# terms

id: GO:0032579
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A fibrous network that is part of the hyalin layer extracellular matrix. The apical lamina is thought to be principally composed of the glycoproteins fibropellins. This matrix has been found in echinoderms.","definition_xrefs":["PMID:2060714","PMID:7608987","PMID:9638331","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"hyaline layer","termid":"GO:0033166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"apical lamina of hyaline layer","termid":"GO:0032579"}


id: PBO:0062572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily C member 1","termid":"PBO:0062572"}


id: MONDO:0011954
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"familial melanoma","termid":"MONDO:0018961"},{"relation_name":"excluded_subClassOf","term_name":"susceptibility to familial cutaneous melanoma","termid":"MONDO:0024462"},{"relation_name":"is_a","term_name":"susceptibility to familial cutaneous melanoma","termid":"MONDO:0024462"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoma, cutaneous malignant, susceptibility to, 4","secondary_identifiers":["OMIM:608035","MEDGEN:334129","UMLS:C1842643"],"synonyms":[{"name":"CMM4","type":"exact"},{"name":"melanoma, cutaneous malignant, 4","type":"exact"},{"name":"melanoma, cutaneous malignant, susceptibility to, 4","type":"exact"}],"termid":"MONDO:0011954","xrefs":{"Monarch":{"xref_id":"0011954"}}}


id: RO:0002496
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x existence starts during or after y if and only if the time point at which x starts is after or equivalent to the time point at which y starts. Formally: x existence starts during or after y iff α (x) >= α (y).","direct_ancestors":[{"relation_name":"is_a","term_name":"relation_between_structure_and_stage","termid":"RO:0002487"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"existence_starts_during_or_after","termid":"RO:0002496"}


id: PR:Q06975
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An H/ACA ribonucleoprotein complex subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03642","PRO:DNx","PANTHER:PTHR23237:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H/ACA ribonucleoprotein complex subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC20F10.01","secondary_identifiers":["UniProtKB:Q06975"],"synonyms":[{"name":"Spom972h-GAR1","type":"exact"},{"name":"snoRNP protein GAR1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q06975"}


id: PBO:0071230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 71","termid":"PBO:0071230"}


id: PR:Q9UTC9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A prefoldin subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00201","PANTHER:PTHR13303:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.10","secondary_identifiers":["UniProtKB:Q9UTC9"],"synonyms":[{"name":"Spom972h-PFDN2","type":"exact"}],"termid":"PR:Q9UTC9"}


id: PBO:0075728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites","termid":"PBO:0075728"}


id: PBO:0073125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC11 homolog C, signal peptidase complex subunit","termid":"PBO:0073125"}


id: PBO:0049398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gametocyte specific factor 1","termid":"PBO:0049398"}


id: PBO:0074426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 26","termid":"PBO:0074426"}


id: MONDO:0003759
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A yolk sac tumor that arises from the ovary and occurs in children.","definition_xrefs":["NCIT:C6551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood endodermal sinus tumor","termid":"MONDO:0003400"},{"relation_name":"is_a","term_name":"pediatric ovarian germ cell tumor","termid":"MONDO:0003760"},{"relation_name":"is_a","term_name":"ovarian yolk sac tumor","termid":"MONDO:0006344"},{"relation_name":"is_a","term_name":"childhood gonadal germ cell tumor","termid":"MONDO:0020577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood ovarian yolk sac tumor","secondary_identifiers":["DOID:6083","MEDGEN:234136","UMLS:C1332993","NANDO:2200069"],"synonyms":[{"name":"childhood ovarian endodermal sinus neoplasm","type":"exact"},{"name":"childhood ovarian endodermal sinus tumor","type":"related"},{"name":"childhood ovarian endodermal sinus tumour","type":"related"},{"name":"childhood ovarian yolk Sac neoplasm","type":"related"},{"name":"childhood ovarian yolk sac tumor","type":"exact"},{"name":"ovary childhood endodermal sinus tumor","type":"exact"},{"name":"ovary childhood endodermal sinus tumour","type":"exact"},{"name":"paediatric ovarian endodermal sinus neoplasm","type":"related"},{"name":"paediatric ovarian endodermal sinus tumour","type":"related"},{"name":"paediatric ovarian yolk Sac neoplasm","type":"related"},{"name":"paediatric ovarian yolk Sac tumour","type":"exact"},{"name":"pediatric ovarian endodermal sinus neoplasm","type":"related"},{"name":"pediatric ovarian endodermal sinus tumor","type":"related"},{"name":"pediatric ovarian yolk Sac neoplasm","type":"related"},{"name":"pediatric ovarian yolk Sac tumor","type":"exact"}],"termid":"MONDO:0003759","xrefs":{"Monarch":{"xref_id":"0003759"}}}


id: GO:0050473
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: arachidonate + O2 = (5Z,8Z,11Z,13E)-(15S)-15-hydroperoxyicosa-5,8,11,13-tetraenoate.","definition_xrefs":["EC:1.13.11.33"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"arachidonate 15-lipoxygenase activity","secondary_identifiers":["Reactome:R-HSA-9018907","Reactome:R-HSA-9024881","Reactome:R-HSA-9020262","Reactome:R-HSA-9020275","Reactome:R-HSA-9025152","Reactome:R-HSA-9024872","MetaCyc:ARACHIDONATE-15-LIPOXYGENASE-RXN","Reactome:R-HSA-9020610","RHEA:16869","Reactome:R-HSA-2162002","Reactome:R-HSA-9026003"],"synonyms":[{"name":"15-lipoxygenase activity","type":"related"},{"name":"arachidonate omega(6) lipoxygenase activity","type":"related"},{"name":"arachidonate omega6 lipoxygenase activity","type":"related"},{"name":"arachidonate:oxygen 15-oxidoreductase activity","type":"related"},{"name":"linoleic acid omega6-lipoxygenase activity","type":"related"},{"name":"omega6 lipoxygenase activity","type":"related"}],"termid":"GO:0050473"}


id: GO:0102705
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + L-serine = ethanolaminium(1+) + carbon dioxide.","definition_xrefs":["RHEA:45824","GOC:pz","PMID:11461929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"serine decarboxylase activity","secondary_identifiers":["MetaCyc:RXN-5641"],"termid":"GO:0102705"}


id: GO:0102536
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2S)-sakuranetin + O2 + reduced [NADPH--hemoprotein reductase] = (2S)-7-methylcarthamidin + H(+) + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["PMID:23184958","RHEA:73431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"sakuranetin 6-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-14754"],"termid":"GO:0102536"}


id: GO:0072258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the interstitial fibroblasts of the metanephros as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney interstitial fibroblast differentiation","termid":"GO:0072071"},{"relation_name":"is_a","term_name":"cell differentiation involved in metanephros development","termid":"GO:0072202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric interstitial fibroblast differentiation","synonyms":[{"name":"metanephros interstitial cell differentiation","type":"exact"}],"termid":"GO:0072258"}


id: FYPO:0002757
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of quinidine than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0002682","FYPO:0005447"],"is_obsolete":false,"name":"resistance to quinidine","synonyms":[{"name":"resistance to quinidine during mitotic cell cycle","type":"related"},{"name":"resistance to quinidine during vegetative growth","type":"exact"},{"name":"resistant to quinidine","type":"exact"}],"termid":"FYPO:0002757"}


id: PBO:0028718
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_bipolar_index","termid":"PBO:0028718"}


id: PBO:0110172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation factor Sls1","termid":"PBO:0110172"}


id: MONDO:0008408
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"spinal muscular atrophy","termid":"MONDO:0001516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005559"],"is_obsolete":false,"name":"scapuloperoneal spinal muscular atrophy, autosomal dominant","secondary_identifiers":["ICD9:335.19","OMIM:181405","Orphanet:431255","SCTID:230248006","UMLS:C0751335","DOID:0111552","MEDGEN:148283","EFO:1001992","GARD:10314"],"synonyms":[{"name":"SPSMA","type":"exact"},{"name":"amyotrophy, neurogenic scapuloperoneal, New England type","type":"related"},{"name":"neurogenic scapuloperoneal amyotrophy, New England type","type":"exact"},{"name":"scapuloperoneal neuronopathy","type":"exact"},{"name":"scapuloperoneal spinal muscular atrophy","type":"exact"}],"termid":"MONDO:0008408","xrefs":{"Monarch":{"xref_id":"0008408"}}}


id: PBO:0043548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type II alpha 1 chain","termid":"PBO:0043548"}


id: PBO:0039710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APOA1 antisense RNA","termid":"PBO:0039710"}


id: GO:0048095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of a pattern of pigment in females.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex-specific pigmentation","termid":"GO:0048071"},{"relation_name":"part_of","term_name":"female sex differentiation","termid":"GO:0046660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female pigmentation","termid":"GO:0048095"}


id: SO:0001455
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A relatively rare amino acid encoded by the codon UGA in some contexts, whereas UGA is a termination codon in other contexts.","definition_xrefs":["PMID:23275319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenocysteine","synonyms":[{"name":"Sec","type":"exact"},{"name":"U","type":"exact"}],"termid":"SO:0001455"}


id: GO:0005356
data:
  {"annotated_genes":["SJAG_03608"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[119076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: D-glucose + H+ = D-glucose + H+. Symporter activity enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose:proton symporter activity","termid":"GO:0009679"},{"relation_name":"is_a","term_name":"D-glucose transmembrane transporter activity","termid":"GO:0055056"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"D-glucose:proton symporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0005361"],"synonyms":[{"name":"glucose:proton symporter activity","type":"exact"},{"name":"hydrogen:glucose symporter activity","type":"exact"},{"name":"hydrogen:glucose transporter activity","type":"related"},{"name":"transepithelial hydrogen/glucose transporter activity","type":"related"},{"name":"transepithelial hydrogen:glucose symporter activity","type":"narrow"},{"name":"transepithelial hydrogen:glucose transporter activity","type":"related"}],"termid":"GO:0005356","terms_by_termid":{"GO:0005358":null}}


id: PBO:0079847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-45 myosin chaperone B","termid":"PBO:0079847"}


id: MONDO:0017140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"L1 syndrome is a mild to severe congenital X-linked developmental disorder characterized by hydrocephalus of varying degrees of severity, intellectual deficit, spasticity of the legs, and adducted thumbs. The syndrome represents a spectrum of disorders including: X-linked hydrocephalus with stenosis of the aqueduct of Sylvius (HSAS), MASA syndrome, X-linked complicated hereditary spastic paraplegia type 1, and X-linked complicated corpus callosum agenesis.","definition_xrefs":["Orphanet:275543"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L1 syndrome","secondary_identifiers":["UMLS:C5779710","NORD:1343","GARD:12524","MEDGEN:1830362","icd11.foundation:1457804873"],"synonyms":[{"name":"CRASH syndrome","type":"exact"},{"name":"L1 syndrome","type":"exact"},{"name":"L1CAM syndrome","type":"exact"},{"name":"corpus callosum hypoplasia-retardation-adducted thumbs-spasticity-hydrocephalus syndrome","type":"exact"}],"termid":"MONDO:0017140","xrefs":{"Monarch":{"xref_id":"0017140"}}}


id: PBO:0036167
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_dimethylation_during_vegetative_growth","termid":"PBO:0036167"}


id: GO:0033237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: an 11-beta-hydroxysteroid + NADP+ = an 11-oxosteroid + NADPH + H+.","definition_xrefs":["EC:1.1.1.146"],"gene_count":0,"genotype_count":0,"name":"obsolete 11-beta-hydroxysteroid dehydrogenase (NADP+) activity (obsolete GO:0033237)","synonyms":[{"name":"11-beta-hydroxysteroid dehydrogenase (NADP+) activity","type":"exact"},{"name":"11beta-hydroxysteroid:NADP+ 11-oxidoreductase","type":"related"},{"name":"beta-hydroxysteroid dehydrogenase","type":"broad"},{"name":"corticosteroid 11-beta-dehydrogenase activity","type":"related"}],"termid":"GO:0033237"}


id: GO:1902416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mRNA binding.","definition_xrefs":["GOC:rb","GOC:TermGenie","PMID:22890846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA binding","termid":"GO:1902415"},{"relation_name":"is_a","term_name":"positive regulation of RNA binding","termid":"GO:1905216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mRNA binding","synonyms":[{"name":"activation of mRNA binding","type":"narrow"},{"name":"up regulation of mRNA binding","type":"exact"},{"name":"up-regulation of mRNA binding","type":"exact"},{"name":"upregulation of mRNA binding","type":"exact"}],"termid":"GO:1902416"}


id: SO:0000955
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, double-stranded DNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"double","termid":"SO:0000985"},{"relation_name":"is_a","term_name":"DNA_chromosome","termid":"SO:0000954"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double_stranded_DNA_chromosome","synonyms":[{"name":"double stranded DNA chromosome","type":"exact"}],"termid":"SO:0000955"}


id: PR:Q09329
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An E3 ubiquitin-protein ligase UBR7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein mlo2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4.05","secondary_identifiers":["UniProtKB:Q09329"],"synonyms":[{"name":"Spom972h-UBR7","type":"exact"}],"termid":"PR:Q09329"}


id: MONDO:0017088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neural tube defect","termid":"MONDO:0018075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"isolated amyelia","secondary_identifiers":["GARD:20976","Orphanet:268868","icd11.foundation:1787577133"],"termid":"MONDO:0017088","xrefs":{"Monarch":{"xref_id":"0017088"}}}


id: MONDO:1011279
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Age-related macular degeneration that occurs in Rhesus monkey.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"age-related macular degeneration, non-human animal","termid":"MONDO:1010351"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"age-related macular degeneration, Rhesus monkey","secondary_identifiers":["OMIA:002142-9544"],"termid":"MONDO:1011279","xrefs":{"Monarch":{"xref_id":"1011279"}}}


id: MONDO:0024573
data:
  {"annotated_genes":["SJAG_03145","SJAG_02785","SJAG_03453","SJAG_00547","SJAG_00228","SJAG_03126","SJAG_02342","SJAG_02923","SJAG_03703","SJAG_01181","SJAG_03077","SJAG_02431","SJAG_00993","SJAG_01665","SJAG_02536"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:8000015"},{"annotations":[86792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014112"},{"annotations":[86794,86795,86793],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014113"},{"annotations":[86798,86799,86800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014114"},{"annotations":[87478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012557"},{"annotations":[86971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009026"},{"annotations":[86949,86950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008647"},{"annotations":[88237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012112"},{"annotations":[87999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012799"},{"annotations":[88246,88247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013197"},{"annotations":[87125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010946"},{"annotations":[88242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012111"},{"annotations":[89076,89075,89074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008104"},{"annotations":[87558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033669"},{"annotations":[88441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012371"},{"annotations":[88232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013186"},{"annotations":[87296,87295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054588"}]},"cv_name":"mondo","definition":"Hypertrophic cardiomyopathy caused by mutations in the genes encoding components of the sarcomere, in the absence of predisposing conditions.","definition_xrefs":["NCIT:C84773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrophic cardiomyopathy","termid":"MONDO:0005045"},{"relation_name":"is_a","term_name":"familial cardiomyopathy","termid":"MONDO:0005217"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00228":null,"SJAG_00547":null,"SJAG_00993":null,"SJAG_01181":null,"SJAG_01665":null,"SJAG_02342":null,"SJAG_02431":null,"SJAG_02536":null,"SJAG_02785":null,"SJAG_02923":null,"SJAG_03077":null,"SJAG_03126":null,"SJAG_03145":null,"SJAG_03453":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"familial hypertrophic cardiomyopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080326","MEDGEN:183649","OMIMPS:192600","MESH:D024741","Orphanet:155","UMLS:C0949658","SCTID:471885006"],"synonyms":[{"name":"cardiomyopathy, familial hypertrophic","type":"exact"},{"name":"familial hypertrophic cardiomyopathy","type":"exact"},{"name":"familila or idiopathic hypertrophic obstructive cardiomyopathy","type":"exact"},{"name":"hereditary hypertrophic cardiomyopathy","type":"exact"},{"name":"hypertrophic familial cardiomyopathy","type":"exact"}],"termid":"MONDO:0024573","terms_by_termid":{"MONDO:0008104":null,"MONDO:0008647":null,"MONDO:0009026":null,"MONDO:0010946":null,"MONDO:0012111":null,"MONDO:0012112":null,"MONDO:0012371":null,"MONDO:0012557":null,"MONDO:0012799":null,"MONDO:0013186":null,"MONDO:0013197":null,"MONDO:0014112":null,"MONDO:0014113":null,"MONDO:0014114":null,"MONDO:0033669":null,"MONDO:0054588":null,"MONDO:8000015":null},"xrefs":{"Monarch":{"xref_id":"0024573"}}}


id: PBO:0013057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudokinase Tea5","termid":"PBO:0013057"}


id: PBO:0077929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTE2 pseudogene 2","termid":"PBO:0077929"}


id: PBO:0081374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 213","termid":"PBO:0081374"}


id: PBO:0081780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 707","termid":"PBO:0081780"}


id: GO:0048310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The partitioning of nuclei between daughter cells at cell division.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleus inheritance (obsolete GO:0048310)","synonyms":[{"name":"cell nucleus inheritance","type":"exact"}],"termid":"GO:0048310"}


id: MONDO:0018571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 5","termid":"MONDO:0016904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contractures-developmental delay-Pierre Robin syndrome","secondary_identifiers":["UMLS:C5680042","GARD:21816","Orphanet:436003","MEDGEN:1805516"],"synonyms":[{"name":"5q23 microdeletion syndrome","type":"exact"}],"termid":"MONDO:0018571","xrefs":{"Monarch":{"xref_id":"0018571"}}}


id: GO:0051065
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dCTP + thioredoxin disulfide + H2O = CTP + thioredoxin. Thioredoxin disulfide is the oxidized form of thioredoxin.","definition_xrefs":["MetaCyc:1.17.4.2-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete CTP reductase activity (obsolete GO:0051065)","synonyms":[{"name":"CTP reduction","type":"related"}],"termid":"GO:0051065"}


id: MONDO:0008871
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A microcephalic osteodysplastic primordial dwarfism that has material basis in homozygous or compound heterozygous mutation in the RNU4ATAC gene, encoding a small nuclear RNA (snRNA) component of the U12-dependent (minor) spliceosome, on chromosome 2q14.2. It is characterized by dwarfism, microcephaly, and neurologic abnormalities, including mental retardation, brain malformations, and ocular, auditory sensory deficits.","definition_xrefs":["DOID:0060608","OMIM:210710","PMID:22302400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microcephalic osteodysplastic primordial dwarfism","termid":"MONDO:0000060"},{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"},{"relation_name":"is_a","term_name":"microcephalic osteodysplastic primordial dwarfism types I and III","termid":"MONDO:0016994"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"},{"relation_name":"is_a","term_name":"RNU4ATAC spectrum disorder","termid":"MONDO:0100558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005497"],"is_obsolete":false,"name":"microcephalic osteodysplastic primordial dwarfism type I","secondary_identifiers":["MEDGEN:347149","GARD:15144","UMLS:C1859452","SCTID:254102008"],"synonyms":[{"name":"MOPD 1","type":"exact"},{"name":"MOPD1","type":"exact"},{"name":"Taybi-Linder syndrome","type":"exact"},{"name":"brachymelic primordial dwarfism","type":"exact"},{"name":"cephaloskeletal dysplasia","type":"exact"},{"name":"low-birth-weight dwarfism with skeletal dysplasia","type":"exact"},{"name":"microcephalic osteodysplastic primordial dwarfism, type 1","type":"exact"},{"name":"microcephalic osteodysplastic primordial dwarfism, type I","type":"exact"},{"name":"osteodysplastic primordial dwarfism type I","type":"exact"},{"name":"osteodysplastic primordial dwarfism, type 1","type":"exact"}],"termid":"MONDO:0008871","xrefs":{"Monarch":{"xref_id":"0008871"}}}


id: MONDO:0009987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinitis pigmentosa that is characterized autosomal recessive inheritance of pigmentary retinal degeneration with onset in the infancy but slower rates of progression than other forms of retinopathy.","definition_xrefs":["DOID:0110422","PMID:3189470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736","MONDO:0005328"],"is_obsolete":false,"name":"autosomal recessive pericentral pigmentary retinopathy","secondary_identifiers":["MESH:C564838","GARD:15231","ICD10CM:H35.5","UMLS:C1849398","MEDGEN:340314","OMIM:268060"],"synonyms":[{"name":"retinitis pigmentosa, pericentral","type":"related"},{"name":"retinopathy, pericentral pigmentary, autosomal recessive","type":"related"}],"termid":"MONDO:0009987","xrefs":{"Monarch":{"xref_id":"0009987"}}}


id: GO:0048673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which outgrowths develop from the axons of intact undamaged neurons as a result of injury to an axon. The collateral sprouts typically appear from undamaged axons in a tissue which has had part of its nerve supply removed, and they can often innervate successfully any cells that have lost some or all of their original synaptic input.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon regeneration","termid":"GO:0031103"},{"relation_name":"is_a","term_name":"collateral sprouting","termid":"GO:0048668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"collateral sprouting of intact axon in response to injury","termid":"GO:0048673"}


id: PBO:0041671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase","termid":"PBO:0041671"}


id: PBO:0046345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 3","termid":"PBO:0046345"}


id: PBO:0053051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARP7 pseudogene 2","termid":"PBO:0053051"}


id: GO:0043524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process in neurons.","definition_xrefs":["GOC:go_curators","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"is_a","term_name":"regulation of neuron apoptotic process","termid":"GO:0043523"},{"relation_name":"negatively_regulates","term_name":"neuron apoptotic process","termid":"GO:0051402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuron apoptotic process","synonyms":[{"name":"down regulation of neuron apoptosis","type":"exact"},{"name":"down-regulation of neuron apoptosis","type":"exact"},{"name":"downregulation of neuron apoptosis","type":"exact"},{"name":"inhibition of neuron apoptosis","type":"narrow"},{"name":"negative regulation of neuron apoptosis","type":"narrow"},{"name":"negative regulation of programmed cell death, neurons","type":"exact"},{"name":"neuron survival","type":"narrow"}],"termid":"GO:0043524"}


id: PBO:0069167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 419, pseudogene","termid":"PBO:0069167"}


id: MONDO:0004973
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive carcinoma with a poor prognosis characterized by a presence of both malignant squamous cells and glandular cells.","definition_xrefs":["NCIT:C9133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosquamous carcinoma","termid":"MONDO:0006074"},{"relation_name":"is_a","term_name":"non-small cell squamous lung carcinoma","termid":"MONDO:0056806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adenosquamous lung carcinoma","secondary_identifiers":["UMLS:C0279557","EFO:0000233","DOID:4829","ICD9:162.9","ONCOTREE:LUAS","SCTID:707405009","MEDGEN:79006"],"synonyms":[{"name":"adenosquamous cell lung carcinoma","type":"exact"},{"name":"adenosquamous lung cancer","type":"exact"},{"name":"adenosquamous lung carcinoma","type":"exact"},{"name":"lung adenosquamous carcinoma","type":"exact"}],"termid":"MONDO:0004973","xrefs":{"Monarch":{"xref_id":"0004973"}}}


id: GO:1990977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of firing from a late origin of replication involved in mitotic DNA replication.","definition_xrefs":["PMID:26436827"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mitotic DNA replication initiation from late origin (obsolete GO:1990977)","termid":"GO:1990977"}


id: GO:0050159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: o-orsellinate + H+ = CO2 + orcinol.","definition_xrefs":["EC:4.1.1.58","RHEA:16733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"orsellinate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R02831","MetaCyc:ORSELLINATE-DECARBOXYLASE-RXN"],"synonyms":[{"name":"orsellinate carboxy-lyase (orcinol-forming)","type":"related"},{"name":"orsellinate carboxy-lyase activity","type":"related"}],"termid":"GO:0050159"}


id: PBO:0056637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 14","termid":"PBO:0056637"}


id: MONDO:0000585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Good syndrome (obsolete MONDO:0000585)","termid":"MONDO:0000585","xrefs":{"Monarch":{"xref_id":"0000585"}}}


id: PBO:0005845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinephosphate cytidylyltransferase (predicted)","termid":"PBO:0005845"}


id: GO:0018333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient phosphorylation of peptidyl-threonine to form O-phospho-L-threonine.","definition_xrefs":["RESID:AA0038"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via O-phospho-L-threonine (obsolete GO:0018333)","termid":"GO:0018333"}


id: MONDO:0016896
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete partial deletion of the short arm of chromosome 18 (obsolete MONDO:0016896)","termid":"MONDO:0016896","xrefs":{"Monarch":{"xref_id":"0016896"}}}


id: MONDO:0700000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant polycystic kidney disease in which the cause of the disease is a mutation in the ALG9 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant polycystic kidney disease","termid":"MONDO:0004691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0000426"],"is_obsolete":false,"name":"ALG9-associated autosomal dominant polycystic kidney disease","synonyms":[{"name":"ALG9 autosomal dominant polycystic kidney disease","type":"exact"},{"name":"ALG9 related autosomal dominant polycystic kidney disease","type":"exact"},{"name":"ALG9-associated ADPKD","type":"exact"},{"name":"ALG9-associated autosomal dominant polycystic kidney disease","type":"exact"},{"name":"Autosomal Dominant Polycystic Kidney Disease - ALG9","type":"exact"},{"name":"autosomal dominant polycystic kidney disease caused by mutation in ALG9","type":"exact"}],"termid":"MONDO:0700000","xrefs":{"Monarch":{"xref_id":"0700000"}}}


id: MONDO:0012900
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated restrictive cardiomyopathy in which the cause of the disease is a mutation in the TNNT2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial restrictive cardiomyopathy","termid":"MONDO:0016340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiomyopathy, familial restrictive, 3","secondary_identifiers":["MEDGEN:382807","GARD:18072","MESH:C567316","UMLS:C2676271","OMIM:612422","DOID:0111427"],"synonyms":[{"name":"RCM3","type":"related"},{"name":"TNNT2 familial isolated restrictive cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, familial restrictive, 3","type":"exact"},{"name":"cardiomyopathy, familial restrictive, type 3","type":"exact"},{"name":"familial isolated restrictive cardiomyopathy caused by mutation in TNNT2","type":"exact"}],"termid":"MONDO:0012900","xrefs":{"Monarch":{"xref_id":"0012900"}}}


