoglutarate dehydrogenase complex component E2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"OGDC-E2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sucB","type":"exact"},{"name":"dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94681"}


id: GO:0001806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An inflammatory response driven by T cell recognition of processed soluble or cell-associated antigens leading to cytokine release and leukocyte activation.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell mediated immunity","termid":"GO:0002456"},{"relation_name":"is_a","term_name":"hypersensitivity","termid":"GO:0002524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type IV hypersensitivity","secondary_identifiers":["Wikipedia:Type_IV_hypersensitivity","GO:0016069"],"synonyms":[{"name":"delayed hypersensitivity response","type":"exact"},{"name":"delayed-type hypersensitivity","type":"exact"}],"termid":"GO:0001806"}


id: MONDO:0009800
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Blount disease","termid":"MONDO:0017194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Blount disease, adolescent","secondary_identifiers":["MEDGEN:462922","OMIM:259200","UMLS:C3151572","GARD:15217"],"synonyms":[{"name":"Blount disease, adolescent","type":"exact"},{"name":"Osteochondrosis deformans tibiae, adolescent","type":"related"},{"name":"tibia vara, adolescent","type":"related"}],"termid":"MONDO:0009800","xrefs":{"Monarch":{"xref_id":"0009800"}}}


id: PBO:0028132
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_microtubule_cytoskeleton_morphology_during_vegetative_growth","termid":"PBO:0028132"}


id: GO:0002079
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The acrosomal membrane region that underlies the acrosomal vesicle and is located toward the sperm nucleus. This region is responsible for molecular interactions allowing the sperm to penetrate the zona pellucida and fuses with the egg plasma membrane.","definition_xrefs":["PMID:8936405","GOC:dph","PMID:3899643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"part_of","term_name":"acrosomal membrane","termid":"GO:0002080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"inner acrosomal membrane","termid":"GO:0002079"}


id: PBO:0068554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 5, pseudogene","termid":"PBO:0068554"}


id: PBO:0068735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5A small nuclear 6, pseudogene","termid":"PBO:0068735"}


id: PBO:0090724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase (NIM1 family) Cdr1/Nim1","termid":"PBO:0090724"}


id: PR:P53693
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rds1 gene.","definition_xrefs":["UniProtKB:P53693","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein rds1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.12","synonyms":[{"name":"Spom972h-rds1","type":"exact"}],"termid":"PR:P53693"}


id: PBO:0001722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA 2'-O-methyltransferase Trm13 (predicted)","termid":"PBO:0001722"}


id: PBO:0039354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylmethionine decarboxylase 1 pseudogene 4","termid":"PBO:0039354"}


id: PBO:0090489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate synthase (GOGAT) Glt1","termid":"PBO:0090489"}


id: MONDO:1011613
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Von Willebrand disease that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Von Willebrand disease, non-human animal","termid":"MONDO:1011411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Von Willebrand disease, domestic cat","secondary_identifiers":["OMIA:001056-9685"],"termid":"MONDO:1011613","xrefs":{"Monarch":{"xref_id":"1011613"}}}


id: FYPO:0001127
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02013:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02013","name":"pyp1delta","uniquename":"SJAG_02013:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_03581:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03581","name":"gef1delta","uniquename":"SJAG_03581:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04280:allele-3":{"allele_type":"amino_acid_mutation","description":"G788E","gene_uniquename":"SJAG_04280","name":"wee1-G788E","uniquename":"SJAG_04280:allele-3"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121161,121149,121079],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0001122"},{"annotations":[121346],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0007701"},{"annotations":[121170,121472,121468,121469],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0000648"},{"annotations":[121470,121477,121471],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0001877"},{"annotations":[121475,121476],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0006616"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell has a volume or dimensions that differ from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell morphology","termid":"FYPO:0000005"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00266":null,"SJAG_02013":null,"SJAG_02592":null,"SJAG_03048":null,"SJAG_03581":null,"SJAG_04280":null,"SJAG_04312":null,"SJAG_04332":null,"SJAG_04522":null},"genotype_count":11,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc2-1w(G146D aa)","display_uniquename":"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03048:allele-1","expression":"Not assayed or wild type"}]}]},"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]},"gef1delta":{"display_name":"gef1delta","display_uniquename":"gef1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03581:allele-1","expression":"Null"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"pyp1delta":{"display_name":"pyp1delta","display_uniquename":"pyp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02013:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga6delta":{"display_name":"rga6delta","display_uniquename":"rga6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00028:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-G788E(aa)","display_uniquename":"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-3","expression":"Not assayed or wild type"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cell size","references_by_uniquename":{"PMID:25866389":null,"PMID:27678009":null,"PMID:30664646":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_03048","SJAG_04522","SJAG_04280","SJAG_00028","SJAG_02013","SJAG_00266","SJAG_02592","SJAG_03581","SJAG_04312","SJAG_04332"],"single_locus_genotype_uniquenames":["rga4delta","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","atf1delta","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","sty1delta","pka1delta","gef1delta","pyp1delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","rga6delta","wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal cell length","type":"narrow"}],"termid":"FYPO:0001127","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000102":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0000648":null,"FYPO:0001122":null,"FYPO:0001877":null,"FYPO:0006616":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: PBO:0027366
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized_actin_cortical_patches","termid":"PBO:0027366"}


id: PBO:0064052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 86","termid":"PBO:0064052"}


id: FYPO:0006986
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin is assembled up to, but not beyond, the IRL boundary element in the silent mating-type cassette, as in wild type.","definition_xrefs":["PomBase:mah","PMID:26518661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal spatial extent of heterochromatin assembly to boundary element IRL","synonyms":[{"name":"normal spatial extent of heterochromatin assembly to boundary element IRL at silent mating type locus","type":"exact"},{"name":"normal spatial extent of heterochromatin assembly to boundary element IRL during mitotic cell cycle","type":"related"},{"name":"normal spatial extent of heterochromatin assembly to boundary element IRL during vegetative growth","type":"exact"}],"termid":"FYPO:0006986"}


id: PBO:0111346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit processome, U3 snoRNP-associated protein Sof1","termid":"PBO:0111346"}


id: PBO:0081555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 474","termid":"PBO:0081555"}


id: PBO:0000268
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.30","termid":"PBO:0000268"}


id: PBO:0081006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 43","termid":"PBO:0081006"}