id: RO:0002006
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"overlaps","termid":"RO:0002131"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_synaptic_terminal_of","termid":"RO:0002006"}


id: GO:0047983
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-alanine + L-gamma-glutamyl-L-cysteine + ATP = gamma-L-glutamyl-L-cysteinyl-beta-alanine + ADP + 2 H+ + phosphate.","definition_xrefs":["EC:6.3.2.23","RHEA:17993"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"homoglutathione synthase activity","secondary_identifiers":["KEGG_REACTION:R02741","MetaCyc:HOMOGLUTATHIONE-SYNTHASE-RXN"],"synonyms":[{"name":"beta-alanine specific hGSH synthetase activity","type":"related"},{"name":"gamma-L-glutamyl-L-cysteine:beta-alanine ligase (ADP-forming)","type":"related"},{"name":"homoglutathione synthetase activity","type":"related"}],"termid":"GO:0047983"}


id: GO:0047452
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protoaphin aglucone = H2O + xanthoaphin.","definition_xrefs":["EC:4.2.1.73","RHEA:23876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"protoaphin-aglucone dehydratase (cyclizing) activity","secondary_identifiers":["MetaCyc:4.2.1.73-RXN","KEGG_REACTION:R03742"],"synonyms":[{"name":"protoaphin dehydratase (cyclizing)","type":"related"},{"name":"protoaphin dehydratase activity","type":"related"},{"name":"protoaphin-aglucone hydro-lyase (cyclizing)","type":"related"},{"name":"protoaphin-aglucone hydro-lyase (cyclizing; xanthoaphin-forming)","type":"related"}],"termid":"GO:0047452"}


id: PATO:0000103
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000103 micronutrient sensitivity (obsolete PATO:0000103)","termid":"PATO:0000103"}


id: PBO:0077752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of myb1 like 2 membrane trafficking protein","termid":"PBO:0077752"}


id: PBO:0112836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endomembrane system protein, FAR-17a/AIG1-like family protein, Aig1","termid":"PBO:0112836"}


id: GO:0010578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of adenylate cyclase (AC) activity that is an integral part of a G protein-coupled receptor signaling pathway.","definition_xrefs":["GOC:dph","GOC:signaling","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of adenylate cyclase activity involved in G protein-coupled receptor signaling pathway (obsolete GO:0010578)","synonyms":[{"name":"regulation of adenylate cyclase activity involved in G-protein coupled receptor signaling pathway","type":"exact"},{"name":"regulation of adenylate cyclase activity involved in G-protein signaling pathway","type":"exact"},{"name":"regulation of adenylate cyclase activity involved in G-protein signalling","type":"exact"}],"termid":"GO:0010578"}


id: PBO:0001653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxy-3-methylglutaryl-CoA synthase","termid":"PBO:0001653"}


id: GO:0016601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette in which a small monomeric GTPase of the Rac subfamily relays a signal.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small GTPase-mediated signal transduction","termid":"GO:0007264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Rac protein signal transduction","secondary_identifiers":["Reactome:R-HSA-428540"],"synonyms":[{"name":"Rac mediated signal transduction","type":"exact"}],"termid":"GO:0016601"}


id: MONDO:0001289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete endometriosis of ovary (obsolete MONDO:0001289)","termid":"MONDO:0001289","xrefs":{"Monarch":{"xref_id":"0001289"}}}


id: MONDO:0008020
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple exostoses with spastic tetraparesis","secondary_identifiers":["MEDGEN:371889","OMIM:158345","UMLS:C1834724","MESH:C563566"],"synonyms":[{"name":"Hamann Zanki schimrigk syndrome","type":"related"},{"name":"multiple exostoses with spastic tetraparesis","type":"exact"},{"name":"spasticity multiple exostoses","type":"related"}],"termid":"MONDO:0008020","xrefs":{"Monarch":{"xref_id":"0008020"}}}


id: PBO:0076230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUPT20H like 1","termid":"PBO:0076230"}


id: MONDO:0013918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"15q overgrowth syndrome","termid":"MONDO:0017806"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal tetrasomy 15q","secondary_identifiers":["Orphanet:314588","MEDGEN:766772","UMLS:C3553858","GARD:17424","OMIM:614846"],"synonyms":[{"name":"distal tetrasomy type 15q","type":"exact"},{"name":"levy-Shanske syndrome","type":"related"},{"name":"tetrasomy 15(q25-qter)","type":"exact"},{"name":"tetrasomy 15q26","type":"exact"},{"name":"tetrasomy type 15Q26","type":"exact"}],"termid":"MONDO:0013918","xrefs":{"Monarch":{"xref_id":"0013918"}}}


id: PBO:0002515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Sfp1 (predicted)","termid":"PBO:0002515"}


id: MONDO:0006292
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm of the pleura or peritoneum, arising from mesothelial cells. It is associated with exposure to asbestos.","definition_xrefs":["NCIT:C4456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"mesothelioma","termid":"MONDO:0005065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant mesothelioma","secondary_identifiers":["MESH:C562839","DOID:1790","GARD:7026","ICDO:9050/3","Orphanet:50251","UMLS:C0345967","HP:0100001","ICD9:199.1","MedDRA:10027406","icd11.foundation:369414280","EFO:1000355","MEDGEN:91062","OMIM:156240","SCTID:109378008"],"synonyms":[{"name":"MESOM","type":"related"},{"name":"advanced malignant mesothelioma","type":"narrow"},{"name":"asbestos-related malignant mesothelioma","type":"narrow"},{"name":"diffuse malignant mesothelioma","type":"narrow"},{"name":"malignant mesothelial neoplasm","type":"narrow"},{"name":"malignant mesothelial tumor","type":"exact"},{"name":"malignant mesothelial tumour","type":"exact"},{"name":"malignant mesothelioma","type":"exact"},{"name":"malignant mesothelioma (disease)","type":"exact"},{"name":"malignant neoplasm of mesothelium","type":"exact"},{"name":"malignant neoplasm of the mesothelium","type":"exact"},{"name":"malignant tumor of mesothelium","type":"exact"},{"name":"malignant tumor of the mesothelium","type":"exact"},{"name":"malignant tumour of mesothelium","type":"exact"},{"name":"malignant tumour of the mesothelium","type":"exact"},{"name":"mesothelioma, malignant","type":"exact"},{"name":"mesothelioma, somatic","type":"exact"}],"termid":"MONDO:0006292","xrefs":{"Monarch":{"xref_id":"0006292"}}}


id: PBO:0075796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sex determining region Y","termid":"PBO:0075796"}


id: PBO:0082585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chromatin-binding ATPase that regulates histone gene expression; only bromodomain-containing AAA-ATPase in yeast; bromodomain interacts with N-terminal tail of histone H3; relocalizes to cytosol in response to hypoxia; human ortholog ANCCA is coactivator of both estrogen and androgen receptors, and increased expression of ANCCA is associated with breast and prostate cancers with poor prognoses","termid":"PBO:0082585"}


id: PBO:0036256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic ER membrane protein implicated in cholesterol metabolism in human (predicted)","termid":"PBO:0036256"}


id: GO:0060845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of a cell to a venous endothelial cell fate and its capacity to differentiate into an venous endothelial cell.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel endothelial cell fate commitment","termid":"GO:0060846"},{"relation_name":"part_of","term_name":"venous endothelial cell differentiation","termid":"GO:0060843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venous endothelial cell fate commitment","termid":"GO:0060845"}


id: PBO:0061027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ncRNA involved in NHEJ oncogenic ligation efficiency","termid":"PBO:0061027"}


id: GO:0006583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of melanin from other compounds, including tyrosine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine metabolic process","termid":"GO:0006570"},{"relation_name":"is_a","term_name":"melanin biosynthetic process","termid":"GO:0042438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"melanin biosynthetic process from tyrosine","synonyms":[{"name":"melanin anabolism from tyrosine","type":"exact"},{"name":"melanin formation from tyrosine","type":"exact"},{"name":"melanin synthesis from tyrosine","type":"exact"}],"termid":"GO:0006583"}


id: MONDO:0018652
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete biological anomaly without phenotypic characterization (obsolete MONDO:0018652)","secondary_identifiers":["Orphanet:447874"],"termid":"MONDO:0018652","xrefs":{"Monarch":{"xref_id":"0018652"}}}


id: GO:0010927
data:
  {"annotated_genes":["SJAG_02989","SJAG_03453","SJAG_03746","SJAG_04509","SJAG_04781","SJAG_02736","SJAG_04470","SJAG_01993","SJAG_02248","SJAG_00974","SJAG_00514","SJAG_03536","SJAG_04010","SJAG_02320","SJAG_01769","SJAG_03013","SJAG_01943","SJAG_02241","SJAG_01794","SJAG_00971","SJAG_01894","SJAG_00486","SJAG_04275","SJAG_00821","SJAG_01321","SJAG_00114","SJAG_02700","SJAG_04868","SJAG_02529","SJAG_03250","SJAG_04922","SJAG_02379","SJAG_03688","SJAG_00405","SJAG_04615","SJAG_00663","SJAG_04483","SJAG_00826","SJAG_05309","SJAG_02169","SJAG_04901","SJAG_04271","SJAG_03915","SJAG_04080","SJAG_01483","SJAG_02864"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92060,93587,90515,90026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030476"},{"annotations":[106806,74741,93314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031321"},{"annotations":[109220,93103,100642,111961,115787,120413,120714,120897,99402,99365,101722,103528,107116,97188],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0032120"},{"annotations":[101651,99366,108665,115788,94104,109551,105948,98682,101652,104740],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031322"},{"annotations":[100100,100712,90073,94326,100793,116182],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:1904600"},{"annotations":[92539],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[113218,95288,92658,91684,89709],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902917"},{"annotations":[118793],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903023"},{"annotations":[101653,101939,101654,117830,107843,96318],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"The cellular component assembly that is part of the initial shaping of the component during its developmental progression.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"cellular anatomical entity morphogenesis","termid":"GO:0032989"}],"gene_count":46,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00405":null,"SJAG_00486":null,"SJAG_00514":null,"SJAG_00663":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_00974":null,"SJAG_01321":null,"SJAG_01483":null,"SJAG_01769":null,"SJAG_01794":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02169":null,"SJAG_02241":null,"SJAG_02248":null,"SJAG_02320":null,"SJAG_02379":null,"SJAG_02529":null,"SJAG_02700":null,"SJAG_02736":null,"SJAG_02864":null,"SJAG_02989":null,"SJAG_03013":null,"SJAG_03250":null,"SJAG_03453":null,"SJAG_03536":null,"SJAG_03688":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04080":null,"SJAG_04271":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04615":null,"SJAG_04781":null,"SJAG_04868":null,"SJAG_04901":null,"SJAG_04922":null,"SJAG_05309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"cellular component assembly involved in morphogenesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0010927","terms_by_termid":{"GO:0030476":null,"GO:0031321":null,"GO:0031322":null,"GO:0032120":null,"GO:0070583":null,"GO:1902917":null,"GO:1903023":null,"GO:1903024":null,"GO:1904600":null}}


id: RO:0002410
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"This relation groups causal relations between material entities and causal relations between processes","direct_ancestors":[{"relation_name":"is_a","term_name":"related_via_dependence_to","termid":"RO:0002609"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_related_to","termid":"RO:0002410"}


id: GO:2000458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of astrocyte chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"is_a","term_name":"regulation of glial cell migration","termid":"GO:1903975"},{"relation_name":"regulates","term_name":"astrocyte chemotaxis","termid":"GO:0035700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of astrocyte chemotaxis","termid":"GO:2000458"}


id: FYPO:0003512
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of hercynine (N(alpha),N(alpha),N(alpha)-trimethyl-L-histidine) measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell","termid":"FYPO:0001888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"hercynine absent from cell","synonyms":[{"name":"N(alpha),N(alpha),N(alpha)-trimethyl-L-histidine absent from cell","type":"exact"}],"termid":"FYPO:0003512"}


id: PBO:0054004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1332","termid":"PBO:0054004"}


id: PBO:0085244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidyl-prolyl cis-trans isomerase (cyclophilin) of the ER; catalyzes the cis-trans isomerization of peptide bonds N-terminal to proline residues; transcriptionally induced in response to unfolded proteins in the ER; CPR5 has a paralog, CPR2, that arose from the whole genome duplication","termid":"PBO:0085244"}


id: PBO:0041348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 open reading frame 84","termid":"PBO:0041348"}


id: GO:0010074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism retains a population of meristem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell population maintenance","termid":"GO:0019827"},{"relation_name":"part_of","term_name":"meristem maintenance","termid":"GO:0010073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of meristem identity","secondary_identifiers":["GO:0032503"],"synonyms":[{"name":"maintenance of meristem cell identity","type":"exact"},{"name":"meristem cell maintenance","type":"exact"}],"termid":"GO:0010074"}


id: PR:O74416
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome maturation protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12828:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome maturation factor ump1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC14G10.03c","secondary_identifiers":["UniProtKB:O74416"],"synonyms":[{"name":"SPCC14G10.03c","type":"related"},{"name":"Spom972h-POMP","type":"exact"}],"termid":"PR:O74416"}


id: PBO:0069700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 979, pseudogene","termid":"PBO:0069700"}


id: PBO:0043398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chemerin chemokine-like receptor 1","termid":"PBO:0043398"}


id: PR:O59710
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An NADPH:adrenodoxin oxidoreductase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11938:SF4","PRO:DNx","OMA:SCHPO03689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH:adrenodoxin oxidoreductase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B8.01c","secondary_identifiers":["UniProtKB:O59710"],"synonyms":[{"name":"AR (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-FDXR","type":"exact"},{"name":"adrenodoxin reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ferredoxin reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ferredoxin--NADP(+) reductase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59710"}


id: GO:0045567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of TRAIL (TNF-related apoptosis inducing ligand) receptor 2.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of TRAIL receptor 2 biosynthetic process (obsolete GO:0045567)","synonyms":[{"name":"down regulation of TRAIL receptor 2 biosynthetic process","type":"exact"},{"name":"down-regulation of TRAIL receptor 2 biosynthetic process","type":"exact"},{"name":"downregulation of TRAIL receptor 2 biosynthetic process","type":"exact"},{"name":"inhibition of TRAIL receptor 2 biosynthetic process","type":"narrow"},{"name":"negative regulation of TRAIL receptor 2 anabolism","type":"exact"},{"name":"negative regulation of TRAIL receptor 2 biosynthesis","type":"exact"},{"name":"negative regulation of TRAIL receptor 2 formation","type":"exact"},{"name":"negative regulation of TRAIL receptor 2 synthesis","type":"exact"}],"termid":"GO:0045567"}


id: GO:0001700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the embryo over time, from zygote formation through syncytial blastoderm to the hatching of the first instar larva. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:go_curators","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryo development ending in birth or egg hatching","termid":"GO:0009792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic development via the syncytial blastoderm","termid":"GO:0001700"}


id: GO:0014858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of skeletal muscle cell proliferation.","definition_xrefs":["GOC:ef","CL:0000188","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle cell proliferation","termid":"GO:0014857"},{"relation_name":"positively_regulates","term_name":"skeletal muscle cell proliferation","termid":"GO:0014856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of skeletal muscle cell proliferation","termid":"GO:0014858"}


id: GO:0002061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a pyrimidine nucleobase, an organic nitrogenous base with a pyrimidine skeleton.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase binding","termid":"GO:0002054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"pyrimidine nucleobase binding","synonyms":[{"name":"1,3-diazine binding","type":"narrow"},{"name":"pyrimidine base binding","type":"exact"},{"name":"pyrimidine binding","type":"related"}],"termid":"GO:0002061"}


id: GO:1901756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving butirosin.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"},{"relation_name":"is_a","term_name":"polyol metabolic process","termid":"GO:0019751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"butirosin metabolic process","synonyms":[{"name":"butirosin metabolism","type":"exact"}],"termid":"GO:1901756"}


id: PBO:0052869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 5-13, pseudogene","termid":"PBO:0052869"}


id: PBO:0036453
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Microvillus inclusion disease","termid":"PBO:0036453"}


id: GO:0090394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that prevents the establishment or decreases the extent of the excitatory postsynaptic potential (EPSP) which is a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"modulation of excitatory postsynaptic potential","termid":"GO:0098815"},{"relation_name":"negatively_regulates","term_name":"excitatory postsynaptic potential","termid":"GO:0060079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of excitatory postsynaptic potential","synonyms":[{"name":"negative regulation of EPSP","type":"related"},{"name":"negative regulation of excitatory post-synaptic membrane potential","type":"exact"},{"name":"reduction of excitatory postsynaptic membrane potential","type":"exact"}],"termid":"GO:0090394"}


id: PBO:0088010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type II HSP40 co-chaperone that interacts with the HSP70 protein Ssa1p; shuttles between cytosol and nucleus; mediates delivery of misfolded proteins into the nucleus for degradation; involved in proteasomal degradation of misfolded cytosolic proteins; protein abundance increases in response to DNA replication stress; polyQ aggregates sequester Sis1p and interfere with clearance of misfolded proteins; similar to bacterial DnaJ proteins and mammalian DnaJB1","termid":"PBO:0088010"}


id: GO:0044108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom, carried out at the level of an individual cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular alcohol biosynthetic process (obsolete GO:0044108)","termid":"GO:0044108"}


id: FYPO:0000808
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121038],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0000356"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which lipid droplet organization is abnormal. Lipid droplet organization results in the assembly, arrangement of constituent parts, or disassembly of a lipid droplet.","definition_xrefs":["GO:0034389","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00426":null},"genotype_count":1,"genotypes_by_uniquename":{"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal lipid droplet organization","references_by_uniquename":{"PMID:25318672":null},"single_locus_annotated_genes":["SJAG_00426"],"single_locus_genotype_uniquenames":["bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal lipid droplet organisation","type":"exact"},{"name":"abnormal lipid droplet organization during mitotic cell cycle","type":"related"},{"name":"abnormal lipid droplet organization during vegetative growth","type":"exact"},{"name":"abnormal lipid particle organization","type":"exact"}],"termid":"FYPO:0000808","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000162":null,"FYPO:0000356":null,"FYPO_EXT:0000001":null}}


id: PBO:0000154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinic acid plasma membrane transporter (predicted)","termid":"PBO:0000154"}


id: MONDO:0001438
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary fibrosis","termid":"MONDO:0002771"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"postinflammatory pulmonary fibrosis","secondary_identifiers":["MEDGEN:511625","SCTID:266368002","UMLS:C0175999","ICD9:515","DOID:12123"],"synonyms":[{"name":"post-inflammatory pulmonary fibrosis","type":"exact"},{"name":"postinflammatory pulmonary fibrosis","type":"exact"}],"termid":"MONDO:0001438","xrefs":{"Monarch":{"xref_id":"0001438"}}}


id: GO:0120054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Contractions of the intestinal tract that include peristalsis (moving contents onward) and non-peristaltic movement (moving contents back and forth).","definition_xrefs":["GOC:sl","PMID:15890336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system process","termid":"GO:0022600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal motility","termid":"GO:0120054"}


id: PR:C6Y4D0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA polymerase epsilon subunit 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04411","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor C16C4.22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.22","secondary_identifiers":["UniProtKB:C6Y4D0"],"synonyms":[{"name":"Spom972h-POLE4","type":"exact"}],"termid":"PR:C6Y4D0"}


id: PATO:0001850
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being fibrous tissue that replaces normal tissue destroyed by injury or disease.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scarred","termid":"PATO:0001850"}


id: MOD:01424
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct with a compound containing a quinaldate, kynurenate, or xanthurenate group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quinaldate modified residue","termid":"MOD:01424"}


id: PBO:0029563
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_response_to_mitotic_G2/M_transition_DNA_damage_checkpoint_signaling","termid":"PBO:0029563"}


id: PBO:0076247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUV39H2 histone lysine methyltransferase","termid":"PBO:0076247"}


id: PBO:0089558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanosine 34-2'-O)-methyltransferase regulator Trm734","termid":"PBO:0089558"}


id: GO:0106110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of type B trichothecene vomitoxin, also known as deoxynivalenol, a poisonous substance produced by some species of fungi and predominantly occurs in grains such as wheat, barley and oats.","definition_xrefs":["PMID:8637056","PMID:19333439","PMID:25758923","PMID:25680507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid biosynthetic process","termid":"GO:0016106"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"epoxide metabolic process","termid":"GO:0097176"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"},{"relation_name":"is_a","term_name":"secondary alcohol biosynthetic process","termid":"GO:1902653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"vomitoxin biosynthetic process","synonyms":[{"name":"DON biosynthetic process","type":"exact"},{"name":"deoxynivalenol biosynthetic process","type":"exact"},{"name":"vomitoxin anabolism","type":"exact"},{"name":"vomitoxin biosynthesis","type":"exact"},{"name":"vomitoxin formation","type":"exact"},{"name":"vomitoxin synthesis","type":"exact"}],"termid":"GO:0106110"}


id: GO:0021876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell that contributes to the self renewal of neuroblasts in the forebrain.","definition_xrefs":["GOC:jid","PMID:16226447","GOC:cls","GOC:dgh","GO_REF:0000021","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Notch signaling pathway","termid":"GO:0007219"},{"relation_name":"part_of","term_name":"forebrain neuroblast division","termid":"GO:0021873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Notch signaling pathway involved in forebrain neuroblast division","synonyms":[{"name":"Notch signalling pathway in forebrain neuroblast division","type":"exact"}],"termid":"GO:0021876"}


id: MONDO:0011630
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the FAM161A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 28","secondary_identifiers":["MEDGEN:244030","OMIM:606068","UMLS:C1419614","GARD:10394","DOID:0110365","ICD10CM:H35.5"],"synonyms":[{"name":"FAM161A retinitis pigmentosa","type":"exact"},{"name":"RP 28","type":"related"},{"name":"RP28","type":"exact"},{"name":"retinitis pigmentosa 28","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in FAM161A","type":"exact"},{"name":"retinitis pigmentosa type 28","type":"exact"}],"termid":"MONDO:0011630","xrefs":{"Monarch":{"xref_id":"0011630"}}}


id: PBO:0028272
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_malate_dehydrogenase_(decarboxylating)_(NAD+)_activity","termid":"PBO:0028272"}


id: GO:0002662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of B cell tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tolerance induction","termid":"GO:0002644"},{"relation_name":"is_a","term_name":"regulation of B cell tolerance induction","termid":"GO:0002661"},{"relation_name":"negatively_regulates","term_name":"B cell tolerance induction","termid":"GO:0002514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of B cell tolerance induction","synonyms":[{"name":"down regulation of B cell tolerance induction","type":"exact"},{"name":"down-regulation of B cell tolerance induction","type":"exact"},{"name":"downregulation of B cell tolerance induction","type":"exact"},{"name":"inhibition of B cell tolerance induction","type":"narrow"},{"name":"negative regulation of B lymphocyte tolerance induction","type":"exact"},{"name":"negative regulation of B-cell tolerance induction","type":"exact"},{"name":"negative regulation of B-lymphocyte tolerance induction","type":"exact"}],"termid":"GO:0002662"}


id: PBO:0058931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIRLET7I host gene","termid":"PBO:0058931"}


id: GO:0060224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the process in which the developmental fate of a cell becomes restricted such that it will develop into a retinal rod cell. A retinal rod cell is one of the two photoreceptor subtypes in a camera-type eye.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate commitment","termid":"GO:0010453"},{"relation_name":"is_a","term_name":"regulation of photoreceptor cell differentiation","termid":"GO:0046532"},{"relation_name":"regulates","term_name":"retinal rod cell fate commitment","termid":"GO:0060223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of retinal rod cell fate commitment","termid":"GO:0060224"}


id: PBO:0055822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lecithin retinol acyltransferase","termid":"PBO:0055822"}


id: RO:0002400
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p has direct input c iff c is a participant in p, c is present at the start of p, and the state of c is modified during p.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_input","termid":"RO:0002233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_direct_input","termid":"RO:0002400"}


id: GO:0042052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly and arrangement of a rhabdomere within a cell. The rhabdomere is the organelle on the apical surface of a photoreceptor cell that contains the visual pigments.","definition_xrefs":["PMID:3076112","PMID:3937883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"},{"relation_name":"part_of","term_name":"compound eye photoreceptor development","termid":"GO:0042051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhabdomere development","synonyms":[{"name":"rhabdomere organization","type":"exact"}],"termid":"GO:0042052"}


id: MONDO:0004409
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that develops in the ducts of the nipple.","definition_xrefs":["NCIT:C27234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nipple carcinoma","termid":"MONDO:0003950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"nipple duct carcinoma","secondary_identifiers":["DOID:7953","UMLS:C1334967","MEDGEN:233757"],"synonyms":[{"name":"nipple duct carcinoma","type":"exact"}],"termid":"MONDO:0004409","xrefs":{"Monarch":{"xref_id":"0004409"}}}


id: PBO:0031171
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cut_following_normal_mitotic_entry","termid":"PBO:0031171"}


id: FYPO:0006306
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[121354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[121480],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}],"single_locus_phenotype":[{"annotations":[121342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[121484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000198"},{"annotations":[121318,121073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[121017],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003315"},{"annotations":[121375],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0002026"},{"annotations":[121343,120992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[121481],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which an actin filament-based process, i.e. any process that depends upon or alters the actin cytoskeleton, is abnormal.","definition_xrefs":["GO:0030029","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_03596":null,"SJAG_04280":null,"SJAG_04522":null,"SJAG_04703":null},"genotype_count":10,"genotypes_by_uniquename":{"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc15-A(L264P,P442T aa)","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild 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assayed or wild type"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04280","SJAG_04522","SJAG_03596","SJAG_01143","SJAG_02392"],"name":"abnormal actin filament-based process","references_by_uniquename":{"PMID:25866389":null,"PMID:27059155":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_03596","SJAG_04703","SJAG_02392","SJAG_01143","SJAG_04280","SJAG_04522","SJAG_02592"],"single_locus_genotype_uniquenames":["for3delta","sty1delta","mid1delta","pom1delta","rga4delta","cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal actin filament-based process during mitotic cell cycle","type":"related"},{"name":"abnormal actin filament-based process during vegetative growth","type":"exact"},{"name":"abnormal microfilament-based process","type":"related"}],"termid":"FYPO:0006306","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000198":null,"FYPO:0000231":null,"FYPO:0000729":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0002998":null,"FYPO:0003315":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0071720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 18","termid":"PBO:0071720"}


id: PBO:0052045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KN motif and ankyrin repeat domains 1 pseudogene 1","termid":"PBO:0052045"}


id: GO:0106173
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of a COPII-coated endocytic vesicle.","definition_xrefs":["GOC:pde","PMID:21172817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"COPII-coated vesicle lumen","termid":"GO:0106173"}


id: PBO:0042023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 81","termid":"PBO:0042023"}


id: PBO:0043161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell death inducing DFFA like effector a","termid":"PBO:0043161"}


id: PR:Q9C0U6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A xylulose kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04422","PANTHER:PTHR10196:SF10","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xylulose kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCPJ732.02c","secondary_identifiers":["UniProtKB:Q9C0U6"],"synonyms":[{"name":"Spom972h-XYLB","type":"exact"},{"name":"Xylulokinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9C0U6"}


id: MONDO:0015868
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of breast neoplasm that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare breast tumor (obsolete MONDO:0015868)","secondary_identifiers":["Orphanet:180250"],"synonyms":[{"name":"rare breast cancer","type":"narrow"},{"name":"rare breast neoplasm","type":"exact"}],"termid":"MONDO:0015868","xrefs":{"Monarch":{"xref_id":"0015868"}}}


id: PR:O43082
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC947.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA-processing protein 14-C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC947.07","synonyms":[{"name":"Spom972h-SPBC947.07","type":"exact"},{"name":"ribosome biogenesis protein rrp14-C (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43082"}


id: GO:0090420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving naphthalene-containing compounds.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete naphthalene-containing compound metabolic process (obsolete GO:0090420)","termid":"GO:0090420"}


id: GO:0141135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts a chemokine signaling pathway, a G protein-coupled receptor signal transduction pathway activated by a chemokine. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:16581912"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host G protein-coupled receptor signal transduction","termid":"GO:0075120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host chemokine signal transduction pathway","termid":"GO:0141135"}


id: MONDO:0032665
data:
  {"annotated_genes":["SJAG_00886"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87834],"is_not":false,"summary":null,"term":"MONDO:0032665"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00886":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025","MONDO:0037792"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal recessive 68","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1648490","OMIM:618302","DOID:0081229","UMLS:C4749033"],"synonyms":[{"name":"INTELLECTUAL DEVELOPMENTAL DISORDER, AUTOSOMAL RECESSIVE 68","type":"related"},{"name":"MRT68","type":"related"},{"name":"Mental Retardation, Autosomal Recessive 68","type":"related"}],"termid":"MONDO:0032665","terms_by_termid":{"MONDO:0032665":null},"xrefs":{"Monarch":{"xref_id":"0032665"}}}


id: GO:0102132
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NADP + a 3R-hydroxypimeloyl-[acp] methyl ester = NADPH + H+ + a 3-oxo-pimeloyl-[acp] methyl ester.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxo-pimeloyl-[acp] methyl ester reductase activity (obsolete GO:0102132)","termid":"GO:0102132"}


id: PBO:0044028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CS pseudogene 2","termid":"PBO:0044028"}


id: GO:0045463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the R8 photoreceptor over time, from its formation to the mature structure. The R8 photoreceptor is the founding receptor of each ommatidium.","definition_xrefs":["PMID:11880339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound eye photoreceptor development","termid":"GO:0042051"},{"relation_name":"part_of","term_name":"R8 cell differentiation","termid":"GO:0045465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"R8 cell development","termid":"GO:0045463"}


id: PBO:0034184
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ends_with","termid":"PBO:0034184"}


id: PBO:0012251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIP complex subunit 4, Csc4","termid":"PBO:0012251"}


id: MONDO:1010406
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary increased feed intake leading to fatty liver in pigs due to a variation in the MC4R gene.","definition_xrefs":["PMID:31629472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"hepatic lipidosis, non-human animal","termid":"MONDO:1011429"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperphagia leading to hepatic steatosis, pig","secondary_identifiers":["OMIA:002217-9823"],"termid":"MONDO:1010406","xrefs":{"Monarch":{"xref_id":"1010406"}}}


id: MONDO:0006981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Subacute inflammation of the endocardium. Streptococcus viridans is the usual etiologic agent of subacute bacterial endocarditis. The distinction between \\\"acute\\\" and \\\"subacute\\\" endocarditis has traditionally been made based on the pathogenic organism and clinical presentation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infective endocarditis","termid":"MONDO:0000565"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"subacute bacterial endocarditis","secondary_identifiers":["EFO:1001193","SCTID:73774007","MESH:D004698","UMLS:C0014122","MEDGEN:41780","icd11.foundation:933942548","DOID:4562","NCIT:C34583","MedDRA:10042271"],"synonyms":[{"name":"SBE","type":"exact"},{"name":"SBE - Subacute bacterial endocarditis","type":"exact"},{"name":"Subacute bacterial endocarditis","type":"exact"},{"name":"Subacute endocarditis, lenta","type":"exact"},{"name":"endocarditis lenta","type":"exact"}],"termid":"MONDO:0006981","xrefs":{"Monarch":{"xref_id":"0006981"}}}


id: MONDO:0700098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplasm, non-human animal","termid":"MONDO:0700098","xrefs":{"Monarch":{"xref_id":"0700098"}}}


id: PBO:0057139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 219a-2","termid":"PBO:0057139"}


id: GO:0005000
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with vasopressin to initiate a change in cell activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"vasopressin receptor activity","secondary_identifiers":["GO:0016931"],"synonyms":[{"name":"vasopressin activated calcium mobilizing receptor activity","type":"narrow"}],"termid":"GO:0005000"}


id: GO:1904599
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to advanced glycation end-product.","definition_xrefs":["GO_REF:0000067","GOC:krc","PMID:1650387","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"advanced glycation end-product binding","termid":"GO:1904599"}


id: FYPO:0004086
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which centromere clustering is abnormal during one or both meiotic nuclear divisions. Centromeres are normally located in one or two clusters away from the spindle pole body during meiosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"},{"relation_name":"is_a","term_name":"abnormal protein localization during meiotic cell cycle","termid":"FYPO:0004094"},{"relation_name":"is_a","term_name":"abnormal meiotic chromosome organization","termid":"FYPO:0006759"},{"relation_name":"is_a","term_name":"abnormal microtubule-based movement","termid":"FYPO:0007163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000641","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abnormal meiotic centromere clustering","synonyms":[{"name":"abnormal centromere clustering during meiosis","type":"exact"},{"name":"abnormal chromosome retrieval during meiosis","type":"related"},{"name":"abnormal kinetochore retrieval during meiosis","type":"related"},{"name":"increased unclustered centromeres during meiosis","type":"related"}],"termid":"FYPO:0004086"}


id: PBO:0073343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 5","termid":"PBO:0073343"}


id: GO:0005112
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Notch (N) protein, a surface receptor.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"Notch binding","synonyms":[{"name":"N binding","type":"exact"},{"name":"N ligand","type":"narrow"},{"name":"Notch ligand","type":"narrow"},{"name":"Notch receptor binding","type":"exact"}],"termid":"GO:0005112"}


id: PBO:0002598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk2 (predicted)","termid":"PBO:0002598"}


id: GO:0005963
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An intracellular enzyme complex that catalyzes the removal of serine- or threonine-bound phosphate groups from a wide range of phosphoproteins, including a number of enzymes that have been phosphorylated under the action of a kinase.","definition_xrefs":["PMID:22343722","PMID:17517611"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase complex","termid":"GO:0008287"},{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"magnesium-dependent protein serine/threonine phosphatase complex","termid":"GO:0005963"}


id: PBO:0059186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRFAP1 pseudogene 1","termid":"PBO:0059186"}


id: GO:0048738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of cardiac muscle over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GOC:lm","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle tissue development","termid":"GO:0014706"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle tissue development","synonyms":[{"name":"heart muscle development","type":"exact"}],"termid":"GO:0048738"}


id: PBO:0060655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCOR1 pseudogene 4","termid":"PBO:0060655"}


id: MONDO:0017909
data:
  {"annotated_genes":["SJAG_01351"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009947"},{"annotations":[88000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009284"}]},"cv_name":"mondo","definition":"Glutathione synthetase deficiency is characterized by hemolytic anemia, associated with metabolic acidosis and 5-oxoprolinuria in moderate forms, and with progressive neurological symptoms and recurrent bacterial infections in the most severe forms.","definition_xrefs":["Orphanet:32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defective phagocytic cell engulfment","termid":"MONDO:0024626"},{"relation_name":"is_a","term_name":"inherited glutathione metabolism disease","termid":"MONDO:0040566"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01351":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019241"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005066","MONDO:0019241"],"is_obsolete":false,"name":"inherited glutathione synthetase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C128193","GARD:10047","SCTID:234589002","MESH:C536835","DOID:0080699"],"synonyms":[{"name":"5-oxoprolinuria","type":"exact"},{"name":"GSSD","type":"exact"},{"name":"glutathione synthetase deficiency","type":"exact"},{"name":"inborn error of glutathione synthase activity","type":"exact"},{"name":"inborn glutathione synthase activity disorder","type":"exact"},{"name":"inherited glutathione synthetase deficiency","type":"exact"},{"name":"oxoprolinase deficiency","type":"related"},{"name":"pyroglutamic aciduria","type":"exact"},{"name":"pyroglutamicaciduria","type":"exact"},{"name":"rare inborn error of glutathione synthase activity","type":"exact"}],"termid":"MONDO:0017909","terms_by_termid":{"MONDO:0009284":null,"MONDO:0009947":null},"xrefs":{"Monarch":{"xref_id":"0017909"}}}


id: GO:0071028
data:
  {"annotated_genes":["SJAG_01191","SJAG_03448","SJAG_01540","SJAG_04006","SJAG_04321","SJAG_02720","SJAG_03179","SJAG_00854","SJAG_00425","SJAG_04768","SJAG_04500","SJAG_04084","SJAG_02275","SJAG_03454","SJAG_02723","SJAG_01529","SJAG_00456","SJAG_04824","SJAG_03984","SJAG_02622","SJAG_00961","SJAG_04198","SJAG_01867","SJAG_04025","SJAG_01331","SJAG_01521","SJAG_04153","SJAG_01431","SJAG_02382","SJAG_01818","SJAG_00452","SJAG_05243","SJAG_02005","SJAG_03745","SJAG_02879","SJAG_04818","SJAG_01412","SJAG_03883","SJAG_04601"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64176,73062,73357,74182,74948,76065,90897,91261,94888,96776,98346,102856,117305,117744],"is_not":false,"summary":null,"term":"GO:0071028"},{"annotations":[91602],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0120271"},{"annotations":[92679,89302,93681,100904,111102,106122,98541,94056,113153,119981,111083,92604,109291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033621"},{"annotations":[72011,95255,119982,99053,76330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071031"},{"annotations":[118188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071032"},{"annotations":[92605,111632,90652,89303,111103,119983,117411,96817,108138,94178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071030"},{"annotations":[108489],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0120272"}]},"cv_name":"biological_process","definition":"A process that identifies and degrades defective or aberrant mRNAs within the nucleus.","definition_xrefs":["GOC:dgf","PMID:18644474","GOC:krc","PMID:11586364","PMID:14718167","PMID:12417728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear-transcribed mRNA catabolic process","termid":"GO:0000956"},{"relation_name":"is_a","term_name":"nuclear RNA surveillance","termid":"GO:0071027"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00425":null,"SJAG_00452":null,"SJAG_00456":null,"SJAG_00854":null,"SJAG_00961":null,"SJAG_01191":null,"SJAG_01331":null,"SJAG_01412":null,"SJAG_01431":null,"SJAG_01521":null,"SJAG_01529":null,"SJAG_01540":null,"SJAG_01818":null,"SJAG_01867":null,"SJAG_02005":null,"SJAG_02275":null,"SJAG_02382":null,"SJAG_02622":null,"SJAG_02720":null,"SJAG_02723":null,"SJAG_02879":null,"SJAG_03179":null,"SJAG_03448":null,"SJAG_03454":null,"SJAG_03745":null,"SJAG_03883":null,"SJAG_03984":null,"SJAG_04006":null,"SJAG_04025":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04198":null,"SJAG_04321":null,"SJAG_04500":null,"SJAG_04601":null,"SJAG_04768":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_05243":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016071"],"is_obsolete":false,"name":"nuclear mRNA surveillance","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0071048","GO:0071033","GO:0071049"],"synonyms":[{"name":"nuclear aberrant mRNA catabolic process","type":"exact"},{"name":"nuclear mRNA quality control","type":"exact"},{"name":"nuclear retention of pre-mRNA at the site of transcription","type":"narrow"},{"name":"nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription","type":"narrow"},{"name":"nuclear retention of unspliced pre-mRNA at the site of transcription","type":"narrow"}],"termid":"GO:0071028","terms_by_termid":{"GO:0033621":null,"GO:0071028":null,"GO:0071030":null,"GO:0071031":null,"GO:0071032":null,"GO:0120271":null,"GO:0120272":null}}


id: PBO:0120091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Minus-end-directed microtubule motor; functions in mitosis and meiosis; localizes to the spindle pole body and localization is dependent on functional Cik1p; required for nuclear fusion during mating; required for ER-associated degradation (ERAD); potential Cdc28p substrate; kinesin 14 family member with a C-terminal motor domain","termid":"PBO:0120091"}


id: GO:0015953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which a pyrimidine nucleotide is synthesized from another pyrimidine nucleotide.","definition_xrefs":["ISBN:0306444747","ISBN:0471394831","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide metabolic process","termid":"GO:0006220"},{"relation_name":"is_a","term_name":"nucleobase-containing small molecule interconversion","termid":"GO:0015949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyrimidine nucleotide interconversion","termid":"GO:0015953"}


id: GO:0051923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a sulfate group to a molecule.","definition_xrefs":["Wikipedia:Sulfation"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"sulfation","synonyms":[{"name":"phase II metabolism","type":"broad"},{"name":"sulfonation","type":"exact"},{"name":"sulfur addition","type":"exact"},{"name":"sulphation","type":"exact"},{"name":"sulphur addition","type":"exact"}],"termid":"GO:0051923"}


id: FYPO:0004042
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell forms pieces of a septum rather than a septum that completely bisects the cell.","definition_xrefs":["PomBase:mah","PMID:21931816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete septum","termid":"FYPO:0005870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"fragmented septum","synonyms":[{"name":"fragmented septum during mitotic cell cycle","type":"related"},{"name":"fragmented septum during vegetative growth","type":"exact"}],"termid":"FYPO:0004042"}


id: PBO:0063546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet and endothelial cell adhesion molecule 1","termid":"PBO:0063546"}


id: GO:0048647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which individuals that have the potential to develop any of several possible distinct developmental paths have their individual developmental fates determined in response to environmental and/or genetic cues.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polyphenic determination","termid":"GO:0048647"}


id: PBO:0072705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain containing 1 pseudogene 1","termid":"PBO:0072705"}


id: FYPO:0005649
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the duration of localization of a protein to the telomere of a chromosome is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased duration of protein localization to telomere","synonyms":[{"name":"increased duration of protein localisation to telomere","type":"exact"},{"name":"increased duration of protein localization to chromosome, telomeric region","type":"exact"},{"name":"increased duration of protein localization to telomere during mitotic cell cycle","type":"related"},{"name":"increased duration of protein localization to telomere during vegetative growth","type":"exact"},{"name":"increased duration of protein localization to telomeric region","type":"exact"},{"name":"prolonged protein localization to telomere","type":"exact"}],"termid":"FYPO:0005649"}


id: MONDO:0024381
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A circadian sleep disorder that results from traveling across time zones.","direct_ancestors":[{"relation_name":"is_a","term_name":"circadian rhythm sleep disorder","termid":"MONDO:0024361"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circadian rhythm sleep disorder, jet lag type","secondary_identifiers":["UMLS:C0231311","ICD10CM:G47.25","MEDGEN:115901"],"synonyms":[{"name":"jet lag","type":"exact"}],"termid":"MONDO:0024381","xrefs":{"Monarch":{"xref_id":"0024381"}}}


id: GO:1990094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The positive regulation of the receptor clustering process in which N-methyl-D-aspartate (NMDA) receptors are localized to distinct domains in the cell membrane.","definition_xrefs":["PMID:18442977"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of N-methyl-D-aspartate receptor clustering (obsolete GO:1990094)","synonyms":[{"name":"positive regulation of N-methyl-D-aspartate receptor clustering","type":"exact"},{"name":"positive regulation of NMDA receptor clustering","type":"exact"}],"termid":"GO:1990094"}


id: MONDO:0044321
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural heart defects and renal anomalies syndrome","secondary_identifiers":["MEDGEN:1387412","OMIM:617478","UMLS:C4479549"],"synonyms":[{"name":"SHDRA","type":"related"},{"name":"structural heart defects and renal anomalies syndrome","type":"exact"}],"termid":"MONDO:0044321","xrefs":{"Monarch":{"xref_id":"0044321"}}}


id: GO:1902433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of water channel activity that is involved in maintenance of lens transparency.","definition_xrefs":["GOC:nhn","GOC:TermGenie","PMID:22095752"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of water channel activity involved in maintenance of lens transparency (obsolete GO:1902433)","synonyms":[{"name":"activation of aquaporin involved in maintenance of lens transparency","type":"narrow"},{"name":"activation of aquaporin involved in maintenance of ocular lens transparency","type":"narrow"},{"name":"activation of aquaporin involved in preservation of lens transparency","type":"narrow"},{"name":"activation of water channel activity involved in maintenance of lens transparency","type":"narrow"},{"name":"activation of water channel activity involved in maintenance of ocular lens transparency","type":"narrow"},{"name":"activation of water channel activity involved in preservation of lens transparency","type":"narrow"},{"name":"aquaporin activation involved in maintenance of lens transparency","type":"narrow"},{"name":"aquaporin activation involved in maintenance of ocular lens transparency","type":"narrow"},{"name":"aquaporin activation involved in preservation of lens transparency","type":"narrow"},{"name":"positive regulation of aquaporin involved in maintenance of lens transparency","type":"narrow"},{"name":"positive regulation of aquaporin involved in maintenance of ocular lens transparency","type":"narrow"},{"name":"positive regulation of aquaporin involved in preservation of lens transparency","type":"narrow"},{"name":"positive regulation of water channel activity involved in maintenance of ocular lens transparency","type":"exact"},{"name":"positive regulation of water channel activity involved in preservation of lens transparency","type":"exact"},{"name":"up regulation of aquaporin involved in maintenance of lens transparency","type":"narrow"},{"name":"up regulation of aquaporin involved in maintenance of ocular lens transparency","type":"narrow"},{"name":"up regulation of aquaporin involved in preservation of lens transparency","type":"narrow"},{"name":"up regulation of water channel activity involved in maintenance of lens transparency","type":"exact"},{"name":"up regulation of water channel activity involved in maintenance of ocular lens transparency","type":"exact"},{"name":"up regulation of water channel activity involved in preservation of lens transparency","type":"exact"},{"name":"up-regulation of aquaporin involved in maintenance of lens transparency","type":"narrow"},{"name":"up-regulation of aquaporin involved in maintenance of ocular lens transparency","type":"narrow"},{"name":"up-regulation of aquaporin involved in preservation of lens transparency","type":"narrow"},{"name":"up-regulation of water channel activity involved in maintenance of lens transparency","type":"exact"},{"name":"up-regulation of water channel activity involved in maintenance of ocular lens transparency","type":"exact"},{"name":"up-regulation of water channel activity involved in preservation of lens transparency","type":"exact"},{"name":"upregulation of aquaporin involved in maintenance of lens transparency","type":"narrow"},{"name":"upregulation of aquaporin involved in maintenance of ocular lens transparency","type":"narrow"},{"name":"upregulation of aquaporin involved in preservation of lens transparency","type":"narrow"},{"name":"upregulation of water channel activity involved in maintenance of lens transparency","type":"exact"},{"name":"upregulation of water channel activity involved in maintenance of ocular lens transparency","type":"exact"},{"name":"upregulation of water channel activity involved in preservation of lens transparency","type":"exact"}],"termid":"GO:1902433"}


id: GO:0042379
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a chemokine receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"},{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"chemokine receptor binding","synonyms":[{"name":"chemokine receptor ligand","type":"narrow"}],"termid":"GO:0042379"}


id: MONDO:1012378
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary pancreatitis, non-human animal","termid":"MONDO:1011679"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary pancreatitis, dog","secondary_identifiers":["OMIA:001403-9615"],"termid":"MONDO:1012378","xrefs":{"Monarch":{"xref_id":"1012378"}}}


id: GO:0010297
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a heteropolysaccharide, a glycan composed of more than one type of monosaccharide residue.","definition_xrefs":["PMID:16640603"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"heteropolysaccharide binding","synonyms":[{"name":"heteroglycan binding","type":"exact"}],"termid":"GO:0010297"}


id: GO:0031626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to beta-endorphin, a peptide generated by the cleavage of pro-opiomelanocortin.","definition_xrefs":["GOC:nln","PMID:6267560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"beta-endorphin binding","termid":"GO:0031626"}


id: PBO:0036311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP-independent ER targeting protein Snd3b (predicted)","termid":"PBO:0036311"}


id: PBO:0061156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NmrA like redox sensor 1","termid":"PBO:0061156"}


id: GO:0034964
data:
  {"annotated_genes":["SJAG_04754"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[82035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000495"}]},"cv_name":"biological_process","definition":"Any process involved in the conversion of a primary box H/ACA type small RNA transcript into a mature box H/ACA RNA.","definition_xrefs":["GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"box H/ACA sno(s)RNA metabolic process","termid":"GO:0033979"},{"relation_name":"is_a","term_name":"sno(s)RNA processing","termid":"GO:0043144"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016074"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016074"],"is_obsolete":false,"name":"box H/ACA sno(s)RNA processing","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"box H/ACA sRNA processing","type":"narrow"},{"name":"box H/ACA snoRNA processing","type":"narrow"}],"termid":"GO:0034964","terms_by_termid":{"GO:0000495":null}}


id: MONDO:0040566
data:
  {"annotated_genes":["SJAG_01162","SJAG_03316","SJAG_00988","SJAG_01351","SJAG_01995","SJAG_01216","SJAG_01612"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009825"},{"annotations":[88015,88016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009285"},{"annotations":[87691],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009259"},{"annotations":[87564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009947"},{"annotations":[88000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009284"},{"annotations":[88662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019531"},{"annotations":[86934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009593"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of glutathione metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of the gamma-glutamyl cycle","termid":"MONDO:0019241"},{"relation_name":"is_a","term_name":"sulfur metabolism disease","termid":"MONDO:0056803"},{"relation_name":"is_a","term_name":"disorder of peptide and amine metabolism","termid":"MONDO:0100473"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00988":null,"SJAG_01162":null,"SJAG_01216":null,"SJAG_01351":null,"SJAG_01612":null,"SJAG_01995":null,"SJAG_03316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019241"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019241"],"is_obsolete":false,"name":"inherited glutathione metabolism disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:541346","SCTID:72262000","UMLS:C0268518"],"synonyms":[{"name":"disorder of glutathione metabolism","type":"exact"},{"name":"glutathione metabolism disorder, inherited","type":"exact"},{"name":"inborn error of glutathione metabolic process","type":"exact"},{"name":"inborn error of glutathione metabolism","type":"exact"},{"name":"inborn glutathione metabolic process disorder","type":"exact"},{"name":"rare inborn error of glutathione metabolic process","type":"exact"}],"termid":"MONDO:0040566","terms_by_termid":{"MONDO:0009259":null,"MONDO:0009284":null,"MONDO:0009285":null,"MONDO:0009593":null,"MONDO:0009825":null,"MONDO:0009947":null,"MONDO:0019531":null},"xrefs":{"Monarch":{"xref_id":"0040566"}}}


id: GO:0005822
data:
  {"annotated_genes":["SJAG_01215","SJAG_05196","SJAG_03835","SJAG_02609","SJAG_02332","SJAG_07018"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[110685,102802,111445,104627,113281,112427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061497"}]},"cv_name":"cellular_component","definition":"One of three laminate structures that form the spindle pole body; the inner plaque is in the nucleus.","definition_xrefs":["ISBN:0879693568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"spindle pole body","termid":"GO:0005816"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01215":null,"SJAG_02332":null,"SJAG_02609":null,"SJAG_03835":null,"SJAG_05196":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005816"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630","GO:0005816"],"is_obsolete":false,"name":"inner plaque of spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005822","terms_by_termid":{"GO:0061497":null}}


id: MONDO:0010770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-activating enzyme, Y-linked","secondary_identifiers":["MEDGEN:326389","UMLS:C1839046","OMIM:489000"],"synonyms":[{"name":"Ube1Y","type":"related"},{"name":"ubiquitin-activating enzyme, Y-linked","type":"exact"}],"termid":"MONDO:0010770","xrefs":{"Monarch":{"xref_id":"0010770"}}}


id: MONDO:0002050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melancholy feeling of sadness and despair.","definition_xrefs":["NCIT:C2982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mood disorder","termid":"MONDO:0005371"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"depressive disorder","secondary_identifiers":["ICD9:311","MESH:D003866","MFOMD:0000013","SCTID:35489007","DOID:1596","ICD10CM:F32","MEDGEN:4229","UMLS:C0011581"],"synonyms":[{"name":"depression","type":"exact"},{"name":"melancholia","type":"related"},{"name":"melancholias","type":"related"},{"name":"mental depression","type":"exact"},{"name":"syndrome, depressive","type":"related"},{"name":"syndromes, depressive","type":"related"}],"termid":"MONDO:0002050","xrefs":{"Monarch":{"xref_id":"0002050"}}}


id: MONDO:0000331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with Rickettsia helvetica.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spotted fever","termid":"MONDO:0001195"},{"relation_name":"is_a","term_name":"tick-borne infectious disease","termid":"MONDO:0025294"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rickettsia helvetica spotted fever","secondary_identifiers":["DOID:0050484"],"synonyms":[{"name":"Rickettsia helvetica aneruptive fever","type":"exact"},{"name":"Rickettsia helvetica caused disease or disorder","type":"exact"},{"name":"Rickettsia helvetica disease or disorder","type":"exact"},{"name":"Rickettsia helvetica infectious disease","type":"exact"},{"name":"aneruptive fever","type":"exact"}],"termid":"MONDO:0000331","xrefs":{"Monarch":{"xref_id":"0000331"}}}