id: MONDO:0016530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare congenital malformation in the larynx. It is characterized by the presence of an air-filled sac within the laryngeal wall which may bulge on the neck.","definition_xrefs":["NCIT:C97062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngeal disorder","termid":"MONDO:0004382"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laryngocele","secondary_identifiers":["SCTID:51523009","UMLS:C0265761","Orphanet:2372","ICD10CM:Q31.3","MESH:D059608","GARD:3191","ICD9:748.3","icd11.foundation:360056769","MedDRA:10023885","MEDGEN:452345"],"termid":"MONDO:0016530","xrefs":{"Monarch":{"xref_id":"0016530"}}}


id: PBO:0059497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"misato family member 2, pseudogene","termid":"PBO:0059497"}


id: GO:0050823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in maintaining the structure and integrity of a peptide antigen and preventing it from being degraded.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide stabilization","termid":"GO:0050822"},{"relation_name":"part_of","term_name":"antigen processing and presentation of peptide antigen","termid":"GO:0048002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide antigen stabilization","synonyms":[{"name":"peptide antigen stabilization activity","type":"related"}],"termid":"GO:0050823"}


id: MONDO:0009971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infant acute respiratory distress syndrome is a lung disorder that affects premature infants caused by developmental insufficiency of surfactant production and structural immaturity of the lungs. The symptoms usually appear shortly after birth and may include tachypnea, tachycardia, chest wall retractions (recession), expiratory grunting, nasal flaring and cyanosis during breathing efforts.","definition_xrefs":["Orphanet:70587"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"acute respiratory failure","termid":"MONDO:0001208"},{"relation_name":"is_a","term_name":"newborn respiratory distress syndrome","termid":"MONDO:0700081"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"respiratory distress syndrome in premature infants","secondary_identifiers":["OMIM:267450","UMLS:C1968593","NORD:1659","MEDGEN:368840","GARD:112","icd11.foundation:343716587","MESH:C566881"],"synonyms":[{"name":"IRDS","type":"related"},{"name":"NRDS","type":"related"},{"name":"RDS","type":"broad"},{"name":"RDS - infants","type":"related"},{"name":"RDS of prematurity","type":"exact"},{"name":"Respiratory Distress Syndrome, Infant","type":"exact"},{"name":"hyaline Membrane disease","type":"related"},{"name":"hyaline Membrane disease, formerly","type":"related"},{"name":"infantile respiratory distress syndrome","type":"related"},{"name":"respiratory distress syndrome","type":"broad"},{"name":"respiratory distress syndrome in premature infants","type":"exact"},{"name":"respiratory distress syndrome, infant","type":"related"}],"termid":"MONDO:0009971","xrefs":{"Monarch":{"xref_id":"0009971"}}}


id: GO:0046779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any viral process that discriminates against and subsequently inhibits host transcripts containing introns, thus allowing only intronless viral mRNA to be fully processed.","definition_xrefs":["PMID:11598019"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of expression of host genes with introns (obsolete GO:0046779)","synonyms":[{"name":"negative regulation by virus of expression of host genes with introns","type":"exact"},{"name":"viral inhibition of expression of host genes with introns","type":"exact"}],"termid":"GO:0046779"}


id: PBO:0083312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF CCT2/YIL142W","termid":"PBO:0083312"}


id: PBO:0053435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 380","termid":"PBO:0053435"}


id: MONDO:0020801
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, invasive rectal adenocarcinoma characterized by the presence of sheets of malignant epithelial cells with vesicular nuclei, prominent nucleoli, and abundant eosinophilic cytoplasm. It usually has a favorable prognosis.","definition_xrefs":["NCIT:C60640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rectum adenocarcinoma","termid":"MONDO:0002169"},{"relation_name":"is_a","term_name":"colorectal medullary carcinoma","termid":"MONDO:0020794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"rectal medullary carcinoma","secondary_identifiers":["UMLS:C1882915","MEDGEN:364314"],"synonyms":[{"name":"rectal medullary carcinoma","type":"exact"}],"termid":"MONDO:0020801","xrefs":{"Monarch":{"xref_id":"0020801"}}}


id: GO:0070744
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is composed of an interleukin-27p28 subunit (product of the IL27 gene) and an EBI3 subunit and is secreted into the extracellular space.","definition_xrefs":["PMID:15999093","GOC:add","PMID:19161428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005576"],"is_obsolete":false,"name":"interleukin-27 complex","synonyms":[{"name":"EBI3","type":"narrow"},{"name":"IL-27 complex","type":"exact"},{"name":"IL27","type":"narrow"},{"name":"p28","type":"narrow"}],"termid":"GO:0070744"}


id: GO:0009346
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Citrate lyase is a multienzyme complex with three constituents: the alpha subunit, citrate-ACP transferase; the beta subunit, citryl-ACP lyase; and the gamma subunit, an acyl-carrier protein which also carries the prosthetic group components. All three subunits are required for citrate lyase enzyme activity. This enzyme has only been found in bacteria.","definition_xrefs":["PMID:32302313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"ATP-independent citrate lyase complex","secondary_identifiers":["MetaCyc:ACECITLY-CPLX"],"synonyms":[{"name":"citrate lyase complex","type":"broad"},{"name":"citrate synthase complex","type":"broad"}],"termid":"GO:0009346"}


id: PBO:0041987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 30","termid":"PBO:0041987"}


id: GO:0014721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within twitch skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The twitch skeletal muscle responds to neurostimulations with a contraction followed by a relaxation.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voluntary skeletal muscle contraction","termid":"GO:0003010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"twitch skeletal muscle contraction","termid":"GO:0014721"}


id: GO:0071373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a luteinizing hormone stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to luteinizing hormone","termid":"GO:0034699"},{"relation_name":"is_a","term_name":"cellular response to gonadotropin stimulus","termid":"GO:0071371"},{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to luteinizing hormone stimulus","termid":"GO:0071373"}


id: PBO:0043670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q10B pseudogene 2","termid":"PBO:0043670"}


id: PBO:0116701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD(P) dependent 3-beta-hydroxysteroid dehydrogenase NSDHL","termid":"PBO:0116701"}


id: GO:0018521
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,6-dihydroxy-2-methylcyclohexa-2,4-dienecarboxylate + NAD+ = 3-methylcatechol + CO2 + NADH.","definition_xrefs":["RHEA:15657","EC:1.3.1.68"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"1,2-dihydroxy-6-methylcyclohexa-3,5-dienecarboxylate dehydrogenase activity","secondary_identifiers":["MetaCyc:1.3.1.68-RXN","KEGG_REACTION:R05314","UM-BBD_reactionID:r0224"],"synonyms":[{"name":"1,2-dihydroxy-6-methylcyclohexa-3,5-dienecarboxylate:NAD+ oxidoreductase (decarboxylating)","type":"related"}],"termid":"GO:0018521"}


id: internal:is_a
data:
  {"annotation_feature_type":"gene","cv_name":"autocreated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_a","termid":"internal:is_a"}


id: GO:0003880
data:
  {"annotated_genes":["SJAG_02660","SJAG_05016"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0018423"},{"annotations":[77172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004671"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group to the oxygen atom of a carboxyl group at the C-terminal of a protein.","definition_xrefs":["PMID:8428937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein carboxyl O-methyltransferase activity","termid":"GO:0051998"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02660":null,"SJAG_05016":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008276"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0008276","GO:0140096","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"protein C-terminal carboxyl O-methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"C-terminal protein carboxyl methyltransferase activity","type":"exact"}],"termid":"GO:0003880","terms_by_termid":{"GO:0004671":null,"GO:0018423":null}}


id: PBO:0066955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 257","termid":"PBO:0066955"}


id: PBO:0043462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT transcription complex subunit 3","termid":"PBO:0043462"}


id: GO:0034014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a triglyceride stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to triglyceride","synonyms":[{"name":"response to triacylglyceride","type":"exact"},{"name":"response to triacylglycerol","type":"exact"}],"termid":"GO:0034014"}


id: PBO:0074163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member F6","termid":"PBO:0074163"}


id: PBO:0031015
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_vanadate","termid":"PBO:0031015"}


id: GO:0001186
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The function of binding to an RNA polymerase I (RNAP I) transcription regulator and recruiting it to the general transcription machinery complex in order to modulate transcription initiation.","definition_xrefs":["PMID:8057832","PMID:12381659","PMID:14969726","GOC:txnOH-2018"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase I transcription regulator recruiting activity (obsolete GO:0001186)","synonyms":[{"name":"RNA polymerase I transcription factor recruiting activity","type":"exact"},{"name":"RNA polymerase I transcription factor recruiting transcription factor activity","type":"exact"},{"name":"transcription factor activity, RNA polymerase I transcription factor recruiting","type":"related"}],"termid":"GO:0001186"}


id: GO:0090262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the nucleotide-excision repair process that carries out preferential repair of DNA lesions on the actively transcribed strand of the DNA duplex. In addition, the transcription-coupled nucleotide-excision repair pathway is required for the recognition and repair of a small subset of lesions that are not recognized by the global genome nucleotide excision repair pathway.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleotide-excision repair","termid":"GO:2000819"},{"relation_name":"regulates","term_name":"transcription-coupled nucleotide-excision repair","termid":"GO:0006283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006281","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of transcription-coupled nucleotide-excision repair","termid":"GO:0090262"}


id: PBO:0067092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 128, pseudogene","termid":"PBO:0067092"}


id: PR:Q09748
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dnm1 gene.","definition_xrefs":["UniProtKB:Q09748","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin-related protein dnm1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12C2.08","synonyms":[{"name":"Spom972h-dnm1","type":"exact"}],"termid":"PR:Q09748"}


id: MONDO:0008170
data:
  {"annotated_genes":["SJAG_02426","SJAG_04206","SJAG_04394"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88286,88287,88288],"is_not":false,"summary":null,"term":"MONDO:0008170"}]},"cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm involving the ovary. Most primary malignant ovarian neoplasms are either carcinomas (serous, mucinous, or endometrioid adenocarcinomas) or malignant germ cell tumors. Metastatic malignant neoplasms to the ovary include carcinomas, lymphomas, and melanomas.","definition_xrefs":["NCIT:C7431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive organ cancer","termid":"MONDO:0001416"},{"relation_name":"is_a","term_name":"ovarian neoplasm","termid":"MONDO:0021068"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02426":null,"SJAG_04206":null,"SJAG_04394":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:216027","DOID:2394","ICD10CM:C56","ICD9:183.0","MESH:D010051","SCTID:363443007","UMLS:C1140680","OMIM:167000","icd11.foundation:685124533","Orphanet:213500","GARD:7295"],"synonyms":[{"name":"cancer of ovary","type":"exact"},{"name":"cancer of the ovary","type":"exact"},{"name":"malignant neoplasm of ovary","type":"exact"},{"name":"malignant neoplasm of the ovary","type":"exact"},{"name":"malignant ovarian neoplasm","type":"exact"},{"name":"malignant ovarian tumor","type":"exact"},{"name":"malignant ovarian tumour","type":"exact"},{"name":"malignant ovary neoplasm","type":"exact"},{"name":"malignant tumor of ovary","type":"exact"},{"name":"malignant tumor of the ovary","type":"exact"},{"name":"malignant tumour of ovary","type":"exact"},{"name":"malignant tumour of the ovary","type":"exact"},{"name":"ovarian cancer","type":"exact"},{"name":"ovarian cancer, epithelial","type":"related"},{"name":"ovarian cancer, somatic","type":"exact"},{"name":"ovarian malignant tumor","type":"exact"},{"name":"ovarian malignant tumour","type":"exact"},{"name":"ovarian neoplasm","type":"broad"},{"name":"ovary cancer","type":"exact"},{"name":"ovary neoplasm","type":"broad"},{"name":"primary ovarian cancer","type":"related"},{"name":"tumor of the ovary","type":"broad"},{"name":"tumour of the ovary","type":"broad"}],"termid":"MONDO:0008170","terms_by_termid":{"MONDO:0008170":null},"xrefs":{"Monarch":{"xref_id":"0008170"}}}


id: MONDO:0000730
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pontocerebellar hypoplasia (obsolete MONDO:0000730)","termid":"MONDO:0000730","xrefs":{"Monarch":{"xref_id":"0000730"}}}


id: FYPO:0004148
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of pyridoxamine-phosphate oxidase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000654"],"is_obsolete":false,"name":"normal pyridoxamine-phosphate oxidase activity","termid":"FYPO:0004148"}


id: GO:0016708
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from NADH or NADPH and one other donor, and two atoms of oxygen are incorporated into one donor.","definition_xrefs":["EC:1.14.12.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"},{"relation_name":"is_a","term_name":"dioxygenase activity","termid":"GO:0051213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","synonyms":[{"name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of two atoms of oxygen into one donor","type":"related"}],"termid":"GO:0016708"}