id: PBO:0004590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA specific adenosine deaminase subunit Tad2","termid":"PBO:0004590"}


id: GO:0052114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The responsive adjustment of an organism to the pH conditions in or around its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete adaptation to host pH environment (obsolete GO:0052114)","synonyms":[{"name":"adaptation to host pH environment","type":"exact"},{"name":"pH tolerance to host environment","type":"exact"}],"termid":"GO:0052114"}


id: PR:000027517
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ase1 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase spindle elongation protein 1","pombase_gene_id":"SPAPB1A10.09","synonyms":[{"name":"Ase1p","type":"exact"},{"name":"ase1","type":"exact"}],"termid":"PR:000027517"}


id: PBO:0001835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-independent regulatory protein Pac2","termid":"PBO:0001835"}


id: PBO:0057624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1197","termid":"PBO:0057624"}


id: MONDO:0009249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary fructose intolerance (HFI) is an autosomal recessive disorder of fructose metabolism, resulting from a deficiency of hepatic fructose-1-phosphate aldolase activity and leading to gastrointestinal disorders and postprandial hypoglycemia following fructose ingestion. HFI is a benign condition when treated, but it is life-threatening and potentially fatal if left untreated.","definition_xrefs":["Orphanet:469"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete congenital intestinal transport defect (obsolete MONDO:0015178)","termid":"MONDO:0015178"},{"relation_name":"excluded_subClassOf","term_name":"disorder of carbohydrate transmembrane transport and absorption","termid":"MONDO:0017706"},{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"disorder of fructose metabolism","termid":"MONDO:0017689"},{"relation_name":"is_a","term_name":"disorder of galactose and fructose metabolism","termid":"MONDO:0800152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"hereditary fructose intolerance","secondary_identifiers":["GARD:6622","MedDRA:10019878","NCIT:C84720","ICD10CM:E74.12","OMIM:229600","UMLS:C0016751","icd11.foundation:1925240365","ICD9:271.2","MEDGEN:42105","NANDO:2200531","DOID:9869","NORD:1166","SCTID:20052008"],"synonyms":[{"name":"Aldob deficiency","type":"related"},{"name":"Fructosaemia","type":"exact"},{"name":"Fructose Intolerance, Hereditary","type":"exact"},{"name":"aldolase B deficiency","type":"related"},{"name":"fructose intolerance","type":"exact"},{"name":"fructose intolerance, hereditary","type":"exact"},{"name":"fructose-1,6-bisphosphate aldolase B deficiency","type":"exact"},{"name":"fructose-1-phosphate aldolase deficiency","type":"related"},{"name":"fructosemia","type":"exact"},{"name":"hereditary fructose intolerance","type":"exact"},{"name":"hereditary fructose intolerance syndrome","type":"exact"},{"name":"hereditary fructose-1-phosphate aldolase deficiency","type":"exact"},{"name":"hereditary fructosemia","type":"exact"}],"termid":"MONDO:0009249","xrefs":{"Monarch":{"xref_id":"0009249"}}}


id: GO:2000935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellotriose metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of cellotriose metabolic process","termid":"GO:2000933"},{"relation_name":"positively_regulates","term_name":"cellotriose metabolic process","termid":"GO:2000893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of cellotriose metabolic process","synonyms":[{"name":"positive regulation of cellotriose metabolism","type":"exact"}],"termid":"GO:2000935"}


id: GO:0033999
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dermatan sulfate = n 4-deoxy-beta-D-gluc-4-enuronosyl-(1,3)-N-acetyl-D-galactosamine 4-sulfate. This reaction is the eliminative cleavage of dermatan sulfate containing 1,4-beta-D-hexosaminyl and 1,3-beta-D-glucurosonyl or 1,3-alpha-L-iduronosyl linkages to disaccharides containing 4-deoxy-beta-D-gluc-4-enuronosyl groups to yield a 4,5-unsaturated dermatan-sulfate disaccharide (DeltaUA-GalNAC-4S). Chondroitin sulfate B is also known as dermatan sulfate.","definition_xrefs":["EC:4.2.2.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"chondroitin B lyase activity","synonyms":[{"name":"ChnB","type":"related"},{"name":"chonB","type":"related"},{"name":"chondroitinase B activity","type":"related"},{"name":"dermatan sulfate lyase activity","type":"exact"}],"termid":"GO:0033999"}


id: PR:O74467
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- set5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain-containing protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.05","synonyms":[{"name":"Spom972h-set5","type":"exact"}],"termid":"PR:O74467"}


id: GO:0042913
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of group A colicins (colicins E1, E2, E3, A, K, and N) from one side of a membrane to the other.","definition_xrefs":["GOC:jl","GOC:mtg_transport","ISBN:0815340729","PMID:9171417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colicin transmembrane transporter activity","termid":"GO:0042912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"group A colicin transmembrane transporter activity","termid":"GO:0042913"}


id: MONDO:0958235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Ullrich congenital muscular dystrophy","termid":"MONDO:0000355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"Ullrich congenital muscular dystrophy 1B","secondary_identifiers":["OMIM:620727","UMLS:C5935582","DOID:0060942","MEDGEN:1859300"],"termid":"MONDO:0958235","xrefs":{"Monarch":{"xref_id":"0958235"}}}


id: PBO:0039519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD33B antisense RNA 1","termid":"PBO:0039519"}


id: GO:1904392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ciliary neurotrophic factor stimulus.","definition_xrefs":["PMID:16914133","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"response to ciliary neurotrophic factor","termid":"GO:1904391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to ciliary neurotrophic factor","termid":"GO:1904392"}


id: MONDO:0010342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autism, susceptiblity to","termid":"MONDO:0020836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autism, susceptibility to, X-linked 3","secondary_identifiers":["UMLS:C1845336","MEDGEN:335161","OMIM:300496"],"synonyms":[{"name":"AUTSX3","type":"related"},{"name":"autism susceptibility, X-linked 3","type":"exact"},{"name":"autism, susceptibility to, X-linked 3","type":"exact"},{"name":"autism, susceptibility to, X-linked type 3","type":"exact"},{"name":"susceptibility to X-linked autism 3","type":"related"}],"termid":"MONDO:0010342","xrefs":{"Monarch":{"xref_id":"0010342"}}}


id: MONDO:0022819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital arteriovenous shunt (obsolete MONDO:0022819)","termid":"MONDO:0022819","xrefs":{"Monarch":{"xref_id":"0022819"}}}


id: PBO:0063655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 1 pseudogene 12","termid":"PBO:0063655"}


id: MONDO:0018476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"combined dystonia","termid":"MONDO:0020065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"dystonia-aphonia syndrome","secondary_identifiers":["Orphanet:412217","UMLS:C5190573","GARD:21739","MEDGEN:1675660"],"termid":"MONDO:0018476","xrefs":{"Monarch":{"xref_id":"0018476"}}}


id: PBO:0040459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase cation transporting 13A2","termid":"PBO:0040459"}


id: PBO:0116320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase delta subunit (central stalk) Atp16","termid":"PBO:0116320"}


id: PBO:0065241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 14 like","termid":"PBO:0065241"}


id: GO:2000697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of epithelial cell differentiation involved in kidney development.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation","termid":"GO:0030857"},{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000696"},{"relation_name":"negatively_regulates","term_name":"epithelial cell differentiation involved in kidney development","termid":"GO:0035850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000697"}


id: FYPO:0001079
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of galactomannan measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal polysaccharide level","termid":"FYPO:0001077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal galactomannan level","synonyms":[{"name":"normal cellular galactomannan level","type":"exact"},{"name":"normal galactomannan accumulation","type":"related"},{"name":"normal galactomannan level during mitotic cell cycle","type":"related"},{"name":"normal galactomannan level during vegetative growth","type":"exact"}],"termid":"FYPO:0001079"}


id: PBO:0085445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Positive regulator of allophanate inducible genes; binds a dodecanucleotide sequence upstream of all genes that are induced by allophanate; contains an UISALL DNA-binding, a transcriptional activation, and a coiled-coil domain","termid":"PBO:0085445"}


id: SO:1001270
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1001270 stop_codon_redefinition_as_pyrrolysine (obsolete SO:1001270)","termid":"SO:1001270"}


id: MONDO:0013598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myostatin-related muscle hypertrophy is a rare condition characterized by reduced body fat and increased muscle size. Affected individuals have up to twice the usual amount of muscle mass in their bodies. They also tend to have increased muscle strength. This condition is not known to cause any medical problems, and affected individuals are intellectually normal. Myostatin-related muscle hypertrophy is caused by mutations in the MSTN gene. It follows an incomplete autosomal dominant pattern of inheritance.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"muscle tissue disorder","termid":"MONDO:0003939"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myostatin-related muscle hypertrophy","secondary_identifiers":["HGNC:4223","UMLS:C2931112","MEDGEN:418994","OMIM:614160","MESH:C536106","DOID:0111072","ICD9:756.89","Orphanet:275534","SCTID:699185005"],"synonyms":[{"name":"MSLHP","type":"exact"},{"name":"muscle hypertrophy","type":"related"}],"termid":"MONDO:0013598","xrefs":{"Monarch":{"xref_id":"0013598"}}}


id: MONDO:1010344
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Peters anomaly that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"},{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"disorder of visual system, non-human animal","termid":"MONDO:1011316"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peters anomaly, non-human animal","secondary_identifiers":["OMIA:001914"],"termid":"MONDO:1010344","xrefs":{"Monarch":{"xref_id":"1010344"}}}


id: GO:0043897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains.","definition_xrefs":["EC:3.2.1.133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"glucan 1,4-alpha-maltohydrolase activity","secondary_identifiers":["MetaCyc:3.2.1.133-RXN"],"synonyms":[{"name":"1,4-alpha-D-glucan alpha-maltohydrolase activity","type":"exact"},{"name":"glucan-1,4-alpha-maltohydrolase activity","type":"exact"},{"name":"maltogenic alpha-amylase activity","type":"exact"}],"termid":"GO:0043897"}


id: MONDO:0010875
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pachydermodactyly, familial","secondary_identifiers":["UMLS:C1838218","OMIM:600356","MEDGEN:324974","MESH:C563947"],"synonyms":[{"name":"pachydermodactyly, familial","type":"exact"}],"termid":"MONDO:0010875","xrefs":{"Monarch":{"xref_id":"0010875"}}}


id: PBO:0047131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM170B antisense RNA 1","termid":"PBO:0047131"}


id: FYPO:0001657
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of serine into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal serine import","synonyms":[{"name":"abnormal L-serine import","type":"exact"},{"name":"abnormal L-serine import across plasma membrane","type":"exact"},{"name":"abnormal serine import during mitotic cell cycle","type":"related"},{"name":"abnormal serine import during vegetative growth","type":"exact"},{"name":"abnormal serine import into cell","type":"exact"},{"name":"abnormal serine uptake","type":"exact"}],"termid":"FYPO:0001657"}


id: GO:0050623
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-canadine + 2 NADP+ = berberine + H+ + 2 NADPH.","definition_xrefs":["RHEA:21268","EC:1.5.1.31"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"berberine reductase activity","secondary_identifiers":["KEGG_REACTION:R07169","MetaCyc:1.5.1.31-RXN"],"synonyms":[{"name":"(R)-canadine synthase activity","type":"related"},{"name":"(R)-tetrahydroberberine:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0050623"}


id: PBO:0051277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-8","termid":"PBO:0051277"}


id: GO:0097066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a thyroid hormone stimulus.","definition_xrefs":["PMID:9916872","GOC:sjw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to thyroid hormone","synonyms":[{"name":"response to thyroid hormone stimulus","type":"exact"}],"termid":"GO:0097066"}


id: GO:0002064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an epithelial cell over time, from its formation to the mature structure. An epithelial cell is a cell usually found in a two-dimensional sheet with a free surface.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell development","termid":"GO:0002064"}


id: PBO:0073298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 20","termid":"PBO:0073298"}


id: MONDO:0009371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"3 hydroxyisobutyric aciduria is characterized by ketoacidotic episodes, cerebral anomalies and facial dysmorphism. It is an organic aciduria that involves valine metabolism. Thirteen cases have been described in the literature so far. Transmission is thought to be autosomal recessive.","definition_xrefs":["Orphanet:939"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic organic aciduria","termid":"MONDO:0019215"},{"relation_name":"is_a","term_name":"inborn disorder of branched-chain amino acid metabolism","termid":"MONDO:0019242"},{"relation_name":"is_a","term_name":"valine metabolism disease","termid":"MONDO:0037870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"3-hydroxyisobutyric aciduria","secondary_identifiers":["ICD9:791.9","MESH:C535312","OMIM:236795","UMLS:C0342737","SCTID:237957007","MEDGEN:90996","icd11.foundation:1293648631","GARD:5662"],"synonyms":[{"name":"3-hydroxyisobutyric aciduria","type":"exact"},{"name":"disorder of valine metabolism","type":"related"}],"termid":"MONDO:0009371","xrefs":{"Monarch":{"xref_id":"0009371"}}}


id: GO:0140993
data:
  {"annotated_genes":["SJAG_02990","SJAG_00943","SJAG_03635","SJAG_03041","SJAG_03900","SJAG_03286","SJAG_00676","SJAG_01193","SJAG_02659","SJAG_00341","SJAG_03720","SJAG_03997","SJAG_03487","SJAG_01204","SJAG_03630","SJAG_03548","SJAG_02773","SJAG_02401","SJAG_00596","SJAG_00364","SJAG_01082","SJAG_02319","SJAG_03006","SJAG_04574","SJAG_00678","SJAG_02873","SJAG_03537","SJAG_02165","SJAG_03664","SJAG_01146","SJAG_02756","SJAG_02350","SJAG_01837","SJAG_00769"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004402"},{"annotations":[77238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008469"},{"annotations":[75770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043998"},{"annotations":[118096,108456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140995"},{"annotations":[112046,75030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990259"},{"annotations":[116361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072371"},{"annotations":[120726,118071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140850"},{"annotations":[92569,93226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036408"},{"annotations":[96163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140851"},{"annotations":[93227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043993"},{"annotations":[72165,89201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051864"},{"annotations":[97299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140954"},{"annotations":[80343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046975"},{"annotations":[65322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140955"},{"annotations":[68282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140680"},{"annotations":[58335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062122"},{"annotations":[100780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044016"},{"annotations":[80342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042800"},{"annotations":[59050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140999"},{"annotations":[76691,71862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034647"},{"annotations":[74321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032931"},{"annotations":[93228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043992"},{"annotations":[72162,119620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032454"},{"annotations":[112342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140948"},{"annotations":[63751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140949"},{"annotations":[61307,95896],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140683"},{"annotations":[112344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140947"},{"annotations":[118545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035175"},{"annotations":[79983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072354"},{"annotations":[75772,100781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010485"},{"annotations":[90244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043997"},{"annotations":[118882],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140943"},{"annotations":[90245],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043995"},{"annotations":[90246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043996"},{"annotations":[72683,115381,78246,78107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042054"}]},"cv_name":"molecular_function","definition":"A catalytic activity that acts on a histone protein. 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id: GO:1900838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fumigaclavine C biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ergot alkaloid biosynthetic process","termid":"GO:1900823"},{"relation_name":"is_a","term_name":"regulation of fumigaclavine C biosynthetic process","termid":"GO:1900837"},{"relation_name":"negatively_regulates","term_name":"fumigaclavine C biosynthetic process","termid":"GO:1900809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of fumigaclavine C biosynthetic process","synonyms":[{"name":"inhibition of fumigaclavine C biosynthetic process","type":"narrow"}],"termid":"GO:1900838"}


id: GO:1900644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of chanoclavine-I biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of chanoclavine-I biosynthetic process (obsolete GO:1900644)","synonyms":[{"name":"down regulation of chanoclavine-I anabolism","type":"exact"},{"name":"down regulation of chanoclavine-I biosynthesis","type":"exact"},{"name":"down regulation of chanoclavine-I biosynthetic process","type":"exact"},{"name":"down regulation of chanoclavine-I formation","type":"exact"},{"name":"down regulation of chanoclavine-I synthesis","type":"exact"},{"name":"down-regulation of chanoclavine-I anabolism","type":"exact"},{"name":"down-regulation of chanoclavine-I biosynthesis","type":"exact"},{"name":"down-regulation of chanoclavine-I biosynthetic process","type":"exact"},{"name":"down-regulation of chanoclavine-I formation","type":"exact"},{"name":"down-regulation of chanoclavine-I synthesis","type":"exact"},{"name":"downregulation of chanoclavine-I anabolism","type":"exact"},{"name":"downregulation of chanoclavine-I biosynthesis","type":"exact"},{"name":"downregulation of chanoclavine-I biosynthetic process","type":"exact"},{"name":"downregulation of chanoclavine-I formation","type":"exact"},{"name":"downregulation of chanoclavine-I synthesis","type":"exact"},{"name":"inhibition of chanoclavine-I anabolism","type":"exact"},{"name":"inhibition of chanoclavine-I biosynthesis","type":"exact"},{"name":"inhibition of chanoclavine-I biosynthetic process","type":"narrow"},{"name":"inhibition of chanoclavine-I formation","type":"exact"},{"name":"inhibition of chanoclavine-I synthesis","type":"exact"},{"name":"negative regulation of chanoclavine-I anabolism","type":"exact"},{"name":"negative regulation of chanoclavine-I biosynthesis","type":"exact"},{"name":"negative regulation of chanoclavine-I formation","type":"exact"},{"name":"negative regulation of chanoclavine-I synthesis","type":"exact"}],"termid":"GO:1900644"}


id: GO:0005307
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: choline(out) + Na+(out) = choline(in) + Na+(in).","definition_xrefs":["TC:2.A.22.3.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choline transmembrane transporter activity","termid":"GO:0015220"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"choline:sodium symporter activity","secondary_identifiers":["RHEA:76443"],"synonyms":[{"name":"sodium/choline symporter activity","type":"exact"}],"termid":"GO:0005307"}


id: GO:0008870
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + a beta-D-galactoside = CoA + a 6-acetyl-beta-D-galactoside.","definition_xrefs":["EC:2.3.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"galactoside O-acetyltransferase activity","secondary_identifiers":["RHEA:15713","MetaCyc:GALACTOACETYLTRAN-RXN"],"synonyms":[{"name":"acetyl-CoA:beta-D-galactoside 6-acetyltransferase activity","type":"related"},{"name":"galactoside acetyltransferase activity","type":"related"},{"name":"thiogalactoside acetyltransferase activity","type":"related"},{"name":"thiogalactoside transacetylase activity","type":"related"}],"termid":"GO:0008870"}


id: PBO:0082493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic epsilon subunit of the translation initiation factor eIF2B; eIF2B is the guanine-nucleotide exchange factor for eIF2; activity subsequently regulated by phosphorylated eIF2; first identified as a negative regulator of GCN4 expression; mutations in human ortholog cause fatal brain disease childhood ataxia with central nervous system hypomyelination (CACH); forms cytoplasmic foci upon DNA replication stress","termid":"PBO:0082493"}


id: MONDO:0008620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is an isolated upper limb mesomelic dysplasia. It has been described in four patients from two unrelated families (a man and his daughter, and a Lebanese man and his son). Patients present with ulnar hypoplasia with severe radial bowing, but normal stature. The mode of transmission is likely to be autosomal dominant with variable expressivity.","definition_xrefs":["Orphanet:2497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesomelic dysplasia","termid":"MONDO:0023599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"upper limb mesomelic dysplasia","secondary_identifiers":["GARD:2408","icd11.foundation:2013121778","MEDGEN:1811806","MESH:C538069","UMLS:C5574958","OMIM:191440"],"synonyms":[{"name":"Fryns Hofkens Fabry syndrome","type":"related"},{"name":"Fryns-Hofkens-Fabry syndrome","type":"exact"},{"name":"ulna hypoplasia","type":"related"},{"name":"ulnar hypoplasia","type":"related"},{"name":"upper limb mesomelic dysplasia","type":"exact"}],"termid":"MONDO:0008620","xrefs":{"Monarch":{"xref_id":"0008620"}}}


id: MONDO:0016666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unexplained long-lasting fever/inflammatory syndrome","secondary_identifiers":["GARD:20699","MEDGEN:1842329","UMLS:C5679630","Orphanet:251332"],"termid":"MONDO:0016666","xrefs":{"Monarch":{"xref_id":"0016666"}}}


id: MONDO:0002930
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sarcoma involving a kidney.","definition_xrefs":["MONDO:patterns/sarcoma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney cancer","termid":"MONDO:0002367"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"kidney sarcoma","secondary_identifiers":["MEDGEN:87548","ICD9:189.0","UMLS:C0346251","DOID:4242","NCIT:C4525","SCTID:254918001"],"synonyms":[{"name":"kidney sarcoma","type":"exact"},{"name":"renal sarcoma","type":"exact"},{"name":"sarcoma of kidney","type":"exact"},{"name":"sarcoma of the kidney","type":"exact"}],"termid":"MONDO:0002930","xrefs":{"Monarch":{"xref_id":"0002930"}}}


id: PBO:0000153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C2H2 type","termid":"PBO:0000153"}


id: GO:1903852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cristae formation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:19279012","GOC:PARL","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"regulation of cristae formation","termid":"GO:1903850"},{"relation_name":"positively_regulates","term_name":"cristae formation","termid":"GO:0042407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0007005","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cristae formation","synonyms":[{"name":"activation of cristae formation","type":"narrow"},{"name":"up regulation of cristae formation","type":"exact"},{"name":"up-regulation of cristae formation","type":"exact"},{"name":"upregulation of cristae formation","type":"exact"}],"termid":"GO:1903852"}


id: PBO:0057998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3922","termid":"PBO:0057998"}


id: MONDO:0004277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A common sexually transmitted bacterial infection caused by Neisseria gonorrhoeae. It is transmitted through vaginal, oral, or anal intercourse. Infected individuals may be asymptomatic. Symptoms in males include burning sensation during urination, discharge from the penis, and painful swelling of the testes. Symptoms in females include painful urination, vaginal discharge, and vaginal bleeding between periods. If untreated, the infection may lead to pelvic inflammatory disease.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"bacterial sexually transmitted disease","termid":"MONDO:0005323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gonorrhea","secondary_identifiers":["ICD9:098.32","DOID:7551","MEDGEN:9077","SCTID:15628003","ICD9:098","ICD9:098.2","MESH:D006069","NCIT:C92950","Orphanet:100642","UMLS:C0018081","ICD9:098.89"],"synonyms":[{"name":"Crosti-gianotti syndrome","type":"related"},{"name":"GC","type":"exact"},{"name":"Gianotti Crosti syndrome","type":"related"},{"name":"Neisseria gonorrhoeae infection","type":"exact"},{"name":"PAC","type":"related"},{"name":"PAS","type":"related"},{"name":"acrodermatitis, infantile lichenoid","type":"related"},{"name":"acrodermatitis, papular infantile","type":"related"},{"name":"chronic gonococcal infectious disease of lower genitourinary tract","type":"exact"},{"name":"chronic gonococcal infectious disease of upper genitourinary tract","type":"exact"},{"name":"infections, Neisseria gonorrhoeae","type":"related"},{"name":"papular acrodermatitis of childhood","type":"related"}],"termid":"MONDO:0004277","xrefs":{"Monarch":{"xref_id":"0004277"}}}


id: GO:1904535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of telomeric loop disassembly.","definition_xrefs":["GOC:BHF_telomere","PMID:22579284","GO_REF:0000058","GOC:BHF","GOC:TermGenie","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of telomere maintenance","termid":"GO:0032206"},{"relation_name":"is_a","term_name":"regulation of telomeric loop disassembly","termid":"GO:1904533"},{"relation_name":"positively_regulates","term_name":"telomeric loop disassembly","termid":"GO:0090657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0032200"],"is_obsolete":false,"name":"positive regulation of telomeric loop disassembly","synonyms":[{"name":"activation of T loop disassembly","type":"narrow"},{"name":"activation of telomeric loop disassembly","type":"narrow"},{"name":"positive regulation of T loop disassembly","type":"exact"},{"name":"up regulation of T loop disassembly","type":"exact"},{"name":"up regulation of telomeric loop disassembly","type":"exact"},{"name":"up-regulation of T loop disassembly","type":"exact"},{"name":"up-regulation of telomeric loop disassembly","type":"exact"},{"name":"upregulation of T loop disassembly","type":"exact"},{"name":"upregulation of telomeric loop disassembly","type":"exact"}],"termid":"GO:1904535"}


id: PBO:0070961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 16","termid":"PBO:0070961"}


id: PR:Q10205
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exosome complex component RRP43 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03662","PANTHER:PTHR11097:SF9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome complex component rrp43 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D1.03c","secondary_identifiers":["UniProtKB:Q10205"],"synonyms":[{"name":"Spom972h-EXOSC8","type":"exact"},{"name":"ribosomal RNA-processing protein 43 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10205"}


id: PBO:0048711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin 3","termid":"PBO:0048711"}


id: PBO:0079046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 2-1","termid":"PBO:0079046"}


id: PR:O13956
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-rRNA-processing protein TSR1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein tsr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.15","secondary_identifiers":["UniProtKB:O13956"],"synonyms":[{"name":"Spom972h-TSR1","type":"exact"}],"termid":"PR:O13956"}


id: PBO:0061675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 62 C-terminal like","termid":"PBO:0061675"}


id: FYPO:0002262
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that is elongated, and undergoes two or more rounds of cell division and then dies.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, abnormal morphology","termid":"FYPO:0002148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, elongated cell","synonyms":[{"name":"inviable following spore germination, multiple cell divisions, elongated cell","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, elongated cell","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, elongated cell","type":"exact"}],"termid":"FYPO:0002262"}


id: PBO:0085840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and the nucleus; relocalizes from nucleus to cytoplasm upon DNA replication stress; YOR342C has a paralog, YAL037W, that arose from the whole genome duplication","termid":"PBO:0085840"}


id: PBO:0003121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin peroxidase (predicted)","termid":"PBO:0003121"}