id: MONDO:0012828
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial atrial fibrillation in which the cause of the disease is a mutation in the KCNA5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial atrial fibrillation","termid":"MONDO:0018054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial fibrillation, familial, 7","secondary_identifiers":["UMLS:C2677106","MEDGEN:393658","MESH:C567389","OMIM:612240","GARD:15545"],"synonyms":[{"name":"ATFB7","type":"related"},{"name":"KCNA5 familial atrial fibrillation","type":"exact"},{"name":"atrial fibrillation, familial, 7","type":"exact"},{"name":"atrial fibrillation, familial, type 7","type":"exact"},{"name":"familial atrial fibrillation caused by mutation in KCNA5","type":"exact"}],"termid":"MONDO:0012828","xrefs":{"Monarch":{"xref_id":"0012828"}}}


id: PBO:0088212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase","termid":"PBO:0088212"}


id: MONDO:0012675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Corticosteroid-binding globulin deficiency is a genetic disorder characterized by extreme tiredness (fatigue), particularly after physical exertion, and low blood pressure (hypotension). Corticosteroid-binding globulin (CBG) is a protein primarily produced in the liver that attaches to cortisol, a hormone with numerous functions, including maintaining blood sugar levels, protecting the body from stress, and suppressing inflammation.When cortisol is needed in the body, CBG delivers the cortisol where it is needed and releases it. Signs and symptoms of CBG deficiency vary. While some individuals may experience no symptoms, others are found to have a fatty liver and chronic pain. Some people with CBG deficiency also have chronic fatigue syndrome. CGB deficiency is caused by mutations in the SERPINA6 gene. The SERPINA6 gene is commonly also referred to as the CBG gene. Both autosomal dominant and autosomal recessive inheritance have been reported.While there is still no cure, treatment options will depend on the type and severity of symptoms present and may involve several specialists.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"adrenal gland disorder","termid":"MONDO:0005495"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corticosteroid-binding globulin deficiency","secondary_identifiers":["GARD:13101","MEDGEN:343831","UMLS:C1852529","OMIM:611489","DOID:0090030","Orphanet:199247"],"synonyms":[{"name":"CBG deficiency","type":"exact"},{"name":"Cbg deficiency","type":"related"},{"name":"Transcortin deficiency","type":"exact"},{"name":"corticosteroid-binding globulin deficiency","type":"exact"},{"name":"corticosteroid-binding globulin, elevated","type":"related"},{"name":"transcortin deficiency","type":"exact"}],"termid":"MONDO:0012675","xrefs":{"Monarch":{"xref_id":"0012675"}}}


id: MONDO:0015155
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spotted fever rickettsiosis (obsolete MONDO:0015155)","termid":"MONDO:0015155","xrefs":{"Monarch":{"xref_id":"0015155"}}}


id: PBO:0061242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP56 ribonucleoprotein pseudogene 3","termid":"PBO:0061242"}


id: GO:1901423
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a benzene stimulus.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to benzene","termid":"GO:1901423"}


id: PBO:0074667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 53","termid":"PBO:0074667"}


id: PBO:0055150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2569","termid":"PBO:0055150"}


id: GO:0052206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of a second organism, mediated by a substance secreted by a type II secretion system in the first organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification of morphology or physiology of other organism via protein secreted by type II secretion system involved in symbiotic interaction (obsolete GO:0052206)","synonyms":[{"name":"modification of morphology or physiology of other organism via protein secreted by type II secretion system during symbiotic interaction","type":"related"}],"termid":"GO:0052206"}


id: PBO:0071051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 53","termid":"PBO:0071051"}


id: GO:2000884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a glucomannan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide catabolic process","termid":"GO:0000272"},{"relation_name":"is_a","term_name":"glucomannan metabolic process","termid":"GO:0010391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"glucomannan catabolic process","synonyms":[{"name":"glucomannan catabolism","type":"exact"}],"termid":"GO:2000884"}


id: PBO:0082683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the ESCRT-II complex; ESCRT-II is involved in ubiquitin-dependent sorting of proteins into the endosome; appears to be functionally related to SNF7; involved in glucose derepression","termid":"PBO:0082683"}


id: PBO:0086330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with WD-40 repeats involved in rRNA processing; associates with rDNA chromatin in H4-tail-dependent manner; associates with trans-acting ribosome biogenesis factors; similar to beta-transducin superfamily","termid":"PBO:0086330"}


id: GO:0055077
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A wide pore channel activity that enables the transport of a solute across a membrane via a gap junction hemi-channel. Two gap junction hemi-channels coupled together form a complete gap junction.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"wide pore channel activity","termid":"GO:0022829"},{"relation_name":"part_of","term_name":"gap junction channel activity","termid":"GO:0005243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"part_of","termid":"GO:0022857"},{"rel_name":"part_of","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"gap junction hemi-channel activity","synonyms":[{"name":"connexon channel activity","type":"exact"}],"termid":"GO:0055077"}


id: PBO:0042065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 134","termid":"PBO:0042065"}


id: PBO:0087031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L15A; binds to 5.8 S rRNA; homologous to mammalian ribosomal protein L15, no bacterial homolog; RPL15A has a paralog, RPL15B, that arose from the whole genome duplication","termid":"PBO:0087031"}


id: RO:HOM0000017
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Historical homology that involves genes that diverged after a speciation event.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_historical_homology_relationship_with","termid":"RO:HOM0000007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_orthology_relationship_with","synonyms":[{"name":"orthologous to","type":"exact"}],"termid":"RO:HOM0000017"}


id: FYPO:0003100
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin assembly is normal (i.e. indistinguishable from wild type) in regions containing protein-coding genes. Heterochromatin assembly is the assembly of chromatin into a compact and highly condensed form that is often, but not always, transcriptionally silent.","definition_xrefs":["GO:0031507","PMID:24095277","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal heterochromatin assembly","termid":"FYPO:0003099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal heterochromatin assembly at protein coding gene","synonyms":[{"name":"normal heterochromatin assembly at protein coding gene during mitotic cell cycle","type":"related"},{"name":"normal heterochromatin assembly at protein coding gene during vegetative growth","type":"exact"},{"name":"normal heterochromatin assembly at protein-coding gene","type":"exact"},{"name":"normal heterochromatin formation at protein coding gene","type":"exact"}],"termid":"FYPO:0003100"}


id: PBO:0078765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA mitochondrial 2-thiouridylase","termid":"PBO:0078765"}


id: PR:O42646
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubc6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-conjugating enzyme E2 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.05c","synonyms":[{"name":"E2 ubiquitin-conjugating enzyme 6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ubc6","type":"exact"},{"name":"ubiquitin carrier protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-protein ligase 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42646"}