id: FYPO:0005393
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which vegetative cell population growth is slower than normal, and the population growth rate decreases over successive generations.","definition_xrefs":["PomBase:mah","PMID:12196391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002058","FYPO:0000139","FYPO:0002057","FYPO:0002060","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"progressively decreasing vegetative cell population growth rate","synonyms":[{"name":"progressively decreasing cell population growth rate during vegetative growth","type":"exact"},{"name":"progressively decreasing cell population proliferation","type":"related"},{"name":"progressively decreasing cell proliferation","type":"related"},{"name":"progressively reduced cell proliferation","type":"related"},{"name":"progressively reduced vegetative cell population growth rate","type":"exact"}],"termid":"FYPO:0005393"}


id: PBO:0116679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 10","termid":"PBO:0116679"}


id: GO:0102140
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + [heparan sulfate]-N-acetyl-alpha-D-glucosamine = acetate + H+ + [heparan sulfate]-alpha-D-glucosamine.","definition_xrefs":["RHEA:70587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0019213","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"heparan sulfate N-deacetylase activity","termid":"GO:0102140"}


id: FYPO:0003712
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more Skb1-containing lateral cortical nodes than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"lateral cortical nodes present in increased numbers","synonyms":[{"name":"Skb1-containing cortical nodes present in increased numbers","type":"exact"},{"name":"additional lateral cortical nodes present during vegetative growth","type":"exact"},{"name":"extra lateral cortical nodes during vegetative growth","type":"exact"},{"name":"lateral cortical nodes present in greater numbers","type":"exact"},{"name":"lateral cortical nodes present in increased numbers during mitotic cell cycle","type":"related"},{"name":"lateral cortical nodes present in increased numbers during vegetative growth","type":"exact"}],"termid":"FYPO:0003712"}


id: PBO:0039568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD62P1-PARP4P3 readthrough, transcribed pseudogene","termid":"PBO:0039568"}


id: MONDO:0002257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fixation and immobility of a joint.","definition_xrefs":["MESH:D000844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arthropathy","termid":"MONDO:0006816"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankylosis","secondary_identifiers":["ICD9:718.5","ICD9:718.50","UMLS:C0003090","HP:0031013","SCTID:111227009","MEDGEN:8101","DOID:227"],"synonyms":[{"name":"ankylosis","type":"exact"},{"name":"ankylosis (disease)","type":"exact"}],"termid":"MONDO:0002257","xrefs":{"Monarch":{"xref_id":"0002257"}}}


id: GO:1904439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of iron ions import across plasma membrane.","definition_xrefs":["GOC:kom","GOC:TermGenie","PMID:18353247","GOC:BHF","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of iron ion transmembrane transport","termid":"GO:0034760"},{"relation_name":"is_a","term_name":"regulation of iron ion import across plasma membrane","termid":"GO:1904438"},{"relation_name":"negatively_regulates","term_name":"iron ion import across plasma membrane","termid":"GO:0098711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0098771"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0098771"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0098771","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of iron ion import across plasma membrane","secondary_identifiers":["GO:1903990"],"synonyms":[{"name":"down regulation of ferrous ion import into cell","type":"related"},{"name":"down regulation of ferrous iron import across plasma membrane","type":"related"},{"name":"down-regulation of ferrous ion import into cell","type":"related"},{"name":"down-regulation of ferrous iron import across plasma membrane","type":"related"},{"name":"downregulation of ferrous ion import into cell","type":"related"},{"name":"downregulation of ferrous iron import across plasma membrane","type":"related"},{"name":"inhibition of ferrous ion import into cell","type":"narrow"},{"name":"inhibition of ferrous iron import across plasma membrane","type":"narrow"},{"name":"negative regulation of ferrous ion import into cell","type":"related"},{"name":"negative regulation of ferrous iron import across plasma membrane","type":"related"},{"name":"negative regulation of ferrous iron import into cell","type":"related"}],"termid":"GO:1904439"}


id: PBO:0017745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8 activating enzyme E1-type Uba5 (predicted)","termid":"PBO:0017745"}


id: CHEBI:46345
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A nucleobase analogue that is uracil in which the hydrogen at position 5 is replaced by fluorine. It is an antineoplastic agent which acts as an antimetabolite - following conversion to the active deoxynucleotide, it inhibits DNA synthesis (by blocking the conversion of deoxyuridylic acid to thymidylic acid by the cellular enzyme thymidylate synthetase) and so slows tumour growth.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-fluorouracil","termid":"CHEBI:46345"}


id: PBO:0081163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger translocation associated","termid":"PBO:0081163"}


id: MONDO:0003264
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A basal cell carcinoma which displays squamous differentiation. The neoplastic cells have more abundant cytoplasm with more marked keratinization than typical basal cell carcinomas. It usually has a more aggressive clinical course compared to typical basal cell carcinoma, and it may produce regional or widespread metastases.","definition_xrefs":["NCIT:C2922"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin basal cell carcinoma","termid":"MONDO:0005341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"basosquamous carcinoma","secondary_identifiers":["MESH:D002281","ICDO:8094/3","MONDO:0006413","UMLS:C0007118","EFO:1000529","SCTID:254702000","DOID:5063","MEDGEN:2841"],"synonyms":[{"name":"Basisquamous cell carcinoma","type":"exact"},{"name":"basosquamous carcinoma","type":"exact"},{"name":"basosquamous cell carcinoma","type":"exact"},{"name":"basosquamous tumor, malignant","type":"exact"},{"name":"metatypical carcinoma","type":"exact"},{"name":"metatypical carcinoma (morphologic abnormality)","type":"exact"},{"name":"skin basosquamous cell carcinoma","type":"exact"},{"name":"skin mixed basal and squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0003264","xrefs":{"Monarch":{"xref_id":"0003264"}}}


id: PBO:0002195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L36/L42","termid":"PBO:0002195"}


id: PBO:0045182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member B3","termid":"PBO:0045182"}


id: GO:1903110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of single-strand break repair via homologous recombination.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24339919","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA recombination","termid":"GO:0000018"},{"relation_name":"is_a","term_name":"regulation of single strand break repair","termid":"GO:1903516"},{"relation_name":"regulates","term_name":"single-strand break repair via homologous recombination","termid":"GO:1990396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"regulation of single-strand break repair via homologous recombination","termid":"GO:1903110"}


id: PBO:0066179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 4B","termid":"PBO:0066179"}


id: MONDO:0021289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the caecum.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colon carcinoma in situ","termid":"MONDO:0004663"},{"relation_name":"is_a","term_name":"cecum carcinoma","termid":"MONDO:0006029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"carcinoma in situ of cecum","secondary_identifiers":["UMLS:C0347126","NCIT:C4594","MEDGEN:83854","SCTID:92559007"],"synonyms":[{"name":"caecum carcinoma in situ","type":"exact"},{"name":"caecum in situ carcinoma","type":"exact"},{"name":"carcinoma in situ of caecum","type":"exact"},{"name":"carcinoma in situ of the cecum","type":"exact"},{"name":"cecum carcinoma in situ","type":"exact"},{"name":"cecum carcinoma in situ aJCC v6","type":"exact"},{"name":"cecum carcinoma in situ aJCC v7","type":"exact"},{"name":"stage 0 caecum carcinoma","type":"exact"},{"name":"stage 0 cecum carcinoma","type":"exact"}],"termid":"MONDO:0021289","xrefs":{"Monarch":{"xref_id":"0021289"}}}


id: PBO:0085579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in 5.8S rRNA processing; Ccr4p-like RNase required for correct 3'-end formation of 5.8S rRNA at site E; similar to Ngl1p; NGL2 has a paralog, NGL3, that arose from the whole genome duplication","termid":"PBO:0085579"}


id: MONDO:0003504
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm with neuroendocrine differentiation that arises from the anal canal. It includes well differentiated neuroendocrine tumors (low and intermediate grade) and poorly differentiated neuroendocrine carcinomas (high grade).","definition_xrefs":["NCIT:C5603"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroendocrine carcinoma","termid":"MONDO:0002120"},{"relation_name":"is_a","term_name":"rectum neuroendocrine neoplasm","termid":"MONDO:0003646"},{"relation_name":"is_a","term_name":"anal canal carcinoma","termid":"MONDO:0007108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"anal canal neuroendocrine neoplasm","secondary_identifiers":["MEDGEN:231063","UMLS:C1332273","DOID:5545","SCTID:717917007"],"synonyms":[{"name":"anal canal NET","type":"related"},{"name":"anal canal neuroendocrine neoplasm","type":"exact"},{"name":"anal canal neuroendocrine tumor","type":"related"},{"name":"anal canal neuroendocrine tumor, well differentiated, low or intermediate grade","type":"related"},{"name":"anal canal neuroendocrine tumour","type":"related"},{"name":"anal neuroendocrine neoplasm","type":"exact"},{"name":"anal neuroendocrine tumor","type":"related"},{"name":"anal neuroendocrine tumour","type":"related"},{"name":"anus neuroendocrine neoplasm","type":"exact"},{"name":"anus neuroendocrine tumor","type":"related"},{"name":"anus neuroendocrine tumour","type":"related"},{"name":"neuroendocrine neoplasm of anal canal","type":"exact"},{"name":"neuroendocrine neoplasm of anus","type":"exact"},{"name":"neuroendocrine neoplasm of the anus","type":"exact"},{"name":"neuroendocrine tumor of anus","type":"related"},{"name":"neuroendocrine tumour of anus","type":"related"}],"termid":"MONDO:0003504","xrefs":{"Monarch":{"xref_id":"0003504"}}}


id: PBO:0068258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 45S pre-ribosomal 5","termid":"PBO:0068258"}


id: PBO:0070307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 13","termid":"PBO:0070307"}


id: PBO:0073583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shieldin complex subunit 1","termid":"PBO:0073583"}


id: PBO:0053307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lin-28 homolog B","termid":"PBO:0053307"}


id: GO:0008424
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(4)-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-N-acetyl-beta-D-glucosaminyl}-L-asparagine + GDP-L-fucose = N(4)-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-[alpha-L-fucosyl-(1->6)]-N-acetyl-beta-D-glucosaminyl}asparagine + GDP + H+.","definition_xrefs":["EC:2.4.1.68","RHEA:12985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-(1->6)-fucosyltransferase activity","termid":"GO:0046921"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"glycoprotein 6-alpha-L-fucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.68-RXN","Reactome:R-HSA-1028788","KEGG_REACTION:R05988","Reactome:R-HSA-9696980"],"synonyms":[{"name":"FucT","type":"related"},{"name":"GDP-L-Fuc:N-acetyl-beta-D-glucosaminide alpha(1,6)fucosyltransferase activity","type":"related"},{"name":"GDP-L-Fuc:N-acetyl-beta-D-glucosaminide alpha(1->6)fucosyltransferase activity","type":"related"},{"name":"GDP-L-Fuc:N-acetyl-beta-D-glucosaminide alpha-(1,6)fucosyltransferase activity","type":"related"},{"name":"GDP-L-Fuc:N-acetyl-beta-D-glucosaminide alpha-(1->6)fucosyltransferase activity","type":"related"},{"name":"GDP-L-fucose--glycoprotein fucosyltransferase activity","type":"related"},{"name":"GDP-fucose--glycoprotein fucosyltransferase activity","type":"related"},{"name":"GDPfucose-glycoprotein fucosyltransferase activity","type":"related"},{"name":"glycoprotein fucosyltransferase activity","type":"broad"},{"name":"guanosine diphosphofucose--glycoprotein fucosyltransferase activity","type":"related"}],"termid":"GO:0008424"}


id: GO:0140876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of andrastin A, a meroterpenoid that exhibits inhibitory activity against ras farnesyltransferase, suggesting that it could have promising antitumor activity.","definition_xrefs":["DOI:10.1016/j.tet.2013.07.029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"aldehyde biosynthetic process","termid":"GO:0046184"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"acetate ester biosynthetic process","termid":"GO:1900620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"andrastin A biosynthetic process","synonyms":[{"name":"andrastin A anabolism","type":"exact"},{"name":"andrastin A biosynthesis","type":"exact"},{"name":"andrastin A formation","type":"exact"},{"name":"andrastin A synthesis","type":"exact"}],"termid":"GO:0140876"}


id: GO:0005576
data:
  {"annotated_genes":["SJAG_05001","SJAG_02093","SJAG_03824","SJAG_04301","SJAG_00781","SJAG_02091","SJAG_03444","SJAG_02959","SJAG_04067","SJAG_02131","SJAG_00975","SJAG_00181","SJAG_00620","SJAG_02582","SJAG_01835","SJAG_00667","SJAG_04327","SJAG_04864","SJAG_02949","SJAG_01970","SJAG_02580","SJAG_04073","SJAG_01171","SJAG_02478","SJAG_02192","SJAG_03295","SJAG_00981"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[61318,72328,74383,76842,78803,79653,79913,89252,90015,90503,90905,92356,93703,101965,102164,102630,103414,103415,104270,109608,115191,115192,115562,115563,117446,117486,117980],"is_not":false,"summary":null,"term":"GO:0005576"}]},"cv_name":"cellular_component","definition":"The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00181":null,"SJAG_00620":null,"SJAG_00667":null,"SJAG_00781":null,"SJAG_00975":null,"SJAG_00981":null,"SJAG_01171":null,"SJAG_01835":null,"SJAG_01970":null,"SJAG_02091":null,"SJAG_02093":null,"SJAG_02131":null,"SJAG_02192":null,"SJAG_02478":null,"SJAG_02580":null,"SJAG_02582":null,"SJAG_02949":null,"SJAG_02959":null,"SJAG_03295":null,"SJAG_03444":null,"SJAG_03824":null,"SJAG_04067":null,"SJAG_04073":null,"SJAG_04301":null,"SJAG_04327":null,"SJAG_04864":null,"SJAG_05001":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extracellular region","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Extracellular"],"synonyms":[{"name":"extracellular","type":"exact"}],"termid":"GO:0005576","terms_by_termid":{"GO:0005576":null}}


id: PBO:0059533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Glu (GAA/G)","termid":"PBO:0059533"}


id: PBO:0077891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53RK binding protein","termid":"PBO:0077891"}


id: FYPO:0006780
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to Rbin-1. Cells stop growing (and may die) at a concentration of Rbin-1 that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0002683","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to Rbin-1","synonyms":[{"name":"hypersensitive to Rbin-1","type":"exact"},{"name":"sensitive to Rbin-1 during mitotic cell cycle","type":"related"},{"name":"sensitive to Rbin-1 during vegetative growth","type":"exact"},{"name":"sensitive to ribozinoindole-1","type":"exact"}],"termid":"FYPO:0006780"}


id: MONDO:0017488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ulnar hemimelia","termid":"MONDO:0019670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"ulnar hemimelia, bilateral","secondary_identifiers":["Orphanet:295073","icd11.foundation:837973744"],"synonyms":[{"name":"ulnar longitudinal meromelia, bilateral","type":"exact"}],"termid":"MONDO:0017488","xrefs":{"Monarch":{"xref_id":"0017488"}}}


id: MONDO:0019894
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-distal monosomy 7p (obsolete MONDO:0019894)","secondary_identifiers":["Orphanet:96136"],"synonyms":[{"name":"non-distal deletion 7p","type":"exact"},{"name":"non-distal monosomy type 7p","type":"exact"},{"name":"non-telomeric monosomy 7p","type":"exact"}],"termid":"MONDO:0019894","xrefs":{"Monarch":{"xref_id":"0019894"}}}


id: GO:0006892
data:
  {"annotated_genes":["SJAG_03938","SJAG_04358","SJAG_00916","SJAG_03848","SJAG_03963","SJAG_02587","SJAG_03072","SJAG_00858","SJAG_01335","SJAG_04023","SJAG_00430","SJAG_00330","SJAG_00108","SJAG_02811","SJAG_03726","SJAG_01114","SJAG_04966","SJAG_02240","SJAG_00826","SJAG_01645","SJAG_03970","SJAG_02443","SJAG_03142","SJAG_01945","SJAG_04044","SJAG_03864","SJAG_02753","SJAG_00144","SJAG_01809","SJAG_01324","SJAG_02282","SJAG_02453","SJAG_01598","SJAG_02320","SJAG_03347","SJAG_04902","SJAG_03137","SJAG_04931","SJAG_01516","SJAG_03838","SJAG_04609","SJAG_03754","SJAG_03005","SJAG_03746","SJAG_04338","SJAG_01488","SJAG_00380","SJAG_01027","SJAG_02177","SJAG_04112","SJAG_03756","SJAG_00669","SJAG_02912"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75124,76519,81219,96045,112523],"is_not":false,"summary":null,"term":"GO:0006892"},{"annotations":[118831,120308,81523,62281,79484,79458,102072,102130,101731,90966,75264,102936,114861,78604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006895"},{"annotations":[108875,96966,71926,79334,110637,111426,114862,108246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043001"},{"annotations":[94084,74340,108124,73663,101577,57675,102668,77755,109222,72430,79126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006893"},{"annotations":[98955,110638,75265,77858,79910,77912,81380,97949,79370,101733,119413,98690,113352,95997,79459,101327,71697,92388,79485,112111,103272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006896"},{"annotations":[89903],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0042997"}]},"cv_name":"biological_process","definition":"The directed movement of substances from the Golgi to other parts of the cell, including organelles and the plasma membrane, mediated by small transport vesicles.","definition_xrefs":["GOC:mah","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":53,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_00144":null,"SJAG_00330":null,"SJAG_00380":null,"SJAG_00430":null,"SJAG_00669":null,"SJAG_00826":null,"SJAG_00858":null,"SJAG_00916":null,"SJAG_01027":null,"SJAG_01114":null,"SJAG_01324":null,"SJAG_01335":null,"SJAG_01488":null,"SJAG_01516":null,"SJAG_01598":null,"SJAG_01645":null,"SJAG_01809":null,"SJAG_01945":null,"SJAG_02177":null,"SJAG_02240":null,"SJAG_02282":null,"SJAG_02320":null,"SJAG_02443":null,"SJAG_02453":null,"SJAG_02587":null,"SJAG_02753":null,"SJAG_02811":null,"SJAG_02912":null,"SJAG_03005":null,"SJAG_03072":null,"SJAG_03137":null,"SJAG_03142":null,"SJAG_03347":null,"SJAG_03726":null,"SJAG_03746":null,"SJAG_03754":null,"SJAG_03756":null,"SJAG_03838":null,"SJAG_03848":null,"SJAG_03864":null,"SJAG_03938":null,"SJAG_03963":null,"SJAG_03970":null,"SJAG_04023":null,"SJAG_04044":null,"SJAG_04112":null,"SJAG_04338":null,"SJAG_04358":null,"SJAG_04609":null,"SJAG_04902":null,"SJAG_04931":null,"SJAG_04966":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"post-Golgi vesicle-mediated transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-199992"],"synonyms":[{"name":"post-Golgi transport","type":"exact"}],"termid":"GO:0006892","terms_by_termid":{"GO:0006892":null,"GO:0006893":null,"GO:0006895":null,"GO:0006896":null,"GO:0042997":null,"GO:0043001":null}}


id: MONDO:0000851
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete achondrogenesis (obsolete MONDO:0000851)","termid":"MONDO:0000851","xrefs":{"Monarch":{"xref_id":"0000851"}}}


id: GO:0015050
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses methane monooxygenase activity; dimeric and trimeric complexes have been characterized.","definition_xrefs":["GOC:mah","PMID:15544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"methane monooxygenase complex","termid":"GO:0015050"}


id: MOD:01942
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to D-aspartic acid.","definition_xrefs":["RESID:AA0190","ChEBI:48094","PubMed:9384562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-aspartic acid","synonyms":[{"name":"(2R)-2-aminobutanedioic acid","type":"exact"},{"name":"2-azanylbutanedioic acid","type":"exact"},{"name":"D-aspartic acid","type":"exact"},{"name":"aminosuccinic acid","type":"exact"}],"termid":"MOD:01942"}


id: PBO:0077145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidine kinase 2","termid":"PBO:0077145"}


id: PBO:0085280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal membrane E3 ubiquitin ligase; required for for Ubc4p-dependent Pex5p ubiquitination and peroxisomal matrix protein import; contains zinc-binding RING domain; mutations in human homolog cause various peroxisomal disorders","termid":"PBO:0085280"}


id: GO:1905944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of formation of growth cone in injured axon.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:19737525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sprouting of injured axon","termid":"GO:0048687"},{"relation_name":"is_a","term_name":"regulation of formation of growth cone in injured axon","termid":"GO:1905942"},{"relation_name":"positively_regulates","term_name":"formation of growth cone in injured axon","termid":"GO:0048689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of formation of growth cone in injured axon","synonyms":[{"name":"activation of formation of growth cone in injured axon","type":"narrow"},{"name":"up regulation of formation of growth cone in injured axon","type":"exact"},{"name":"up-regulation of formation of growth cone in injured axon","type":"exact"},{"name":"upregulation of formation of growth cone in injured axon","type":"exact"}],"termid":"GO:1905944"}


id: PBO:0061700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUS1 dehydrodolichyl diphosphate synthase subunit","termid":"PBO:0061700"}


id: GO:0009051
data:
  {"annotated_genes":["SJAG_03852","SJAG_02297","SJAG_01824","SJAG_00633","SJAG_02696"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74800,82111,98703,98793,99998],"is_not":false,"summary":null,"term":"GO:0009051"}]},"cv_name":"biological_process","definition":"The branch of the pentose-phosphate shunt which involves the oxidation of glucose 6-P and produces ribulose 5-P, reduced NADP+ and carbon dioxide (CO2).","definition_xrefs":["ISBN:0198506732","MetaCyc:OXIDATIVEPENT-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NADPH regeneration","termid":"GO:0006740"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"},{"relation_name":"part_of","term_name":"pentose-phosphate shunt","termid":"GO:0006098"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00633":null,"SJAG_01824":null,"SJAG_02297":null,"SJAG_02696":null,"SJAG_03852":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"part_of","termid":"GO:0044281"},{"rel_name":"part_of","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"part_of","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0055086","GO:0006091","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pentose-phosphate shunt, oxidative branch","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"oxidative branch, pentose pathway","type":"exact"},{"name":"oxidative pentose phosphate pathway","type":"exact"},{"name":"pentose phosphate pathway, oxidative branch","type":"exact"},{"name":"pentose phosphate shunt, oxidative branch","type":"exact"},{"name":"pentose-phosphate pathway, oxidative branch","type":"exact"}],"termid":"GO:0009051","terms_by_termid":{"GO:0009051":null}}


id: GO:0030437
data:
  {"annotated_genes":["SJAG_03557","SJAG_04238","SJAG_03250","SJAG_03536","SJAG_04901","SJAG_01769","SJAG_04010","SJAG_01483","SJAG_02248","SJAG_00663","SJAG_03057","SJAG_02169","SJAG_02529","SJAG_04868","SJAG_03090","SJAG_00826","SJAG_03915","SJAG_00405","SJAG_04922","SJAG_00974","SJAG_00486","SJAG_04781","SJAG_00993","SJAG_05309","SJAG_00971","SJAG_04236","SJAG_03688","SJAG_02241","SJAG_01321","SJAG_04140","SJAG_01662","SJAG_00114","SJAG_04470","SJAG_03483","SJAG_01531","SJAG_02712","SJAG_03587","SJAG_04271","SJAG_04853","SJAG_04615","SJAG_04080","SJAG_04859","SJAG_04275","SJAG_03746","SJAG_04483","SJAG_02320","SJAG_04184","SJAG_00821","SJAG_03013"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98333,98748,102544,106952,113363,114567],"is_not":false,"summary":null,"term":"GO:0030437"},{"annotations":[96277],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[93587,92060,90515,90026],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[74739],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[105990,119642,119650,115939,110913],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070591"},{"annotations":[93314,106806,74741],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031321"},{"annotations":[109220,120897,97188,115787,101722,99365,107116,100642,99402,93103,111961,120413,103528,120714],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032120"},{"annotations":[99366,101651,94104,108665,98682,109551,105948,104740,101652,115788],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031322"},{"annotations":[113051],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0075297"},{"annotations":[104108],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0075296"},{"annotations":[92539],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[94000],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0034307"},{"annotations":[101654,117830,101939,96318,101653,107843],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"The process in which cells that are products of meiosis acquire the specialized features of ascospores. Ascospores are generally found in clusters of four or eight spores within a single mother cell, the ascus, and are characteristic of the ascomycete fungi (phylum Ascomycota).","definition_xrefs":["GOC:di","GOC:mcc","PMID:16339736","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process in single-celled organism","termid":"GO:0022413"},{"relation_name":"is_a","term_name":"sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043935"},{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":49,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00405":null,"SJAG_00486":null,"SJAG_00663":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_00974":null,"SJAG_00993":null,"SJAG_01321":null,"SJAG_01483":null,"SJAG_01531":null,"SJAG_01662":null,"SJAG_01769":null,"SJAG_02169":null,"SJAG_02241":null,"SJAG_02248":null,"SJAG_02320":null,"SJAG_02529":null,"SJAG_02712":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03090":null,"SJAG_03250":null,"SJAG_03483":null,"SJAG_03536":null,"SJAG_03557":null,"SJAG_03587":null,"SJAG_03688":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04080":null,"SJAG_04140":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04271":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04483":null,"SJAG_04615":null,"SJAG_04781":null,"SJAG_04853":null,"SJAG_04859":null,"SJAG_04868":null,"SJAG_04901":null,"SJAG_04922":null,"SJAG_05309":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"ascospore formation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0007151"],"synonyms":[{"name":"ascospore biosynthesis","type":"exact"},{"name":"spore formation","type":"broad"},{"name":"sporulation","type":"broad"}],"termid":"GO:0030437","terms_by_termid":{"GO:0030437":null,"GO:0030476":null,"GO:0031321":null,"GO:0031322":null,"GO:0032120":null,"GO:0034307":null,"GO:0034412":null,"GO:0034413":null,"GO:0070583":null,"GO:0070591":null,"GO:0075296":null,"GO:0075297":null,"GO:1903024":null}}


id: GO:0106251
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction N4-acetylcytidine +H2O = cytidine + acetate.","definition_xrefs":["GOC:imk","RHEA:62932","PMID:31964920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"N4-acetylcytidine amidohydrolase activity","termid":"GO:0106251"}


id: GO:0097165
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dense aggregation in the nucleus composed of proteins and RNAs that appear when the cell is under stress.","definition_xrefs":["PMID:10359787","PMID:12865437","GOC:ans"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear ribonucleoprotein granule","termid":"GO:0140168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005654","GO:0005575"],"is_obsolete":false,"name":"nuclear stress granule","termid":"GO:0097165"}


id: GO:0035478
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a chylomicron, a large lipoprotein particle (diameter 75-1200 nm) composed of a central core of triglycerides and cholesterol surrounded by a protein-phospholipid coating. The proteins include one molecule of apolipoprotein B-48 and may include a variety of apolipoproteins, including APOAs, APOCs and APOE.","definition_xrefs":["GOC:BHF","PMID:17403372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein particle binding","termid":"GO:0071813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"chylomicron binding","termid":"GO:0035478"}


id: MONDO:0023558
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"muscle tissue disorder","termid":"MONDO:0003939"},{"relation_name":"is_a","term_name":"congenital hypothyroidism","termid":"MONDO:0018612"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kocher-debre-Semelaigne syndrome","secondary_identifiers":["MESH:C537211","icd11.foundation:109007822"],"synonyms":[{"name":"Kocher debre Semelaigne disease","type":"related"},{"name":"association of muscular pseudohypertrophy and hypothyroidism in children","type":"related"}],"termid":"MONDO:0023558","xrefs":{"Monarch":{"xref_id":"0023558"}}}


id: MONDO:1010127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dermatomyositis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polymyositis, non-human animal","termid":"MONDO:1010203"},{"relation_name":"is_a","term_name":"connective tissue disorder, non-human animal","termid":"MONDO:1011309"},{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermatomyositis, non-human animal","secondary_identifiers":["OMIA:000270"],"termid":"MONDO:1010127","xrefs":{"Monarch":{"xref_id":"1010127"}}}


id: GO:0018481
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: <stereo>cis,trans</stereo>-4-hydroxymuconate semialdehyde + H2O + NAD+ = 2 H+ + maleylacetate + NADH.","definition_xrefs":["RHEA:22420","EC:1.2.1.61"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-hydroxymuconic-semialdehyde dehydrogenase activity","secondary_identifiers":["MetaCyc:1.2.1.61-RXN","UM-BBD_reactionID:r0229","KEGG_REACTION:R05236"],"synonyms":[{"name":"4-hydroxymuconic-semialdehyde:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0018481"}


id: SO:0001122
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of two consecutive residues with dihedral angles: Residue(i): -140 degrees < phi < -20 degrees, -90 degrees < psi < +40 degrees. Residue(i+1): +20 degrees < phi < +140 degrees, -40 degrees < psi < +90 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_nest_motif","termid":"SO:0001120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_nest_right_left_motif","secondary_identifiers":["BS:00225"],"synonyms":[{"name":"nest_right_left","type":"exact"},{"name":"nest_rl","type":"exact"},{"name":"polypeptide nest right left motif","type":"exact"}],"termid":"SO:0001122"}


id: MONDO:0015140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A progressive dementia with reduction of cognitive functions. It presents the same phenotype as sporadic Alzheimer disease (AD) but has an early age of onset, usually before 60 years old.","definition_xrefs":["Orphanet:1020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"familial Alzheimer disease","termid":"MONDO:0100087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0000426","MONDO:0005559"],"is_obsolete":false,"name":"early-onset autosomal dominant Alzheimer disease","secondary_identifiers":["GARD:12798"],"synonyms":[{"name":"EOFAD","type":"exact"},{"name":"early-onset familial autosomal dominant Alzheimer disease","type":"exact"},{"name":"early-onset, autosomal dominant Alzheimer disease","type":"related"}],"termid":"MONDO:0015140","xrefs":{"Monarch":{"xref_id":"0015140"}}}


id: FYPO:0009018
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a higher than normal proportion of cells in the population remains viable after entering stationary phase, when subjected to glucose starvation and when cadmium is present in the medium in a higher proportion than usual.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased viability in stationary phase","termid":"FYPO:0001309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased viability in stationary phase upon glucose starvation in the presence of cadmium","termid":"FYPO:0009018"}


id: PBO:0055644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3083","termid":"PBO:0055644"}


id: GO:0016754
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-malate + 1-O-sinapoyl-beta-D-glucose = D-glucose + sinapoyl (S)-malate.","definition_xrefs":["RHEA:12625","EC:2.3.1.92"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-sinapoyltransferase activity","termid":"GO:0016753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"sinapoylglucose-malate O-sinapoyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03323","MetaCyc:2.3.1.92-RXN"],"synonyms":[{"name":"1-O-sinapoyl-beta-D-glucose:(S)-malate O-sinapoyltransferase activity","type":"related"},{"name":"1-sinapoylglucose-L-malate sinapoyltransferase activity","type":"related"},{"name":"sinapoylglucose:malate sinapoyltransferase activity","type":"exact"}],"termid":"GO:0016754"}


id: PBO:0110070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RQT complex ATP-dependent RNA helicase Rqt2, human ASCC3 ortholog","termid":"PBO:0110070"}


id: MONDO:1010650
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pelger-Huet anomaly that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Pelger-Huet anomaly, non-human animal","termid":"MONDO:1010077"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pelger-Huet anomaly, dog","secondary_identifiers":["OMIA:000783-9615"],"termid":"MONDO:1010650","xrefs":{"Monarch":{"xref_id":"1010650"}}}


id: PBO:0048852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GNRHR2 pseudogene 1","termid":"PBO:0048852"}


id: GO:0000227
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of oxaloacetate from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete oxaloacetate secondary active transmembrane transporter activity (obsolete GO:0000227)","synonyms":[{"name":"oxaloacetate carrier activity","type":"related"}],"termid":"GO:0000227"}


id: PATO:0000176
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000176 metabolic function (obsolete PATO:0000176)","termid":"PATO:0000176"}


id: GO:0102376
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: lupeol + 3 NADPH + 3 O2 + 3 H+ = betulinic acid + 3 NADP + 4 H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete lupeol 28-oxidase activity (obsolete GO:0102376)","termid":"GO:0102376"}


id: PBO:0040572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,4-galactosyltransferase 6","termid":"PBO:0040572"}


id: PBO:0080509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WARS2 antisense RNA 1","termid":"PBO:0080509"}


id: PBO:0080121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VAC14 antisense RNA 1","termid":"PBO:0080121"}


id: PBO:0004999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK regulator, involved in ribosome export (predicted)","termid":"PBO:0004999"}


id: PR:P52890
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P52890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor atf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29B5.01","synonyms":[{"name":"Spom972h-atf1","type":"exact"},{"name":"protein sss1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcription factor mts1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P52890"}


id: PBO:0079340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 24, pseudogene","termid":"PBO:0079340"}


id: PR:000044705
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.3, initiator methionine removed K9-methylated form (Schizosaccharomyces pombe) whose methylation type is trimethylation. Example: UniProtKB:P10651-1, 2-136, Lys-10, MOD:00083.","definition_xrefs":["PRO:DAN","PMID:23849629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hht3/Me(K9)","termid":"PR:000027604"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3, initiator methionine removed K9-trimethylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"Spom-hht3/InitMet-/K9me3","type":"exact"}],"termid":"PR:000044705"}


id: MONDO:0015915
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cerebellar malformation (obsolete MONDO:0015915)","secondary_identifiers":["Orphanet:182061"],"termid":"MONDO:0015915","xrefs":{"Monarch":{"xref_id":"0015915"}}}


id: GO:0031595
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A proteasome found in the nucleus of a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome complex","termid":"GO:0000502"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear lumen","termid":"GO:0031981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"nuclear proteasome complex","termid":"GO:0031595"}


id: PBO:0049921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HFE antisense RNA 1","termid":"PBO:0049921"}


id: GO:0030735
data:
  {"annotated_genes":["SJAG_03087"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106984],"is_not":false,"summary":null,"term":"GO:0030735"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + carnosine = S-adenosyl-L-homocysteine + anserine + H+.","definition_xrefs":["RHEA:14205","EC:2.1.1.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03087":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"carnosine N-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:CARNOSINE-N-METHYLTRANSFERASE-RXN","KEGG_REACTION:R02144","Reactome:R-HSA-8876789"],"synonyms":[{"name":"S-adenosyl-L-methionine:carnosine N-methyltransferase activity","type":"related"}],"termid":"GO:0030735","terms_by_termid":{"GO:0030735":null}}


id: MONDO:0017057
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary thrombocytopenia with normal platelets (obsolete MONDO:0017057)","secondary_identifiers":["Orphanet:268322"],"termid":"MONDO:0017057","xrefs":{"Monarch":{"xref_id":"0017057"}}}


id: PBO:0049949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIF1A antisense RNA 2","termid":"PBO:0049949"}


id: PBO:0090325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lanosterol 14-demethylase (cytochrome P450) Erg11","termid":"PBO:0090325"}


id: PBO:0016101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD synthetase Nad1 (predicted)","termid":"PBO:0016101"}


id: GO:0050596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADPH + O2 + vinorine = H2O + NADP+ + vomilenine.","definition_xrefs":["EC:1.14.14.104","RHEA:17257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"vinorine hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R05877","MetaCyc:1.14.13.75-RXN"],"synonyms":[{"name":"vinorine,NADPH:oxygen oxidoreductase (21alpha-hydroxylating)","type":"related"}],"termid":"GO:0050596"}


id: PBO:0070025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1322, pseudogene","termid":"PBO:0070025"}


id: GO:0021720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the superior olivary nucleus. This process pertains to the initial formation of a structure from unspecified parts. In mice, the superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound.","definition_xrefs":["GOC:jid","GOC:dgh","GO_REF:0000021","ISBN:0838580343","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"pons formation","termid":"GO:0021584"},{"relation_name":"part_of","term_name":"superior olivary nucleus morphogenesis","termid":"GO:0021719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior olivary nucleus formation","termid":"GO:0021720"}


id: PBO:0057600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 937","termid":"PBO:0057600"}


id: PBO:0062834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex non-catalytic subunit","termid":"PBO:0062834"}


id: PBO:0038291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interaction_type","termid":"PBO:0038291"}


id: GO:0031938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that affects the rate, extent or location of chromatin silencing at telomeres.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of chromatin silencing at telomere (obsolete GO:0031938)","synonyms":[{"name":"regulation of heterochromatic silencing at telomere","type":"exact"}],"termid":"GO:0031938"}


id: PBO:0012267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIP/FAR complex striatin subunit, Far8/Csc3","termid":"PBO:0012267"}


id: PBO:0090756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF3074 family protein, implicated in vesicle trafficking or lipid metabolism","termid":"PBO:0090756"}


id: PBO:0045812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 2","termid":"PBO:0045812"}


id: PBO:0065279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich coiled-coil 2C","termid":"PBO:0065279"}


id: GO:0018043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-isoleucine amide by hydrolysis and oxidation of an interior Ile-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0090"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-isoleucine amidation (obsolete GO:0018043)","termid":"GO:0018043"}


id: PBO:0073696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle and kinetochore associated complex subunit 2","termid":"PBO:0073696"}


id: PBO:0075886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1","termid":"PBO:0075886"}


id: RO:0002567
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation that holds between elements of a musculoskeletal system or its analogs.","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"RO:0002328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biomechanically_related_to","termid":"RO:0002567"}


id: GO:1904651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fat cell apoptotic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:17024416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"is_a","term_name":"regulation of fat cell apoptotic process","termid":"GO:1904649"},{"relation_name":"positively_regulates","term_name":"fat cell apoptotic process","termid":"GO:1904606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of fat cell apoptotic process","synonyms":[{"name":"activation of adipocyte apoptosis","type":"narrow"},{"name":"activation of adipocyte apoptotic process","type":"narrow"},{"name":"activation of adipose cell apoptosis","type":"narrow"},{"name":"activation of adipose cell apoptotic process","type":"narrow"},{"name":"activation of fat cell apoptosis","type":"narrow"},{"name":"activation of fat cell apoptotic process","type":"narrow"},{"name":"positive regulation of adipocyte apoptosis","type":"narrow"},{"name":"positive regulation of adipocyte apoptotic process","type":"exact"},{"name":"positive regulation of adipose cell apoptosis","type":"narrow"},{"name":"positive regulation of adipose cell apoptotic process","type":"exact"},{"name":"positive regulation of fat cell apoptosis","type":"narrow"},{"name":"up regulation of adipocyte apoptosis","type":"narrow"},{"name":"up regulation of adipocyte apoptotic process","type":"exact"},{"name":"up regulation of adipose cell apoptosis","type":"narrow"},{"name":"up regulation of adipose cell apoptotic process","type":"exact"},{"name":"up regulation of fat cell apoptosis","type":"narrow"},{"name":"up regulation of fat cell apoptotic process","type":"exact"},{"name":"up-regulation of adipocyte apoptosis","type":"narrow"},{"name":"up-regulation of adipocyte apoptotic process","type":"exact"},{"name":"up-regulation of adipose cell apoptosis","type":"narrow"},{"name":"up-regulation of adipose cell apoptotic process","type":"exact"},{"name":"up-regulation of fat cell apoptosis","type":"narrow"},{"name":"up-regulation of fat cell apoptotic process","type":"exact"},{"name":"upregulation of adipocyte apoptosis","type":"narrow"},{"name":"upregulation of adipocyte apoptotic process","type":"exact"},{"name":"upregulation of adipose cell apoptosis","type":"narrow"},{"name":"upregulation of adipose cell apoptotic process","type":"exact"},{"name":"upregulation of fat cell apoptosis","type":"narrow"},{"name":"upregulation of fat cell apoptotic process","type":"exact"}],"termid":"GO:1904651"}


id: PBO:0073906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 15 member 4","termid":"PBO:0073906"}


id: SO:0001115
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A left handed helix is a region of peptide where the coiled conformation turns in an anticlockwise, left handed screw.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide_helix","termid":"SO:0001114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"left_handed_peptide_helix","secondary_identifiers":["BS:00222"],"synonyms":[{"name":"helix-l","type":"related"},{"name":"left handed helix","type":"exact"}],"termid":"SO:0001115"}


id: PBO:0034118
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-helper_property","termid":"PBO:0034118"}


id: MONDO:0034961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare brainstem or cerebellar disorder with ophthalmic involvement as a major feature (obsolete MONDO:0034961)","secondary_identifiers":["Orphanet:519341"],"termid":"MONDO:0034961","xrefs":{"Monarch":{"xref_id":"0034961"}}}


id: MONDO:0000681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An agnosia that is a loss of the ability to recognize or identify objects by touch alone.","definition_xrefs":["DOID:0060151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mental disorder","termid":"MONDO:0005084"},{"relation_name":"is_a","term_name":"agnosia","termid":"MONDO:0005638"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tactile agnosia","termid":"MONDO:0000681","xrefs":{"Monarch":{"xref_id":"0000681"}}}


id: GO:1900386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of flavonol biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of flavonoid biosynthetic process","termid":"GO:0009963"},{"relation_name":"is_a","term_name":"regulation of flavonol biosynthetic process","termid":"GO:1900384"},{"relation_name":"positively_regulates","term_name":"flavonol biosynthetic process","termid":"GO:0051555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of flavonol biosynthetic process","synonyms":[{"name":"activation of flavonol biosynthetic process","type":"narrow"},{"name":"up regulation of flavonol biosynthetic process","type":"exact"},{"name":"up-regulation of flavonol biosynthetic process","type":"exact"},{"name":"upregulation of flavonol biosynthetic process","type":"exact"}],"termid":"GO:1900386"}


id: MONDO:0100465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A complex neurodevelopmental disorder that involves more than one phenotype associated with the central nervous system, including but not limited to intellectual disability, autism, and seizures (epilepsy), in addition to one or more structural or functional anomaly(ies) that develops prenatally.","direct_ancestors":[{"relation_name":"is_a","term_name":"complex neurodevelopmental disorder","termid":"MONDO:0100038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"complex neurodevelopmental disorder with or without congenital anomalies","termid":"MONDO:0100465","xrefs":{"Monarch":{"xref_id":"0100465"}}}


id: PR:G2TRL0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC922.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRL0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C922.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC922.09","synonyms":[{"name":"Spom972h-SPAC922.09","type":"exact"}],"termid":"PR:G2TRL0"}


id: GO:0099556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse, via the release and reception of carbon monoxide molecules, that modulates the synaptic transmission properties of the synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling by carbon monoxide","termid":"GO:0099549"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by soluble gas, modulating synaptic transmission","termid":"GO:0099554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"trans-synaptic signaling by carbon monoxide, modulating synaptic transmission","termid":"GO:0099556"}


id: PR:O74452
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- scw1 gene.","definition_xrefs":["UniProtKB:O74452","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall integrity protein scw1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.07","synonyms":[{"name":"Spom972h-scw1","type":"exact"},{"name":"strong cell wall protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74452"}


id: MONDO:0100152
data:
  {"annotated_genes":["SJAG_04754"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010584"}]},"cv_name":"mondo","definition":"Any dyskeratosis congenita in which the cause of the disease is a mutation in the DKC1 gene.","definition_xrefs":["PMID:10583221","PMID:12437656","MONDO:patterns/disease_series_by_gene","PMID:14648217","PMID:19633571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dyskeratosis congenita","termid":"MONDO:0015780"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"DKC1-related disorder","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"DKC1-related disorder","type":"exact"}],"termid":"MONDO:0100152","terms_by_termid":{"MONDO:0010584":null},"xrefs":{"Monarch":{"xref_id":"0100152"}}}


id: PBO:0045169
data:
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id: GO:1905138
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id: PBO:0113057
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id: PBO:0002404
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id: PBO:0083126
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id: GO:0071063
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id: GO:0019637
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id: PBO:0050951
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id: PBO:0110329
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP3S1 pseudogene 1","termid":"PBO:0110329"}


id: PBO:0046215
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 8","termid":"PBO:0046215"}


id: MONDO:0016982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant tumor arising from the endothelial cells of the blood vessels. Microscopically, it is characterized by frequently open vascular anastomosing and branching channels. The malignant cells that line the vascular channels are spindle or epithelioid and often display hyperchromatic nuclei. Angiosarcomas most frequently occur in the skin and breast. Patients with long-standing lymphedema are at increased risk of developing angiosarcoma.","definition_xrefs":["NCIT:C3088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular cancer","termid":"MONDO:0002095"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"angiosarcoma","secondary_identifiers":["EFO:0003968","ICDO:9120/3","MedDRA:10002476","HP:0200058","MESH:D006394","ONCOTREE:ANGS","Orphanet:263413","UMLS:C0018923","SCTID:403977003","ICD9:171.9","MEDGEN:42385","DOID:0001816","GARD:20900"],"synonyms":[{"name":"angiosarcoma","type":"exact"},{"name":"angiosarcoma (disease)","type":"exact"},{"name":"blood vessel sarcoma","type":"exact"},{"name":"hemangiosarcoma","type":"exact"},{"name":"hemangiosarcoma, malignant","type":"exact"},{"name":"malignant angioendothelioma","type":"exact"},{"name":"malignant hemangioendothelioma","type":"exact"},{"name":"sarcoma of blood vessel","type":"exact"},{"name":"vascular sarcoma","type":"exact"}],"termid":"MONDO:0016982","xrefs":{"Monarch":{"xref_id":"0016982"}}}


id: PR:O42980
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nep1 gene.","definition_xrefs":["UniProtKB:O42980","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8-specific protease 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D11.01","synonyms":[{"name":"Spom972h-nep1","type":"exact"}],"termid":"PR:O42980"}


id: GO:0008091
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Membrane associated dimeric protein (240 and 220 kDa) of erythrocytes. Forms a complex with ankyrin, actin and probably other components of the membrane cytoskeleton, so that there is a mesh of proteins underlying the plasma membrane, potentially restricting the lateral mobility of integral proteins.","definition_xrefs":["GOC:curators","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cortical actin cytoskeleton","termid":"GO:0030864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0015629","GO:0005737","GO:0032991","GO:0005938"],"is_obsolete":false,"name":"spectrin","secondary_identifiers":["NIF_Subcellular:sao536287099","Wikipedia:Spectrin"],"termid":"GO:0008091"}


id: PBO:0068460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 36, pseudogene","termid":"PBO:0068460"}


id: PBO:0063456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 12","termid":"PBO:0063456"}


id: MONDO:0100343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A phenotypic variant of Bartter syndrome presenting antenatally with maternal polyhydramnios, pre-term delivery and postnatally with polyuria, and nephrocalcinosis. Hypokalemic alkalosis, increased levels of plasma renin and aldosterone, low blood pressure and vascular resistance to angiotensin II are characteristically associated. Genotypically they comprise Type 1 and Type 2 Bartter syndrome.","definition_xrefs":["Orphanet:93604"],"gene_count":0,"genotype_count":0,"name":"obsolete antenatal Bartter syndrome (obsolete MONDO:0100343)","synonyms":[{"name":"Bartter syndrome, furosemide type","type":"exact"},{"name":"Bartter syndrome, furosemide-amiloride type","type":"exact"},{"name":"hyperprostaglandin E syndrome","type":"exact"}],"termid":"MONDO:0100343","xrefs":{"Monarch":{"xref_id":"0100343"}}}


id: FYPO:0001178
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable when cells in a culture in stationary phase are deprived of nitrogen.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"loss of viability upon nutrient depletion","termid":"FYPO:0000244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"loss of viability upon nitrogen starvation","synonyms":[{"name":"decreased viability upon nitrogen starvation","type":"exact"},{"name":"loss of cell population viability upon nitrogen starvation","type":"exact"},{"name":"loss of viability in stationary phase upon nitrogen depletion","type":"related"},{"name":"loss of viability upon nitrogen depletion","type":"exact"},{"name":"loss of viability upon nitrogen deprivation","type":"exact"},{"name":"reduced viability upon nitrogen starvation","type":"exact"}],"termid":"FYPO:0001178"}


id: MONDO:0016354
data:
  {"annotated_genes":["SJAG_03206","SJAG_00995","SJAG_02556","SJAG_02031"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012531"},{"annotations":[88472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010212"},{"annotations":[88431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010215"},{"annotations":[88379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010216"}]},"cv_name":"mondo","definition":"Xeroderma pigmentosum/Cockayne syndrome complex (XP/CS complex) is characterized by the cutaneous features of xeroderma pigmentosum (XP) together with the systemic and neurological features of Cockayne syndrome (CS).","definition_xrefs":["Orphanet:220295"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"progeroid syndrome","termid":"MONDO:0015333"},{"relation_name":"excluded_subClassOf","term_name":"premature aging syndrome","termid":"MONDO:0019303"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary photodermatosis","termid":"MONDO:0015951"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00995":null,"SJAG_02031":null,"SJAG_02556":null,"SJAG_03206":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"xeroderma pigmentosum-Cockayne syndrome complex","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:930080","GARD:17130","ICD10CM:Q82.1","NCIT:C156031","UMLS:C4304411","icd11.foundation:2002862606"],"synonyms":[{"name":"XP/CS complex","type":"exact"}],"termid":"MONDO:0016354","terms_by_termid":{"MONDO:0010212":null,"MONDO:0010215":null,"MONDO:0010216":null,"MONDO:0012531":null},"xrefs":{"Monarch":{"xref_id":"0016354"}}}


id: GO:0000201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a MAP kinase to the nucleus that occurs in the context of cell wall organization or biogenesis.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPK import into nucleus involved in cell wall organization or biogenesis (obsolete GO:0000201)","synonyms":[{"name":"MAPK import into nucleus involved in cell wall biogenesis","type":"narrow"},{"name":"MAPK import into nucleus involved in cell wall integrity","type":"exact"},{"name":"cell wall biogenesis, MAPK import into nucleus","type":"exact"},{"name":"cell wall biogenesis, nuclear translocation of MAPK","type":"narrow"},{"name":"nuclear translocation of MAPK involved in cell wall biogenesis","type":"narrow"},{"name":"nuclear translocation of MAPK involved in cell wall integrity","type":"narrow"}],"termid":"GO:0000201"}


id: PBO:0059803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 29","termid":"PBO:0059803"}


id: GO:0061550
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a cranial ganglion over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ganglion development","termid":"GO:0061548"},{"relation_name":"part_of","term_name":"cranial nerve development","termid":"GO:0021545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cranial ganglion development","synonyms":[{"name":"cranial ganglia development","type":"related"}],"termid":"GO:0061550"}


id: MONDO:0011152
data:
  {"annotated_genes":["SJAG_02313"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88722],"is_not":false,"summary":null,"term":"MONDO:0011152"}]},"cv_name":"mondo","definition":"3-Phosphoglycerate dehydrogenase deficiency (3-PGDH deficiency) is an autosomal recessive form of serine deficiency syndrome characterized clinically in the few reported cases by congenital microcephaly, psychomotor retardation and intractable seizures in the infantile form and by absence seizures, moderate developmental delay and behavioral disorders in the juvenile form","definition_xrefs":["Orphanet:79351"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"3-phosphoglycerate dehydrogenase deficiency","termid":"MONDO:0018491"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"PHGDH deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1866174","GARD:16718","OMIM:601815","MEDGEN:400935","DOID:0050722","MESH:C566618"],"synonyms":[{"name":"3-phosphoglycerate dehydrogenase deficiency, infantile/juvenile form","type":"related"},{"name":"PHGDH deficiency","type":"exact"},{"name":"PHGDHD","type":"related"},{"name":"PHOSPHOGLYCERATE dehydrogenase deficiency","type":"exact"}],"termid":"MONDO:0011152","terms_by_termid":{"MONDO:0011152":null},"xrefs":{"Monarch":{"xref_id":"0011152"}}}


id: MONDO:0007626
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of fourth cranial nerve palsy that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fourth cranial nerve palsy","termid":"MONDO:0001146"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"nuclear oculomotor paralysis","termid":"MONDO:0015083"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"familial congenital palsy of trochlear nerve","secondary_identifiers":["UMLS:C1850996","MEDGEN:338185","MESH:C565007","GARD:10355","OMIM:136480","Orphanet:91498"],"synonyms":[{"name":"fourth cranial nerve palsy, familial congenital","type":"related"},{"name":"hereditary fourth cranial nerve palsy","type":"exact"},{"name":"strabismus from Superior oblique palsy","type":"related"},{"name":"superior oblique oculomotor palsy, familial congenital","type":"related"},{"name":"trochlear nerve palsy, familial congenital","type":"related"}],"termid":"MONDO:0007626","xrefs":{"Monarch":{"xref_id":"0007626"}}}