id: GO:0050911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in the perception of smell in which an olfactory chemical stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus involved in sensory perception","termid":"GO:0050907"},{"relation_name":"part_of","term_name":"sensory perception of smell","termid":"GO:0007608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of chemical stimulus involved in sensory perception of smell","synonyms":[{"name":"perception of smell, detection of chemical stimulus","type":"exact"},{"name":"perception of smell, sensory detection of chemical stimulus","type":"exact"},{"name":"perception of smell, sensory transduction of chemical stimulus","type":"exact"},{"name":"sensory detection of chemical stimulus during perception of smell","type":"exact"},{"name":"sensory detection of scent","type":"exact"},{"name":"sensory detection of smell","type":"exact"},{"name":"sensory transduction of chemical stimulus during perception of smell","type":"exact"},{"name":"sensory transduction of scent","type":"exact"},{"name":"sensory transduction of smell","type":"exact"}],"termid":"GO:0050911"}


id: PATO:0001425
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color hue consisting of red hue and yellow hue and high brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rosy","termid":"PATO:0001425"}


id: GO:0008359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the process in which bicoid mRNA is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular mRNA localization","termid":"GO:1904580"},{"relation_name":"regulates","term_name":"bicoid mRNA localization","termid":"GO:0045450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of bicoid mRNA localization","synonyms":[{"name":"regulation of bicoid mRNA localisation","type":"exact"}],"termid":"GO:0008359"}


id: MONDO:0018608
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pure autonomic failure (PAF) is a neurodegenerative disease that affects the sympathetic branch of the autonomous nervous system and that manifests with orthostatic hypotension.","definition_xrefs":["Orphanet:441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autonomic nervous system disorder","termid":"MONDO:0001292"},{"relation_name":"is_a","term_name":"multiple system atrophy","termid":"MONDO:0007803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0021179","MONDO:0005559","MONDO:0005066"],"is_obsolete":false,"name":"pure autonomic failure","secondary_identifiers":["MEDGEN:98293","MESH:D054970","SCTID:84438001","NORD:1948","UMLS:C0393911","GARD:10428","icd11.foundation:734022291"],"synonyms":[{"name":"Bradbury Eggleston syndrome","type":"exact"},{"name":"Bradbury-Eggleston syndrome","type":"exact"},{"name":"PAF","type":"exact"},{"name":"Pure dysautonomia","type":"exact"},{"name":"Pure idiopatic dysautonomia","type":"exact"},{"name":"idiopathic orthostatic hypotension","type":"exact"},{"name":"idiopathic orthostatic hypotension (a symptom)","type":"related"},{"name":"orthostatic hypotension (a symptom)","type":"related"}],"termid":"MONDO:0018608","xrefs":{"Monarch":{"xref_id":"0018608"}}}


id: FYPO:0004502
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which positive regulation of an ATPase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal regulation of catalytic activity","termid":"FYPO:0004920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal positive regulation of ATPase activity","synonyms":[{"name":"normal positive regulation of ATPase activity during mitotic cell cycle","type":"exact"},{"name":"normal positive regulation of ATPase activity during vegetative growth","type":"exact"}],"termid":"FYPO:0004502"}


id: MONDO:0002788
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A craniopharyngioma composed of sheets of squamous epithelium which separate to form pseudopapillae. This variant typically lacks nuclear palisading, wet keratin, calcification, and cholesterol deposits. Clinically, endocrine deficiencies are more often associated with papillary craniopharyngioma than with the adamantinomatous type. (Adapted from WHO)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"craniopharyngioma","termid":"MONDO:0018907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papillary craniopharyngioma","secondary_identifiers":["UMLS:C0431128","NCIT:C4725","DOID:3847","MEDGEN:98125","ICDO:9352/1"],"synonyms":[{"name":"craniopharyngioma, papillary","type":"exact"},{"name":"craniopharyngioma, papillary (morphologic abnormality)","type":"exact"},{"name":"papillary Rathke pouch neoplasm","type":"exact"},{"name":"papillary Rathke's pouch neoplasm","type":"exact"},{"name":"papillary Rathke's pouch tumor","type":"exact"},{"name":"papillary Rathke's pouch tumour","type":"exact"},{"name":"papillary craniopharyngioma (morphologic abnormality)","type":"exact"},{"name":"papillary neoplasm of Rathke's pouch","type":"exact"},{"name":"papillary tumor of Rathke's pouch","type":"exact"},{"name":"papillary tumour of Rathke's pouch","type":"exact"}],"termid":"MONDO:0002788","xrefs":{"Monarch":{"xref_id":"0002788"}}}


id: PBO:0039311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkB homolog 5, RNA demethylase","termid":"PBO:0039311"}


id: PBO:0058982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mixed lineage kinase domain like pseudokinase","termid":"PBO:0058982"}


id: PBO:0043529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cordon-bleu WH2 repeat protein","termid":"PBO:0043529"}


id: RO:0002506
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"RO:0002410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causal_relation_between_material_entities","termid":"RO:0002506"}


id: PBO:0066103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RasGEF domain family member 1A","termid":"PBO:0066103"}


id: GO:0036270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a diuretic stimulus. A diuretic is an agent that promotes the excretion of urine through its effects on kidney function.","definition_xrefs":["GOC:hp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to diuretic","termid":"GO:0036270"}


id: PBO:0000052
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally repressed by Taz1","termid":"PBO:0000052"}


id: MONDO:0700104
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Respiratory system disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"respiratory system disorder, non-human animal","termid":"MONDO:0700104","xrefs":{"Monarch":{"xref_id":"0700104"}}}


id: GO:0047641
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucitol 6-phosphate + NADP+ = D-glucose 6-phosphate + H+ + NADPH.","definition_xrefs":["EC:1.1.1.200","RHEA:20037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"aldose-6-phosphate reductase (NADPH) activity","secondary_identifiers":["KEGG_REACTION:R00834","MetaCyc:ALDOSE-6-PHOSPHATE-REDUCTASE-NADPH-RXN"],"synonyms":[{"name":"A6PR","type":"related"},{"name":"D-aldose-6-phosphate:NADP+ 1-oxidoreductase activity","type":"related"},{"name":"NADP-dependent D-sorbitol-6-phosphate dehydrogenase activity","type":"related"},{"name":"NADP-dependent aldose 6-phosphate reductase activity","type":"related"},{"name":"alditol 6-phosphate:NADP 1-oxidoreductase activity","type":"related"},{"name":"aldose 6-phosphate reductase activity","type":"related"},{"name":"aldose-6-P reductase activity","type":"related"},{"name":"aldose-6-phosphate reductase activity","type":"related"}],"termid":"GO:0047641"}


id: PBO:0054720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2129","termid":"PBO:0054720"}


id: PBO:0005337
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial disorders","termid":"PBO:0005337"}


id: MONDO:0012866
data:
  {"annotated_genes":["SJAG_04913"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88854],"is_not":false,"summary":null,"term":"MONDO:0012866"}]},"cv_name":"mondo","definition":"Autosomal recessive spastic paraplegia type 35 is a rare form of hereditary spastic paraplegia characterized by childhood (exceptionally adolescent) onset of a complex phenotype presenting with lower limb (followed by upper limb) spasticity with hyperreflexia and extensor plantar responses, with additional manifestations including progressive dysarthria, dystonia, mild cognitive decline, extrapyramidal features, optic atrophy and seizures. White matter abnormalities and brain iron accumulation have also been observed on brain magnetic resonance imaging.","definition_xrefs":["Orphanet:171629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04913":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 35","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:612319","NANDO:1200541","GARD:10538","MEDGEN:501249","MESH:C567311","SCTID:764688002","UMLS:C3496228","DOID:0110786"],"synonyms":[{"name":"FA2H hereditary spastic paraplegia","type":"exact"},{"name":"SPG35","type":"exact"},{"name":"autosomal recessive spastic paraplegia 35","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 35","type":"exact"},{"name":"hereditary spastic paraplegia 35","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in FA2H","type":"exact"},{"name":"hereditary spastic paraplegia type 35","type":"exact"},{"name":"leukodystrophy, dysmyelinating and spastic paraparesis with or without dystonia","type":"exact"},{"name":"leukodystrophy, dysmyelinating, and spastic paraparesis with or without dystonia","type":"related"},{"name":"spastic paraplegia 35, autosomal recessive","type":"related"}],"termid":"MONDO:0012866","terms_by_termid":{"MONDO:0012866":null},"xrefs":{"Monarch":{"xref_id":"0012866"}}}


id: PR:Q8NIL4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB21E7.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q8NIL4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB21E7.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB21E7.05","synonyms":[{"name":"Spom972h-SPBPB21E7.05","type":"exact"}],"termid":"PR:Q8NIL4"}


id: PBO:0073103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex subunit D pseudogene 7","termid":"PBO:0073103"}


id: PATO:0000512
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000512 relative disease sensitivity value (obsolete PATO:0000512)","termid":"PATO:0000512"}


id: PBO:0035796
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_ribosomal_S6_protein_phosphorylation_during_vegetative_growth","termid":"PBO:0035796"}


id: PBO:0040886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein 8b","termid":"PBO:0040886"}


id: PBO:0069293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 549, pseudogene","termid":"PBO:0069293"}


id: PBO:0060749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B2 pseudogene 2","termid":"PBO:0060749"}


id: PBO:0075497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 42","termid":"PBO:0075497"}


id: PBO:0085361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoprotein of the mRNA cap-binding complex; involved in translational control; repressor of cap-dependent translational initiation; translational activator of select mRNAs during filamentous growth; competes with eIF4G for binding to eIF4E","termid":"PBO:0085361"}


id: FYPO:0004613
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the spindle pole body is not attached to any interphase cytoplasmic microtubules; as a result, the microtubules are not connected to the nucleus. Normally, the spindle pole body is attached to at least one cytoplasmic microtubule bundle.","definition_xrefs":["PomBase:vw","PMID:15772152","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body morphology","termid":"FYPO:0001474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abolished microtubule attachment to spindle pole body","synonyms":[{"name":"SPB detached from cytoplasmic microtubules","type":"exact"},{"name":"abolished microtubule attachment to nucleus","type":"broad"},{"name":"abolished microtubule attachment to spindle pole body during mitotic cell cycle","type":"related"},{"name":"abolished microtubule attachment to spindle pole body during vegetative growth","type":"exact"},{"name":"cytoplasmic microtubules absent from mitotic spindle pole body","type":"exact"},{"name":"cytoplasmic microtubules detached from spindle pole body","type":"exact"},{"name":"interphase microtubules detached from nucleus","type":"exact"},{"name":"interphase microtubules detached from spindle pole body","type":"exact"},{"name":"spindle pole body detached from cytoplasmic microtubules","type":"exact"}],"termid":"FYPO:0004613"}


id: MONDO:0010255
data:
  {"annotated_genes":["SJAG_03843"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010863"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03843":null},"genotype_count":0,"is_obsolete":false,"name":"diabetes mellitus, insulin-dependent, X-linked, susceptibility to","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1848042","OMIM:300136","MEDGEN:338376"],"synonyms":[{"name":"Iddmx","type":"related"},{"name":"diabetes mellitus, insulin-dependent, X-linked","type":"exact"},{"name":"diabetes mellitus, insulin-dependent, X-linked, susceptibility to","type":"exact"},{"name":"insulin-dependent diabetes mellitus, X-linked, susceptibility to","type":"related"}],"termid":"MONDO:0010255","terms_by_termid":{"MONDO:0010863":null},"xrefs":{"Monarch":{"xref_id":"0010255"}}}


id: PBO:0082270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMP-activated S/T protein kinase; complexes with Snf4p and a Sip1p/Sip2p/Gal83p family member; required for glucose-repressed gene transcription, heat shock, sporulation, and peroxisome biogenesis; active form involved in mitotic spindle alignment in non-limiting glucose; regulates Hxk2p nucleocytoplasmic shuttling; regulates filamentous growth and acts as a non-canonical GEF-activating Arf3p during invasive growth; sumoylation inhibits Snf1p, targeting it for Ub-ligase mediated destruction","termid":"PBO:0082270"}


id: MONDO:1010359
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Night blindness that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"night blindness, non-human animal","secondary_identifiers":["OMIA:002580"],"termid":"MONDO:1010359","xrefs":{"Monarch":{"xref_id":"1010359"}}}


id: GO:0033038
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with soluble bitter compounds to initiate a change in cell activity. These receptors are responsible for the sense of bitter taste.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"taste receptor activity","termid":"GO:0008527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"bitter taste receptor activity","termid":"GO:0033038"}


id: PBO:0065033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolactin regulatory element binding","termid":"PBO:0065033"}


id: PBO:0027922
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_cell-cell_contact_point_during_conjugation","termid":"PBO:0027922"}


id: GO:0098947
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic endocytic zone membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of postsynaptic endocytic zone membrane (obsolete GO:0098947)","synonyms":[{"name":"intrinsic to postsynaptic active zone membrane","type":"narrow"}],"termid":"GO:0098947"}