id: PBO:0030478
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_glutamine_level","termid":"PBO:0030478"}


id: GO:1904602
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of serotonin-activated cation-selective channel activity. Mainly found in pre- and postsynaptic membranes of the brain and gastrointestinal tract. Depending on its location it transports Ca2+, Mg2+, Na+ or K+. It is always a pentamer, containing at least the 5HT3A subunit forming 5HT3A homopentamers or 5HT3A/B heteropentamers. In human, 5HT3A/C, A/D and A/E heteropentamers also exist.","definition_xrefs":["GO_REF:0000088","GOC:bhm","PMID:16116092","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation channel complex","termid":"GO:0034703"},{"relation_name":"is_a","term_name":"serotonin receptor complex","termid":"GO:0098665"},{"relation_name":"is_a","term_name":"neurotransmitter receptor complex","termid":"GO:0098878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"serotonin-activated cation-selective channel complex","synonyms":[{"name":"5-HT-3 receptor complex","type":"exact"},{"name":"5-HT3 receptor complex","type":"exact"},{"name":"5-hydroxytryptamine receptor 3 complex","type":"exact"},{"name":"5HT3 receptor complex","type":"exact"},{"name":"serotonin receptor complex","type":"broad"}],"termid":"GO:1904602"}


id: PBO:0036420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP, GTPase activating protein Rga4","termid":"PBO:0036420"}


id: MONDO:0043475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An episode of sudden and transient loss of consciousness sometimes associated with seizures. It is caused by a sudden decrease of the cardiac output that results from a sudden cardiac dysrhythmia. Typically patients develop an initial pallor, followed by facial flush during recovery.","definition_xrefs":["NCIT:C79765"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"atrioventricular dissociation","termid":"MONDO:0008848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adams-Stokes syndrome","secondary_identifiers":["SCTID:46935006","MESH:D000219","UMLS:C0001396","MEDGEN:1741"],"synonyms":[{"name":"Adam Stokes attacks","type":"related"},{"name":"Adam-Stokes attacks","type":"related"},{"name":"Adams Stokes syndrome","type":"related"},{"name":"Stokes Adams attacks","type":"related"},{"name":"Stokes Adams syndrome","type":"related"},{"name":"Stokes-Adams attacks","type":"related"},{"name":"Stokes-Adams syndrome","type":"exact"},{"name":"Stokes-Adams-morgagni syndrome","type":"related"},{"name":"attacks, Adam-Stokes","type":"related"},{"name":"attacks, Stokes-Adams","type":"related"},{"name":"syndrome, Adams-Stokes","type":"related"},{"name":"syndrome, Stokes-Adams","type":"related"}],"termid":"MONDO:0043475","xrefs":{"Monarch":{"xref_id":"0043475"}}}


id: GO:0060756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Behavior by which an organism locates food.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"foraging behavior","termid":"GO:0060756"}


id: PBO:0082311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aspartyl-tRNA synthetase, primarily cytoplasmic; homodimeric enzyme that catalyzes the specific aspartylation of tRNA(Asp); class II aminoacyl tRNA synthetase; binding to its own mRNA may confer autoregulation; shares five highly conserved amino acids with human that when mutated cause leukoencephalopathy characterized by hypomyelination with brain stem and spinal cord involvement and leg spasticity (HBSL)","termid":"PBO:0082311"}


id: FYPO:0003338
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the actomyosin contractile ring is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton morphology during vegetative growth","termid":"FYPO:0000350"},{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring","termid":"FYPO:0004736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0004803","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"abnormal actomyosin contractile ring morphology","synonyms":[{"name":"abnormal actomyosin contractile ring morphology during mitotic cell cycle","type":"related"},{"name":"abnormal actomyosin contractile ring morphology during vegetative growth","type":"exact"},{"name":"abnormal contractile ring morphology","type":"exact"},{"name":"abnormal cytokinetic contractile ring morphology","type":"exact"},{"name":"abnormal mitotic contractile ring morphology","type":"exact"}],"termid":"FYPO:0003338"}


id: GO:0032073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops or reduces the rate of a restriction endodeoxyribonuclease activity, the catalysis of endonucleolytic cleavage of DNA in a site-specific manner, resulting in double-strand breaks.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of restriction endodeoxyribonuclease activity (obsolete GO:0032073)","synonyms":[{"name":"down regulation of restriction endodeoxyribonuclease activity","type":"exact"},{"name":"down-regulation of restriction endodeoxyribonuclease activity","type":"exact"},{"name":"downregulation of restriction endodeoxyribonuclease activity","type":"exact"},{"name":"inhibition of restriction endodeoxyribonuclease activity","type":"narrow"},{"name":"restriction alleviation","type":"narrow"},{"name":"restriction endodeoxyribonuclease inhibitor","type":"related"},{"name":"restriction enzyme inhibitor","type":"related"}],"termid":"GO:0032073"}


id: PBO:0015684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"name derivation, Eighteen Interacting Centromere protein","termid":"PBO:0015684"}


id: PBO:0029181
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_trehalose_level_during_heat_shock","termid":"PBO:0029181"}


id: PBO:0073320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine incorporator 3","termid":"PBO:0073320"}


id: PBO:0069996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1291, pseudogene","termid":"PBO:0069996"}


id: GO:1903457
data:
  {"annotated_genes":["SJAG_03804"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[82150],"is_not":false,"summary":null,"term":"GO:1903457"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lactate.","definition_xrefs":["PMID:8941775","GO_REF:0000068","GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate metabolic process","termid":"GO:0006089"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03804":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"lactate catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"lactate breakdown","type":"exact"},{"name":"lactate catabolism","type":"exact"},{"name":"lactate degradation","type":"exact"}],"termid":"GO:1903457","terms_by_termid":{"GO:1903457":null}}


id: MONDO:0010407
data:
  {"annotated_genes":["SJAG_02371"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86860],"is_not":false,"summary":null,"term":"MONDO:0010407"}]},"cv_name":"mondo","definition":"An X-linked syndromic intellectual disability characterized by moderate to severe intellectual deficit in boys and moderate intellectual deficit in girls. It has been described in 14 members from four generations of one family. Macrocephaly was reported and holoprosencephaly may also be present (two family members). The mode of transmission is X-linked semi-dominant.","definition_xrefs":["Orphanet:85328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02371":null},"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked syndromic, Turner type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060811","DOID:0060829","OMIM:300706","OMIM:309590","GARD:81","MEDGEN:394425","MESH:C563154","MESH:C567476","OMIM:300612","Orphanet:3056","SCTID:725912001","UMLS:C2678046"],"synonyms":[{"name":"Brooks Wisniewski Brown syndrome","type":"exact"},{"name":"Brooks-Wisniewski-Brown Syndrome","type":"exact"},{"name":"Brooks-Wisniewski-Brown syndrome","type":"exact"},{"name":"Juberg-Marsidi Syndrome","type":"related"},{"name":"MRXST","type":"exact"},{"name":"X-linked intellectual disability, Brooks type","type":"exact"},{"name":"X-linked intellectual disability, Turner type","type":"exact"},{"name":"X-linked mental retardation Brooks type","type":"related"},{"name":"intellectual disability, X-linked syndromic, Turner type","type":"exact"},{"name":"mental retardation and macrocephaly syndrome","type":"exact"},{"name":"mental retardation, X-Linked, with growth retardation, deafness, and microgenitalism","type":"related"},{"name":"mental retardation, X-linked, syndromic, Brooks-Wisniewski-Brown Type","type":"related"},{"name":"mental retardation, X-linked, syndromic, Brooks-Wisniewski-Brown type","type":"related"},{"name":"mental retardation, X-linked, syndromic, Turner type","type":"exact"},{"name":"syndromic X-linked intellectual disability Turner type","type":"exact"}],"termid":"MONDO:0010407","terms_by_termid":{"MONDO:0010407":null},"xrefs":{"Monarch":{"xref_id":"0010407"}}}


id: PBO:0089233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEM domain nuclear inner membrane protein Heh1/Lem2","termid":"PBO:0089233"}


id: GO:0060991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The aggregation, arrangement and bonding together of a set of macromolecules to form a macromolecular complex that contains a tube of lipid surrounded by a protein coat involved in cytokinesis.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete lipid tube assembly involved in cytokinesis (obsolete GO:0060991)","synonyms":[{"name":"lipid tube assembly involved in cytokinesis","type":"exact"},{"name":"lipid tubulation involved in cytokinesis","type":"exact"}],"termid":"GO:0060991"}


id: PBO:0043322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAP-Gly domain containing linker protein family member 4","termid":"PBO:0043322"}


id: FYPO:0004946
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to one or more potassium ionophores. A potassium ionophore is any compound that can carry potassium ions through membranes of cells or organelles.","definition_xrefs":["CHEBI:24869","PMID:25483891","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to potassium ionophore","synonyms":[{"name":"hypersensitive to potassium ionophore","type":"exact"},{"name":"sensitive to potassium ionophore during mitotic cell cycle","type":"related"},{"name":"sensitive to potassium ionophore during vegetative growth","type":"exact"}],"termid":"FYPO:0004946"}


id: GO:0070520
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha4-beta1 integrin complex bound to membrane protein CD81, a member of the tetraspan family.","definition_xrefs":["PMID:8757325","PMID:10229664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alpha4-beta1 integrin-CD81 complex","synonyms":[{"name":"ITGA4-ITGB1-CD81 complex","type":"narrow"}],"termid":"GO:0070520"}


id: GO:0047427
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-cyano-L-alanine + 2 H2O + H+ = L-aspartate + NH4.","definition_xrefs":["RHEA:11188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrilase activity","termid":"GO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"cyanoalanine nitrilase activity","secondary_identifiers":["EC:3.5.5.4","KEGG_REACTION:R00486","MetaCyc:3.5.5.4-RXN"],"synonyms":[{"name":"3-cyano-L-alanine aminohydrolase activity","type":"related"},{"name":"beta-cyanoalanine nitrilase activity","type":"related"}],"termid":"GO:0047427"}


id: PBO:0071461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 2","termid":"PBO:0071461"}


id: GO:0032049
data:
  {"annotated_genes":["SJAG_03563","SJAG_00168","SJAG_03700","SJAG_04317"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73004,81805,94853,119710],"is_not":false,"summary":null,"term":"GO:0032049"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cardiolipin, 1,3-bis(3-phosphatidyl)glycerol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylglycerol biosynthetic process","termid":"GO:0006655"},{"relation_name":"is_a","term_name":"cardiolipin metabolic process","termid":"GO:0032048"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00168":null,"SJAG_03563":null,"SJAG_03700":null,"SJAG_04317":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"cardiolipin biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1483076","MetaCyc:PWY-5269"],"synonyms":[{"name":"diphosphatidylglycerol biosynthesis","type":"related"},{"name":"diphosphatidylglycerol biosynthetic process","type":"related"}],"termid":"GO:0032049","terms_by_termid":{"GO:0032049":null}}


id: PBO:0063813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylase kinase catalytic subunit gamma 2","termid":"PBO:0063813"}


id: GO:0018388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The condensation of pyruvate through the 2-oxo group with the N-terminal valine of proteins to form the derivative N-pyruvic acid 2-iminyl-L-valine.","definition_xrefs":["RESID:AA0275"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-valine condensation with pyruvate to form N-pyruvic acid 2-iminyl-L-valine (obsolete GO:0018388)","termid":"GO:0018388"}


id: SO:0000561
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Seven nucleotide recombination site (e.g. CACAGTG), part of V-gene, D-gene or J-gene recombination feature of an immunoglobulin or T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_signal_feature","termid":"SO:0000939"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heptamer_of_recombination_feature_of_vertebrate_immune_system_gene","synonyms":[{"name":"HEPTAMER","type":"related"},{"name":"heptamer of recombination feature of vertebrate immune system gene","type":"exact"}],"termid":"SO:0000561"}


id: GO:0031932
data:
  {"annotated_genes":["SJAG_01020","SJAG_03067","SJAG_01320","SJAG_04987","SJAG_04460","SJAG_00117","SJAG_02723"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[57509,60733,74336,78846,79298,80567,101191],"is_not":false,"summary":null,"term":"GO:0031932"}]},"cv_name":"cellular_component","definition":"A protein complex that contains at least TOR (target of rapamycin) and Rictor (rapamycin-insensitive companion of TOR), or orthologs of, in complex with other signaling components. Mediates the phosphorylation and activation of PKB (also called AKT). In Saccharomyces, the complex contains Avo1p, Avo2p, Tsc11p, Lst8p, Bit61p, Slm1p, Slm2p, and Tor2p.","definition_xrefs":["GOC:bf","GOC:jh","PMID:14736892","PMID:15780592","PMID:16469695","PMID:21548787"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TOR complex","termid":"GO:0038201"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00117":null,"SJAG_01020":null,"SJAG_01320":null,"SJAG_02723":null,"SJAG_03067":null,"SJAG_04460":null,"SJAG_04987":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"TORC2 complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Wikipedia:MTORC1"],"synonyms":[{"name":"TOR complex 2","type":"exact"},{"name":"TORC 2 complex","type":"exact"},{"name":"TORC2","type":"exact"},{"name":"mTORC2","type":"narrow"},{"name":"rapamycin and nutrient-insensitive TOR complex","type":"exact"}],"termid":"GO:0031932","terms_by_termid":{"GO:0031932":null}}


id: PBO:0029128
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_Golgi_apparatus_morphology","termid":"PBO:0029128"}


id: GO:1905827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of selenocysteine metabolic process.","definition_xrefs":["GOC:TermGenie","PMID:19716792","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amino acid metabolic process","termid":"GO:0045764"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of selenocysteine metabolic process","termid":"GO:1905825"},{"relation_name":"positively_regulates","term_name":"selenocysteine metabolic process","termid":"GO:0016259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"positive regulation of selenocysteine metabolic process","synonyms":[{"name":"activation of selenocysteine metabolic process","type":"narrow"},{"name":"activation of selenocysteine metabolism","type":"narrow"},{"name":"positive regulation of selenocysteine metabolism","type":"exact"},{"name":"up regulation of selenocysteine metabolic process","type":"exact"},{"name":"up regulation of selenocysteine metabolism","type":"exact"},{"name":"up-regulation of selenocysteine metabolic process","type":"exact"},{"name":"up-regulation of selenocysteine metabolism","type":"exact"},{"name":"upregulation of selenocysteine metabolic process","type":"exact"},{"name":"upregulation of selenocysteine metabolism","type":"exact"}],"termid":"GO:1905827"}


id: MONDO:0032598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"genetic developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 68","secondary_identifiers":["UMLS:C4748688","DOID:0112204","OMIM:618201","GARD:16310","MEDGEN:1648479"],"synonyms":[{"name":"DEE68","type":"exact"},{"name":"EIEE68","type":"exact"},{"name":"EPILEPTIC ENCEPHALOPATHY, EARLY INFANTILE, 68","type":"exact"},{"name":"developmental and epileptic encephalopathy 68","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 68","type":"exact"}],"termid":"MONDO:0032598","xrefs":{"Monarch":{"xref_id":"0032598"}}}


id: GO:0070530
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein upon poly-ubiquitination formed by linkages between lysine residues at position 63 in the target protein.","definition_xrefs":["PMID:17525341","PMID:15556404","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyubiquitin modification-dependent protein binding","termid":"GO:0031593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"K63-linked polyubiquitin modification-dependent protein binding","termid":"GO:0070530"}


id: PR:Q10245
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A very-long-chain 3-oxoacyl-CoA reductase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00944","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"very-long-chain 3-oxoacyl-CoA reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.15","secondary_identifiers":["UniProtKB:Q10245"],"synonyms":[{"name":"3-ketoacyl-CoA reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"3-ketoreductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"KAR (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-HSD17B12","type":"exact"},{"name":"microsomal beta-keto-reductase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10245"}


id: PBO:0051076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 6-13","termid":"PBO:0051076"}


id: GO:0032028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the head/neck region of a myosin heavy chain.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin heavy chain binding","termid":"GO:0032036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0008092","GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"myosin head/neck binding","termid":"GO:0032028"}


id: GO:0060306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the establishment or extent of a membrane potential in the polarizing direction towards the resting potential, usually from positive to negative.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:mtg_cardiac_conduct_nov11","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"},{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"},{"relation_name":"regulates","term_name":"membrane repolarization","termid":"GO:0086009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of membrane repolarization","termid":"GO:0060306"}


id: FYPO:0000405
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the G2/M transition of the mitotic cell cycle is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal cell cycle phase transition","termid":"FYPO:0006916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic G2/M phase transition","synonyms":[{"name":"cell cycle progression through the G2/M phase transition: normal","type":"related"},{"name":"normal G2/M phase transition during mitotic cell cycle","type":"exact"},{"name":"normal cell cycle progression through mitotic G2/M phase transition","type":"exact"},{"name":"normal mitotic G2/M phase transition during vegetative growth","type":"exact"}],"termid":"FYPO:0000405"}


id: PBO:0035779
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_kinase_activity_during_mitosis","termid":"PBO:0035779"}


id: PBO:0076745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-complex-associated-testis-expressed 1","termid":"PBO:0076745"}


id: GO:0034316
data:
  {"annotated_genes":["SJAG_03455"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76246],"is_not":false,"summary":null,"term":"GO:0034316"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of actin nucleation mediated by the Arp2/3 complex and interacting proteins.","definition_xrefs":["GOC:mah","PMID:16959963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Arp2/3 complex-mediated actin nucleation","termid":"GO:0034315"},{"relation_name":"is_a","term_name":"negative regulation of actin nucleation","termid":"GO:0051126"},{"relation_name":"negatively_regulates","term_name":"Arp2/3 complex-mediated actin nucleation","termid":"GO:0034314"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"negative regulation of Arp2/3 complex-mediated actin nucleation","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0034316","terms_by_termid":{"GO:0034316":null}}


id: GO:1901076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of engulfment of apoptotic cell.","definition_xrefs":["GO:kmv","PMID:19402756","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phagocytosis, engulfment","termid":"GO:0060100"},{"relation_name":"is_a","term_name":"regulation of engulfment of apoptotic cell","termid":"GO:1901074"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic cell clearance","termid":"GO:2000427"},{"relation_name":"positively_regulates","term_name":"engulfment of apoptotic cell","termid":"GO:0043652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"positive regulation of engulfment of apoptotic cell","synonyms":[{"name":"activation of engulfment of apoptotic cell","type":"narrow"},{"name":"activation of engulfment of apoptotic cell corpse","type":"narrow"},{"name":"activation of engulfment of cell corpse","type":"narrow"},{"name":"positive regulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"positive regulation of engulfment of cell corpse","type":"exact"},{"name":"up regulation of engulfment of apoptotic cell","type":"exact"},{"name":"up regulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"up regulation of engulfment of cell corpse","type":"exact"},{"name":"up-regulation of engulfment of apoptotic cell","type":"exact"},{"name":"up-regulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"up-regulation of engulfment of cell corpse","type":"exact"},{"name":"upregulation of engulfment of apoptotic cell","type":"exact"},{"name":"upregulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"upregulation of engulfment of cell corpse","type":"exact"}],"termid":"GO:1901076"}


id: GO:0042776
data:
  {"annotated_genes":["SJAG_05204","SJAG_03925","SJAG_00542","SJAG_02598","SJAG_07003","SJAG_MIT15","SJAG_00985","SJAG_00836","SJAG_MIT37","SJAG_04122","SJAG_00438","SJAG_00915","SJAG_02564","SJAG_03114","SJAG_MIT09","SJAG_02105","SJAG_04422","SJAG_00133"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90944,94666,95092,95681,96661,103636,104857,105471,105497,106841,109645,109737,110629,117705,120943,120949,120955],"is_not":false,"summary":null,"term":"GO:0042776"},{"annotations":[119868],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905707"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ATP driven by transport of protons across a mitochondrial membrane to generate an electrochemical gradient (proton-motive force).","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton motive force-driven ATP synthesis","termid":"GO:0015986"},{"relation_name":"part_of","term_name":"oxidative phosphorylation","termid":"GO:0006119"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_02105":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_03114":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_04422":null,"SJAG_05204":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"part_of","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0044281","GO:0006091","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"proton motive force-driven mitochondrial ATP synthesis","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-163210"],"synonyms":[{"name":"mitochondrial ATP synthesis coupled proton transport","type":"related"},{"name":"mitochondrial proton transport","type":"related"}],"termid":"GO:0042776","terms_by_termid":{"GO:0042776":null,"GO:1905707":null}}


id: MONDO:0010085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Schilder's disease is a progressive demyelinating disorder of the central nervous system.","definition_xrefs":["Orphanet:59298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"demyelinating disease","termid":"MONDO:0002562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"Schilder disease","secondary_identifiers":["GARD:16661","ICD9:341.1","SCTID:49692006","UMLS:C0007795","OMIM:272100","ICD10CM:G37.0","MEDGEN:3324"],"synonyms":[{"name":"Schilder disease","type":"exact"},{"name":"Schilder's disease","type":"exact"},{"name":"myelinoclastic diffuse sclerosis","type":"exact"},{"name":"sudanophillic cerebral sclerosis","type":"related"}],"termid":"MONDO:0010085","xrefs":{"Monarch":{"xref_id":"0010085"}}}


id: GO:0003322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a pancreatic A cell over time, from its formation to the mature structure. A pancreatic A cell is a cell in the pancreas that secretes glucagon.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell development","termid":"GO:0002064"},{"relation_name":"part_of","term_name":"pancreatic A cell differentiation","termid":"GO:0003310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreatic A cell development","synonyms":[{"name":"pancreatic alpha cell development","type":"exact"}],"termid":"GO:0003322"}


id: PR:000050494
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit rpb1 (Schizosaccharomyces pombe) that has been phosphorylated at either position 2, 5, or 7 of one or more C-terminal heptad repeats (YSPTSPS).","definition_xrefs":["PomBase:VW","PRO:DAN","PMID:28367989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-directed RNA polymerase II subunit rpb1 (Schizosaccharomyces pombe)","termid":"PR:000044736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rpb1/Phos(CTD-S2,S5,S7)","pombase_gene_id":"SPBC28F2.12","synonyms":[{"name":"PomBase_original_PRO_term_name: DNA-directed RNA polymerase II subunit rpb1 CTD-phosphorylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rpb1/Phos:CTD","type":"exact"},{"name":"rpb1/Phos(CTD-S2,S5,S7)","type":"exact"}],"termid":"PR:000050494"}


id: GO:0008106
data:
  {"annotated_genes":["SJAG_01869","SJAG_02963","SJAG_02010","SJAG_00242","SJAG_03958","SJAG_04660","SJAG_01543","SJAG_03821","SJAG_00038"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79257,94284,108370,108371],"is_not":false,"summary":null,"term":"GO:0008106"},{"annotations":[76048,93631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004032"},{"annotations":[97568,103001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032866"},{"annotations":[103002,97569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032867"},{"annotations":[116255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050236"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an alcohol + NADP+ = an aldehyde or ketone + NADPH + H+.","definition_xrefs":["EC:1.1.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase [NAD(P)+] activity","termid":"GO:0018455"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00038":null,"SJAG_00242":null,"SJAG_01543":null,"SJAG_01869":null,"SJAG_02010":null,"SJAG_02963":null,"SJAG_03821":null,"SJAG_03958":null,"SJAG_04660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"alcohol dehydrogenase (NADP+) activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"NADP-aldehyde reductase activity","type":"exact"},{"name":"alcohol:NADP dehydrogenase activity","type":"exact"},{"name":"aldehyde reductase (NADPH) activity","type":"exact"}],"termid":"GO:0008106","terms_by_termid":{"GO:0004032":null,"GO:0008106":null,"GO:0032866":null,"GO:0032867":null,"GO:0050236":null}}


id: GO:1900358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nigerotriose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of nigerotriose transport","termid":"GO:1900357"},{"relation_name":"negatively_regulates","term_name":"nigerotriose transport","termid":"GO:2001091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of nigerotriose transport","synonyms":[{"name":"down regulation of nigerotriose transport","type":"exact"},{"name":"down-regulation of nigerotriose transport","type":"exact"},{"name":"downregulation of nigerotriose transport","type":"exact"},{"name":"inhibition of nigerotriose transport","type":"narrow"}],"termid":"GO:1900358"}


id: MONDO:0012076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"midface hypoplasia, obesity, developmental delay, and neonatal hypotonia","secondary_identifiers":["MEDGEN:325238","MESH:C563896","OMIM:608624","UMLS:C1837730"],"synonyms":[{"name":"midface hypoplasia, obesity, developmental delay, and neonatal hypotonia","type":"exact"}],"termid":"MONDO:0012076","xrefs":{"Monarch":{"xref_id":"0012076"}}}


id: GO:0004483
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 5'-end (N(7)-methyl 5'-triphosphoguanosine)-ribonucleoside in mRNA or snRNA + S-adenosyl-L-methionine = a 5'-end (N(7)-methyl 5'-triphosphoguanosine)-(2'-O-methyl-ribonucleoside) in mRNA or snRNA + S-adenosyl-L-homocysteine + H+. This activity catalyzes the methylation of the ribose on the first transcribed nucleotide of mRNAs and snRNAs.","definition_xrefs":["EC:2.1.1.57"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"RNA methyltransferase activity","termid":"GO:0008173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0016740","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"methyltransferase cap1 activity","secondary_identifiers":["Reactome:R-HSA-9694521","Reactome:R-HSA-9684030","Reactome:R-HSA-9684032","Reactome:R-HSA-9694499","MetaCyc:2.1.1.57-RXN","Reactome:R-HSA-9834003","Reactome:R-HSA-9694721","Reactome:R-HSA-9684033"],"synonyms":[{"name":"S-adenosyl-L-methionine:mRNA (nucleoside-2'-O-)-methyltransferase activity","type":"related"},{"name":"mRNA (adenosine-2'-O-)-methyltransferase activity","type":"related"},{"name":"mRNA (nucleoside-2'-O-)-methyltransferase activity","type":"related"},{"name":"messenger RNA (nucleoside-2'-)-methyltransferase activity","type":"related"},{"name":"messenger ribonucleate nucleoside 2'-methyltransferase activity","type":"related"}],"termid":"GO:0004483"}


id: PBO:0051078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 6-25","termid":"PBO:0051078"}