id: MONDO:0800409
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventricular fibrillation during myocardial infarction, susceptibility to","secondary_identifiers":["UMLS:C4017668","MEDGEN:866105"],"termid":"MONDO:0800409","xrefs":{"Monarch":{"xref_id":"0800409"}}}


id: GO:0047188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-hydroxy-4-aminobiphenyl + N-hydroxy-4-acetylaminonbiphenyl = N-acetoxy-4-aminobiphenyl + N-hydroxy-4-aminobiphenyl.","definition_xrefs":["EC:2.3.1.56","MetaCyc:2.3.1.56-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"aromatic-hydroxylamine O-acetyltransferase activity","secondary_identifiers":["RHEA:20325"],"synonyms":[{"name":"N,O-acetyltransferase activity","type":"related"},{"name":"N-hydroxy-2-acetylaminofluorene N-O acyltransferase activity","type":"related"},{"name":"N-hydroxy-4-acetylaminobiphenyl:N-hydroxy-4-aminobiphenyl O-acetyltransferase activity","type":"related"},{"name":"aromatic hydroxylamine acetyltransferase activity","type":"related"},{"name":"arylhydroxamate acyltransferase activity","type":"related"},{"name":"arylhydroxamic acid N,O-acetyltransferase activity","type":"related"},{"name":"arylhydroxamic acyltransferase activity","type":"related"}],"termid":"GO:0047188"}


id: PBO:0069934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1227, pseudogene","termid":"PBO:0069934"}


id: GO:0046538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (2R)-2-phosphoglycerate = (2R)-3-phosphoglycerate; this reaction mechanism uses 2,3-bisphosphoglycerate as a phosphate donor.","definition_xrefs":["GOC:rynl"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity (obsolete GO:0046538)","termid":"GO:0046538"}


id: GO:0006362
data:
  {"annotated_genes":["SJAG_01313","SJAG_04261","SJAG_00731","SJAG_02101","SJAG_04106","SJAG_01765","SJAG_01698","SJAG_01444","SJAG_02871","SJAG_02653","SJAG_01128","SJAG_03144","SJAG_03578","SJAG_01562","SJAG_02070","SJAG_03956","SJAG_00139"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58457,62848,65067,65229,66158,69192,71842,76278,76926,79239,93852,97029,105162,106715,107621,116076,117389],"is_not":false,"summary":null,"term":"GO:0006362"}]},"cv_name":"biological_process","definition":"The extension of an RNA molecule after transcription initiation and promoter clearance at an RNA polymerase I specific promoter by the addition of ribonucleotides catalyzed by RNA polymerase I.","definition_xrefs":["GOC:mah","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription elongation","termid":"GO:0006354"},{"relation_name":"part_of","term_name":"nucleolar large rRNA transcription by RNA polymerase I","termid":"GO:0042790"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00139":null,"SJAG_00731":null,"SJAG_01128":null,"SJAG_01313":null,"SJAG_01444":null,"SJAG_01562":null,"SJAG_01698":null,"SJAG_01765":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_02653":null,"SJAG_02871":null,"SJAG_03144":null,"SJAG_03578":null,"SJAG_03956":null,"SJAG_04106":null,"SJAG_04261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"transcription elongation by RNA polymerase I","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0001183"],"synonyms":[{"name":"RNA elongation from Pol I promoter","type":"exact"},{"name":"RNA polymerase I transcription elongation factor activity","type":"related"},{"name":"transcription elongation from RNA polymerase I promoter","type":"exact"},{"name":"transcription elongation from RNA polymerase I promoter for nuclear large rRNA transcript","type":"related"}],"termid":"GO:0006362","terms_by_termid":{"GO:0006362":null}}


id: PBO:0055058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2474","termid":"PBO:0055058"}


id: PBO:0084512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of an oxysterol-binding protein family with seven members; in S. cerevisiae, family members have overlapping, redundant functions in sterol metabolism and collectively perform a function essential for viability; contains FFAT motif; interacts with ER anchor Scs2p at patches at the plasma membrane and at the nuclear envelope; regulated by sterol binding; OSH2 has a paralog, SWH1, that arose from the whole genome duplication","termid":"PBO:0084512"}


id: PBO:0062714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily K member 1 pseudogene","termid":"PBO:0062714"}


id: GO:0072377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein activation cascade that contributes to blood coagulation and consists of events leading from the formation of activated factor X to the formation of active thrombin, the cleavage of fibrinogen by thrombin, and the formation of cleaved fibrin into a stable multimeric, cross-linked complex.","definition_xrefs":["GOC:mah","GOC:add","GOC:pde","PMID:1931959"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein activation cascade","termid":"GO:0072376"},{"relation_name":"part_of","term_name":"blood coagulation, fibrin clot formation","termid":"GO:0072378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"blood coagulation, common pathway","termid":"GO:0072377"}


id: GO:0140432
data:
  {"annotated_genes":["SJAG_02374"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93516],"is_not":false,"summary":null,"term":"GO:0140432"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of phosphodiester bonds in 5'OH-RNA according to the reaction 5'OH-NpN-RNA + H20 = 5'OH-NpN + 5'P-RNA, where NpN represents a dinucleotide.","definition_xrefs":["PMID:31777937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA exonuclease activity","termid":"GO:0004532"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02374":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0140098","GO:0016787","GO:0016788","GO:0003674","GO:0004527","GO:0003824"],"is_obsolete":false,"name":"5'-hydroxyl dinucleotide hydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140432","terms_by_termid":{"GO:0140432":null}}


id: PBO:0080030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 16, pseudogene","termid":"PBO:0080030"}


id: PBO:0066084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginyl-tRNA synthetase 1","termid":"PBO:0066084"}


id: PBO:0039959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 2 binding protein pseudogene 2","termid":"PBO:0039959"}


id: PBO:0050720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 6","termid":"PBO:0050720"}


id: PR:O94723
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrpl20 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L20, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1393.11","synonyms":[{"name":"Spom972h-mrpl20","type":"exact"}],"termid":"PR:O94723"}


id: PR:O42945
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03207","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor ATP-dependent RNA helicase prp43 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.10c","secondary_identifiers":["UniProtKB:O42945"],"synonyms":[{"name":"Spom972h-DHX15","type":"exact"}],"termid":"PR:O42945"}


id: PBO:0049147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione peroxidase 4","termid":"PBO:0049147"}


id: PBO:0055792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysyl oxidase like 2","termid":"PBO:0055792"}


id: MONDO:0010751
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unique green phenomenon","secondary_identifiers":["MEDGEN:326816","OMIM:314380","UMLS:C1839116"],"synonyms":[{"name":"unique green phenomenon","type":"exact"}],"termid":"MONDO:0010751","xrefs":{"Monarch":{"xref_id":"0010751"}}}


id: MONDO:1010562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acromegaly that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acromegaly, non-human animal","termid":"MONDO:1010049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acromegaly, dog","secondary_identifiers":["OMIA:000008-9615"],"termid":"MONDO:1010562","xrefs":{"Monarch":{"xref_id":"1010562"}}}


id: GO:0072213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric capsule over time, from its formation to the mature structure. The metanephric capsule is the tough fibrous layer surrounding the metanephros, covered in a thick layer of perinephric adipose tissue. It provides some protection from trauma and damage.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal capsule development","termid":"GO:0072127"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric capsule development","termid":"GO:0072213"}


id: FYPO:0007126
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which microtubule bundle formation that takes place as part of mitotic spindle assembly, and which normally results in a parallel arrangement of microtubules, is abnormal.","definition_xrefs":["GO:0001578","PMID:31615768","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"},{"relation_name":"is_a","term_name":"abnormal microtubule bundle formation","termid":"FYPO:0002761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000054"],"is_obsolete":false,"name":"abnormal microtubule bundle formation during mitotic spindle assembly","synonyms":[{"name":"abnormal microtubule array formation during mitotic spindle assembly","type":"related"},{"name":"abnormal microtubule bundle formation in spindle during mitotic prophase","type":"related"},{"name":"abnormal microtubule bundle formation involved in mitotic spindle assembly","type":"exact"},{"name":"abnormal mitotic spindle microtubule bundling during prophase","type":"exact"},{"name":"abnormal mitotic spindle microtubule bundling during spindle assembly","type":"related"}],"termid":"FYPO:0007126"}


id: PBO:0089025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated PX/BAR domain sorting nexin Atg24","termid":"PBO:0089025"}


id: PBO:0113178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Killer toxin defense factor; key polymorphic factor in the defense against K28 toxin; localizes mainly to vacuolar membrane; most likely acts against K28 during its trafficking after endocytosis; member of DUP240 gene family","termid":"PBO:0113178"}


id: GO:0071111
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyclic di-3',5'-guanylate + H2O = 5'-phosphoguanylyl(3'->5')guanosine + H+.","definition_xrefs":["RHEA:24902","EC:3.1.4.52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"cyclic-guanylate-specific phosphodiesterase activity","secondary_identifiers":["KEGG_REACTION:R08991","MetaCyc:RXN0-4181"],"synonyms":[{"name":"PDEA1","type":"related"},{"name":"VieA","type":"related"},{"name":"c-di-GMP phosphodiesterase activity","type":"related"},{"name":"c-di-GMP-specific phosphodiesterase activity","type":"related"},{"name":"cyclic bis(3->5')diguanylate phosphodiesterase activity","type":"related"},{"name":"phosphodiesterase A1 activity","type":"related"}],"termid":"GO:0071111"}


id: MONDO:0004625
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of a vein.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vein disorder","termid":"MONDO:0004634"},{"relation_name":"is_a","term_name":"vasculitis","termid":"MONDO:0018882"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phlebitis","secondary_identifiers":["NCIT:C38003","DOID:864","EFO:1001395","MEDGEN:18425","MESH:D010689","SCTID:61599003","UMLS:C0031542"],"synonyms":[{"name":"inflammation of vein","type":"exact"},{"name":"vein inflammation","type":"exact"}],"termid":"MONDO:0004625","xrefs":{"Monarch":{"xref_id":"0004625"}}}


id: PBO:0044080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin pseudogene 2","termid":"PBO:0044080"}


id: GO:0002602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antigen processing and presentation of polysaccharide antigen via MHC class II.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002581"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","termid":"GO:0002601"},{"relation_name":"negatively_regulates","term_name":"antigen processing and presentation of polysaccharide antigen via MHC class II","termid":"GO:0002505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","synonyms":[{"name":"down regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"exact"},{"name":"down-regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"exact"},{"name":"downregulation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"exact"},{"name":"inhibition of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"narrow"},{"name":"negative regulation of polysaccharide antigen processing and presentation via MHC class II","type":"exact"}],"termid":"GO:0002602"}


id: MONDO:0009025
data:
  {"annotated_genes":["SJAG_01036"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86965],"is_not":false,"summary":null,"term":"MONDO:0009025"}]},"cv_name":"mondo","definition":"Apparent mineralocorticoid excess (AME) is a rare form of pseudohyperaldosteronism characterized by very early-onset and severe hypertension, associated with low renin levels and hypoaldosteronism.","definition_xrefs":["Orphanet:320"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"adrenal gland hyperfunction","termid":"MONDO:0006640"},{"relation_name":"excluded_subClassOf","term_name":"obsolete genetic hypertension (obsolete MONDO:0015512)","termid":"MONDO:0015512"},{"relation_name":"is_a","term_name":"adrenal gland disorder","termid":"MONDO:0005495"},{"relation_name":"is_a","term_name":"steroid inherited metabolic disorder","termid":"MONDO:0005523"},{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01036":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"apparent mineralocorticoid excess","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0090121","MESH:C537422","NCIT:C123231","DOID:4367","SCTID:703256004","MEDGEN:90983","NANDO:2100130","SCTID:237770005","NCIT:C131083","MESH:D043204","NANDO:2200362","UMLS:C0342488","ICD9:255.3","OMIM:218030","icd11.foundation:1737310323","GARD:433"],"synonyms":[{"name":"11 Beta-hydroxysteroid dehydrogenase type 2 deficiency","type":"exact"},{"name":"11-beta-hydroxysteroid dehydrogenase deficiency type 2","type":"exact"},{"name":"AME","type":"related"},{"name":"AME 1","type":"related"},{"name":"APE","type":"exact"},{"name":"Ame1","type":"related"},{"name":"Ulick syndrome","type":"exact"},{"name":"apparent mineralocorticoid EXCESS","type":"related"},{"name":"apparent mineralocorticoid excess","type":"exact"},{"name":"apparent mineralocorticoid excess syndrome","type":"exact"},{"name":"cortisol 11-Beta-ketoreductase deficiency","type":"related"},{"name":"cortisol 11-beta-ketoreductase deficiency","type":"exact"},{"name":"syndrome of apparent mineralocorticoid Excess","type":"exact"}],"termid":"MONDO:0009025","terms_by_termid":{"MONDO:0009025":null},"xrefs":{"Monarch":{"xref_id":"0009025"}}}