id: PBO:0084367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipid binding protein; binds to both free fatty acids with preference for saturated long-chain fatty acids and to sterols; contains two independent lipid-binding sites; involved in the export of free fatty acids and acetylated sterols; export functions are redundant with PRY2, and PRY3; important for survival of cells that accumulate free fatty acids; involved in detoxification  of hydrophobic compounds; secreted glycoprotein and member of the CAP/SCP protein superfamily","termid":"PBO:0084367"}


id: FYPO:0003249
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of histone H3 measured at centromeric dh repeat regions is lower than normal.","definition_xrefs":["PMID:22291963","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of histone H3 in cell","termid":"FYPO:0004578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"decreased level of histone H3 at dh repeat","synonyms":[{"name":"decreased level of histone H3 at dh repeat during mitotic cell cycle","type":"related"},{"name":"decreased level of histone H3 at dh repeat during vegetative growth","type":"exact"},{"name":"reduced level of histone H3 at dh repeat","type":"exact"}],"termid":"FYPO:0003249"}


id: MONDO:0957553
data:
  {"annotated_genes":["SJAG_00600","SJAG_03353","SJAG_03681","SJAG_00229"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87058,87059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014602"},{"annotations":[87065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014605"},{"annotations":[87873],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032697"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00600":null,"SJAG_03353":null,"SJAG_03681":null},"genotype_count":0,"is_obsolete":false,"name":"Houge-Janssens syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:616355"],"termid":"MONDO:0957553","terms_by_termid":{"MONDO:0014602":null,"MONDO:0014605":null,"MONDO:0032697":null},"xrefs":{"Monarch":{"xref_id":"0957553"}}}


id: PATO:0001252
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of grey color and high brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grey","termid":"PATO:0000950"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"light grey","termid":"PATO:0001252"}


id: GO:1901305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of spermidine biosynthetic process.","definition_xrefs":["GOC:pm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of polyamine biosynthetic process","termid":"GO:0170066"},{"relation_name":"is_a","term_name":"regulation of spermidine biosynthetic process","termid":"GO:1901304"},{"relation_name":"negatively_regulates","term_name":"spermidine biosynthetic process","termid":"GO:0008295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of spermidine biosynthetic process","synonyms":[{"name":"down regulation of spermidine anabolism","type":"exact"},{"name":"down regulation of spermidine biosynthesis","type":"exact"},{"name":"down regulation of spermidine biosynthetic process","type":"exact"},{"name":"down regulation of spermidine formation","type":"exact"},{"name":"down regulation of spermidine synthesis","type":"exact"},{"name":"down-regulation of spermidine anabolism","type":"exact"},{"name":"down-regulation of spermidine biosynthesis","type":"exact"},{"name":"down-regulation of spermidine biosynthetic process","type":"exact"},{"name":"down-regulation of spermidine formation","type":"exact"},{"name":"down-regulation of spermidine synthesis","type":"exact"},{"name":"downregulation of spermidine anabolism","type":"exact"},{"name":"downregulation of spermidine biosynthesis","type":"exact"},{"name":"downregulation of spermidine biosynthetic process","type":"exact"},{"name":"downregulation of spermidine formation","type":"exact"},{"name":"downregulation of spermidine synthesis","type":"exact"},{"name":"inhibition of spermidine anabolism","type":"exact"},{"name":"inhibition of spermidine biosynthesis","type":"exact"},{"name":"inhibition of spermidine biosynthetic process","type":"narrow"},{"name":"inhibition of spermidine formation","type":"exact"},{"name":"inhibition of spermidine synthesis","type":"exact"},{"name":"negative regulation of spermidine anabolism","type":"exact"},{"name":"negative regulation of spermidine biosynthesis","type":"exact"},{"name":"negative regulation of spermidine formation","type":"exact"},{"name":"negative regulation of spermidine synthesis","type":"exact"}],"termid":"GO:1901305"}


id: PBO:0078074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocation associated membrane protein 1","termid":"PBO:0078074"}


id: PBO:0076983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 1","termid":"PBO:0076983"}


id: MONDO:0007922
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lymphedema - distichiasis is a rare syndromic lymphedema disorder characterized by lower-limb lymphedema and varying degrees of abnormal growth of eyelashes from the orifices of the Meibomian glands (distichiasis), with occasional associated manifestations.","definition_xrefs":["Orphanet:33001"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete eyebrow/eyelashes distichiasis (obsolete MONDO:0020190)","termid":"MONDO:0020190"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"lymphatic malformation","termid":"MONDO:0019313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphedema-distichiasis syndrome","secondary_identifiers":["UMLS:C0265345","ICD9:743.63","GARD:333","MEDGEN:75566","DOID:0111509","MESH:C537710","NCIT:C128191","ICD10CM:Q82.0","NORD:1383","OMIM:153400","SCTID:8634009"],"synonyms":[{"name":"hereditary lymphedema-distichiasis syndrome (subtype)","type":"related"},{"name":"lymphedema with distichiasis","type":"related"},{"name":"lymphedema-distichiasis syndrome","type":"exact"},{"name":"lymphedema-distichiasis syndrome with renal disease and diabetes mellitus","type":"related"}],"termid":"MONDO:0007922","xrefs":{"Monarch":{"xref_id":"0007922"}}}


id: GO:0006479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a methyl group to a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein alkylation","termid":"GO:0008213"},{"relation_name":"is_a","term_name":"macromolecule methylation","termid":"GO:0043414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein methylation","secondary_identifiers":["Reactome:R-HSA-8876725"],"synonyms":[{"name":"protein amino acid methylation","type":"exact"}],"termid":"GO:0006479"}


id: FYPO:0005555
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cohesin loading is decreased during the mitotic cell cycle. Cohesin loading is the topological linking of a cohesin ring complex to chromatin.","definition_xrefs":["PomBase:mah","GO:0061780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal regulation of molecular function","termid":"FYPO:0000682"},{"relation_name":"is_a","term_name":"abnormal cohesin loading","termid":"FYPO:0006479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased mitotic cohesin loading","synonyms":[{"name":"decreased cohesin loading during mitotic cell cycle","type":"exact"},{"name":"decreased cohesin loading during vegetative growth","type":"exact"},{"name":"decreased mitotic cohesin association with chromatin","type":"exact"},{"name":"decreased mitotic cohesin localization to chromatin","type":"exact"},{"name":"reduced mitotic cohesin loading","type":"exact"}],"termid":"FYPO:0005555"}


id: SO:1001264
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A recoded_mRNA where translation was suspended at a particular codon and resumed at a particular non-overlapping downstream codon.","direct_ancestors":[{"relation_name":"has_quality","term_name":"recoded_by_translational_bypass","termid":"SO:0000886"},{"relation_name":"is_a","term_name":"recoded_mRNA","termid":"SO:1001261"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA_recoded_by_translational_bypass","synonyms":[{"name":"mRNA recoded by translational bypass","type":"exact"}],"termid":"SO:1001264"}


id: PBO:0028850
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_phenotype","termid":"PBO:0028850"}


id: GO:0019860
data:
  {"annotated_genes":["SJAG_04354"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93788],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006223"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving uracil, 2,4-dioxopyrimidine, one of the pyrimidine bases occurring in RNA, but not in DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase metabolic process","termid":"GO:0006206"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04354":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"uracil metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"uracil metabolism","type":"exact"}],"termid":"GO:0019860","terms_by_termid":{"GO:0006223":null}}


id: PBO:0075119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 168","termid":"PBO:0075119"}


id: PBO:0004231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bouquet formation protein Bqt4","termid":"PBO:0004231"}


id: PBO:0027363
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_telomere-nuclear_envelope_distance_during_mitosis","termid":"PBO:0027363"}


id: GO:0008758
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + UDP-2,3-bis(3-hydroxymyristoyl)glucosamine = 2,3-bis(3-hydroxymyristoyl)-beta-D-glucosaminyl 1-phosphate + UMP.","definition_xrefs":["MetaCyc:LIPIDXSYNTHESIS-RXN","PMID:12000770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"UDP-2,3-diacylglucosamine hydrolase activity","secondary_identifiers":["RHEA:25213"],"termid":"GO:0008758"}


id: GO:0008954
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidoglycan synthetase activity (obsolete GO:0008954)","synonyms":[{"name":"peptidoglycan synthetase activity","type":"exact"}],"termid":"GO:0008954"}


id: GO:0061051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the growth of a cardiac muscle cell, where growth contributes to the progression of the cell over time from its initial formation to its mature state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cardiac muscle hypertrophy","termid":"GO:0010613"},{"relation_name":"is_a","term_name":"positive regulation of cell growth","termid":"GO:0030307"},{"relation_name":"is_a","term_name":"positive regulation of striated muscle cell differentiation","termid":"GO:0051155"},{"relation_name":"is_a","term_name":"positive regulation of cardiac muscle tissue growth","termid":"GO:0055023"},{"relation_name":"is_a","term_name":"regulation of cell growth involved in cardiac muscle cell development","termid":"GO:0061050"},{"relation_name":"positively_regulates","term_name":"cell growth involved in cardiac muscle cell development","termid":"GO:0061049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell growth involved in cardiac muscle cell development","termid":"GO:0061051"}


id: PBO:0065797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3H domain containing 4","termid":"PBO:0065797"}


id: PBO:0076309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptojanin 1","termid":"PBO:0076309"}


id: MONDO:0012717
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary hypomagnesemia in which the cause of the disease is a mutation in the EGF gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial primary hypomagnesemia with normocalciuria and normocalcemia","termid":"MONDO:0018101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005240"],"is_obsolete":false,"name":"renal hypomagnesemia 4","secondary_identifiers":["MESH:C567127","UMLS:C2673648","MEDGEN:388692","OMIM:611718","DOID:0060882"],"synonyms":[{"name":"EGF familial primary hypomagnesemia","type":"exact"},{"name":"EGF primary hypomagnesemia","type":"exact"},{"name":"HOMG4","type":"exact"},{"name":"familial primary hypomagnesemia caused by mutation in EGF","type":"exact"},{"name":"hypomagnesemia 4, renal","type":"related"},{"name":"hypomagnesemia, renal, Normocalciuric","type":"related"},{"name":"primary hypomagnesemia caused by mutation in EGF","type":"exact"},{"name":"renal hypomagnesemia type 4","type":"exact"}],"termid":"MONDO:0012717","xrefs":{"Monarch":{"xref_id":"0012717"}}}


id: GO:0046553
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-malate + NAD+ = CO2 + NADH + pyruvate.","definition_xrefs":["RHEA:18365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malate dehydrogenase activity","termid":"GO:0016615"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"D-malate dehydrogenase (decarboxylating) (NAD+) activity","secondary_identifiers":["KEGG_REACTION:R00215","EC:1.1.1.83","MetaCyc:1.1.1.83-RXN"],"synonyms":[{"name":"(R)-malate:NAD+ oxidoreductase (decarboxylating)","type":"related"},{"name":"D-malate dehydrogenase activity","type":"related"},{"name":"D-malic enzyme","type":"related"},{"name":"bifunctional L(+)-tartrate dehydrogenase-D(+)-malate (decarboxylating)","type":"related"}],"termid":"GO:0046553"}


id: GO:0003806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the selective cleavage of Arg-Ile bonds in factor VII to form factor VIIa and factor XI to form factor XIa.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete coagulation factor XIIa activity (obsolete GO:0003806)","synonyms":[{"name":"activated beta blood-coagulation factor XII","type":"related"},{"name":"blood coagulation factor XII activity","type":"exact"},{"name":"blood-coagulation factor XIIabeta","type":"related"},{"name":"blood-coagulation factor XIIf","type":"related"},{"name":"coagulation factor XIIa activity","type":"exact"},{"name":"hageman factor (activated)","type":"related"},{"name":"hageman factor activity","type":"related"},{"name":"hageman factor beta-fragment","type":"related"},{"name":"hageman factor fragment HFf","type":"related"},{"name":"kallikreinogen activator","type":"related"},{"name":"prealbumin activator","type":"related"},{"name":"prekallikrein activator","type":"related"}],"termid":"GO:0003806"}


id: PBO:0067256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 330, pseudogene","termid":"PBO:0067256"}


id: PBO:0026991
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_galactose:mannose_ratio_in_glycoprotein_glycan","termid":"PBO:0026991"}


id: GO:0035544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of assembly of the SNARE complex. The SNARE complex is a protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"negative regulation of vesicle fusion","termid":"GO:0031339"},{"relation_name":"is_a","term_name":"regulation of SNARE complex assembly","termid":"GO:0035542"},{"relation_name":"negatively_regulates","term_name":"SNARE complex assembly","termid":"GO:0035493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0044085","GO:0065003","GO:0006810","GO:0061024"],"is_obsolete":false,"name":"negative regulation of SNARE complex assembly","termid":"GO:0035544"}


id: GO:0004375
data:
  {"annotated_genes":["SJAG_03861"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75913],"is_not":false,"summary":null,"term":"GO:0004375"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N(6)-[(R)-lipoyl]-L-lysyl-[glycine-cleavage complex H protein] + glycine + H+ = N(6)-[(R)-S(8)-aminomethyldihydrolipoyl]-L-lysyl-[glycine-cleavage complex H protein] + CO2.","definition_xrefs":["RHEA:24304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor","termid":"GO:0016642"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03861":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"glycine dehydrogenase (decarboxylating) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-5693967","EC:1.4.4.2","MetaCyc:GCVP-RXN"],"synonyms":[{"name":"P-protein","type":"narrow"},{"name":"glycine cleavage system P-protein activity","type":"narrow"},{"name":"glycine decarboxylase activity","type":"related"},{"name":"glycine-cleavage complex","type":"related"},{"name":"glycine-cleavage complex P-protein activity","type":"related"},{"name":"glycine:H-protein-lipoyllysine oxidoreductase (decarboxylating, acceptor-amino-methylating)","type":"related"},{"name":"glycine:lipoylprotein oxidoreductase (decarboxylating and acceptor-aminomethylating)","type":"related"},{"name":"protein P1","type":"narrow"}],"termid":"GO:0004375","terms_by_termid":{"GO:0004375":null}}


id: FYPO:0004080
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which phosphorylation of serine at position 10 of histone H3 is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone phosphorylation during vegetative growth","termid":"FYPO:0002591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased histone H3-S10 phosphorylation during vegetative growth","synonyms":[{"name":"increased histone H3 phosphorylation at S10 during vegetative growth","type":"exact"},{"name":"increased histone H3-S10 phosphorylation during mitotic cell cycle","type":"related"},{"name":"increased histone H3S10 phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004080"}


id: GO:0021784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the postganglionic portion of the parasympathetic fiber over time, from its formation to the mature structure. The parasympathetic fiber is one of the two divisions of the vertebrate autonomic nervous system. Parasympathetic nerves emerge cranially as pre ganglionic fibers from oculomotor, facial, glossopharyngeal and vagus and from the sacral region of the spinal cord. Most neurons are cholinergic and responses are mediated by muscarinic receptors. The parasympathetic system innervates, for example: salivary glands, thoracic and abdominal viscera, bladder and genitalia.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:dgh","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autonomic nervous system development","termid":"GO:0048483"},{"relation_name":"part_of","term_name":"peripheral nervous system development","termid":"GO:0007422"},{"relation_name":"part_of","term_name":"parasympathetic nervous system development","termid":"GO:0048486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"postganglionic parasympathetic fiber development","termid":"GO:0021784"}


id: PBO:0086383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ATP-dependent RNA helicase of the DEAD-box protein family; constituent of 66S pre-ribosomal particles; essential protein involved in ribosome biogenesis","termid":"PBO:0086383"}


id: GO:0004728
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Conveys a signal from an upstream receptor or intracellular signal transducer by catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate.","definition_xrefs":["EC:3.1.3.48"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transducer, downstream of receptor, with protein tyrosine phosphatase activity (obsolete GO:0004728)","synonyms":[{"name":"receptor signaling protein tyrosine phosphatase activity","type":"exact"},{"name":"receptor signalling protein tyrosine phosphatase activity","type":"exact"}],"termid":"GO:0004728"}


id: GO:0002081
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The acrosomal membrane region that underlies the plasma membrane of the sperm. This membrane fuses with the sperm plasma membrane as part of the acrosome reaction.","definition_xrefs":["PMID:8936405","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"part_of","term_name":"acrosomal membrane","termid":"GO:0002080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"outer acrosomal membrane","termid":"GO:0002081"}


id: GO:1990281
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is capable of efflux transmembrane transporter activity.","definition_xrefs":["GOC:dos","PMID:21556065","PMID:9417051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"efflux pump complex","synonyms":[{"name":"efflux pump","type":"exact"},{"name":"efflux transmembrane transporter complex","type":"exact"}],"termid":"GO:1990281"}


id: GO:0102465
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: zeaxanthin + 2 NADH + 2 H+ + 2 O2 = nostoxanthin + 2 NAD + 2 H2O.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"zeaxanthin 2,2'-beta-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-14018"],"termid":"GO:0102465"}


id: MONDO:0014694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive spondylocostal dysostosis in which the cause of the disease is a mutation in the RIPPLY2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive spondylocostal dysostosis","termid":"MONDO:0010180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025","MONDO:0005497","MONDO:0024322"],"is_obsolete":false,"name":"spondylocostal dysostosis 6, autosomal recessive","secondary_identifiers":["DOID:0112360","UMLS:C4225279","GARD:12807","MEDGEN:899713","OMIM:616566"],"synonyms":[{"name":"RIPPLY2 autosomal recessive spondylocostal dysostosis","type":"exact"},{"name":"SCDO6","type":"related"},{"name":"autosomal recessive spondylocostal dysostosis caused by mutation in RIPPLY2","type":"exact"},{"name":"spondylocostal dysostosis 6","type":"related"},{"name":"spondylocostal dysostosis 6, autosomal recessive","type":"exact"}],"termid":"MONDO:0014694","xrefs":{"Monarch":{"xref_id":"0014694"}}}


id: SO:0001128
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A reversal in the direction of the backbone of a protein that is stabilized by hydrogen bond between backbone NH and CO groups, involving no more than 4 amino acid residues.","definition_xrefs":["uniprot:feature_type","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_turn_motif","secondary_identifiers":["BS:00148"],"synonyms":[{"name":"turn","type":"related"}],"termid":"SO:0001128"}


id: GO:0039517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a virus effects a change in host protein serine/threonine phosphatase activity.","definition_xrefs":["GOC:sp","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host protein serine/threonine phosphatase activity (obsolete GO:0039517)","synonyms":[{"name":"modulation by virus of protein serine/threonine phosphatase activity in host","type":"exact"},{"name":"regulation by virus of host protein serine/threonine phosphatase activity","type":"exact"}],"termid":"GO:0039517"}


id: MONDO:0060491
data:
  {"annotated_genes":["SJAG_02233"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88513],"is_not":false,"summary":null,"term":"MONDO:0060491"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02233":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with involuntary movements","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1374697","OMIM:617493","DOID:0112276","GARD:16232","UMLS:C4479569"],"synonyms":[{"name":"NEDIM","type":"related"},{"name":"neurodevelopmental disorder with involuntary movements","type":"exact"}],"termid":"MONDO:0060491","terms_by_termid":{"MONDO:0060491":null},"xrefs":{"Monarch":{"xref_id":"0060491"}}}


id: GO:0050598
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADPH + O2 + taxa-4(20),11-dien-5alpha-ol = H2O + NADP+ + taxa-4(20),11-dien-5alpha,13alpha-diol.","definition_xrefs":["RHEA:18949","EC:1.14.14.106"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"taxane 13-alpha-hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R06308","MetaCyc:1.14.13.77-RXN"],"synonyms":[{"name":"taxa-4(20),11-dien-5alpha-ol,NADPH:oxygen oxidoreductase (13alpha-hydroxylating)","type":"related"},{"name":"taxane 13a-hydroxylase activity","type":"exact"},{"name":"taxane 13alpha-hydroxylase activity","type":"related"}],"termid":"GO:0050598"}


id: PBO:0046480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERCC excision repair 5, endonuclease","termid":"PBO:0046480"}


id: MONDO:0010904
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"setting-Sun phenomenon, familial benign","secondary_identifiers":["MEDGEN:318913","OMIM:600598","UMLS:C1833577","MESH:C563470"],"synonyms":[{"name":"setting-Sun phenomenon, familial benign","type":"exact"}],"termid":"MONDO:0010904","xrefs":{"Monarch":{"xref_id":"0010904"}}}


id: PBO:0060984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neugrin, neurite outgrowth associated","termid":"PBO:0060984"}


id: GO:1901885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2-hydroxybenzoyl-CoA.","definition_xrefs":["GOC:TermGenie","PMID:19757094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA metabolic process","termid":"GO:0006637"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"2-hydroxybenzoyl-CoA metabolic process","synonyms":[{"name":"2-hydroxybenzoyl-CoA metabolism","type":"exact"}],"termid":"GO:1901885"}


id: GO:0032330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chondrocyte differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"is_a","term_name":"regulation of cartilage development","termid":"GO:0061035"},{"relation_name":"regulates","term_name":"chondrocyte differentiation","termid":"GO:0002062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of chondrocyte differentiation","termid":"GO:0032330"}


id: MONDO:0015974
data:
  {"annotated_genes":["SJAG_02527","SJAG_04199","SJAG_02038","SJAG_00677","SJAG_05024"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012650"},{"annotations":[88880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011686"},{"annotations":[87430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009973"},{"annotations":[87683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014168"},{"annotations":[88239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014391"}]},"cv_name":"mondo","definition":"Severe combined immunodeficiency (SCID) comprises a group of rare monogenic primary immunodeficiency disorders characterized by a lack of functional peripheral T lymphocytes resulting in early-onset severe respiratory infections and failure to thrive. They are classified according to immunological phenotype into SCID with absence of T cells but presence of B cells (T-B+ SCID) or SCID with absence of both (T-B- SCID). Both of these groups include several forms, with or without natural killer (NK) cells.","definition_xrefs":["Orphanet:183660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined immunodeficiency","termid":"MONDO:0015131"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00677":null,"SJAG_02038":null,"SJAG_02527":null,"SJAG_04199":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"severe combined immunodeficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["HP:0004430","DOID:627","NORD:1706","SCTID:31323000","UMLS:C0085110","icd11.foundation:963193284","GARD:7628","MedDRA:10069566","MESH:D016511","NCIT:C3472","MEDGEN:88328"],"synonyms":[{"name":"SCID","type":"exact"},{"name":"combined T and B cell inborn immunodeficiency","type":"exact"},{"name":"severe combined immunodeficiency","type":"exact"},{"name":"severe combined immunodeficiency (disease)","type":"exact"},{"name":"severe combined immunodeficiency disease","type":"exact"}],"termid":"MONDO:0015974","terms_by_termid":{"MONDO:0009973":null,"MONDO:0011686":null,"MONDO:0012650":null,"MONDO:0014168":null,"MONDO:0014391":null},"xrefs":{"Monarch":{"xref_id":"0015974"}}}


id: GO:0030628
data:
  {"annotated_genes":["SJAG_03995","SJAG_01200","SJAG_00225"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57830,73944,78373],"is_not":false,"summary":null,"term":"GO:0030628"}]},"cv_name":"molecular_function","definition":"Binding to a pre-mRNA 3' splice site sequence.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-mRNA binding","termid":"GO:0036002"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00225":null,"SJAG_01200":null,"SJAG_03995":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"pre-mRNA 3'-splice site binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"pre-mRNA 3' splice site binding","type":"exact"}],"termid":"GO:0030628","terms_by_termid":{"GO:0030628":null}}


id: PBO:0016911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein Mug94","termid":"PBO:0016911"}


id: MONDO:1011813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcoid, non-human animal","secondary_identifiers":["OMIA:000888"],"termid":"MONDO:1011813","xrefs":{"Monarch":{"xref_id":"1011813"}}}


id: PBO:0002049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP-associated protein Aar2 (predicted)","termid":"PBO:0002049"}


id: PBO:0000137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein","termid":"PBO:0000137"}


id: MONDO:0003195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, serous adenocarcinoma that arises from the lining of the peritoneum. It affects females. The clinical behavior and pathologic characteristics are similar to the serous adenocarcinoma that arises from the ovary.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peritoneal carcinoma","termid":"MONDO:0002113"},{"relation_name":"is_a","term_name":"serous adenocarcinoma","termid":"MONDO:0005278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"peritoneal serous adenocarcinoma","secondary_identifiers":["NCIT:C40023","DOID:4901"],"synonyms":[{"name":"peritoneum serous adenocarcinoma","type":"exact"},{"name":"primary peritoneal serous adenocarcinoma","type":"narrow"}],"termid":"MONDO:0003195","xrefs":{"Monarch":{"xref_id":"0003195"}}}


id: GO:0052434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of any form of cell-based immune response of a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont cell-mediated immune response (obsolete GO:0052434)","synonyms":[{"name":"modulation by organism of symbiont cell-based immune response","type":"exact"},{"name":"modulation by organism of symbiont cell-mediated immune response","type":"exact"}],"termid":"GO:0052434"}


id: PBO:0038387
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_active_ingredient","termid":"PBO:0038387"}


id: PBO:0066667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIPOR3 antisense RNA 1","termid":"PBO:0066667"}


id: FYPO:0001919
data:
  {"alleles_by_uniquename":{"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121064],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0003976"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the nucleus is broken into multiple small fragments that are smaller than a normal nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear morphology during vegetative growth","termid":"FYPO:0000062"},{"relation_name":"is_a","term_name":"fragmented nucleus","termid":"FYPO:0006661"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04464":null},"genotype_count":1,"genotypes_by_uniquename":{"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0002403","FYPO:0005447"],"is_obsolete":false,"name":"fragmented nucleus during vegetative growth","references_by_uniquename":{"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_04464"],"single_locus_genotype_uniquenames":["pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"fragmented nuclear DNA during vegetative growth","type":"related"},{"name":"fragmented nucleus during mitotic cell cycle","type":"related"},{"name":"loss of nuclear integrity during vegetative growth","type":"related"}],"termid":"FYPO:0001919","terms_by_termid":{"FYECO:0000004":null,"FYPO:0003976":null}}


id: PBO:0078940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCT) 7-1","termid":"PBO:0078940"}


id: PBO:0033759
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_exit_from_meiosis","termid":"PBO:0033759"}


